View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16255_low_4 (Length: 309)

Name: NF16255_low_4
Description: NF16255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16255_low_4
NF16255_low_4
[»] chr7 (22 HSPs)
chr7 (88-289)||(45841921-45842125)
chr7 (10-52)||(46732611-46732653)
chr7 (10-88)||(34853996-34854082)
chr7 (10-52)||(18520901-18520943)
chr7 (10-52)||(32499293-32499335)
chr7 (10-52)||(32499872-32499914)
chr7 (13-80)||(36620743-36620812)
chr7 (10-52)||(36682879-36682921)
chr7 (10-52)||(47814015-47814057)
chr7 (10-52)||(47814635-47814677)
chr7 (10-83)||(4895082-4895163)
chr7 (10-45)||(22275475-22275510)
chr7 (10-45)||(27855616-27855651)
chr7 (13-52)||(36683467-36683506)
chr7 (10-44)||(4894551-4894585)
chr7 (10-52)||(19816308-19816350)
chr7 (10-44)||(24044043-24044077)
chr7 (10-52)||(30711832-30711874)
chr7 (10-52)||(33806013-33806055)
chr7 (10-44)||(34853443-34853477)
chr7 (10-52)||(46815062-46815104)
chr7 (13-45)||(46012943-46012975)
[»] chr3 (37 HSPs)
chr3 (10-89)||(37374819-37374901)
chr3 (10-89)||(3944894-3944981)
chr3 (10-52)||(48218635-48218677)
chr3 (10-88)||(23584883-23584969)
chr3 (10-88)||(23599706-23599792)
chr3 (10-88)||(25025174-25025260)
chr3 (10-88)||(50687708-50687794)
chr3 (10-52)||(8427743-8427785)
chr3 (10-52)||(23584281-23584323)
chr3 (10-52)||(23599104-23599146)
chr3 (10-52)||(29342385-29342427)
chr3 (10-52)||(29342993-29343035)
chr3 (10-52)||(31014381-31014423)
chr3 (10-52)||(31014924-31014966)
chr3 (10-52)||(42356280-42356322)
chr3 (10-52)||(43658895-43658937)
chr3 (13-88)||(50675128-50675211)
chr3 (10-45)||(19555923-19555958)
chr3 (13-52)||(37374609-37374648)
chr3 (10-45)||(44868618-44868653)
chr3 (10-45)||(47737673-47737708)
chr3 (10-45)||(49752324-49752359)
chr3 (10-52)||(19555314-19555356)
chr3 (10-52)||(25025764-25025806)
chr3 (10-52)||(32672210-32672252)
chr3 (10-52)||(37374009-37374051)
chr3 (10-52)||(38575065-38575107)
chr3 (10-52)||(38575642-38575684)
chr3 (10-44)||(40887941-40887975)
chr3 (10-52)||(41875616-41875658)
chr3 (10-52)||(43103943-43103985)
chr3 (10-52)||(44868051-44868093)
chr3 (10-52)||(55282421-55282463)
chr3 (56-88)||(24221235-24221267)
chr3 (52-88)||(31168573-31168609)
chr3 (16-52)||(50687146-50687182)
chr3 (56-88)||(53269402-53269434)
[»] chr8 (25 HSPs)
chr8 (10-89)||(35237258-35237345)
chr8 (10-52)||(2209050-2209092)
chr8 (10-52)||(7819097-7819139)
chr8 (10-52)||(16880518-16880560)
chr8 (10-88)||(7818474-7818560)
chr8 (10-88)||(33114188-33114274)
chr8 (10-52)||(4374301-4374343)
chr8 (10-52)||(11998500-11998542)
chr8 (10-52)||(16879932-16879974)
chr8 (10-52)||(16889239-16889281)
chr8 (10-52)||(30115411-30115453)
chr8 (10-52)||(36848197-36848239)
chr8 (10-52)||(38778198-38778240)
chr8 (10-52)||(39852198-39852240)
chr8 (10-52)||(40309500-40309542)
chr8 (10-52)||(43591616-43591658)
chr8 (10-52)||(44062029-44062071)
chr8 (10-45)||(40907649-40907684)
chr8 (13-52)||(43481284-43481323)
chr8 (10-52)||(10805992-10806034)
chr8 (10-52)||(11999080-11999122)
chr8 (10-52)||(16889828-16889870)
chr8 (10-52)||(33113619-33113661)
chr8 (10-52)||(39852803-39852845)
chr8 (10-52)||(43480660-43480702)
[»] chr5 (16 HSPs)
chr5 (10-88)||(26688057-26688135)
chr5 (10-88)||(26957788-26957866)
chr5 (10-89)||(3957499-3957586)
chr5 (10-52)||(26687544-26687586)
chr5 (10-52)||(26957275-26957317)
chr5 (13-89)||(4929509-4929593)
chr5 (10-52)||(3739663-3739705)
chr5 (10-52)||(5324403-5324445)
chr5 (10-52)||(33430086-33430128)
chr5 (10-52)||(42408565-42408607)
chr5 (10-88)||(8813683-8813769)
chr5 (10-88)||(28075969-28076055)
chr5 (10-45)||(21770049-21770084)
chr5 (10-52)||(3739044-3739086)
chr5 (10-52)||(4928915-4928957)
chr5 (10-52)||(13738104-13738146)
[»] chr4 (39 HSPs)
chr4 (10-89)||(12639964-12640051)
chr4 (10-89)||(31876787-31876874)
chr4 (10-89)||(199226-199313)
chr4 (10-89)||(2713843-2713930)
chr4 (10-52)||(52597534-52597576)
chr4 (10-88)||(20422731-20422817)
chr4 (10-80)||(25369791-25369869)
chr4 (10-80)||(36945223-36945301)
chr4 (10-88)||(52597711-52597797)
chr4 (10-88)||(55815825-55815911)
chr4 (13-52)||(40345133-40345172)
chr4 (10-52)||(199043-199085)
chr4 (13-88)||(388753-388836)
chr4 (10-52)||(20075569-20075611)
chr4 (10-52)||(20076186-20076228)
chr4 (10-52)||(25370392-25370434)
chr4 (10-52)||(26424404-26424446)
chr4 (10-52)||(28223607-28223649)
chr4 (10-52)||(32291059-32291101)
chr4 (10-52)||(36944654-36944696)
chr4 (10-52)||(40847721-40847763)
chr4 (10-52)||(40848130-40848172)
chr4 (10-52)||(48091095-48091137)
chr4 (10-52)||(55816450-55816492)
chr4 (11-52)||(26423803-26423844)
chr4 (10-88)||(37567474-37567560)
chr4 (11-52)||(47328397-47328438)
chr4 (10-45)||(35427296-35427331)
chr4 (10-45)||(36111217-36111252)
chr4 (13-52)||(48782077-48782116)
chr4 (10-52)||(389405-389447)
chr4 (10-52)||(6862691-6862733)
chr4 (10-44)||(29809087-29809121)
chr4 (10-52)||(32901895-32901937)
chr4 (10-44)||(32902465-32902499)
chr4 (10-48)||(37566951-37566989)
chr4 (11-52)||(33569764-33569805)
chr4 (11-52)||(48090510-48090551)
chr4 (13-45)||(31842726-31842758)
[»] chr2 (26 HSPs)
chr2 (13-87)||(16903092-16903174)
chr2 (10-89)||(9224265-9224352)
chr2 (10-89)||(20244171-20244258)
chr2 (10-88)||(3595895-3595981)
chr2 (10-88)||(4386960-4387046)
chr2 (10-88)||(16571118-16571204)
chr2 (10-88)||(28223788-28223874)
chr2 (10-52)||(7716715-7716757)
chr2 (13-88)||(8963504-8963587)
chr2 (10-52)||(11256160-11256202)
chr2 (10-52)||(17918065-17918107)
chr2 (10-52)||(28224388-28224430)
chr2 (10-52)||(30161977-30162019)
chr2 (10-52)||(39477325-39477367)
chr2 (10-50)||(16887629-16887669)
chr2 (13-52)||(6849332-6849371)
chr2 (13-52)||(6849545-6849584)
chr2 (10-52)||(467149-467191)
chr2 (10-52)||(3595290-3595332)
chr2 (10-52)||(7583793-7583835)
chr2 (10-52)||(10883331-10883373)
chr2 (10-52)||(11256740-11256782)
chr2 (10-52)||(20243597-20243639)
chr2 (10-52)||(40165917-40165959)
chr2 (10-47)||(17918685-17918722)
chr2 (56-88)||(12206788-12206820)
[»] chr1 (25 HSPs)
chr1 (10-88)||(27797736-27797822)
chr1 (10-52)||(52859193-52859235)
chr1 (10-52)||(1403084-1403126)
chr1 (10-52)||(42838981-42839023)
chr1 (10-52)||(48843624-48843666)
chr1 (10-52)||(48843962-48844004)
chr1 (10-52)||(49533787-49533829)
chr1 (10-51)||(6288204-6288245)
chr1 (10-88)||(8560156-8560242)
chr1 (10-88)||(49534396-49534482)
chr1 (12-52)||(27817006-27817046)
chr1 (10-45)||(1403688-1403723)
chr1 (10-45)||(7219648-7219683)
chr1 (10-45)||(8560743-8560778)
chr1 (10-49)||(43368237-43368276)
chr1 (10-44)||(6287672-6287706)
chr1 (10-44)||(27797169-27797203)
chr1 (10-52)||(37725423-37725465)
chr1 (10-44)||(42839548-42839582)
chr1 (10-52)||(42839745-42839787)
chr1 (10-44)||(43368835-43368869)
chr1 (10-52)||(48369526-48369568)
chr1 (10-52)||(51248483-51248525)
