View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16255_low_5 (Length: 303)
Name: NF16255_low_5
Description: NF16255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16255_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 104 - 232
Target Start/End: Complemental strand, 35748719 - 35748591
Alignment:
| Q |
104 |
tatatattgaaattttttcactttcgaagtgttgaatcaggagctaacccaccaccaaggcgtatcttatcaacataattcctaacttcctctgctatca |
203 |
Q |
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| T |
35748719 |
tatatattgaaattttttcactttcgaagtgttgaatcaggagctaacccaccaccaaggcgcatcttatcaacataattcctaacttcctctgctatca |
35748620 |
T |
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| Q |
204 |
tgcgctgaagcatcgacctcaatttctca |
232 |
Q |
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| T |
35748619 |
tgcgctgaagcatcgacctcaatttctca |
35748591 |
T |
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