View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1624_high_32 (Length: 293)

Name: NF1624_high_32
Description: NF1624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1624_high_32
NF1624_high_32
[»] chr4 (37 HSPs)
chr4 (53-280)||(33728825-33729051)
chr4 (45-167)||(11974809-11974933)
chr4 (45-124)||(3729299-3729380)
chr4 (45-135)||(9162916-9163008)
chr4 (9-57)||(33727931-33727979)
chr4 (45-128)||(38001258-38001343)
chr4 (120-184)||(11974740-11974804)
chr4 (45-124)||(5524836-5524917)
chr4 (62-126)||(44814350-44814414)
chr4 (84-132)||(49358014-49358062)
chr4 (135-194)||(3729487-3729546)
chr4 (138-181)||(9162656-9162699)
chr4 (45-124)||(12216773-12216855)
chr4 (134-181)||(38001450-38001497)
chr4 (58-125)||(44673450-44673517)
chr4 (138-181)||(54198323-54198366)
chr4 (45-135)||(12214795-12214885)
chr4 (44-126)||(12216655-12216740)
chr4 (92-133)||(6385206-6385247)
chr4 (91-128)||(54198471-54198508)
chr4 (84-132)||(11064721-11064769)
chr4 (97-133)||(22160650-22160686)
chr4 (97-133)||(23316199-23316235)
chr4 (97-133)||(50996346-50996382)
chr4 (84-135)||(43317405-43317456)
chr4 (62-124)||(9162809-9162871)
chr4 (62-135)||(23432023-23432094)
chr4 (45-135)||(26005810-26005899)
chr4 (97-135)||(34857805-34857843)
chr4 (138-180)||(44814515-44814557)
chr4 (97-135)||(54162524-54162562)
chr4 (90-135)||(4959133-4959178)
chr4 (133-194)||(12216960-12217021)
chr4 (82-135)||(29096829-29096882)
chr4 (92-133)||(44469165-44469206)
chr4 (103-135)||(5661903-5661935)
chr4 (97-133)||(25921275-25921311)
[»] chr6 (18 HSPs)
chr6 (45-184)||(2438876-2439017)
chr6 (53-194)||(3676296-3676437)
chr6 (45-167)||(17590000-17590124)
chr6 (48-132)||(35219454-35219540)
chr6 (53-135)||(10927706-10927788)
chr6 (138-184)||(23915527-23915573)
chr6 (139-184)||(16316693-16316738)
chr6 (138-194)||(10927873-10927929)
chr6 (138-194)||(32249953-32250009)
chr6 (80-135)||(11323119-11323174)
chr6 (138-184)||(2537063-2537109)
chr6 (97-133)||(13846835-13846871)
chr6 (125-168)||(17589947-17589990)
chr6 (44-124)||(32250119-32250201)
chr6 (81-135)||(16186836-16186890)
chr6 (84-133)||(14894645-14894694)
chr6 (100-136)||(23124232-23124268)
chr6 (44-128)||(27902139-27902228)
[»] chr3 (43 HSPs)
chr3 (62-184)||(22176411-22176533)
chr3 (84-185)||(22101488-22101589)
chr3 (45-134)||(42897030-42897121)
chr3 (45-135)||(18722383-18722473)
chr3 (134-183)||(22833295-22833344)
chr3 (45-128)||(3422811-3422896)
chr3 (138-184)||(35863704-35863750)
chr3 (45-136)||(51834116-51834208)
chr3 (53-128)||(3424693-3424768)
chr3 (44-124)||(28096096-28096178)
chr3 (53-124)||(51139766-51139837)
chr3 (45-124)||(7116151-7116232)
chr3 (89-135)||(23251379-23251425)
chr3 (138-184)||(35369082-35369128)
chr3 (82-135)||(27003988-27004041)
chr3 (46-124)||(44821913-44821993)
chr3 (97-133)||(3806959-3806995)
chr3 (84-135)||(22101797-22101849)
chr3 (140-184)||(22101935-22101979)
chr3 (140-184)||(22176882-22176926)
chr3 (138-194)||(28096294-28096350)
chr3 (97-133)||(33706370-33706406)
chr3 (97-133)||(37980587-37980623)
chr3 (97-133)||(44176748-44176784)
chr3 (97-133)||(44183430-44183466)
chr3 (84-124)||(53359345-53359385)
chr3 (84-135)||(13875272-13875323)
chr3 (84-135)||(35378870-35378921)
chr3 (100-135)||(35938669-35938704)
chr3 (92-135)||(51834009-51834052)
chr3 (45-124)||(7116280-7116361)
chr3 (134-180)||(7116593-7116639)
chr3 (97-135)||(18195354-18195392)
chr3 (45-133)||(21078410-21078497)
chr3 (97-135)||(22100633-22100671)
chr3 (97-135)||(22175572-22175610)
chr3 (70-124)||(44822061-44822115)
chr3 (139-180)||(34492078-34492119)
chr3 (63-128)||(35368911-35368976)
chr3 (83-135)||(2368782-2368834)
chr3 (60-124)||(7116740-7116804)
chr3 (91-135)||(28391097-28391141)
chr3 (95-135)||(35863918-35863958)
[»] chr5 (24 HSPs)
chr5 (48-179)||(28221923-28222056)
chr5 (45-133)||(38938768-38938858)
chr5 (44-128)||(38939034-38939120)
chr5 (91-181)||(3160884-3160973)
chr5 (45-135)||(7464327-7464418)
chr5 (48-128)||(1190213-1190295)
chr5 (84-135)||(28766089-28766140)
chr5 (45-135)||(24007256-24007346)
chr5 (51-134)||(24836523-24836606)
chr5 (84-135)||(28604266-28604317)
chr5 (92-135)||(38697210-38697253)
chr5 (138-184)||(28263846-28263892)
chr5 (45-135)||(35271880-35271970)
chr5 (97-133)||(28394394-28394430)
chr5 (97-133)||(31172026-31172062)
chr5 (97-133)||(41875167-41875203)
chr5 (92-135)||(33628936-33628979)
chr5 (44-135)||(43369888-43369979)
chr5 (97-135)||(19126415-19126453)
chr5 (53-122)||(3160972-3161041)
chr5 (53-122)||(38938917-38938986)
chr5 (84-136)||(13577594-13577646)
chr5 (44-124)||(19514314-19514394)
chr5 (97-133)||(27263566-27263602)
[»] chr7 (25 HSPs)
chr7 (48-181)||(9329605-9329739)
chr7 (45-128)||(11321451-11321536)
chr7 (141-194)||(9302210-9302263)
chr7 (141-194)||(9306648-9306701)
chr7 (80-128)||(39675495-39675543)
chr7 (46-128)||(9302015-9302099)
chr7 (46-128)||(9306453-9306537)
chr7 (48-137)||(21094239-21094328)
chr7 (84-124)||(47911929-47911969)
chr7 (84-135)||(27723121-27723172)
chr7 (53-124)||(41755609-41755680)
chr7 (97-133)||(5096248-5096284)
chr7 (53-121)||(20479926-20479994)
chr7 (97-133)||(39753327-39753363)
chr7 (84-135)||(20045156-20045207)
chr7 (84-135)||(27725002-27725053)
chr7 (82-133)||(44485484-44485535)
chr7 (44-128)||(45022631-45022717)
chr7 (53-124)||(47220819-47220890)
chr7 (138-184)||(20621278-20621324)
chr7 (97-135)||(21093843-21093881)
chr7 (89-134)||(6475004-6475049)
chr7 (97-133)||(2275215-2275251)
chr7 (84-136)||(8949223-8949275)
chr7 (138-194)||(35492182-35492238)
[»] chr2 (24 HSPs)
chr2 (53-153)||(44973084-44973184)
chr2 (45-124)||(25048153-25048234)
chr2 (62-135)||(7061709-7061781)
chr2 (53-124)||(44539702-44539773)
chr2 (134-184)||(35193461-35193511)
chr2 (45-124)||(35193622-35193702)
chr2 (60-124)||(2221910-2221974)
chr2 (53-135)||(8063236-8063316)
chr2 (84-135)||(19901609-19901660)
chr2 (84-135)||(21956528-21956579)
chr2 (138-184)||(309852-309898)
chr2 (97-135)||(3357944-3357982)
chr2 (81-135)||(13596284-13596338)
chr2 (81-135)||(40633658-40633712)
chr2 (84-133)||(36214051-36214100)
chr2 (134-194)||(7061863-7061923)
chr2 (97-133)||(40324110-40324146)
chr2 (137-184)||(43528443-43528490)
chr2 (138-184)||(25047963-25048009)
chr2 (82-124)||(43528298-43528340)
chr2 (81-134)||(629399-629452)
chr2 (139-184)||(13594520-13594565)
chr2 (97-133)||(2383383-2383419)
chr2 (138-194)||(44539542-44539598)
[»] chr8 (20 HSPs)
chr8 (45-135)||(32889013-32889105)
chr8 (62-124)||(26528051-26528112)
chr8 (134-183)||(5592720-5592769)
chr8 (53-135)||(21307357-21307437)
chr8 (50-128)||(32889137-32889217)
chr8 (81-135)||(15898613-15898667)
chr8 (90-135)||(28773440-28773485)
chr8 (97-133)||(1658202-1658238)
chr8 (97-133)||(6336149-6336185)
chr8 (97-133)||(14031494-14031530)
chr8 (95-135)||(33480667-33480707)
chr8 (97-133)||(37401950-37401986)
chr8 (80-135)||(1759784-1759839)
chr8 (100-135)||(19369046-19369081)
chr8 (46-133)||(26527918-26528005)
chr8 (97-135)||(22438830-22438868)
chr8 (97-135)||(28969873-28969911)
chr8 (97-133)||(24023612-24023648)
chr8 (48-124)||(24432049-24432125)
chr8 (97-133)||(36802170-36802206)
[»] chr1 (28 HSPs)
chr1 (45-126)||(29699359-29699442)
chr1 (62-135)||(50231372-50231445)
chr1 (134-184)||(14494794-14494844)
chr1 (62-135)||(8095977-8096048)
chr1 (45-124)||(8528022-8528103)
chr1 (46-128)||(43575365-43575449)
chr1 (46-135)||(43577183-43577272)
chr1 (84-135)||(24162672-24162723)
chr1 (138-184)||(29699206-29699252)
chr1 (90-135)||(11977982-11978027)
chr1 (138-183)||(50231535-50231580)
chr1 (97-133)||(8028417-8028453)
chr1 (138-194)||(8528223-8528279)
chr1 (47-135)||(37706257-37706345)
chr1 (44-124)||(48995722-48995802)
chr1 (53-124)||(14494626-14494697)
chr1 (45-124)||(4393-4474)
chr1 (138-184)||(237180-237225)
chr1 (97-135)||(11407087-11407125)
chr1 (85-135)||(14245791-14245841)
chr1 (81-135)||(16143683-16143737)
chr1 (84-133)||(8007233-8007282)
chr1 (82-135)||(31844895-31844948)
chr1 (50-135)||(37231304-37231389)
chr1 (99-135)||(4972557-4972593)
chr1 (91-135)||(17605601-17605645)
chr1 (43-135)||(46879850-46879942)
chr1 (84-135)||(52043057-52043109)
[»] scaffold0123 (1 HSPs)
scaffold0123 (45-124)||(17395-17476)
[»] scaffold0025 (1 HSPs)
scaffold0025 (139-194)||(3507-3562)
[»] scaffold0066 (2 HSPs)
scaffold0066 (138-184)||(56469-56515)
scaffold0066 (84-129)||(56329-56374)
[»] scaffold0143 (1 HSPs)
scaffold0143 (95-135)||(5973-6013)
[»] scaffold0035 (1 HSPs)
scaffold0035 (97-133)||(82119-82155)
[»] scaffold0086 (1 HSPs)
scaffold0086 (107-135)||(48348-48376)


Alignment Details
Target: chr4 (Bit Score: 143; Significance: 4e-75; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 53 - 280
Target Start/End: Original strand, 33728825 - 33729051
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatagtcaattataaaataac 152  Q
    |||||||||||||||| || |||||| ||| |||| ||| | |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  33728825 tatatataaaaaactatccctttcaacacacttttgggtaggaattttcttttcaaaaatatccttaattttaaatacaaatagtcaattataaaataac 33728924  T
Q  153 acgtggattaataatcaatgtcactaatcgtcattgttaaccnnnnnnnaacaccgttaatcagatcaaagtaacaaaaagtttaaaaattatatttgca 252  Q