chr1 (10-44)||(52859788-52859822)
chr1 (10-51)||(41563792-41563833)
[»] scaffold1095 (1 HSPs)
scaffold1095 (10-52)||(1529-1571)
[»] chr6 (10 HSPs)
chr6 (10-52)||(6032753-6032795)
chr6 (10-80)||(5523208-5523286)
chr6 (10-83)||(12809702-12809783)
chr6 (10-52)||(5523846-5523888)
chr6 (10-52)||(6032202-6032244)
chr6 (10-89)||(13936640-13936727)
chr6 (10-45)||(30610762-30610797)
chr6 (10-52)||(12809113-12809155)
chr6 (10-52)||(30611345-30611387)
chr6 (10-52)||(33668265-33668307)
[»] scaffold0229 (1 HSPs)
scaffold0229 (10-52)||(15233-15275)
[»] scaffold0007 (1 HSPs)
scaffold0007 (10-52)||(11309-11351)
[»] scaffold0368 (1 HSPs)
scaffold0368 (10-52)||(11784-11826)


Alignment Details
Target: chr7 (Bit Score: 158; Significance: 4e-84; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 88 - 289
Target Start/End: Complemental strand, 45842125 - 45841921
Alignment:
Q  88 cactttcaaagcattacaccaataataaaca--agaatagtttagtaaaaatttaaac-acattcattttgaaacgcggatggagtactaacttattcac 184  Q
    ||||||||||||||| |||| ||||||||||  ||||||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||||||||||    
T  45842125 cactttcaaagcatttcaccgataataaacacaagaatagtttagtaaaaatttaaacgacatttattttgaaacgtggatgaaggactaacttattcac 45842026  T
Q  185 atttttattggagggacaggattagtccttcagttaattcaaccagggactaaaacctaaaaacaacaaagctgagagaccgtcgctgctgctctatcgt 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45842025 atttttattggagggacaggattagtccttcagttaattcaaccagggactaaaacctaaaaacaacaaagctgagagaccgtccctgctgctctatcgt 45841926  T
Q  285 tgttg 289  Q
    |||||    
T  45841925 tgttg 45841921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 46732653 - 46732611
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  46732653 aagaatatgttattcacttaatctaatcattgaatccaacttt 46732611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 34853996 - 34854082
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| ||||||||||||||||||||| ||||||||        ||| |||||||||||||||||| ||||||||| ||||    
T  34853996 aagaatatgttcttcacttaatctaatcattgactctaactttcctatggtgggaaaggattaacctttcccatgtgaaatggcacc 34854082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 18520943 - 18520901
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  18520943 aagaatatgttcttcacttaatctaatcattgaatccaacttt 18520901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 32499335 - 32499293
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  32499335 aagaatatgttcttcacttaatctaatcattgaatccaacttt 32499293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 32499872 - 32499914
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  32499872 aagaatatgttcttcacttaatctaatcattgaatccaacttt 32499914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 36620743 - 36620812
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaact--ttggaaaaggattaacctttcccctgtgaa 80  Q
    |||||||| |||||||||||||||||||||||| ||||   ||||||| ||||||||||| || ||||||    
T  36620743 aatatgttcttcacttaatctaatcattgaatccaactccatggaaaatgattaaccttttccatgtgaa 36620812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 36682921 - 36682879
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  36682921 aagaatatgttcttcacttaatctaatcattgaatccaacttt 36682879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 47814057 - 47814015
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  47814057 aagaatatgttcttcacttaatctaatcattgaatccaacttt 47814015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 47814635 - 47814677
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  47814635 aagaatatgttcttcacttaatctaatcattgaatccaacttt 47814677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 4895082 - 4895163
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatg 83  Q
    ||||||||||| ||||||||||||||| |||||||| |||||        ||||||| |||||||||||||| |||||||||    
T  4895082 aagaatatgttcttcacttaatctaataattgaatccaactttcccatggtggaaaatgattaacctttcccatgtgaaatg 4895163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 22275510 - 22275475
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  22275510 aagaatatgttcttcacttaatctaatcattgaatc 22275475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 27855651 - 27855616
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27855651 aagaatatgttcttcacttaatctaatcattgaatc 27855616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 36683467 - 36683506
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  36683467 aatatgttcttcacttaatctaatcattgaatccaacttt 36683506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 4894585 - 4894551
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaat 44  Q
    ||||||||||| |||||||||||||||||||||||    
T  4894585 aagaatatgttcttcacttaatctaatcattgaat 4894551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 19816350 - 19816308
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| | |||||||||||||||||||||| ||||||    
T  19816350 aagaatatgttttacacttaatctaatcattgaatccaacttt 19816308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 24044043 - 24044077
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaat 44  Q
    ||||||||||| |||||||||||||||||||||||    
T  24044043 aagaatatgttcttcacttaatctaatcattgaat 24044077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 30711874 - 30711832
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||    
T  30711874 aagaatatgttcttcacttaatctaataattgaatccaacttt 30711832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 33806055 - 33806013
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||    
T  33806055 aagaatatgttcttcacttaatttaatcattgaatccaacttt 33806013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 34853477 - 34853443
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaat 44  Q
    ||||||||||| |||||||||||||||||||||||    
T  34853477 aagaatatgttcttcacttaatctaatcattgaat 34853443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 46815062 - 46815104
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  46815062 aagaatatgttcttcatttaatctaatcattgaatccaacttt 46815104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 46012943 - 46012975
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatc 45  Q
    |||||||| ||||||||||||||||||||||||    
T  46012943 aatatgttcttcacttaatctaatcattgaatc 46012975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 37374901 - 37374819
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt---ggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    ||||||||||| |||||||||||||||||||||||| ||||||   || |||||||||||||||||| ||||||||| |||||    
T  37374901 aagaatatgttcttcacttaatctaatcattgaatccaactttcccgggaaaggattaacctttcccatgtgaaatgccacca 37374819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 3944981 - 3944894
