View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16256_low_16 (Length: 433)

Name: NF16256_low_16
Description: NF16256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16256_low_16
NF16256_low_16
[»] chr4 (43 HSPs)
chr4 (111-415)||(47388485-47388789)
chr4 (108-252)||(49250017-49250161)
chr4 (100-252)||(26740770-26740922)
chr4 (97-242)||(55322929-55323074)
chr4 (97-252)||(50328350-50328505)
chr4 (97-252)||(53133476-53133631)
chr4 (162-258)||(46393216-46393312)
chr4 (118-253)||(17340346-17340481)
chr4 (97-226)||(31204313-31204442)
chr4 (97-225)||(42674027-42674155)
chr4 (119-250)||(4442251-4442382)
chr4 (97-253)||(37056184-37056341)
chr4 (97-225)||(41236021-41236149)
chr4 (119-252)||(45219917-45220052)
chr4 (101-223)||(45891303-45891425)
chr4 (124-253)||(34291270-34291399)
chr4 (161-250)||(45088201-45088290)
chr4 (125-208)||(16067794-16067877)
chr4 (97-226)||(34118904-34119033)
chr4 (125-222)||(8171079-8171177)
chr4 (162-252)||(12799923-12800013)
chr4 (155-224)||(5807359-5807428)
chr4 (97-182)||(31216952-31217037)
chr4 (130-223)||(48622251-48622344)
chr4 (142-253)||(31861104-31861216)
chr4 (126-261)||(14593565-14593700)
chr4 (162-243)||(2554072-2554153)
chr4 (163-224)||(12798205-12798266)
chr4 (101-172)||(9319892-9319963)
chr4 (97-200)||(24453162-24453265)
chr4 (165-243)||(21894791-21894869)
chr4 (97-173)||(38354281-38354357)
chr4 (142-202)||(47228772-47228832)
chr4 (97-152)||(966700-966755)
chr4 (205-252)||(29508787-29508834)
chr4 (209-255)||(22019516-22019562)
chr4 (216-246)||(41460535-41460565)
chr4 (213-246)||(22409468-22409501)
chr4 (115-208)||(33176496-33176589)
chr4 (205-246)||(50297634-50297675)
chr4 (162-242)||(19904452-19904531)
chr4 (210-246)||(28675682-28675718)
chr4 (213-253)||(45891908-45891948)
[»] chr2 (29 HSPs)
chr2 (97-252)||(44966000-44966155)
chr2 (97-249)||(40711152-40711304)
chr2 (162-254)||(41542733-41542825)
chr2 (97-252)||(31663375-31663529)
chr2 (125-252)||(44022139-44022266)
chr2 (142-252)||(34929172-34929282)
chr2 (140-252)||(6461219-6461331)
chr2 (170-241)||(2080516-2080587)
chr2 (97-234)||(25220749-25220886)
chr2 (98-226)||(27269100-27269230)
chr2 (142-255)||(25396896-25397009)
chr2 (142-225)||(33025226-33025309)
chr2 (165-243)||(12972694-12972772)
chr2 (119-224)||(31742702-31742807)
chr2 (162-250)||(17696021-17696107)
chr2 (142-241)||(20203615-20203714)
chr2 (149-208)||(32644835-32644894)
chr2 (97-226)||(14839619-14839747)
chr2 (162-223)||(34504254-34504315)
chr2 (170-226)||(41464086-41464142)
chr2 (101-218)||(8996541-8996659)
chr2 (124-208)||(16721593-16721677)
chr2 (215-246)||(44721350-44721381)
chr2 (205-247)||(1705089-1705131)
chr2 (170-243)||(30545560-30545631)
chr2 (142-252)||(34242588-34242696)
chr2 (213-246)||(14776275-14776308)
chr2 (213-246)||(32656247-32656280)
chr2 (147-224)||(34373516-34373593)
[»] chr6 (19 HSPs)
chr6 (97-252)||(33755407-33755562)
chr6 (97-253)||(2616999-2617155)
chr6 (97-251)||(24547962-24548114)
chr6 (116-252)||(13243775-13243911)
chr6 (101-251)||(2359663-2359813)
chr6 (124-254)||(4844440-4844570)
chr6 (98-244)||(2557258-2557405)
chr6 (97-250)||(9429545-9429698)
chr6 (101-249)||(17515309-17515457)
chr6 (142-252)||(3159570-3159680)
chr6 (155-253)||(9318780-9318880)
chr6 (119-251)||(3337656-3337787)
chr6 (133-226)||(11842268-11842361)
chr6 (100-191)||(30323079-30323170)
chr6 (127-254)||(13656991-13657119)
chr6 (170-243)||(7509642-7509715)
chr6 (97-202)||(2615115-2615220)
chr6 (213-252)||(9456166-9456205)
chr6 (200-248)||(31948826-31948874)
[»] chr5 (39 HSPs)
chr5 (97-257)||(19961549-19961711)
chr5 (97-253)||(36527422-36527577)
chr5 (97-249)||(40298236-40298388)
chr5 (97-249)||(1860136-1860289)
chr5 (98-252)||(25983059-25983213)
chr5 (114-243)||(14575911-14576040)
chr5 (97-250)||(15591634-15591787)
chr5 (128-247)||(1352809-1352928)
chr5 (102-253)||(30685577-30685728)
chr5 (100-249)||(4746048-4746197)
chr5 (142-250)||(7406197-7406305)
chr5 (149-252)||(28574793-28574896)
chr5 (102-190)||(30721399-30721487)
chr5 (97-197)||(33208415-33208515)
chr5 (119-244)||(8234022-8234146)
chr5 (97-254)||(14622424-14622582)
chr5 (97-226)||(1355773-1355903)
chr5 (97-211)||(3938402-3938516)
chr5 (149-226)||(42179787-42179863)
chr5 (162-246)||(29429686-29429770)
chr5 (101-252)||(13951073-13951224)
chr5 (99-251)||(42011257-42011404)
chr5 (109-224)||(25693664-25693782)
chr5 (142-253)||(41816494-41816605)
chr5 (170-244)||(12289088-12289162)
chr5 (172-250)||(3257407-3257482)
chr5 (180-252)||(41318139-41318210)
chr5 (165-246)||(5984559-5984640)
chr5 (148-188)||(10083769-10083809)
chr5 (100-243)||(16843895-16844039)
chr5 (97-217)||(18334397-18334517)
chr5 (97-200)||(14309930-14310033)
chr5 (166-208)||(4702614-4702656)
chr5 (162-244)||(30784221-30784302)
chr5 (205-246)||(554285-554326)
chr5 (205-246)||(29557595-29557636)
chr5 (162-243)||(37833842-37833922)
chr5 (170-246)||(141395-141471)
chr5 (216-244)||(3344865-3344893)
[»] chr7 (27 HSPs)
chr7 (97-250)||(23358452-23358605)
chr7 (101-252)||(23363754-23363903)
chr7 (145-252)||(36827786-36827893)
chr7 (97-252)||(48633897-48634052)
chr7 (162-252)||(42306248-42306338)
chr7 (125-252)||(17354395-17354522)