    ||||  ||||||||| ||||||| ||||||||| |||||| |       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33728925 acgtaaattaataat-aatgtcattaatcgtcactgttaatcttctcttaacaccgttaatcagatcaaagtaacaaaaagtttaaaaattatatttgca 33729023  T
Q  253 ttctttatgtctcttctcatgaattcaa 280  Q
    ||||||||||||||||||||||||||||    
T  33729024 ttctttatgtctcttctcatgaattcaa 33729051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 167
Target Start/End: Complemental strand, 11974933 - 11974809
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatagtcaatt 142  Q
    ||||||||||||||||||  ||||||||| |||||  | |  ||| ||||||| |||||||| | ||||||||||||||||||| ||||||||| |||||    
T  11974933 atctatactatatataaagaaaactacccctttcagcatacatttgggttgaacttttcttttccaaaatacccttaattttaattacaaatagccaatt 11974834  T
Q  143 ataaaataacacgtggattaataat 167  Q
    | |||||||||||||||||| ||||    
T  11974833 acaaaataacacgtggattagtaat 11974809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 3729299 - 3729380
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||||||||||||||  |||||| ||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||    
T  3729299 atctatactatatataaagaaaactatccatttcaacacacttttgggttggaattttctttccaaaaatacccttaatttt 3729380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 9163008 - 9162916
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||||||||||  |||||||||  ||||  ||| |||| ||||| | |||||||||||||||||||||||||||||||||||||||    
T  9163008 atctatactatatataaagaaaactaccccgttcagcacacttttcggttggacttttctttccaaaaatacccttaattttaaatacaaata 9162916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 33727931 - 33727979
Alignment:
Q  9 caaatcttaatggtcttattttattttatttttggaatctatactatat 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33727931 caaatcttaatggtcttattttattttatttttggaatctatactatat 33727979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 38001258 - 38001343
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    ||||||||||||||||||  |||||  || |||||| ||| |||| ||||| |||||||||| |||||||||||||||||||||||    
T  38001258 atctatactatatataaagaaaactgtccctttcaacacacttttgggttggaattttcttttcaaaaatacccttaattttaaat 38001343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 11974804 - 11974740
Alignment:
Q  120 attttaaatacaaatagtcaattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||||  ||| |||||||||||    
T  11974804 attttaaatacaaatagccaattataaaataacacatggattagtaattcatgccactaatcgtc 11974740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 5524836 - 5524917
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||| ||||||||||  ||||||||| |||||  ||| |||| ||||| | ||||||||||||||||||||||||||||    
T  5524836 atctatattatatataaagaaaactacccctttcagcacacttttgggttgtacttttctttccaaaaatacccttaatttt 5524917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 44814350 - 44814414
Alignment:
Q  62 aaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaa 126  Q
    |||||||||| |||||  ||| |||| ||| ||| ||||||||||||||||||||||||||||||    
T  44814350 aaaactacccttttcagcacacttttgggtagaacttttctttccaaaaatacccttaattttaa 44814414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 49358014 - 49358062
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaa 132  Q
    |||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  49358014 ttttgggttggacttttctttccaaaaatacccttaattttaaatacaa 49358062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 3729487 - 3729546
Alignment:
Q  135 agtcaattataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    ||||||||||||||||||| |||||||| ||||  |||||||||||||||  ||||||||    
T  3729487 agtcaattataaaataacatgtggattactaatacatgtcactaatcgtccatgttaacc 3729546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 9162699 - 9162656
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatc 181  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  9162699 caattataaaataacacgtggattaataatccatgtcattaatc 9162656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 12216773 - 12216855
Alignment:
Q  45 atctatactatatat--aaaaaactacccatttcaataca-tttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||||||||||||  |||||||||||| |||||  ||| |||||| |||| || ||||||| |||||||||||||||||||    
T  12216773 atctatactatatattaaaaaaactacccctttcagcacactttttacgttggaactttcttttcaaaaatacccttaatttt 12216855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 38001450 - 38001497
Alignment:
Q  134 tagtcaattataaaataacacgtggattaataatcaatgtcactaatc 181  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  38001450 tagtcaattataaaataacacatggattactaatccatgtcactaatc 38001497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 44673517 - 44673450
Alignment:
Q  58 ataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttta 125  Q
    |||||||| ||| | |||||| ||| || | ||||| |||||||||||||||||||||||||||||||    
T  44673517 ataaaaaaatactcctttcaacacacttctgggttggaattttctttccaaaaatacccttaatttta 44673450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 54198366 - 54198323
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatc 181  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||    
T  54198366 caattataaaataacacgtggattactaatccatgtcactaatc 54198323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 12214885 - 12214795
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||| ||||||  ||||||||| |||||| ||  |||| || |||| ||||||||||||||||||||| |||||| | ||||||||    
T  12214885 atctatactatgtataaagaaaactacccctttcaacac--ttttgggctgaatttttctttccaaaaataccctcaattttcagtacaaata 12214795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 12216655 - 12216740
Alignment:
Q  44 aatctatactatatataaaaa--actacccatttcaataca-tttttaggttgaaattttctttccaaaaatacccttaattttaa 126  Q
    |||||||||||| ||||||||  |||| || |||||  ||| ||||||||||| |||||||||| ||||||||||| |||||||||    
T  12216655 aatctatactatgtataaaaataactatccctttcagcacactttttaggttggaattttcttttcaaaaatacccataattttaa 12216740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 6385206 - 6385247
Alignment:
Q  92 tgaaattttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||| |||||||||||||||||||||||||||| ||||||||    
T  6385206 tgaatttttctttccaaaaatacccttaattttcaatacaaa 6385247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 54198508 - 54198471
Alignment:
Q  91 ttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  54198508 ttgaacttttctttccaaaaatacccttaattttaaat 54198471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 11064769 - 11064721
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaa 132  Q
    |||| ||||| | |||||||||||||||||||||||||||| |||||||    
T  11064769 ttttgggttggacttttctttccaaaaatacccttaattttcaatacaa 11064721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 22160650 - 22160686
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  22160650 ttttctttccaaaaatacccttaatttttaatacaaa 22160686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 23316199 - 23316235
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  23316199 ttttctttccaaaaatacccttaatttttaatacaaa 23316235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 50996346 - 50996382
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  50996346 ttttctttccaaaaatacccttaatttttaatacaaa 50996382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 43317405 - 43317456
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||| ||||||| |||||||| |||||||||||| |||||| ||||||||||    
T  43317405 ttttgggttgaatttttcttttcaaaaataccctcaattttcaatacaaata 43317456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 9162871 - 9162809
Alignment:
Q  62 aaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||||||| ||| |  ||| ||||| |||||| ||||||||||||||||||| ||||||||    
T  9162871 aaaactaccccttttagcacacttttaagttgaacttttctttccaaaaatacctttaatttt 9162809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 23432094 - 23432023
Alignment:
Q  62 aaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||||||||  ||| |||| || |||| ||||||||| |||||| |||| |||||| ||||||||||    
T  23432094 aaaactacccatttca--acacttttgggctgaatttttctttcaaaaaatgccctcaattttcaatacaaata 23432023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 26005810 - 26005899
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||| |||||||||||  ||| ||||| ||||||  ||||||| ||||| | ||||||||| ||||||||||| |||||| ||||||||||    
T  26005810 atctatgctatatataaagaaaattacccctttcaa--cattttttggttgga-ttttctttctaaaaataccctcaattttcaatacaaata 26005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 34857805 - 34857843
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  34857805 ttttcttttcaaaaatacccttaattttcaatacaaata 34857843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 44814515 - 44814557
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaat 180  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||    
T  44814515 caattataaaataacacgtagattactaatctatgtcactaat 44814557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 54162524 - 54162562
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  54162524 ttttcttttcaaaaatacccttaattttcaatacaaata 54162562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 4959178 - 4959133
Alignment:
Q  90 gttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||| |||||||||||||||||||||  ||||| ||||||||||    