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| |||||    
T  3944981 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacca 3944894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 48218677 - 48218635
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  48218677 aagaatatgttattcacttaatctaatcattgaatccaacttt 48218635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 23584883 - 23584969
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| ||||    
T  23584883 aagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaaatgccacc 23584969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 23599706 - 23599792
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| ||||    
T  23599706 aagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaaatgccacc 23599792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 25025260 - 25025174
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| ||||    
T  25025260 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatgatgggaaaggattaacctttcccatgtgaaatgccacc 25025174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 50687708 - 50687794
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||| ||||||||||||| ||||||||||||||    
T  50687708 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaagaattaacctttcccatgtgaaatgtcacc 50687794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 8427743 - 8427785
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  8427743 aagaatatgttcttcacttaatctaatcattaaatctaacttt 8427785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 23584323 - 23584281
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  23584323 aagaatatgtttttcacttaatctaatcattgaatcgaacttt 23584281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 23599146 - 23599104
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  23599146 aagaatatgtttttcacttaatctaatcattgaatcgaacttt 23599104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 29342427 - 29342385
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  29342427 aagaatatgttcttcacttaatctaatcattgaatccaacttt 29342385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 29342993 - 29343035
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  29342993 aagaatatgttcttcacttaatctaatcattgaatccaacttt 29343035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 31014423 - 31014381
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  31014423 aagaatatgttcttcacttaatctaatcattgaatccaacttt 31014381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 31014924 - 31014966
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  31014924 aagaatatgttcttcacttaatctaatcattgaatccaacttt 31014966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 42356322 - 42356280
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  42356322 aagaatatgttcttcacttaatctaatcattgaatccaacttt 42356280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 43658895 - 43658937
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  43658895 aagaatatgttcttcacttaatctaatcattgaatccaacttt 43658937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 50675128 - 50675211
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaacttt--------ggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    |||||||| |||||||||||||||||||||||  ||||||        | ||||||||||||||||||| ||||||||||||||    
T  50675128 aatatgttcttcacttaatctaatcattgaattcaactttcccattgtgaaaaaggattaacctttcccatgtgaaatgtcacc 50675211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 19555923 - 19555958
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19555923 aagaatatgttcttcacttaatctaatcattgaatc 19555958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 37374609 - 37374648
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  37374609 aatatgttcttcacttaatctaatcattgaatccaacttt 37374648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 44868618 - 44868653
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  44868618 aagaatatgttcttcacttaatctaatcattgaatc 44868653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 47737673 - 47737708
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  47737673 aagaatatgttcttcacttaatctaatcattgaatc 47737708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 49752359 - 49752324
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  49752359 aagaatatgttcttcacttaatctaatcattgaatc 49752324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 19555356 - 19555314
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||    
T  19555356 aagaatatgttcttcacttaatctaatcatttaatccaacttt 19555314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 25025764 - 25025806
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||    
T  25025764 aagaatatgttcttctcttaatctaatcattgaatcaaacttt 25025806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 32672252 - 32672210
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||    
T  32672252 aagaatatgttcttcacttaatctaatcattaaatccaacttt 32672210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 37374051 - 37374009
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||    
T  37374051 aagaatatgttcttcacttaatttaatcattgaatccaacttt 37374009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 38575107 - 38575065
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  38575107 aagaatatgttcttcatttaatctaatcattgaatccaacttt 38575065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 38575642 - 38575684
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||    
T  38575642 aagaatatgttcttcacttaatttaatcattgaatccaacttt 38575684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 40887941 - 40887975
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaat 44  Q
    ||||||||||| |||||||||||||||||||||||    
T  40887941 aagaatatgttcttcacttaatctaatcattgaat 40887975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 41875616 - 41875658
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||| | ||||||    
T  41875616 aagaatatgttcttcacttaatctaatcattgaacccaacttt 41875658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 43103985 - 43103943
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||    
T  43103985 aagaatatgttattcacttaatccaatcgttgaatccaacttt 43103943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 44868093 - 44868051
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| || ||||||||||||||||||||| ||||||    
T  44868093 aagaatatgttctttacttaatctaatcattgaatccaacttt 44868051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 55282421 - 55282463
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||    
T  55282421 aagaatatgttcttcacttaatctaatcattaaatccaacttt 55282463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 24221235 - 24221267
Alignment:
Q  56 aaaggattaacctttcccctgtgaaatgtcacc 88  Q
