View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1624_high_60 (Length: 217)
Name: NF1624_high_60
Description: NF1624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1624_high_60 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 45519545 - 45519755
Alignment:
| Q |
1 |
gagtgtatacttttattttattttgttggaattgagtggttgagtataagggaatagaaaaaatacaagtatgttattggtttaatcaaaataatagtgt |
100 |
Q |
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| T |
45519545 |
gagtgtatacttttattttattttgttggaattgagtggttgagtataagggaatagaaaaaatacaagtatgttattggtttaatcaaaagaataatgt |
45519644 |
T |
|
| Q |
101 |
atcatgtgtaatggtttggtgagagggtgtggaatatgccatattgttaattcaagctaattaagtagaagttttggtggatattagtcagattgtgaat |
200 |
Q |
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| T |
45519645 |
attatgtgtaatggtttggtgagagggtgtggaatatgccatattgttaattcaagctaattaagtagaatttttggtggatattagtcagattgtgaat |
45519744 |
T |
|
| Q |
201 |
atggagaatta |
211 |
Q |
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| T |
45519745 |
atggagaatta |
45519755 |
T |
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