View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16248_high_19 (Length: 207)
Name: NF16248_high_19
Description: NF16248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16248_high_19 |
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Alignment Details
Target: chr8 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 4620754 - 4620886
Alignment:
| Q |
1 |
acaaagaaacaaaacaatatctaacgatcatatacatacaatcgcttacgagtcgggacgatacgaaattgaagaaaaagaaagcttgccctggaaggaa |
100 |
Q |
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| T |
4620754 |
acaaagaaacaaaacaatatctaacgatcatatacatacaatcgcttacgagtcgggacgatacgaaattgaagaaaaagaaagcttgccctggaaggaa |
4620853 |
T |
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| Q |
101 |
gagaaatattgtagagaggagcagattggttcc |
133 |
Q |
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|||||| |||||||||||||||||||||||||| |
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| T |
4620854 |
gagaaagattgtagagaggagcagattggttcc |
4620886 |
T |
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