    |||||||||||||||||| ||||||||||||||    
T  24221235 aaaggattaacctttcccatgtgaaatgtcacc 24221267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 31168573 - 31168609
Alignment:
Q  52 tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  31168573 tggaaaaggattaacctttcccatgtaaaatgtcacc 31168609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 50687182 - 50687146
Alignment:
Q  16 atgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  50687182 atgttattcacttaatctaattattgaatccaacttt 50687146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 53269402 - 53269434
Alignment:
Q  56 aaaggattaacctttcccctgtgaaatgtcacc 88  Q
    |||||||||||||||||| ||||||||||||||    
T  53269402 aaaggattaacctttcccatgtgaaatgtcacc 53269434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 35237345 - 35237258
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    |||||||||||||||||||||||||||||||||||| |||||        ||| |||||||||||||||||| |||||||||||||||    
T  35237345 aagaatatgttattcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgtcacca 35237258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 2209092 - 2209050
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  2209092 aagaatatgttattcacttaatctaatcattgaatcgaacttt 2209050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 7819097 - 7819139
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  7819097 aagaatatgttcttcacttaatctaatcattgaatctaacttt 7819139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 16880518 - 16880560
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  16880518 aagaatatgttcttcacttaatctaatcattgaatctaacttt 16880560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 7818560 - 7818474
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| ||||    
T  7818560 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 7818474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 33114188 - 33114274
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| ||||    
T  33114188 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 33114274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 4374301 - 4374343
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  4374301 aagaatatgttcttcacttaatctaatcattgaatccaacttt 4374343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 11998542 - 11998500
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  11998542 aagaatatgttcttcacttaatctaatcattgaatccaacttt 11998500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 16879974 - 16879932
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  16879974 aagaatatgttcttcacttaatctaatcattgaatccaacttt 16879932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 16889281 - 16889239
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  16889281 aagaatatgttcttcacttaatctaatcattgaatccaacttt 16889239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 30115453 - 30115411
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  30115453 aagaatatgttcttcacttaatctaatcattgaatccaacttt 30115411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 36848197 - 36848239
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  36848197 aagaatatgttcttcacttaatctaatcattgaatccaacttt 36848239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 38778240 - 38778198
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  38778240 aagaatatgttcttcacttaatctaatcattgaatccaacttt 38778198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 39852240 - 39852198
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  39852240 aagaatatgttcttcacttaatctaatcattgaatcaaacttt 39852198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 40309500 - 40309542
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  40309500 aagaatatgttcttcacttaatctaatcattgaatccaacttt 40309542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 43591616 - 43591658
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  43591616 aagaatatgttcttcacttaatctaatcattgactctaacttt 43591658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 44062071 - 44062029
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  44062071 aagaatatgttcttcacttaatctaatcattgaatccaacttt 44062029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 40907684 - 40907649
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  40907684 aagaatatgttcttcacttaatctaatcattgaatc 40907649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 43481284 - 43481323
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  43481284 aatatgttcttcacttaatctaatcattgaatccaacttt 43481323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 10806034 - 10805992
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  10806034 aagaatatgttcttcatttaatctaatcattgaatccaacttt 10805992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 11999080 - 11999122
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||    
T  11999080 aagaatatgttcttcacttcatctaatcattgaatccaacttt 11999122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 16889828 - 16889870
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||    
T  16889828 aagaatatgttcttcacttaatctaataattgaatccaacttt 16889870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 33113661 - 33113619
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| || |||||||||||||||||||||||| ||||||    
T  33113661 aagaatatattcttcacttaatctaatcattgaatccaacttt 33113619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 39852803 - 39852845
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| || ||||||||||||||| |||||||||||||||    
T  39852803 aagaatatattcttcacttaatctaataattgaatctaacttt 39852845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 43480702 - 43480660
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||    
T  43480702 aagaatatgttcttcacttaatctaatcatttaatccaacttt 43480660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 26688057 - 26688135
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactttggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||| |||||||||||||||    ||| |||||||||||||||||| ||||||||| ||||    
T  26688057 aagaatatgttcttcacttaatataatcattgaatctagtggtgggaaaggattaacctttcccatgtgaaatgccacc 26688135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 26957788 - 26957866
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactttggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||| |||||||||||||||    ||| |||||||||||||||||| ||||||||| ||||    
T  26957788 aagaatatgttcttcacttaatataatcattgaatctagtggtgggaaaggattaacctttcccatgtgaaatgccacc 26957866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 3957586 - 3957499
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| |||||    