T  4959178 gttgaatttttctttccaaaaataccctctattttcaatacaaata 4959133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 12216960 - 12217021
Alignment:
Q  133 atagtcaattataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    |||| |||||||||||||||| |||||||| ||||| |||||| |||| ||  |||||||||    
T  12216960 atagccaattataaaataacatgtggattactaatccatgtcagtaattgttcttgttaacc 12217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 29096829 - 29096882
Alignment:
Q  82 atttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||| ||||||| ||||| ||| ||||||||||| |||||| ||||||||||    
T  29096829 atttttgggttgaatttttccttctaaaaataccctcaattttcaatacaaata 29096882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 44469206 - 44469165
Alignment:
Q  92 tgaaattttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||| ||||||||||||||||||||| |||||| ||||||||    
T  44469206 tgaatttttctttccaaaaataccctcaattttcaatacaaa 44469165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 5661903 - 5661935
Alignment:
Q  103 ttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||||||||||| ||||||||||    
T  5661903 ttccaaaaatacccttaatttttaatacaaata 5661935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 25921275 - 25921311
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  25921275 ttttctttccaaaaatacccttaacttttaatacaaa 25921311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 184
Target Start/End: Complemental strand, 2439017 - 2438876
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatagtcaatt 142  Q
    ||||||||||||||||||  |||||| |  |||||  | | |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2439017 atctatactatatataaagaaaactatcattttcagcatacttttgggttgaacttttctttccaaaaatacccttaattttaaatacaaatagtcaatt 2438918  T
Q  143 ataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    |||||||||||||||||||| ||||  |||||||||||||||    
T  2438917 ataaaataacacgtggattagtaattcatgtcactaatcgtc 2438876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 194
Target Start/End: Original strand, 3676296 - 3676437
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatagtcaattataaaataac 152  Q
    |||||||| ||||| |||  ||||| |||| |||| ||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3676296 tatatatagaaaacaacctttttcagtacacttttgggttggacttttcttcccaaaaatacccttaattttaaatacaaatagtcaattatacaataac 3676395  T
Q  153 acgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    |||||||||| ||||| || ||||||||||||  ||||||||    
T  3676396 acgtggattagtaatccatatcactaatcgtccctgttaacc 3676437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 167
Target Start/End: Complemental strand, 17590124 - 17590000
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatagtcaatt 142  Q
    ||||||||||||||||||  ||||||||  |||||  |||||||| ||||  | ||||||||||||||||||| |||||||||| ||||||||    |||    
T  17590124 atctatactatatataaagaaaactacctctttcagcacatttttgggttcgatttttctttccaaaaataccattaattttaattacaaataactcatt 17590025  T
Q  143 ataaaataacacgtggattaataat 167  Q
    | |||||||||||||||||| ||||    
T  17590024 acaaaataacacgtggattagtaat 17590000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 35219540 - 35219454
Alignment:
Q  48 tatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaa 132  Q
    |||| ||||||||||  ||||||||  |||||| ||| |||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  35219540 tatattatatataaaggaaactaccgctttcaacacacttttgggttggacttttctttccaaaaatacccttaattttaaatacaa 35219454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 10927706 - 10927788
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||| | |||| ||||| |||||  ||| ||||  ||||||||||||||||||||||||| |||||||||||||| |||||    
T  10927706 tatataaagaaaattacccctttcagcacacttttgagttgaaattttctttccaaaaatactcttaattttaaatataaata 10927788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 23915573 - 23915527
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  23915573 caattataaaataacacgtggattactaatctatgtcactaatcgtc 23915527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 16316738 - 16316693
Alignment:
Q  139 aattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  16316738 aattataaaataacacgtggattactaatccatgtcactaatcgtc 16316693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 10927873 - 10927929
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||| | |||||||    
T  10927873 caattataaaataacacgtggattactaatccatgtcaataatcgtcctcgttaacc 10927929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 32250009 - 32249953
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||||  ||||||||    
T  32250009 caattataaaataacacgtagattactaatccatgtcactaatcgtctctgttaacc 32249953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 11323119 - 11323174
Alignment:
Q  80 acatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||| ||||| | ||||||||||||||||||||| |||||| ||||||||||    
T  11323119 acatttttgggttggatttttctttccaaaaataccctcaattttcaatacaaata 11323174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 2537063 - 2537109
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  2537063 caattataaaataacacgtgggttactaatccatgtcactaatcgtc 2537109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 13846835 - 13846871
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  13846835 ttttctttccaaaaatacccttaatttttaatacaaa 13846871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 17589990 - 17589947
Alignment:
Q  125 aaatacaaatagtcaattataaaataacacgtggattaataatc 168  Q
    |||||||||||| |||||||||| |||||||||||||| |||||    
T  17589990 aaatacaaatagccaattataaattaacacgtggattagtaatc 17589947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 32250201 - 32250119
Alignment:
Q  44 aatctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||||| ||||||||||  |||||| |  |||||  ||| |||||||||| | |||||||| |||||||||||||||||||    
T  32250201 aatctatattatatataaaggaaactatctctttcagcacacttttaggttggatttttcttttcaaaaatacccttaatttt 32250119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 16186836 - 16186890
Alignment:
Q  81 catttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||| ||||| | ||||||||||||||| ||||| |||||| ||||||||||    
T  16186836 catttttcggttggatttttctttccaaaaacaccctcaattttcaatacaaata 16186890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 14894645 - 14894694
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||| ||||| | |||||||| ||||||||||||||||||| ||||||||    
T  14894645 ttttgggttggatttttcttttcaaaaatacccttaattttcaatacaaa 14894694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 23124232 - 23124268
Alignment:
Q  100 tctttccaaaaatacccttaattttaaatacaaatag 136  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  23124232 tctttccaaaattacccttaattttcaatacaaatag 23124268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 27902228 - 27902139
Alignment:
Q  44 aatctatactatatataaaaaa--ctacccatttcaata---catttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    ||||||||||||||||||| ||  |||||| |||||| |   || |||| ||||| | ||||| |||||||||||| |||||||||||||    
T  27902228 aatctatactatatataaagaaatctacccctttcaaaaaaacacttttgggttggacttttccttccaaaaatacacttaattttaaat 27902139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 6e-37; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 22176411 - 22176533
Alignment:
Q  62 aaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatagtcaattataaaataacacgtggatt 161  Q
    |||||||||| |||||  | | |||| ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22176411 aaaactacccctttcagcagacttttgggttgaacttttcttttcaaaaatacccttaattttaaatacaaatagccaattataaaataacacgtggatt 22176510  T
Q  162 aataatcaatgtcactaatcgtc 184  Q
    | ||||| |||||||||||||||    
T  22176511 agtaatccatgtcactaatcgtc 22176533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 22101488 - 22101589
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatagtcaattataaaataacacgtggattaataatcaatgtcactaatcgt 183  Q
    |||| ||||||| |||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  22101488 ttttgggttgaacttttcttttcaaaaatacctttaattttaaatacaaatagccaattataaaataacacgtggattagtaatccatgtcactaatcgt 22101587  T
Q  184 ca 185  Q
    ||    
T  22101588 ca 22101589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 134
Target Start/End: Complemental strand, 42897121 - 42897030
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaat 134  Q
    ||||||||||||||||||  ||||||||| |||||  ||| ||||  |||| | ||||||||||||||||||||||||||||||||||||||    
T  42897121 atctatactatatataaagaaaactacccctttcagcacacttttgtgttggatttttctttccaaaaatacccttaattttaaatacaaat 42897030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 18722473 - 18722383
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||| |||||||||  ||||||||| |||||   ||||||||||||||  ||||||||||||||||||||| |||||| ||||||||||    
T  18722473 atctatacaatatataaagaaaactacccctttcag--catttttaggttgattttttctttccaaaaataccctcaattttcaatacaaata 18722383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 22833295 - 22833344
Alignment:
Q  134 tagtcaattataaaataacacgtggattaataatcaatgtcactaatcgt 183  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  22833295 tagtcaattataaaataacacgtggattactaatccatgtcactaatcgt 22833344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 3422896 - 3422811