chr7 (97-243)||(37828345-37828492)
chr7 (97-251)||(43251852-43252005)
chr7 (147-252)||(31289441-31289546)
chr7 (108-252)||(25971454-25971593)
chr7 (142-246)||(676282-676388)
chr7 (97-253)||(40019735-40019890)
chr7 (106-226)||(20009654-20009773)
chr7 (116-251)||(25594582-25594716)
chr7 (97-218)||(48046893-48047012)
chr7 (165-250)||(3622276-3622361)
chr7 (114-193)||(48339725-48339802)
chr7 (97-251)||(3767108-3767263)
chr7 (142-214)||(11885442-11885514)
chr7 (170-246)||(42121404-42121480)
chr7 (195-249)||(32903088-32903142)
chr7 (127-187)||(43951920-43951980)
chr7 (170-225)||(27772914-27772969)
chr7 (170-243)||(48723234-48723307)
chr7 (190-246)||(39983188-39983244)
chr7 (170-225)||(26715149-26715204)
chr7 (205-246)||(32546829-32546870)
[»] chr1 (29 HSPs)
chr1 (98-255)||(51295692-51295848)
chr1 (97-252)||(10881805-10881961)
chr1 (142-254)||(43949134-43949246)
chr1 (101-252)||(29587100-29587251)
chr1 (97-252)||(34710890-34711045)
chr1 (142-259)||(18436283-18436400)
chr1 (97-208)||(33828093-33828204)
chr1 (97-208)||(33839761-33839872)
chr1 (109-252)||(51050028-51050170)
chr1 (97-250)||(42549167-42549320)
chr1 (129-222)||(44595706-44595799)
chr1 (97-219)||(39275847-39275969)
chr1 (97-243)||(24466519-24466667)
chr1 (101-252)||(18023760-18023911)
chr1 (142-252)||(15401721-15401831)
chr1 (151-252)||(36313612-36313713)
chr1 (97-223)||(15279008-15279135)
chr1 (142-244)||(31262430-31262532)
chr1 (98-202)||(19569046-19569151)
chr1 (194-252)||(39412436-39412494)
chr1 (162-233)||(46056815-46056886)
chr1 (162-260)||(42728117-42728214)
chr1 (165-249)||(46587789-46587870)
chr1 (213-251)||(47588527-47588565)
chr1 (213-243)||(47762714-47762744)
chr1 (213-246)||(298202-298235)
chr1 (210-267)||(41884595-41884652)
chr1 (214-246)||(32544775-32544807)
chr1 (162-222)||(46220644-46220704)
[»] chr8 (23 HSPs)
chr8 (97-252)||(39108515-39108670)
chr8 (140-252)||(4993209-4993321)
chr8 (97-251)||(32062274-32062427)
chr8 (97-232)||(40740692-40740827)
chr8 (97-252)||(4989195-4989352)
chr8 (114-252)||(44976091-44976228)
chr8 (148-255)||(3727115-3727222)
chr8 (97-250)||(8669378-8669531)
chr8 (147-261)||(43027809-43027923)
chr8 (97-189)||(5957038-5957130)
chr8 (100-218)||(36434673-36434792)
chr8 (135-252)||(10361103-10361220)
chr8 (142-251)||(38666419-38666526)
chr8 (97-248)||(19174068-19174220)
chr8 (142-252)||(42655032-42655140)
chr8 (149-249)||(30203408-30203508)
chr8 (148-248)||(6108805-6108904)
chr8 (97-200)||(35878961-35879064)
chr8 (97-252)||(11007983-11008136)
chr8 (120-251)||(4810927-4811058)
chr8 (203-246)||(8768996-8769039)
chr8 (152-225)||(9210000-9210073)
chr8 (213-246)||(11257858-11257891)
[»] scaffold0004 (1 HSPs)
scaffold0004 (97-251)||(122419-122573)
[»] chr3 (29 HSPs)
chr3 (97-251)||(42791040-42791192)
chr3 (97-252)||(53287412-53287567)
chr3 (142-266)||(12789834-12789957)
chr3 (100-251)||(37700210-37700360)
chr3 (103-214)||(28392154-28392265)
chr3 (103-251)||(24657203-24657351)
chr3 (178-257)||(36771826-36771906)
chr3 (97-252)||(20379019-20379174)
chr3 (97-252)||(30732785-30732940)
chr3 (97-253)||(41519470-41519628)
chr3 (116-252)||(20796416-20796553)
chr3 (101-252)||(28554166-28554316)
chr3 (110-232)||(42760399-42760524)
chr3 (170-260)||(37311728-37311818)
chr3 (142-226)||(32733665-32733749)
chr3 (101-225)||(49447561-49447685)
chr3 (98-192)||(12931501-12931593)
chr3 (182-257)||(46750135-46750209)
chr3 (162-246)||(54465304-54465388)
chr3 (97-170)||(39990755-39990828)
chr3 (100-180)||(49230046-49230124)
chr3 (170-246)||(45054724-45054800)
chr3 (160-243)||(54362104-54362187)
chr3 (213-246)||(12568747-12568780)
chr3 (213-246)||(13545211-13545244)
chr3 (213-246)||(28451856-28451889)
chr3 (215-264)||(37238747-37238796)
chr3 (211-255)||(50129171-50129215)
chr3 (170-246)||(53684023-53684099)
[»] scaffold0047 (1 HSPs)
scaffold0047 (97-256)||(66143-66306)
[»] scaffold0006 (1 HSPs)
scaffold0006 (119-238)||(50593-50712)
[»] scaffold0050 (1 HSPs)
scaffold0050 (98-252)||(37198-37350)
[»] scaffold0005 (1 HSPs)
scaffold0005 (126-261)||(223678-223813)
[»] scaffold0329 (1 HSPs)
scaffold0329 (97-231)||(8194-8328)
[»] scaffold0250 (1 HSPs)
scaffold0250 (165-243)||(9039-9117)
[»] scaffold0027 (1 HSPs)
scaffold0027 (120-226)||(16852-16958)
[»] scaffold0339 (1 HSPs)
scaffold0339 (142-202)||(7184-7244)
[»] scaffold0154 (1 HSPs)
scaffold0154 (213-246)||(36471-36504)
[»] scaffold0007 (1 HSPs)
scaffold0007 (101-202)||(247611-247712)


Alignment Details
Target: chr4 (Bit Score: 273; Significance: 1e-152; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 111 - 415
Target Start/End: Original strand, 47388485 - 47388789
Alignment:
Q  111 aattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  47388485 aattataaaaatattttattgaaatgtgtgtattacatttaatctttaaccttttaatgaattgaatgtacaaaattttagagaatatttcttcttttgg 47388584  T
Q  211 gtttcttaacatgtgctctaagggcacaagttaacactacccataaaaaatttaaaaagttacataacattatttatttgtttattttatttgagaatgt 310  Q
     ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47388585 atttcttaacatgtgccctaagggcacaagttaacactacccttaaaaaatttaaaaagttacataacattatttatttgtttattttatttgagaatgt 47388684  T