T  3957586 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacca 3957499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 26687586 - 26687544
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  26687586 aagaatatgttcttcacttaatctaatcattgaatctaacttt 26687544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 26957317 - 26957275
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  26957317 aagaatatgttcttcacttaatctaatcattgaatctaacttt 26957275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 4929509 - 4929593
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaacttt--------ggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    ||||| || |||||||||||||||||||||||| ||||||        ||||||||||||||||||||| ||||||||| |||||    
T  4929509 aatatattcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaaatgccacca 4929593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 3739663 - 3739705
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  3739663 aagaatatgttcttcacttaatctaatcattgaatccaacttt 3739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 5324403 - 5324445
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  5324403 aagaatatgttcttcacttaatctaatcattgaatccaacttt 5324445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 33430128 - 33430086
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  33430128 aagaatatgttcttcacttaatctaatcattgaatccaacttt 33430086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 42408565 - 42408607
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  42408565 aagaatatgttcttcacttaatctaatcattgaatccaacttt 42408607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 8813683 - 8813769
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| || ||||||||||||||||||||| |||||        |||||||||||||||||||||| | ||||||| ||||    
T  8813683 aagaatatgttctttacttaatctaatcattgaatccaactttcccatgatggaaaaggattaacctttcccatatgaaatgccacc 8813769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 28075969 - 28076055
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    |||||||| || |||||||||||||||||||||||| |||||        ||||||| ||||||||||| || ||||||||||||||    
T  28075969 aagaatatatttttcacttaatctaatcattgaatccaactttcccatggtggaaaatgattaaccttttccatgtgaaatgtcacc 28076055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 21770084 - 21770049
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  21770084 aagaatatgttcttcacttaatctaatcattgaatc 21770049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 3739086 - 3739044
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| || |||||||||||||||||||||||| ||||||    
T  3739086 aagaatatatttttcacttaatctaatcattgaatccaacttt 3739044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 4928957 - 4928915
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||    
T  4928957 aagaatatgttcttcacttaatctaatcattaaatccaacttt 4928915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 13738146 - 13738104
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||    
T  13738146 aagaatatgttcttcacttaatccaatcattgaatccaacttt 13738104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 12640051 - 12639964
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    ||||||||||| |||||||||||||||||||||||| |||||        |||||||||||||||||||||| ||||||||| |||||    
T  12640051 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaaatgccacca 12639964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 31876874 - 31876787
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    ||||||||||| |||||||||||||||||||||||| |||||        |||||||||||||||||||||| ||||||||| |||||    
T  31876874 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaacctttcccatgtgaaatgccacca 31876787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 199226 - 199313
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| |||||    
T  199226 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacca 199313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 2713843 - 2713930
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| |||||    
T  2713843 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgccacca 2713930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 52597576 - 52597534
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  52597576 aagaatatgttcttcacttaatctaatcattgaatctaacttt 52597534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 20422731 - 20422817
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        |||||||||||||| ||||||| ||||||||| ||||    
T  20422731 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgtgaaatgccacc 20422817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 25369869 - 25369791
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaa 80  Q
    ||||||||||| |||||||||||||||||||||||| |||||        |||||||||||||||||||||| ||||||    
T  25369869 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtggaaaaggattaacctttcccatgtgaa 25369791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 36945223 - 36945301
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaa 80  Q
    ||||||||||| |||||||||||||||||||||||| |||||        |||||||||||||||||||||| ||||||    
T  36945223 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaa 36945301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 52597711 - 52597797
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        || ||||||||||||||||||| ||||||||| ||||    
T  52597711 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgaaaaaggattaacctttcccatgtgaaatgccacc 52597797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 55815911 - 55815825
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| ||||    
T  55815911 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtgaaatgccacc 55815825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 40345133 - 40345172
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  40345133 aatatgttcttcacttaatctaatcattgaatctaacttt 40345172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 199085 - 199043
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  199085 aagaatatgttcttcacttaatctaatcattgaatttaacttt 199043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 388836 - 388753
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    |||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| ||||    
T  388836 aatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 388753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 20075611 - 20075569
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  20075611 aagaatatgttcttcacttaatctaatcattgaatccaacttt 20075569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 20076186 - 20076228
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  20076186 aagaatatgttcttcacttaatctaatcattgaatccaacttt 20076228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 25370392 - 25370434
