View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16248_low_19 (Length: 213)
Name: NF16248_low_19
Description: NF16248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16248_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 45284206 - 45284382
Alignment:
| Q |
16 |
ataatactaattggactatatacatagatagatatctaattaattcatgatttttatgtcattattgttacacttttatttgtatgccagcgtgactatg |
115 |
Q |
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| T |
45284206 |
ataatactaattggactatatacatagatagatatctaattaattcatgatttttatgtcattattgtcacacttttatttgtatgccagcgtgactatg |
45284305 |
T |
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| Q |
116 |
aaaaagagattgaggatttgacaacggaattggccagctacaaggtgcaattagaagcaaagcatgttgcacacatc |
192 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45284306 |
aaaaagagattgaggatttgacaacggaattggccagctacaaggtgcaattagaagcaaagcatgttgcacacatc |
45284382 |
T |
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