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    ||||||||||||||||||  |||||  || |||||  ||| |||| ||||| | ||||||||||||||||||||||||||||||||    
T  3422896 atctatactatatataaagaaaactgtccctttcagcacacttttgggttggacttttctttccaaaaatacccttaattttaaat 3422811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 35863750 - 35863704
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  35863750 caattataaaataacacgtggattactaatccatgtcactaatcgtc 35863704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 51834208 - 51834116
Alignment:
Q  45 atctatactata-tataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatag 136  Q
    |||||||||||| ||||||  ||||||||| |||||| ||  ||||  |||||| ||||||||||||||||||||| |||||| |||||||||||    
T  51834208 atctatactataatataaagaaaactacccctttcaacac--ttttgagttgaatttttctttccaaaaataccctcaattttcaatacaaatag 51834116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 3424768 - 3424693
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    |||||| | |||||||||| ||||| || | |||| ||||| | |||| |||||||||||||||||||||||||||    
T  3424768 tatataaagaaaactacccctttcagtatacttttgggttggacttttatttccaaaaatacccttaattttaaat 3424693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 28096096 - 28096178
Alignment:
Q  44 aatctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||||||||||||||||  |||||| || |||||  ||| |||| ||||||| ||||| ||||||||||||| ||||||||    
T  28096096 aatctatactatatataaagaaaactatccctttcagcacacttttgggttgaacttttccttccaaaaatacctttaatttt 28096178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 51139837 - 51139766
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||| | |||||||||| |||||  ||| |||| ||||||| |||||||| |||||||||||||||||||    
T  51139837 tatataaagaaaactacccctttcagcacacttttgggttgaacttttcttttcaaaaatacccttaatttt 51139766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 7116232 - 7116151
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||||||||||||||  ||||||||| |||||  ||| |||| ||||  | |||||||||||||||||| |||||||||    
T  7116232 atctatactatatataaagaaaactacccctttcagcacacttttgggtttgacttttctttccaaaaatacacttaatttt 7116151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 23251425 - 23251379
Alignment:
Q  89 ggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  23251425 ggttgaatttttctttccaaaaatgcccttaattttcaatacaaata 23251379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 35369082 - 35369128
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  35369082 caattataaaataacacatggattactaatccatgtcactaatcgtc 35369128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 27004041 - 27003988
Alignment:
Q  82 atttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||| ||||| | ||||||||||||||||||  |||||||||||||||||||    
T  27004041 attttttggttggatttttctttccaaaaatactattaattttaaatacaaata 27003988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 44821913 - 44821993
Alignment:
Q  46 tctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||||||||||||||  ||| ||  |||||||  ||| |||| ||||| | ||||||||||||||||||||||||||||    
T  44821913 tctatactatatataaagaaaattattcatttcagcacacttttgggttggatttttctttccaaaaatacccttaatttt 44821993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 3806959 - 3806995
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  3806959 ttttctttccaaaaatacccttaatttttaatacaaa 3806995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 22101797 - 22101849
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaatttt-aaatacaaata 135  Q
    |||| ||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  22101797 ttttgggttgaacttttcttttcaaaaatacccttaattttaaaatacaaata 22101849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 22101935 - 22101979
Alignment:
Q  140 attataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  22101935 attataaaataacacatggattactaatccatgtcactaatcgtc 22101979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 22176882 - 22176926
Alignment:
Q  140 attataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  22176882 attataaaataacacatggattactaatccatgtcactaatcgtc 22176926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 28096294 - 28096350
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    |||||||||||||||| || ||||| ||||| ||||||||||||||| | |||||||    
T  28096294 caattataaaataacatgttgattactaatccatgtcactaatcgtcctcgttaacc 28096350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 33706406 - 33706370
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  33706406 ttttctttccaaaaatacccttaatttttaatacaaa 33706370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 37980587 - 37980623
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  37980587 ttttctttccaaaaatacccttaatttttaatacaaa 37980623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 44176784 - 44176748
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  44176784 ttttctttccaaaaatacccttaatttttaatacaaa 44176748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 44183466 - 44183430
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  44183466 ttttctttccaaaaatacccttaatttttaatacaaa 44183430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 53359345 - 53359385
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||| ||||| ||||||||||||||||||||||||||||||    
T  53359345 ttttgggttggaattttctttccaaaaatacccttaatttt 53359385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 13875272 - 13875323
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||| ||||||| ||||||||||||||||| ||| |||||| ||||||||||    
T  13875272 ttttgggttgaatttttctttccaaaaatatcctcaattttcaatacaaata 13875323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 35378870 - 35378921
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||| | ||||||||| ||||||||||| |||||| ||||||||||    
T  35378870 ttttaggttgtatttttctttcaaaaaataccctcaattttcaatacaaata 35378921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 35938669 - 35938704
Alignment:
Q  100 tctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||||| ||||||||||||||||||||||    
T  35938669 tctttccaaaaatgcccttaattttaaatacaaata 35938704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 51834052 - 51834009
Alignment:
Q  92 tgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||    
T  51834052 tgaatttttctttccaaaaataccctcaattttcaatacaaata 51834009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 7116361 - 7116280
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||||||||||||||  ||| ||| | |||||  ||| ||||  |||| | ||||||||||||||||||||||||||||    
T  7116361 atctatactatatataaagaaaaatactcctttcagcacacttttgcgttggacttttctttccaaaaatacccttaatttt 7116280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 7116639 - 7116593
Alignment:
Q  134 tagtcaattataaaataacacgtggattaataatcaatgtcactaat 180  Q
    |||||||||||||||||||||||| |||||| ||  |||||||||||    
T  7116639 tagtcaattataaaataacacgtgaattaatgattcatgtcactaat 7116593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 18195354 - 18195392
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  18195354 ttttctttccaaaaatactcttaatttttaatacaaata 18195392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 21078410 - 21078497
Alignment:
Q  45 atctatactatatataaaaaactacccatttcaatacatttttaggttgaaatttt-ctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||| | |||||||||| |||||| ||  |||| ||||| | |||| |||| |||||||||||| |||||| ||||||||    
T  21078410 atctatactatataaagaaaactacccctttcaacac--ttttgggttggattttttcttttcaaaaataccctcaattttcaatacaaa 21078497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 22100633 - 22100671
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  22100633 ttttctttccacaaatacctttaattttaaatacaaata 22100671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 22175572 - 22175610
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  22175572 ttttcttttcaaaaatacctttaattttaaatacaaata 22175610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 44822061 - 44822115
Alignment:
Q  70 ccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||||  ||| |||| |||||||  |||||||||||||||||||||||||||    
T  44822061 ccatttcagcacacttttgggttgaacatttctttccaaaaatacccttaatttt 44822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 34492078 - 34492119
Alignment:
Q  139 aattataaaataacacgtggattaataatcaatgtcactaat 180  Q
    ||||||||||||||||||| |||| ||||| |||||||||||    
T  34492078 aattataaaataacacgtgaattactaatccatgtcactaat 34492119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 35368911 - 35368976
Alignment:
Q  63 aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    |||||| || |||||  ||| |||| ||||| | |||||||||||||||||||||| |||||||||    
T  35368911 aaactatccctttcagcacacttttgggttggacttttctttccaaaaatacccttgattttaaat 35368976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 2368834 - 2368782
Alignment:
Q  83 tttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||| ||||| | |||||||| |||||||||||| |||||| ||||||||||    
T  2368834 ttttttggttggatttttcttttcaaaaataccctcaattttcaatacaaata 2368782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 7116804 - 7116740
Alignment:
Q  60 aaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||| ||||| |||||  ||| |||| ||||| | ||||||||||||||||| ||||||||||    