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  25370392 aagaatatgttcttcacttaatctaatcattgaatccaacttt 25370434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 26424404 - 26424446
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  26424404 aagaatatgttcttcacttaatctaatcattgaatccaacttt 26424446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 28223649 - 28223607
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  28223649 aagaatatgttcttcacttaatctaatcattgaatccaacttt 28223607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 32291101 - 32291059
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  32291101 aagaatatgttcttcacttaatctaatcattgaatccaacttt 32291059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 36944696 - 36944654
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  36944696 aagaatatgttcttcacttaatctaatcattgaatccaacttt 36944654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 40847763 - 40847721
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  40847763 aagaatatgttcttcacttaatctaatcattgaatccaacttt 40847721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 40848130 - 40848172
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  40848130 aagaatatgttcttcacttaatctaatcattgaatcaaacttt 40848172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 48091095 - 48091137
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  48091095 aagaatatgttcttcacttaatctaatcattgaatccaacttt 48091137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 55816450 - 55816492
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  55816450 aagaatatgttcttcacttaatctaatcattgaatccaacttt 55816492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 26423844 - 26423803
Alignment:
Q  11 agaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  26423844 agaatatgttcttcacttaatctaatcattgaatccaacttt 26423803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 37567474 - 37567560
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| || ||||||||||||||||||||| |||||        |||||||| ||||||||||||| ||||||||| ||||    
T  37567474 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaagtattaacctttcccatgtgaaatgacacc 37567560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 47328397 - 47328438
Alignment:
Q  11 agaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||||| ||||||||||||||| |||||||||||||||    
T  47328397 agaatatgttcttcacttaatctaattattgaatctaacttt 47328438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 35427331 - 35427296
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35427331 aagaatatgttcttcacttaatctaatcattgaatc 35427296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 36111217 - 36111252
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  36111217 aagaatatgttcttcacttaatctaatcattgaatc 36111252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 48782077 - 48782116
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  48782077 aatatgttcttcacttaatctaatcattgaatccaacttt 48782116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 389405 - 389447
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||    
T  389405 aagaatatgttcttcacttaatctaatcactgaatccaacttt 389447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 6862733 - 6862691
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||    
T  6862733 aagaatatgttcttcacttaatctaatctttgaatccaacttt 6862691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 29809087 - 29809121
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaat 44  Q
    ||||||||||| |||||||||||||||||||||||    
T  29809087 aagaatatgttcttcacttaatctaatcattgaat 29809121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 32901937 - 32901895
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| || ||||||||||||||||||||| ||||||    
T  32901937 aagaatatgttctttacttaatctaatcattgaatccaacttt 32901895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 32902465 - 32902499
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaat 44  Q
    ||||||||||| |||||||||||||||||||||||    
T  32902465 aagaatatgttcttcacttaatctaatcattgaat 32902499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 37566989 - 37566951
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaa 48  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  37566989 aagaatatgttcttcacttaatttaatcattgaatctaa 37566951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 33569805 - 33569764
Alignment:
Q  11 agaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||||| ||||||||||||||| |||||||| ||||||    
T  33569805 agaatatgttcttcacttaatctaattattgaatccaacttt 33569764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 48090551 - 48090510
Alignment:
Q  11 agaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||||| | |||||||||||||||||||||| ||||||    
T  48090551 agaatatgttctacacttaatctaatcattgaatccaacttt 48090510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 31842726 - 31842758
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatc 45  Q
    |||||||| ||||||||||||||||||||||||    
T  31842726 aatatgttcttcacttaatctaatcattgaatc 31842758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 16903092 - 16903174
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcac 87  Q
    ||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||| ||| |||||||||    
T  16903092 aatatgttattcacttaatctaatcattgaatccaactttctcatggtggaaaaggattaacctttcccatgtaaaatgtcac 16903174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 9224352 - 9224265
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| |||||    
T  9224352 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacca 9224265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 20244171 - 20244258
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| |||||    
T  20244171 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgccacca 20244258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 3595895 - 3595981
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        || |||||||||||| |||||| ||||||||||||||    
T  3595895 aagaatatgtttttcacttaatctaatcattgaatccaacttttccatgatgaaaaaggattaacatttcccatgtgaaatgtcacc 3595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 4386960 - 4387046
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| ||||    
T  4386960 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 4387046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 16571204 - 16571118
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| ||||    
T  16571204 aagaatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatggcacc 16571118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 28223874 - 28223788