Q  311 aaaagtgaaagatgagatatttgtgagttaacttactagtgaaaactctagttgaagggaaaattgagacaccatcacaaatatgagagggatatatatg 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47388685 aaaagtgaaagatgagatatttgtgagttaacttactagtgaaaactctagttgaagggaaaattgagacaccatcacaaatatgagagggatatatatg 47388784  T
Q  411 gatcc 415  Q
    |||||    
T  47388785 gatcc 47388789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 49250161 - 49250017
Alignment:
Q  108 atcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttt 207  Q
    ||||| |||||||||| |||||||||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||| ||||||    
T  49250161 atcaaatataaaaatagtttattgaaatgtctgtattacatttaatctttaactttttaatgaattgaatgcacaaaattttaatgaatatttattcttt 49250062  T
Q  208 tgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||| ||||||||||| ||| |||||||||||||||||||||||||    
T  49250061 tggatttcttaacatttgccctaagggcacaagttaacactaccc 49250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 100 - 252
Target Start/End: Original strand, 26740770 - 26740922
Alignment:
Q  100 gttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatatt 199  Q
    ||||||||||||| |||||||||||||||||| ||| || ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  26740770 gttaatgaatcaaatataaaaatattttattggaatatgtgtattacatgtaatctttaactttttaatgaattgaatgcacaaaattttagagaatatt 26740869  T
Q  200 ttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    | ||||||||  ||||||| |||||||  |||| |||||| ||||||||||||    
T  26740870 tcttcttttgaatttcttagcatgtgccttaagagcacaaattaacactaccc 26740922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 97 - 242
Target Start/End: Complemental strand, 55323074 - 55322929
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||| |||||||| |||| ||||| ||||||| ||| || | ||||||||||||||||||  ||||||||||||||||||||||||||||| | |||    
T  55323074 caagttagtgaatcaaatatagaaataatttattggaatttgtgcattacatttaatctttaactttttaatgaattgaatgcacaaaattttaaaaaat 55322975  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagtt 242  Q
    |||| |||||| |||||||||||||||||| |||||||||||||||    
T  55322974 atttcttctttggggtttcttaacatgtgccctaagggcacaagtt 55322929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 50328505 - 50328350
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||||||  |||| |||||   ||||| |||||| | ||||||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  50328505 caagttaatgaatcagatatagaaataggatattggaatgtgtgcattacatttaatctttaactttttaatgaattggatgcacaaaattttagagaat 50328406  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    |||| || ||| |||||||||||||||||| || ||||||||| ||||||||||||    
T  50328405 atttcttttttggggtttcttaacatgtgcccttagggcacaaattaacactaccc 50328350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 53133476 - 53133631
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||| ||| |||| |||||  | |||| ||| || | ||||||||||||||||||  ||||||||| |||||||| |||||||||| | |||    
T  53133476 caagttaatgaaacaaatatagaaataactcattggaatatgtgcattacatttaatctttaaatttttaatgagttgaatgcgcaaaattttataaaat 53133575  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  53133576 atttcttcttttaggtttcttaacatgtgccctaagggcacaagttaacactaccc 53133631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 46393216 - 46393312
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacccataaaa 258  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||| |||||    
T  46393216 ttttaatgaattgaatgcacacaattttagagaatatttattcttttggttttcttaacatgtgctctaaggacacaaattaacactacccttaaaa 46393312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 118 - 253
Target Start/End: Original strand, 17340346 - 17340481
Alignment:
Q  118 aaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttctt 217  Q
    |||||| ||||||| |||||| | ||||||||||||||||||  ||||||| |||||| |||| |||||||||||||||  |||||||||| | ||||||    
T  17340346 aaaatagtttattggaatgtgtgcattacatttaatctttaactttttaataaattgattgcataaaattttagagaatgctttttcttttagatttctt 17340445  T
Q  218 aacatgtgctctaagggcacaagttaacactaccca 253  Q
    ||||||||| ||||| || |||||||||||||||||    
T  17340446 aacatgtgccctaagagcccaagttaacactaccca 17340481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 31204442 - 31204313
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| |||||| |||| ||||  ||||||| || ||| ||||||||||||||||||||  ||||||| ||||||||||||| ||||| | |||||    
T  31204442 caagttaataaatcaaatatagaaatggtttattggaaggtgtgtattacatttaatctttaactttttaataaattgaatgcacacaatttaaaagaat 31204343  T
Q  197 attttttcttttgggtttcttaacatgtgc 226  Q
    ||| ||||||||||||||||||||||||||    
T  31204342 attatttcttttgggtttcttaacatgtgc 31204313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 225
Target Start/End: Original strand, 42674027 - 42674155
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||| ||| |||||||||| || |||| |||||  | |||| |||||||||||||| ||||||||| ||||||||||||||||||| | |||    
T  42674027 caagttaatgaaacaaatataaaaataattcattggaatgtatgcattatatttaatctttaattttttaatgagttgaatgcacaaaattttataaaat 42674126  T
Q  197 attttttcttttgggtttcttaacatgtg 225  Q
    |||| |||||||  |||||||||||||||    
T  42674127 atttcttcttttaagtttcttaacatgtg 42674155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 4442251 - 4442382