T  7116804 aaaaaattacccttttcagcacacttttgggttggacttttctttccaaaaatatccttaatttt 7116740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 28391097 - 28391141
Alignment:
Q  91 ttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||| ||||||||| ||||||||||| |||||| ||||||||||    
T  28391097 ttgaatttttctttctaaaaataccctcaatttttaatacaaata 28391141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 35863958 - 35863918
Alignment:
Q  95 aattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||| ||| ||||||| ||||||||||||||||||||||    
T  35863958 aattttattttcaaaaatgcccttaattttaaatacaaata 35863918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 28221923 - 28222056
Alignment:
Q  48 tatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatagtcaattata 145  Q
    |||||||||||||||  |||||| |  |||||  ||| |||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28221923 tatactatatataaagaaaactatctctttcagcacacttttgggttggacttttctttccaaaaatacccttaattttaaatacaaatagtcaattata 28222022  T
Q  146 aaataacacgtggattaataatcaatgtcactaa 179  Q
    |||||||| |||||||| ||||| ||||||||||    
T  28222023 aaataacatgtggattagtaatccatgtcactaa 28222056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 38938858 - 38938768
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaa 133  Q
    ||||||||||||||||||  ||||||||| |||||  ||| |||| ||||| | |||||||||||||||||||||||||||||||||||||    
T  38938858 atctatactatatataaagaaaactacccctttcagcacacttttgggttggacttttctttccaaaaatacccttaattttaaatacaaa 38938768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 38939120 - 38939034
Alignment:
Q  44 aatctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    |||||||||||||||||||  ||||||||| |||||| ||| |||| | ||| | ||||||||||||||||||||||||||||||||    
T  38939120 aatctatactatatataaagaaaactacccctttcaacacacttttggattggacttttctttccaaaaatacccttaattttaaat 38939034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 3160973 - 3160884
Alignment:
Q  91 ttgaaattttctttccaaaaatacccttaattttaaatacaaatagtcaattataaaataacacgtggattaataatcaatgtcactaatc 181  Q
    ||||| |||||||||||||| ||||||||||||| ||||||| || ||||||||||||||||| ||| |||| ||||| || |||||||||    
T  3160973 ttgaacttttctttccaaaa-tacccttaattttgaatacaattaatcaattataaaataacatgtgaattagtaatccatatcactaatc 3160884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 7464418 - 7464327
Alignment:
Q  45 atctatactatatataaaa---aactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||||||||   ||||| || ||||||  ||||||| ||||||| ||||||||||||||||||| | |||||| ||||||||||    
T  7464418 atctatactatatataaaagaaaactatccctttcaa--catttttgggttgaacttttctttccaaaaataccttcaattttcaatacaaata 7464327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 1190213 - 1190295
Alignment:
Q  48 tatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    |||||||| ||||||  ||||||||| ||| |  ||| |||| ||||| ||||||||||||||||||||||||||||||||||    
T  1190213 tatactatgtataaagaaaactaccccttttagcacacttttgggttggaattttctttccaaaaatacccttaattttaaat 1190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 28766089 - 28766140
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  28766089 ttttgggttgaatttttctttccaaaaatacccttaatttttaatacaaata 28766140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 24007256 - 24007346
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||| ||||||||||  ||||||||| |||||   ||||||| ||||||| |||||||| |||||||||||| |||||| ||||||||||    
T  24007256 atctatattatatataaagaaaactacccctttcag--catttttgggttgaatttttcttttcaaaaataccctcaattttgaatacaaata 24007346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 24836523 - 24836606
Alignment:
Q  51 actatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaat 134  Q
    ||||||||||||  |||||| | ||||||| ||  |||||||||| | ||||||||||||||||||||| |||||| |||||||||    
T  24836523 actatatataaagaaaactatcaatttcaacac--ttttaggttggatttttctttccaaaaataccctaaattttcaatacaaat 24836606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 28604266 - 28604317
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||| || | ||||||||||||||||||||||||| |||||||||||    
T  28604266 ttttaggtttaactattctttccaaaaatacccttaatttaaaatacaaata 28604317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 38697253 - 38697210
Alignment:
Q  92 tgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  38697253 tgaaattttctttccaaaaatgcccttaatttttaatacaaata 38697210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 28263892 - 28263846
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||||||||||| ||||  |||||||||||||||    
T  28263892 caattataaaataacacgtggattactaattcatgtcactaatcgtc 28263846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 35271880 - 35271970
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||||||||||  ||||||||  |||||  ||  |||| || |||| ||||||||||||||||||| |||||||| ||||||||||    
T  35271880 atctatactatatataaagaaaactacctttttcagcac--ttttgggctgaatttttctttccaaaaataccattaattttcaatacaaata 35271970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 28394430 - 28394394
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  28394430 ttttctttccaaaaatacccttaatttttaatacaaa 28394394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 31172062 - 31172026
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  31172062 ttttctttccaaaaatacccttaatttttaatacaaa 31172026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 41875203 - 41875167
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  41875203 ttttctttccaaaaatacccttaatttttaatacaaa 41875167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 33628936 - 33628979
Alignment:
Q  92 tgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||||||||||||||| |||||| |||| |||||    
T  33628936 tgaaattttctttccaaaaataccctcaattttcaataaaaata 33628979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 43369888 - 43369979
Alignment:
Q  44 aatctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||||||||  |||||||   |||||| ||  |||| || |||| ||||||||| ||||||||||| |||||| ||||||||||    
T  43369888 aatctatactatatataaagaaaactacttctttcaacac--ttttgggatgaatttttctttctaaaaataccctcaattttcaatacaaata 43369979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 19126415 - 19126453
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  19126415 ttttccttccaaaaataccctcaattttaaatacaaata 19126453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 3161041 - 3160972
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatt 122  Q
    |||||| | |||||||||| || ||  ||| |||| ||||||| ||||| ||||||||||||||||||||    
T  3161041 tatataaagaaaactaccccttccagcacacttttgggttgaacttttcattccaaaaatacccttaatt 3160972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 38938986 - 38938917
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatt 122  Q
    |||||| | |||||||||| |||||  ||| |||| ||||| | |||||||| |||||||||||||||||    
T  38938986 tatataaagaaaactacccctttcagcacacttttgggttggacttttcttttcaaaaatacccttaatt 38938917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 13577594 - 13577646
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatag 136  Q
    |||| ||||||| ||||||||||||| ||||||| | |||| |||||||||||    
T  13577594 ttttgggttgaatttttctttccaaagataccctgagttttcaatacaaatag 13577646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 19514394 - 19514314
Alignment:
Q  44 aatctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||| |||||||||||  ||||||| | |||||   ||||||| ||||||| |||||||| |||||||||||| ||||||    
T  19514394 aatctattctatatataaagaaaactactcctttcag--catttttgggttgaatttttcttttcaaaaataccctcaatttt 19514314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 27263602 - 27263566
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  27263602 ttttctttccaaaaatgcccttaatttttaatacaaa 27263566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 9329605 - 9329739
Alignment:
Q  48 tatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatagtcaattata 145  Q
    |||||||||||||||  ||||||||| |||||| ||| |||| ||||| | ||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  9329605 tatactatatataaagaaaactacccttttcaacacacttttgggttggatttttctttc-aaaaatacccttaattttaaatataaatagacaattata 9329703  T
Q  146 aaataacacgtggattaataatcaatgtcactaatc 181  Q
    |||||||| |||||||| ||||| |||||| |||||    
T  9329704 aaataacatgtggattagtaatccatgtcattaatc 9329739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 11321536 - 11321451
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    ||||||||||||||||||  ||||||||| |||||  ||| |||| ||||| | |||||||||||||| |||||||||||||||||    
T  11321536 atctatactatatataaagaaaactacccctttcagcacacttttgggttggacttttctttccaaaactacccttaattttaaat 11321451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 9302210 - 9302263
Alignment:
Q  141 ttataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  9302210 ttataaaataactcgtggattaataatccatgtaactaatcgtcattgttaacc 9302263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 9306648 - 9306701
Alignment:
Q  141 ttataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  9306648 ttataaaataactcgtggattaataatccatgtaactaatcgtcattgttaacc 9306701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 39675495 - 39675543