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| ||||    
T  28223874 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaaggattaacctttcccatgtgaaatgccacc 28223788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 7716757 - 7716715
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  7716757 aagaatatgttcttcacttaatctaatcattgaatccaacttt 7716715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 8963587 - 8963504
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    |||||||| |||||||||||||||||||||||| |||||        | |||||||||||||||||||| ||||||||| ||||    
T  8963587 aatatgtttttcacttaatctaatcattgaatccaactttcccatgatagaaaaggattaacctttcccatgtgaaatgccacc 8963504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 11256202 - 11256160
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  11256202 aagaatatgttcttcacttaatctaatcattgaatccaacttt 11256160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 17918107 - 17918065
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| || |||||||||||||||||||||||||||||||    
T  17918107 aagaatatattcttcacttaatctaatcattgaatctaacttt 17918065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 28224388 - 28224430
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  28224388 aagaatatgttcttcacttaatctaatcattgaatccaacttt 28224430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 30162019 - 30161977
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  30162019 aagaatatgttcttcacttaatctaatcattgaatccaacttt 30161977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 39477325 - 39477367
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  39477325 aagaatatgttcttcacttaatctaatcattgaatccaacttt 39477367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 16887669 - 16887629
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaact 50  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  16887669 aagaatatgttcttcacttaatctaatcattgaatccaact 16887629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 6849371 - 6849332
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  6849371 aatatgttcttcacttaatctaatcattgaatccaacttt 6849332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 6849545 - 6849584
Alignment:
Q  13 aatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  6849545 aatatgttcttcacttaatctaatcattgaatccaacttt 6849584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 467191 - 467149
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||    
T  467191 aagaatatgttcttcacttaatttaatcattgaatccaacttt 467149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 3595332 - 3595290
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||    
T  3595332 aagaatatgttcttcactttatctaatcattgaatccaacttt 3595290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 7583793 - 7583835
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||    
T  7583793 aagaatatgttcttcacttaagctaatcattgaatccaacttt 7583835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 10883373 - 10883331
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| || ||||||||||||||||||||| ||||||    
T  10883373 aagaatatgttctttacttaatctaatcattgaatccaacttt 10883331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 11256740 - 11256782
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| || |||||||||||||||||||||||| ||||||    
T  11256740 aagaatatattcttcacttaatctaatcattgaatccaacttt 11256782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 20243639 - 20243597
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||| || |||||||||||||||||||||||| ||||||    
T  20243639 aagaatatattcttcacttaatctaatcattgaatccaacttt 20243597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 40165959 - 40165917
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||    
T  40165959 aagaatatgttcttcacttaatccaatcattgaatccaacttt 40165917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 17918685 - 17918722
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatcta 47  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  17918685 aagaatatgttcttcacttaatctaataattgaatcta 17918722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 12206820 - 12206788
Alignment:
Q  56 aaaggattaacctttcccctgtgaaatgtcacc 88  Q
    |||||||||||||||||| ||||||||||||||    
T  12206820 aaaggattaacctttcccatgtgaaatgtcacc 12206788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 27797736 - 27797822
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| ||||||||||||||||||||| ||||||||        |||||||||||||||||||||| ||||||||| ||||    
T  27797736 aagaatatgttcttcacttaatctaatcattgactctaactttcccatagtggaaaaggattaacctttcccatgtgaaatggcacc 27797822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 52859235 - 52859193
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  52859235 aagaatatgttattcatttaatctaatcattgaatctaacttt 52859193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 1403126 - 1403084
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  1403126 aagaatatgttcttcacttaatctaatcattgaatccaacttt 1403084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 42839023 - 42838981
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  42839023 aagaatatgttcttcacttaatctaatcattgactctaacttt 42838981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 48843666 - 48843624
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  48843666 aagaatatgttattcacttaatataatcattgaatccaacttt 48843624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 48843962 - 48844004
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  48843962 aagaatatgttcttcacttaatctaatcattgaatccaacttt 48844004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 49533829 - 49533787
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  49533829 aagaatatgttcttcacttaatctaatcattgaatccaacttt 49533787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 6288204 - 6288245
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt 51  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  6288204 aagaatatgttcttcacttaatctaatcattgaatccaactt 6288245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 8560242 - 8560156
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt--------ggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| |||||||||||||||| ||||||| ||| ||        ||||||||||||||||||||| ||||||||| ||||    
T  8560242 aagaatatgttcttcacttaatctaatctttgaatccaacattcccatggtggaaaaggattaacctttcccatgtgaaatgccacc 8560156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 49534396 - 49534482
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacc 88  Q
    ||||||||||| || ||||||||||||||||||||| |||||        ||| |||||||||||||||||| ||||||||| ||||    
T  49534396 aagaatatgtttttaacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgccacc 49534482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 27817006 - 27817046