Alignment:
Q  119 aaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttctta 218  Q
    ||||| |||||||||||||| | ||| ||||||| ||||||  ||||| ||||||||||||| | ||||||||||||||||| ||||||| | |||||||    
T  4442251 aaatagtttattgaaatgtgtgcatttcatttaaactttaactttttagtgaattgaatgcaaataattttagagaatatttcttctttttgttttctta 4442350  T
Q  219 acatgtgctctaagggcacaagttaacactac 250  Q
    |||| ||   ||||||||||||||||||||||    
T  4442351 acatatgtcgtaagggcacaagttaacactac 4442382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 37056184 - 37056341
Alignment:
Q  97 caagttaatgaatcaattataa-aaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaa 195  Q
    |||||||||||||||| ||||| ||||| ||||||| || | | | |||| |||||||||||||  |||||||||||||||| ||||||| |||||||||    
T  37056184 caagttaatgaatcaaatataataaataatttattggaaagggtgcattaaatttaatctttaactttttaatgaattgaatacacaaaactttagagaa 37056283  T
Q  196 tattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccca 253  Q
    || || |||||||  |||| ||| ||||||| ||||||| | |||||| |||||||||    
T  37056284 taattcttcttttaagttttttatcatgtgcgctaagggtaaaagttagcactaccca 37056341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 97 - 225
Target Start/End: Complemental strand, 41236149 - 41236021
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| |||||| |||| ||||| |||||| ||||||| | ||||||||||||||||||  ||||||| |||| |||||||||||||||| | |||    
T  41236149 caagttaataaatcaaatatagaaataatttattaaaatgtgtgcattacatttaatctttaactttttaataaattaaatgcacaaaattttataaaat 41236050  T
Q  197 attttttcttttgggtttcttaacatgtg 225  Q
    |||| ||||||| | ||| ||||||||||    
T  41236049 atttcttcttttagattttttaacatgtg 41236021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 45220052 - 45219917
Alignment:
Q  119 aaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatatttt--ttcttttgggtttct 216  Q
    ||||||| ||||| |||| | |||||| |||||||||||||| ||||||||||||||||||||||| |||  |||||| ||||  ||  |||   |||||    
T  45220052 aaatattatattggaatgcgtgtattaaatttaatctttaatgttttaatgaattgaatgcacaaagtttatgagaatttttttatttatttttatttct 45219953  T
Q  217 taacatgtgctctaagggcacaagttaacactaccc 252  Q
    |||||||||| |||||||||||||||||||||||||    
T  45219952 taacatgtgccctaagggcacaagttaacactaccc 45219917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 45891303 - 45891425
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattt 200  Q
    ||||||| |||| |||| ||||| ||||||||| | || | ||||||||||||||||||  |||||||||||| | |||||||||||||||||||||| |    
T  45891303 ttaatgagtcaaatatagaaatagtttattgaagtttgtgcattacatttaatctttaactttttaatgaattaattgcacaaaattttagagaatatat 45891402  T
Q  201 tttcttttgggtttcttaacatg 223  Q
     |||||||  |||||||||||||    
T  45891403 cttcttttaagtttcttaacatg 45891425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 124 - 253
Target Start/End: Original strand, 34291270 - 34291399
Alignment:
Q  124 ttttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatg 223  Q
    |||||||| |||||||| ||| |||||||| |||||  ||||||| | || |||||| ||| |||| || ||| |||||| |||| ||||| | ||||||    
T  34291270 ttttattggaatgtgcgcattgcatttaatatttaaccttttaataatttaaatgcataaattttttgaaaatgtttttttttttaggtttttaaacatg 34291369  T
Q  224 tgctctaagggcacaagttaacactaccca 253  Q
    ||| ||||||||||||||||||||||||||    
T  34291370 tgccctaagggcacaagttaacactaccca 34291399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 45088290 - 45088201
Alignment:
Q  161 attttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactac 250  Q
    |||| |||||||| |||||| ||||||||||||||  ||||||||||||||||||||||||||| | |||| |||| |||||||||||||    
T  45088290 atttgaatgaattaaatgcataaaattttagagaaagttttttcttttgggtttcttaacatgttccctaaaggcataagttaacactac 45088201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 16067877 - 16067794
Alignment:
Q  125 tttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttctttt 208  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||| | ||| | |||||||||    
T  16067877 tttattgaaatgtgtgtattacatttaatctttaactttttaatgaattgaatacacaaaattttaaaaaatttcttttctttt 16067794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 34119033 - 34118904
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| |||| |||| |||  |||||||||||| || | ||| |||| ||| |||||  ||||||| | || |||||||||||||||| |||||    
T  34119033 caagttaatgattcaaatatagaaaatttttattgaaatatgtgcattgcattcaatatttaactttttaatcatttaaatgcacaaaattttatagaat 34118934  T
Q  197 attttttcttttgggtttcttaacatgtgc 226  Q
    ||||  |||||| |||||||||||||||||    
T  34118933 atttactcttttaggtttcttaacatgtgc 34118904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 8171079 - 8171177
Alignment:
Q  125 tttattgaaatgtgcgtattacatttaatcttt-aatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacat 222  Q
    |||||||||||||| | |||| ||||||||||| ||  ||||||| |||||||||||||||||||||  |||||||| |||||||| |||| |||||||    
T  8171079 tttattgaaatgtgtgcattatatttaatcttttaactttttaataaattgaatgcacaaaattttaatgaatatttcttcttttgagttttttaacat 8171177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 12800013 - 12799923
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||||||| | || |||||||||||||||||| | | ||| |||||||  |||||||||||||||| ||||||||| |||||||||||||||    