Alignment:
Q  80 acatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  39675495 acatttttaggttgaatttttcttttcaaaaatacccttaattttaaat 39675543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 9302015 - 9302099
Alignment:
Q  46 tctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    |||||| ||||||||||  ||||||||| |||||  ||| |||| ||||| | |||||||| |||||||||||||||||||||||    
T  9302015 tctatattatatataaagaaaactacccctttcagcacacttttgggttggacttttcttttcaaaaatacccttaattttaaat 9302099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 9306453 - 9306537
Alignment:
Q  46 tctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    |||||| ||||||||||  ||||||||| |||||  ||| |||| ||||| | |||||||| |||||||||||||||||||||||    
T  9306453 tctatattatatataaagaaaactacccctttcagcacacttttgggttggacttttcttttcaaaaatacccttaattttaaat 9306537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 21094328 - 21094239
Alignment:
Q  48 tatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatagt 137  Q
    |||||||||||||||  |||||||||| ||||  ||  |||| ||||| | ||||||||||||||||||||| |||||| ||||||||||||    
T  21094328 tatactatatataaagaaaactacccaattcagcac--ttttgggttggatttttctttccaaaaataccctcaattttcaatacaaatagt 21094239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 47911929 - 47911969
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  47911929 ttttaggttgtaattttctttccaaaaatacccttaatttt 47911969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 27723172 - 27723121
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||| ||||| |||||||||||||||||| ||||||||| ||||||||||    
T  27723172 ttttagattgaatttttctttccaaaaatactcttaattttcaatacaaata 27723121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 41755680 - 41755609
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||||| |||||||||| ||||  |||| ||||  |||| | ||||||||||||||||||||||||||||    
T  41755680 tatatatataaaactacccctttcggtacacttttgagttggacttttctttccaaaaatacccttaatttt 41755609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 5096284 - 5096248
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  5096284 ttttctttccaaaaatacccttaatttttaatacaaa 5096248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 20479926 - 20479994
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaat 121  Q
    |||||| | |||||||| |||||||| ||| |||| ||||| | ||| |||||||||||||||||||||    
T  20479926 tatataaagaaaactacacatttcaacacagttttcggttggactttactttccaaaaatacccttaat 20479994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 39753363 - 39753327
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  39753363 ttttctttccaaaaatacccttaatttttaatacaaa 39753327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 20045156 - 20045207
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||| ||||||| |||||||||||||||| |||| |||||| ||||||||||    
T  20045156 ttttgggttgaatttttctttccaaaaattccctcaattttcaatacaaata 20045207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 27725053 - 27725002
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||| ||||| | ||||||||||||||||||||| |||||| ||||||||||    
T  27725053 ttttgggttggatttttctttccaaaaataccctcaatttttaatacaaata 27725002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 44485484 - 44485535
Alignment:
Q  82 atttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||| || |||| |||||||| ||||||||||||||||||| ||||||||    
T  44485484 atttttgggctgaatttttcttttcaaaaatacccttaattttcaatacaaa 44485535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 45022717 - 45022631
Alignment:
Q  44 aatctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    |||||||||||||||||||  |||||| || |||||  ||| |||  | ||||| ||||||||| ||||||||| ||||||||||||    
T  45022717 aatctatactatatataaagaaaactatccctttcagcacactttaggattgaacttttctttcaaaaaatacctttaattttaaat 45022631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 47220819 - 47220890
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||| | |||||||||  |||||  ||| |||| |||| || ||||||||||||||||||||||||||||    
T  47220819 tatataaagaaaactacctctttcatgacacttttgggttaaacttttctttccaaaaatacccttaatttt 47220890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 20621324 - 20621278
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    |||||||||||||||| || ||||| ||||| |||||||||||||||    
T  20621324 caattataaaataacaagtagattactaatccatgtcactaatcgtc 20621278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 21093881 - 21093843
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  21093881 ttttatttccaaaaataccctcaattttaaatacaaata 21093843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 6475049 - 6475004
Alignment:
Q  89 ggttgaaattttctttccaaaaatacccttaattttaaatacaaat 134  Q
    ||||||| ||||||||| ||||||||| | ||||||||||||||||    
T  6475049 ggttgaatttttctttctaaaaataccttcaattttaaatacaaat 6475004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 2275215 - 2275251
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  2275215 ttttctttccaaaaataccctcaattttcaatacaaa 2275251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 8949275 - 8949223
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatag 136  Q
    |||| ||||||| ||||||||||||| ||||||| | |||| |||||||||||    
T  8949275 ttttgggttgaatttttctttccaaagataccctgagttttcaatacaaatag 8949223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 35492182 - 35492238
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    |||||||||||||||| |||||||| ||||  |||||||||||| || | |||||||    
T  35492182 caattataaaataacatgtggattactaattcatgtcactaatcatcctcgttaacc 35492238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 44973184 - 44973084
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaatagtcaattataaaataac 152  Q
    |||||| | |||||||||| |||||  ||| |||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44973184 tatataaagaaaactacccctttcagcacacttttaggttggacttttctttctaaaaatacccttaattttaaatacaaatagtcaattataaaataac 44973085  T
Q  153 a 153  Q
    |    
T  44973084 a 44973084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 25048234 - 25048153
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||||||||||||||  ||||||||| |||||| ||  |||||||||| | |||||||||| |||||||||||||||||    
T  25048234 atctatactatatataaagaaaactacccctttcaacacgcttttaggttggacttttctttccgaaaatacccttaatttt 25048153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 7061709 - 7061781
Alignment:
Q  62 aaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||| |||||| ||| |||| ||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  7061709 aaaactaccc-tttcaacacacttttgggttgaacttttcttttcaaaaatacccttgattttaaatacaaata 7061781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 44539773 - 44539702
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||| | ||||||| ||||||||  ||| |||| ||||||| ||||||||||||||||||||||||||||    
T  44539773 tatataaagaaaactatccatttcagcacacttttgggttgaacttttctttccaaaaatacccttaatttt 44539702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 35193511 - 35193461
Alignment:
Q  134 tagtcaattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||||||    
T  35193511 tagtcaattataaaataacatgtggattactaatccatgtcactaatcgtc 35193461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 35193702 - 35193622
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||||||||||||||  ||||||||| |||||  ||| |||| ||||| ||||||||||||||||||| ||||||||||    
T  35193702 atctatactatatataaagaaaactaccc-tttcagcacaattttgggttggaattttctttccaaaaatatccttaatttt 35193622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 2221910 - 2221974
Alignment:
Q  60 aaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||||||||| |||||  ||| |||| ||||||| ||||||||||||||||||||||| ||||    
T  2221910 aaaaaactacccctttcagcacacttttgggttgaacttttctttccaaaaatacccttattttt 2221974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 8063316 - 8063236
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||| ||||||||| ||||||   ||||||| | ||||| ||||||||| ||||||||||| |||||| ||||||||||    
T  8063316 tatatatagaaaactaccaatttcag--catttttggattgaatttttctttcaaaaaataccctcaattttcaatacaaata 8063236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 19901660 - 19901609
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||| ||||| | ||||||||||||||||||||||||||||||||| |||||    
T  19901660 ttttgggttggacttttctttccaaaaatacccttaattttaaataaaaata 19901609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 21956528 - 21956579
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||| ||||| | |||||||| ||||||||||||||||||||||||||||||    
T  21956528 ttttgggttggacttttcttttcaaaaatacccttaattttaaatacaaata 21956579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 309852 - 309898
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||    
T  309852 caattataaaataacatgtggattactaatccatgtcactaatcgtc 309898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 3357982 - 3357944
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  3357982 ttttctttccaaaaatacccttaattttcaatacaaata 3357944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 13596338 - 13596284
Alignment:
Q  81 catttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||| ||||| | |||||||| |||||||| |||||||||||||||||||||    