Alignment:
Q  12 gaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  27817006 gaatatgttcttcacttaatctaatcattgaatccaacttt 27817046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 1403688 - 1403723
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1403688 aagaatatgttcttcacttaatctaatcattgaatc 1403723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 7219648 - 7219683
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  7219648 aagaatatgttcttcacttaatctaatcattgaatc 7219683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 8560743 - 8560778
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8560743 aagaatatgttcttcacttaatctaatcattgaatc 8560778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 43368276 - 43368237
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaac 49  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  43368276 aagaatatgttcttcacttaatttaatcattgaatctaac 43368237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 6287706 - 6287672
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaat 44  Q
    ||||||||||| |||||||||||||||||||||||    
T  6287706 aagaatatgttcttcacttaatctaatcattgaat 6287672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 27797203 - 27797169
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaat 44  Q
    ||||||||||| |||||||||||||||||||||||    
T  27797203 aagaatatgttcttcacttaatctaatcattgaat 27797169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 37725465 - 37725423
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||    
T  37725465 aagaatatgttcttcacttaatctaatgattgaatccaacttt 37725423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 42839548 - 42839582
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaat 44  Q
    ||||||||||| |||||||||||||||||||||||    
T  42839548 aagaatatgttcttcacttaatctaatcattgaat 42839582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 42839787 - 42839745
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||| |||||||| |||||||||    
T  42839787 aagaatatgttcttcacttaatctgatcattgactctaacttt 42839745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 43368835 - 43368869
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaat 44  Q
    ||||||||||| |||||||||||||||||||||||    
T  43368835 aagaatatgttcttcacttaatctaatcattgaat 43368869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 48369568 - 48369526
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||    
T  48369568 aagaatatgttcttcacttaatccaatcattgaatccaacttt 48369526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 51248483 - 51248525
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||    
T  51248483 aagaatatgttcttcacttaatctaattattgaatcaaacttt 51248525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 52859788 - 52859822
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaat 44  Q
    ||||||||||| |||||||||||||||||||||||    
T  52859788 aagaatatgttcttcacttaatctaatcattgaat 52859822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 41563792 - 41563833
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt 51  Q
    ||||||||||| ||||||||||||||| |||||||| |||||    
T  41563792 aagaatatgttcttcacttaatctaataattgaatccaactt 41563833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 1571 - 1529
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  1571 aagaatatgttattcacttaatctaatcattgaatccaacttt 1529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 6032753 - 6032795
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  6032753 aagaatatgttcttcacttaatctaatcattgaatctaacttt 6032795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 5523286 - 5523208
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaa 80  Q
    ||||||||||| |||||||||||||||||||||||| |||||        |||||||||||||||||||||| ||||||    
T  5523286 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtggaaaaggattaacctttcccatgtgaa 5523208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 12809702 - 12809783
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatg 83  Q
    ||||||||||| |||||||||||||||||||||||| |||||        ||| |||||||||||||||||| |||||||||    
T  12809702 aagaatatgttcttcacttaatctaatcattgaatccaactttcccaccatgggaaaggattaacctttcccatgtgaaatg 12809783  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 5523846 - 5523888
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  5523846 aagaatatgttcttcacttaatctaatcattgaatcaaacttt 5523888  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 6032244 - 6032202
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  6032244 aagaatatgttcttcacttaatctaatcattgaatccaacttt 6032202  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 13936640 - 13936727
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaactt--------tggaaaaggattaacctttcccctgtgaaatgtcacca 89  Q
    ||||||||||| || |||||||||||||||||| ||||||||        ||| |||||||||||||||||| ||||||||| |||||    
T  13936640 aagaatatgttctttacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttcccatgtgaaatggcacca 13936727  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 30610797 - 30610762
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatc 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  30610797 aagaatatgttcttcacttaatctaatcattgaatc 30610762  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 12809155 - 12809113
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||    
T  12809155 aagaatatgttcttcacttaatctaatcattgcatccaacttt 12809113  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 30611345 - 30611387
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  30611345 aagaatatgttcttcagttaatctaatcattgaatccaacttt 30611387  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 33668307 - 33668265
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||    
T  33668307 aagaatatgttcttcacttaatttaatcattgaatccaacttt 33668265  T

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Target: scaffold0229 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 15233 - 15275
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  15233 aagaatatgttcttcacttaatctaatcattgaatccaacttt 15275  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 11351 - 11309
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  11351 aagaatatgttcttcacttaatctaatcattgaatccaacttt 11309  T

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Target: scaffold0368 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 11784 - 11826
Alignment:
Q  10 aagaatatgttattcacttaatctaatcattgaatctaacttt 52  Q
    ||||||||||| |||||||||||| |||||||| |||||||||    
T  11784 aagaatatgttcttcacttaatctgatcattgactctaacttt 11826  T

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