View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16248_high_17 (Length: 218)
Name: NF16248_high_17
Description: NF16248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16248_high_17 |
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Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 21 - 202
Target Start/End: Original strand, 22044878 - 22045059
Alignment:
| Q |
21 |
taaactaaagaatttgtatatattataagtctttgagaagtacagaccgaaccaaatggaaaatagggaaaagtaccatgtagaataatgattataagtt |
120 |
Q |
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| T |
22044878 |
taaactaaagaatctgtatatattataagtctttgagaactacagaccgaaccaaatggaaaatagggaaaagtactatgtagaataatgattataagtt |
22044977 |
T |
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| Q |
121 |
agataagtttacatacatagtaaattaattgagaaagaaattagcaagcataagattcctgtgatatactttcaatggtcat |
202 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
22044978 |
agctaagtttacatacatagtaaattaattgagaaagaaattagcaagcataagattcctgtaatatactttcaatggtcat |
22045059 |
T |
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