T  13596338 catttttgggttgcatttttcttttcaaaaatagccttaattttaaatacaaata 13596284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 40633712 - 40633658
Alignment:
Q  81 catttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||| ||||| | |||||||||||||||||||||||||||| | ||||||||    
T  40633712 catttttgggttggatttttctttccaaaaatacccttaattttcactacaaata 40633658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 36214051 - 36214100
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||  ||| |||||||||||||||||||||||||||| ||||||||    
T  36214051 ttttaggcagaatttttctttccaaaaatacccttaatttttaatacaaa 36214100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 7061863 - 7061923
Alignment:
Q  134 tagtcaattataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    ||||||||||||||||||||| ||||||| ||||  || |||||||||||| | |||||||    
T  7061863 tagtcaattataaaataacacatggattactaattcatatcactaatcgtcctcgttaacc 7061923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 40324146 - 40324110
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  40324146 ttttctttccaaaaatacccttaatttttaatacaaa 40324110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 43528443 - 43528490
Alignment:
Q  137 tcaattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||| ||| |||| ||||| |||||||||||||||    
T  43528443 tcaattataaaataacatgtgaattactaatccatgtcactaatcgtc 43528490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 25048009 - 25047963
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||| ||||||| ||||  |||||||||||||||    
T  25048009 caattataaaataacacatggattactaatgtatgtcactaatcgtc 25047963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 124
Target Start/End: Original strand, 43528298 - 43528340
Alignment:
Q  82 atttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||| ||||| | ||||||||||||||||||||||||||||    
T  43528298 atttttgggttggacttttctttccaaaaatacccttaatttt 43528340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 629399 - 629452
Alignment:
Q  81 catttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaat 134  Q
    ||||||| ||||||| |||||||| |||||||||||| |||||| ||| |||||    
T  629399 catttttgggttgaatttttcttttcaaaaataccctcaattttcaatgcaaat 629452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 13594520 - 13594565
Alignment:
Q  139 aattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||| |||||||| ||||| |||| ||||||||||    
T  13594520 aattataaaataacatgtggattactaatccatgtaactaatcgtc 13594565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 2383383 - 2383419
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  2383383 ttttctttccaaaaatacccttattttttaatacaaa 2383419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 44539598 - 44539542
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    ||||||||||||||||||||||||| ||||  |||||| |||| ||||  |||||||    
T  44539598 caattataaaataacacgtggattactaattcatgtcattaattgtcacagttaacc 44539542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 32889013 - 32889105
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||| |||||  |||||| || |||||  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32889013 atctatactatagataaagaaaactatccctttcagcacacttttaggttgaacttttctttccaaaaatacccttaattttaaatacaaata 32889105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 26528051 - 26528112
Alignment:
Q  62 aaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||||||| |||||| |||||||| ||||||| ||||||||||||||||||||||||||||    
T  26528051 aaaactaccc-tttcaacacatttttgggttgaacttttctttccaaaaatacccttaatttt 26528112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 5592769 - 5592720
Alignment:
Q  134 tagtcaattataaaataacacgtggattaataatcaatgtcactaatcgt 183  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  5592769 tagtcaattataaaataacacgtggattactaatccatgtcactaatcgt 5592720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 21307437 - 21307357
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||| |||||||||||| |||||   ||||||||||||| | |||||||||||||||| |||| |||||| ||||||||||    
T  21307437 tatataaaaaaaactacccctttcag--catttttaggttggatttttctttccaaaaatgccctcaattttcaatacaaata 21307357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 32889137 - 32889217
Alignment:
Q  50 tactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    |||||||||||||  |||||| || |||||  ||| |||| ||||||| |||||||| |||||||||||||||||||||||    
T  32889137 tactatatataaagaaaactatccctttcagcacacttttgggttgaacttttcttttcaaaaatacccttaattttaaat 32889217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 15898613 - 15898667
Alignment:
Q  81 catttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||| || |||| ||||||||||||||||||||| |||||| ||||||||||    
T  15898613 cattttttggctgaatttttctttccaaaaataccctcaatttttaatacaaata 15898667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 28773440 - 28773485
Alignment:
Q  90 gttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||| ||||||||||||||||||||| |||||| ||||||||||    
T  28773440 gttgaatttttctttccaaaaataccctcaattttcaatacaaata 28773485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 1658202 - 1658238
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  1658202 ttttctttccaaaaatacccttaatttttaatacaaa 1658238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 6336149 - 6336185
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  6336149 ttttctttccaaaaatacccttaatttttaatacaaa 6336185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 14031530 - 14031494
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  14031530 ttttctttccaaaaatacccttaatttttaatacaaa 14031494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 33480667 - 33480707
Alignment:
Q  95 aattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  33480667 aattttctttccaaaaatatccttaattttcaatacaaata 33480707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 37401986 - 37401950
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  37401986 ttttctttccaaaaatacccttaatttttaatacaaa 37401950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 1759839 - 1759784
Alignment:
Q  80 acatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||| || |||  ||||||||| |||||||||||||||||| ||||||||||    
T  1759839 acatttttgggctgattttttctttcgaaaaatacccttaattttcaatacaaata 1759784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 135
Target Start/End: Complemental strand, 19369081 - 19369046
Alignment:
Q  100 tctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||||||| |||||||||||||||||    
T  19369081 tctttccaaaaataccctcaattttaaatacaaata 19369046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 26528005 - 26527918
Alignment:
Q  46 tctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||| ||||||  ||||||||| |||||   ||||||| ||||| | |||||||||||||| |||||| |||||| ||||||||    
T  26528005 tctatactatgtataaagaaaactacccctttcag--catttttgggttggatttttctttccaaaattaccctcaattttcaatacaaa 26527918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 22438868 - 22438830
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  22438868 ttttctttccaaaaatactcttaatttttaatacaaata 22438830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 28969911 - 28969873
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  28969911 ttttctttccaaaaataccctaaattttcaatacaaata 28969873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 24023648 - 24023612
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||| |||||||||||| |||||||||||||||    
T  24023648 ttttcttttcaaaaataccctcaattttaaatacaaa 24023612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 24432049 - 24432125
Alignment:
Q  48 tatactatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||| |||||| | ||| ||| |||||| || |||||||| | ||||| ||||||||  ||||||||||||||||||    
T  24432049 tataatatataaagaaacctatccattttaacacatttttggattgaacttttctttttaaaaatacccttaatttt 24432125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 36802170 - 36802206
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  36802170 ttttctttccaaaaatacctttaatttttaatacaaa 36802206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 29699442 - 29699359
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaa 126  Q
    ||||||||||||||||||  ||||||||| |||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||    
T  29699442 atctatactatatataaagaaaactacccttttcaacacacttttgggttggaattttctttccaaaaatacccttaattttaa 29699359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 50231372 - 50231445
Alignment:
Q  62 aaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||| |||||  |||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  50231372 aaaactacccctttcagcacacctttgggttgaaattttcttttcaaaaatacccttaattttaaatacaaata 50231445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 14494794 - 14494844
Alignment:
Q  134 tagtcaattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  14494794 tagtcaattataaaataacacgtggattactaatccatgtcactaatcgtc 14494844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 8095977 - 8096048
Alignment:
Q  62 aaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||||||||   ||||||| ||||| | ||||||||||||||||||||| |||||| ||||||||||    