T  12800013 ttttaatcatttaaatgcacaaaattttagaaattgtttcttcttttaagtttcttaacatgtgccctaagggcataagttaacactaccc 12799923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 5807428 - 5807359
Alignment:
Q  155 tttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgt 224  Q
    |||||| |||||||||||| |||||||||||||||| | ||||||||||||||||  |||||||||||||    
T  5807428 tttaattttttaatgaattaaatgcacaaaattttaaaaaatattttttcttttgaatttcttaacatgt 5807359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 182
Target Start/End: Complemental strand, 31217037 - 31216952
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcaca 182  Q
    ||||||||| |||||| |||| ||||  ||||||| || ||| ||||||||||||||||||||  |||||||||||||||||||||    
T  31217037 caagttaataaatcaaatatagaaatggtttattggaaggtgtgtattacatttaatctttaactttttaatgaattgaatgcaca 31216952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 48622344 - 48622251
Alignment:
Q  130 tgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatg 223  Q
    ||||||||| | ||| |||| ||| |||||  ||||||| | || |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  48622344 tgaaatgtgtgcattgcattcaatatttaactttttaatcatttaaatgcacaaaattttagagaatatttcttcttttaggtttcttaacatg 48622251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 253
Target Start/End: Original strand, 31861104 - 31861216
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttc-ttttgggtttcttaacatgtgctctaagggcacaag 240  Q
    |||| |||||||||||||  ||| ||||| || |||||||||| ||| | ||||||||||||| ||||| ||||||||||||||||  | ||| ||||||    
T  31861104 attaaatttaatctttaacttttcaatgatttaaatgcacaaactttaaaagaatattttttctttttgagtttcttaacatgtgcctttaggacacaag 31861203  T
Q  241 ttaacactaccca 253  Q
    |||||| ||||||    
T  31861204 ttaacattaccca 31861216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 261
Target Start/End: Complemental strand, 14593700 - 14593565
Alignment:
Q  126 ttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtg 225  Q
    |||||| |||||| ||||| |||| ||| |||||  ||||||| |||| |||||| ||||||||| | ||||||| ||||||| | ||| |||| ||| |    
T  14593700 ttattgcaatgtgtgtattgcattaaatgtttaaatttttaatcaattaaatgcataaaattttaaaaaatatttcttcttttagattttttaatatggg 14593601  T
Q  226 ctctaagggcacaagttaacactacccataaaaaat 261  Q
    | |||| |||| |||||||||||||| || ||||||    
T  14593600 ccctaacggcataagttaacactacctatgaaaaat 14593565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 2554153 - 2554072
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    ||||||| |||||||||||||| || | ||| || |||| | |||||||||| |||||||||||| | ||||||||||||||    
T  2554153 ttttaattaattgaatgcacaacatgtaagaaaaaatttctacttttgggttgcttaacatgtgcccgaagggcacaagtta 2554072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 12798266 - 12798205
Alignment:
Q  163 tttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgt 224  Q
    |||||||||||||||| ||||||| ||||| ||||||| || |||| |||||||||||||||    
T  12798266 tttaatgaattgaatgtacaaaatcttagaaaatatttcttgttttaggtttcttaacatgt 12798205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 9319892 - 9319963
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaat 172  Q
    ||||| |||||| |||||||||| ||||||| |||||| | |||| |||||||||||||  |||||||||||    
T  9319892 ttaattaatcaaatataaaaataatttattgcaatgtgtgcattatatttaatctttaactttttaatgaat 9319963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 24453162 - 24453265
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| |||||| ||||  |||   |||||||||| || | |||| |||||||||||||  ||| ||||| ||||||||| ||||||| |||||||    
T  24453162 caagttaataaatcaaatatatgaatgagttattgaaatatgtgcattaaatttaatctttaacttttcaatgatttgaatgcataaaatttaagagaat 24453261  T
Q  197 attt 200  Q
    ||||    
T  24453262 attt 24453265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 21894791 - 21894869
Alignment:
Q  165 taatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    |||| ||| |||||||||||| || ||||||||||| | |  ||||||| ||||||||||||  |||||||||||||||    
T  21894791 taataaatagaatgcacaaaacttgagagaatatttctaccattgggttccttaacatgtgccgtaagggcacaagtta 21894869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 38354281 - 38354357
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaatt 173  Q
    |||||||||||||||| |||| ||||| |||||||||||||  | |||||| ||||| |||||  ||||||| ||||    
T  38354281 caagttaatgaatcaaatatagaaataatttattgaaatgtatgcattacaattaatgtttaactttttaataaatt 38354357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 47228832 - 47228772
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttt 202  Q
    |||| ||||||| |||||| |||| |||||||| ||||||||||||||||| ||| |||||    
T  47228832 attaaatttaatgtttaatgtttttatgaattggatgcacaaaattttagaaaatgttttt 47228772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 152
Target Start/End: Original strand, 966700 - 966755
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaa 152  Q
    |||||||||||||||| |||| ||||| ||||||||||||||   |||||||||||    
T  966700 caagttaatgaatcaaatatagaaatagtttattgaaatgtgtacattacatttaa 966755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 29508787 - 29508834
Alignment:
Q  205 ttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||||||||| |||||||||||| || ||||||||||||||||| ||||    
T  29508787 ttttgggttccttaacatgtgcccttagggcacaagttaacacgaccc 29508834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 22019516 - 22019562
Alignment:
Q  209 gggtttcttaacatgtgctctaagggcacaagttaacactacccata 255  Q
    |||||||||||||||||| || ||||||||||||||||  |||||||    
T  22019516 gggtttcttaacatgtgcccttagggcacaagttaacatgacccata 22019562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 246
Target Start/End: Complemental strand, 41460565 - 41460535
Alignment:
Q  216 ttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||||||||||||||||||||||||||||    
T  41460565 ttaacatgtgctctaagggcacaagttaaca 41460535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 22409468 - 22409501
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||||||||||| |||||||||||||||||||    
T  22409468 ttcttaacatgtgccctaagggcacaagttaaca 22409501  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 33176496 - 33176589
Alignment:
Q  115 ataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttctttt 208  Q
    ||||||||| ||||||  ||| || | |||||||||||| |||||  ||| ||| |||| ||| |||||||||||| | ||||||| |||||||    
T  33176496 ataaaaatagtttattagaatatgtgcattacatttaatatttaacttttaaataaatttaatacacaaaattttaaaaaatatttattctttt 33176589  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 50297675 - 50297634
Alignment:
Q  205 ttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||| |||| |||||||||||| |||||||||||||||||||    
T  50297675 tttttggttgcttaacatgtgccctaagggcacaagttaaca 50297634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 19904531 - 19904452
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagtt 242  Q
    ||||||| ||||||||||||||||||| | | | | |||||| | || |||| |||||||||||| ||||||| |||||||    
T  19904531 ttttaattaattgaatgcacaaaatttaata-atttttttttatatttggttgcttaacatgtgccctaagggtacaagtt 19904452  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 28675718 - 28675682
Alignment:
Q  210 ggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||| |||||||||||| |||||||||||||||||||    
T  28675718 ggttgcttaacatgtgccctaagggcacaagttaaca 28675682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 45891908 - 45891948
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaacactaccca 253  Q
    |||||||| ||||| || |||||||||||||||||||||||    
T  45891908 ttcttaacttgtgcccttagggcacaagttaacactaccca 45891948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 44966155 - 44966000
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| |||| |||| || || ||||||| |||||| | ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  44966155 caagttaatgattcaaatatagaattaatttattggaatgtgtgcattgcatttaatctttaactttttaatgaattgaatgcacaaaattttagagaat 44966056  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  44966055 atttcttcttttgggtttcttaacatgtgccctaagagcacaagttaacactaccc 44966000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 97 - 249
Target Start/End: Complemental strand, 40711304 - 40711152
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||| |||| |||| |||||||||  |||||||||||||| |||||  ||||||| |||||  |||||||||||| |||||||||||||||| | |||    
T  40711304 caagttcatgattcaaatataaaaattatttattgaaatgtgtgtattgtatttaatttttaactttttaatgaattaaatgcacaaaattttatacaat 40711205  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacacta 249  Q
    |||| |||||||| |||||||||||||||| | ||  ||||| ||||||||||    
T  40711204 atttcttcttttgtgtttcttaacatgtgcccaaaaagcacatgttaacacta 40711152  T

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Target: chr2; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 41542825 - 41542733
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacccat 254  Q
    ||||||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  41542825 ttttaatcaattaaatgcacaaaattttagagaatatttcttcttttgagtttcttaacatgtgccttaagggcacaagttaacactacccat 41542733  T

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Target: chr2; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 31663529 - 31663375
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| || ||| |||| ||||| ||||||| |||||| | |||| ||||||| |||||  ||| |||||||||||||||||| |||||| |||||    
T  31663529 caagttaattaaacaaatatataaatagtttattggaatgtgtgcattatatttaat-tttaacttttgaatgaattgaatgcacaatattttaaagaat 31663431  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||||||||||||   ||||||||||||||  || | ||||||||||||||||||||    
T  31663430 attttttcttttaaatttcttaacatgtgtccttaaggcacaagttaacactaccc 31663375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 252
Target Start/End: Complemental strand, 44022266 - 44022139
Alignment:
Q  125 tttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgt 224  Q
    |||||||||||| | |  ||||||||||| |||||  ||||||| |||||||||||||||||||||| |||||||  ||||||| ||||||||| |||||    
T  44022266 tttattgaaatgcgtgccttacatttaatttttaactttttaattaattgaatgcacaaaattttagggaatattacttcttttaggtttcttatcatgt 44022167  T
Q  225 gctctaagggcacaagttaacactaccc 252  Q
    ||  ||||||||||| |||||| |||||    
T  44022166 gccataagggcacaaattaacattaccc 44022139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 142 - 252
