View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1624_high_22 (Length: 325)
Name: NF1624_high_22
Description: NF1624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1624_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 10 - 309
Target Start/End: Original strand, 32507555 - 32507854
Alignment:
| Q |
10 |
attatactgattttcttcaaaaggtaataattatttttcctaaatagaccaaatgttgtgatactacacagtaatccgatgaacttcgcttagtttatac |
109 |
Q |
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| T |
32507555 |
attatattgattttcttcaaaaggtaataattatttttcctaaatagaccaaatgttgtgatactacacagtaatccaatgaacttcgcttagtttatac |
32507654 |
T |
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| Q |
110 |
aacttatagagtatgtaatgtacaatgttaatcttatatagattatgtgatgtacaatgttaatcttaatcttataatgtcatgttggtataatataagt |
209 |
Q |
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||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
32507655 |
aacttatagagtatgtaatgtacaatgttaatcttgtatagagtatgtgaggtacaatgttattcttaatcttataatgtcatgttggtataatataagt |
32507754 |
T |
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| Q |
210 |
gtacaacttctagaaaataattgatattagtgtacaatttcacacatgatttttgaaaagaatggttgattgttgcacaggctcaaccagatattgcatg |
309 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32507755 |
gtacaacttctagaaaataattgatattagtgtacaatttcacacatgatttttgaaaagaatggttgattgttgcacaggctcagccagatattgcatg |
32507854 |
T |
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