T  8095977 aaaactacccatttcag--catttttgggttggatttttctttccaaaaataccctaaattttcaatacaaata 8096048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 8528022 - 8528103
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||||||||||| ||  ||||||||| ||||   |||||||| ||||  ||||||||||||||||||||||||||||||    
T  8528022 atctatactatatatcaagaaaactacccctttcggcacatttttgggttagaattttctttccaaaaatacccttaatttt 8528103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 43575449 - 43575365
Alignment:
Q  46 tctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaat 128  Q
    |||||||||||||||||  ||| ||||| |||||| ||| |||| ||||||||||||||||| ||||| ||  ||||||||||||    
T  43575449 tctatactatatataaagaaaattacccctttcaacacacttttgggttgaaattttctttcaaaaaacacaattaattttaaat 43575365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 43577272 - 43577183
Alignment:
Q  46 tctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||||||  ||||||||| ||||  |||| |||| ||||| | ||||||||| ||||||||||| |||||| ||||||||||    
T  43577272 tctatactatatataaagaaaactacccctttc--tacacttttgggttggacttttctttcaaaaaataccctcaattttcaatacaaata 43577183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 24162723 - 24162672
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||| ||||| | |||||||||||| ||||||||||||||||||||||||||    
T  24162723 ttttgggttggacttttctttccaagaatacccttaattttaaatacaaata 24162672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 29699252 - 29699206
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  29699252 caattataaaataacacgtggattactaatccatgtcactgatcgtc 29699206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 11977982 - 11978027
Alignment:
Q  90 gttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||| |||||||||||||||| || |||||||||||||||||||    
T  11977982 gttgaatttttctttccaaaaatgcctttaattttaaatacaaata 11978027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 50231535 - 50231580
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgt 183  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||    
T  50231535 caattataaaataacacgtggattactaatccatgtcaataatcgt 50231580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 8028453 - 8028417
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  8028453 ttttctttccaaaaatacccttaatttttaatacaaa 8028417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 8528223 - 8528279
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    ||||||||||||||||||||||||| ||||| |||||| | ||||||  ||||||||    
T  8528223 caattataaaataacacgtggattactaatccatgtcaatgatcgtccctgttaacc 8528279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 37706345 - 37706257
Alignment:
Q  47 ctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||||||||  ||| ||||| |||||| ||  |||| || |||| |||||||| |||||||||||| |||||| ||||||||||    
T  37706345 ctatactatatataaagaaaattacccctttcaacac--ttttgggatgaatttttcttttcaaaaataccctcaattttcaatacaaata 37706257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 48995802 - 48995722
Alignment:
Q  44 aatctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||| |||||||||||  ||||||| | ||||||  ||||||| ||||||| |||||||| |||||||||||| ||||||    
T  48995802 aatctatgctatatataaagaaaactactcctttcaa--catttttgggttgaatttttcttttcaaaaataccctcaatttt 48995722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 14494626 - 14494697
Alignment:
Q  53 tatatataaaaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    |||||| | ||||||| || |||||  ||| |||| ||||| | ||||||||||||||||||||||||||||    
T  14494626 tatataaagaaaactaaccctttcagcacacttttgggttggacttttctttccaaaaatacccttaatttt 14494697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 4474 - 4393
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||| ||||||||||  ||||||||| |||||  | | |||| ||||| | ||||||||||||||||| ||||||||||    
T  4474 atctatattatatataaagaaaactacccctttcagcatacttttgggttggacttttctttccaaaaatatccttaatttt 4393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 237180 - 237225
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  237180 caattataaaataacacgt-gattactaatccatgtcactaatcgtc 237225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 11407087 - 11407125
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  11407087 ttttctttccaaaaataccctcaattttcaatacaaata 11407125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 14245791 - 14245841
Alignment:
Q  85 tttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||| ||||| |||| |||| |||||||||||| ||||||||||||||||    
T  14245791 tttagattgaacttttatttctaaaaatacccttgattttaaatacaaata 14245841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 16143737 - 16143683
Alignment:
Q  81 catttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||| ||||| | ||||||||||||||||| ||| |||||| ||||||||||    
T  16143737 catttttgggttggatttttctttccaaaaatatcctcaattttcaatacaaata 16143683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 8007233 - 8007282
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||| ||||||| |||||||| |||||||||||| |||||| ||||||||    
T  8007233 ttttgggttgaatttttcttttcaaaaataccctcaattttcaatacaaa 8007282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 31844895 - 31844948
Alignment:
Q  82 atttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||| || |||| |||||||||||||||||| || |||||| ||||||||||    
T  31844895 atttttgggctgaatttttctttccaaaaatacgctcaattttcaatacaaata 31844948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 37231389 - 37231304
Alignment:
Q  50 tactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||  ||||||||| ||||| |||  |||| ||||||| |||| |||||||||||  |||||||||| |||| |||||    
T  37231389 tactatatataaagaaaactacccctttcagtac--ttttgggttgaatttttatttccaaaaatgtccttaattttcaatataaata 37231304  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 4972593 - 4972557
Alignment:
Q  99 ttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  4972593 ttcttcccaaaaatactcttaattttaaatacaaata 4972557  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 17605645 - 17605601
Alignment:
Q  91 ttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||| |||| ||| ||||||| ||||||||||||||||||||||    
T  17605645 ttgaatttttattttcaaaaatgcccttaattttaaatacaaata 17605601  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 135
Target Start/End: Original strand, 46879850 - 46879942
Alignment:
Q  43 gaatctatactatatataa--aaaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||||||||  |||| ||||| |||  | |||||||| ||||| | ||||||||| |||| ||||||||| ||| ||| ||||||    
T  46879850 gaatctatactatatataaagaaaattaccccttt--aaacatttttgggttggacttttctttctaaaattacccttaaattttaatgcaaata 46879942  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 52043057 - 52043109
Alignment:
Q  84 ttttaggttgaaattttc-tttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||| |||| ||||| |||| |||||||||||||||||| ||||||||||    
T  52043057 ttttaggctgaatttttcctttctaaaaatacccttaattttcaatacaaata 52043109  T

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Target: scaffold0123 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 17476 - 17395
Alignment:
Q  45 atctatactatatataaa--aaactacccatttcaatacatttttaggttgaaattttctttccaaaaatacccttaatttt 124  Q
    ||||||||||||||||||  ||||||||| |||||| ||| |||| |||||||||||||||||||||||||| |||||||||    
T  17476 atctatactatatataaagaaaactacccctttcaacacacttttgggttgaaattttctttccaaaaatacgcttaatttt 17395  T

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Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 3562 - 3507
Alignment:
Q  139 aattataaaataacacgtggattaataatcaatgtcactaatcgtcattgttaacc 194  Q
    |||||||||||||||||||||||| ||||| || ||||||||||||  ||||||||    
T  3562 aattataaaataacacgtggattactaatccatatcactaatcgtccatgttaacc 3507  T

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Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 56469 - 56515
Alignment:
Q  138 caattataaaataacacgtggattaataatcaatgtcactaatcgtc 184  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  56469 caattataaaataacacgtggattattaatccatgtcactaaacgtc 56515  T

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Target: scaffold0066; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 56329 - 56374
Alignment:
Q  84 ttttaggttgaaattttctttccaaaaatacccttaattttaaata 129  Q
    |||| ||||| | |||||||||||||||||||||||||| ||||||    
T  56329 ttttgggttggacttttctttccaaaaatacccttaattataaata 56374  T

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Target: scaffold0143 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 6013 - 5973
Alignment:
Q  95 aattttctttccaaaaatacccttaattttaaatacaaata 135  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  6013 aattttctttccaaaaatatccttaattttcaatacaaata 5973  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 82119 - 82155
Alignment:
Q  97 ttttctttccaaaaatacccttaattttaaatacaaa 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  82119 ttttctttccaaaaatacccttaatttttaatacaaa 82155  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 135
Target Start/End: Original strand, 48348 - 48376
Alignment:
Q  107 aaaaatacccttaattttaaatacaaata 135  Q
    |||||||||||||||||||||||||||||    
T  48348 aaaaatacccttaattttaaatacaaata 48376  T

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