Target Start/End: Complemental strand, 34929282 - 34929172
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||| ||  ||||||  || || ||| ||||||||||||||| ||||||||| ||||    
T  34929282 attaaatttaatctttaatgttttaatgaattgaatgcacaaagtttaaggaaatattcctttttctggatttcttaacatgtgccctaagggcataagt 34929183  T
Q  242 taacactaccc 252  Q
    |||||||||||    
T  34929182 taacactaccc 34929172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 6461331 - 6461219
Alignment:
Q  140 gtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaa 239  Q
    |||| |||||||||||||||  ||||||||||||||||| | |||||||| |||||||||| |||||||| |||| ||||||||||  ||||  | ||||    
T  6461331 gtatcacatttaatctttaactttttaatgaattgaatgtataaaattttggagaatatttcttcttttgagttttttaacatgtgtcctaaaagtacaa 6461232  T
Q  240 gttaacactaccc 252  Q
    |||||||||||||    
T  6461231 gttaacactaccc 6461219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 2080587 - 2080516
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || || ||||||||    
T  2080587 aattgaatgcacaaaatttaagagaatatttttgcttttgggtttcttaacatgtgcccttagcgcacaagt 2080516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 25220749 - 25220886
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| | | || |||| ||||| ||||||||||| || ||||| | ||||||||||||| ||||||| |||| ||| || ||||||||||| |||    
T  25220749 caagttaattatttaaatatagaaataatttattgaaatttgtgtattgcttttaatctttaattttttaatcaattaaattcataaaattttagaaaat 25220848  T
Q  197 attttttcttttgggtttcttaacatgtgctctaaggg 234  Q
     ||| ||||||||  ||| ||||||||||| |||||||    
T  25220849 gtttcttcttttgaattttttaacatgtgccctaaggg 25220886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 98 - 226
Target Start/End: Complemental strand, 27269230 - 27269100
Alignment:
Q  98 aagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttaga--gaa 195  Q
    ||||||||||||||||  || ||||| |||||||||||||| | ||| ||||||| ||||||  ||||||||||||  |||||||||||||||||         
T  27269230 aagttaatgaatcaatggtataaataatttattgaaatgtgtgcatttcatttaacctttaactttttaatgaattagatgcacaaaattttagaatttt 27269131  T
Q  196 tattttttcttttgggtttcttaacatgtgc 226  Q
    | |||||| ||||||||||||||| ||||||    
T  27269130 tttttttttttttgggtttcttaatatgtgc 27269100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 25396896 - 25397009
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    |||| |||||||||||||| ||||||||||||||||| ||||| ||| ||| ||| ||| || |||||| ||| ||||||||||   ||| |||| | ||    
T  25396896 attaaatttaatctttaatgttttaatgaattgaatgtacaaagtttaagaaaatctttctttttttggattttttaacatgtgtcttaaaggcataggt 25396995  T
Q  242 taacactacccata 255  Q
    ||||||||||||||    
T  25396996 taacactacccata 25397009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 33025226 - 33025309
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtg 225  Q
    |||| |||||||||||||| |||| |||||||||||||||||| ||| || ||||||||  | |||||| ||||||||||||||    
T  33025226 attaaatttaatctttaatgttttgatgaattgaatgcacaaagtttaagggaatatttcattttttggatttcttaacatgtg 33025309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 12972772 - 12972694
Alignment:
Q  165 taatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    |||| ||||||||||||||||||| |||||||| || | ||||||| || |||||||||||| ||||| ||||||||||    
T  12972772 taataaattgaatgcacaaaatttcagagaataattctacttttggattgcttaacatgtgccctaagagcacaagtta 12972694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 31742807 - 31742702
Alignment:
Q  119 aaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttctta 218  Q
    ||||| ||||||| ||| |  |||||| ||||||| |||||  ||| ||||||||||||| ||||||||| | | ||||||||||||||||  |||||||    
T  31742807 aaatagtttattggaatatatgtattatatttaatgtttaacttttgaatgaattgaatgtacaaaatttcaaaaaatattttttcttttgaatttctta 31742708  T
Q  219 acatgt 224  Q
    ||||||    
T  31742707 acatgt 31742702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 17696107 - 17696021
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactac 250  Q
    ||||||||||||||||||||||| ||| || |||||||| || |||||| ||||||||||||||| || |  |||||||||||||||||    
T  17696107 ttttaatgaattgaatgcacaaagtttaagggaatatttctt-ttttggatttcttaacatgtgc-cttaaagcacaagttaacactac 17696021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 20203615 - 20203714
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    |||| |||||||||||||| |||||||||||||||| || ||| ||| | | ||||||| || |||||| |||||||||| |||  ||||| ||||||||    
T  20203615 attaaatttaatctttaatgttttaatgaattgaatacagaaagtttaaaataatatttctttttttggatttcttaacacgtgtcctaagagcacaagt 20203714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 32644894 - 32644835
Alignment:
Q  149 ttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttctttt 208  Q
    |||||||||||| ||||||||||||||||||| ||||||| || ||||||||||| ||||    
T  32644894 ttaatctttaatgttttaatgaattgaatgcagaaaatttaagggaatattttttttttt 32644835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 226
Target Start/End: Original strand, 14839619 - 14839747
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| | |||| |||||||||| | |||| || | || | |||| ||||||| |||||| ||| ||||||||||||| | ||||||| | |  ||    
