View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16248_low_16 (Length: 238)
Name: NF16248_low_16
Description: NF16248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16248_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 36732915 - 36733076
Alignment:
| Q |
13 |
catcatcctcagcgataagacaataatagaagtgcgattaac-----ttgcgaatttcaacctcaccacaaattcttaaaattttgttattttagaaatc |
107 |
Q |
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| T |
36732915 |
catcatacttagcgataagacaata---gaagtgcgattaacgtaacttgcgaatttcaacctcaccacaaattcttgaaattttgttattttagaaatc |
36733011 |
T |
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| Q |
108 |
cttcctaatgagcttgatagtctttcctttaatgatatttttgaatttacatgcttaaaaatatt |
172 |
Q |
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| T |
36733012 |
cctcctaatgagcttgatagtctttcttttaatgatatttttgaatttacatgcttaaaaatatt |
36733076 |
T |
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