T  14839619 caagttaataactcaaatataaaaataatgtattaaattatgtgaattaaatttaatttttaatgttt-aatgaattgaatgtataaaatttaaaaatat 14839717  T
Q  197 attttttcttttgggtttcttaacatgtgc 226  Q
    |||||||||||| | |||||||||||||||    
T  14839718 attttttcttttagatttcttaacatgtgc 14839747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 34504254 - 34504315
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatg 223  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||  || |||||||||    
T  34504254 ttttaattaattgaatgcacaaaatttaagagaatatttttacttttgaattgcttaacatg 34504315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 41464142 - 41464086
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgc 226  Q
    ||||||||||||||||||  ||||||||||||| ||||||| ||| |||||||||||    
T  41464142 aattgaatgcacaaaattcaagagaatatttttacttttggatttattaacatgtgc 41464086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 8996659 - 8996541
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaa-tatt 199  Q
    |||||||| ||| |||| ||||| || ||| ||||||| | ||| |||||||| ||||   ||||||||| ||||||||||||||||||| | || ||||    
T  8996659 ttaatgaaacaaatatagaaatagttcattaaaatgtgtgcattccatttaatgtttagctttttaatgagttgaatgcacaaaattttataaaattatt 8996560  T
Q  200 ttttcttttgggtttctta 218  Q
    | ||||||| |||| ||||    
T  8996559 tcttcttttaggttgctta 8996541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 16721593 - 16721677
Alignment:
Q  124 ttttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttctttt 208  Q
    |||||||| ||||||   |||| ||||||| |||||  || |||| |||| |||||||||||||| ||||||||||||| |||||    
T  16721593 ttttattggaatgtgttgattaaatttaatttttaagtttgtaataaattaaatgcacaaaatttgagagaatatttttactttt 16721677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 246
Target Start/End: Complemental strand, 44721381 - 44721350
Alignment:
Q  215 cttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||||||||||||||||||||||||||||    
T  44721381 cttaacatgtgctctaagggcacaagttaaca 44721350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 1705089 - 1705131
Alignment:
Q  205 ttttgggtttcttaacatgtgctctaagggcacaagttaacac 247  Q
    |||| |||| |||||||||||| ||||||||||||||||||||    
T  1705089 ttttaggttgcttaacatgtgccctaagggcacaagttaacac 1705131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 30545560 - 30545631
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    |||| |||||||| ||||| ||| |||||||   ||||| ||||||||||||||||| ||||||||| ||||||    
T  30545560 aattaaatgcacacaatttgagaaaatattta--cttttaggtttcttaacatgtgccctaagggcataagtta 30545631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 252
Target Start/End: Original strand, 34242588 - 34242696
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    |||||||||||||||||| ||||||||||||  |||||| ||||   |||| ||||||| |||||||   ||||||||  |||| |||||   |||||||    
T  34242588 attacatttaatctttaacattttaatgaataaaatgca-aaaaaaatagaaaatatttcttctttt-aatttcttaatgtgtgttctaaaaacacaagt 34242685  T
Q  242 taacactaccc 252  Q
    |||||||||||    
T  34242686 taacactaccc 34242696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 14776308 - 14776275
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||||||||||||||| ||||||||||||||    
T  14776308 ttcttaacatgtgctctaatggcacaagttaaca 14776275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 32656280 - 32656247
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||||||||||| |||||||||||||||||||    
T  32656280 ttcttaacatgtgccctaagggcacaagttaaca 32656247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 34373516 - 34373593
Alignment:
Q  147 atttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgt 224  Q
    ||||||| |||||  || |||| |||||||| ||||| |||| ||||||||||||| | |||  ||||||||||||||    
T  34373516 atttaatttttaaatttgtaataaattgaatacacaatatttgagagaatatttttacctttaagtttcttaacatgt 34373593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 6e-47; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 33755562 - 33755407
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||| |||||||||||||| ||| |||||||||||||||  |||||||||||||| |||||| ||||||| |||||||||  ||||||||||| ||||    
T  33755562 caagtttatgaatcaattatagaaacattttattgaaatgtttgtattacatttaatttttaattttttaataaattgaatgggcaaaattttagggaat 33755463  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    || | ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  33755462 atgtcttcttttgggtttcttaacatatgctctaatggcacaagttaacactaccc 33755407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 2616999 - 2617155
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||||||| |||||||||| |||||||  ||||  | ||||||||||| ||||||  |||||||| |||||||||| |||||||||||||||    
T  2616999 caagttaatgaatcaaatataaaaatagtttattgggatgtatgcattacatttaacctttaacgttttaatgtattgaatgcataaaattttagagaat 2617098  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccca 253  Q
    |||| ||||||| | ||| |||||||||||  ||||| |||||||||||||||||||    
T  2617099 atttattcttttagattttttaacatgtgccataaggacacaagttaacactaccca 2617155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 24548114 - 24547962
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||| |||||||||| ||||||  || ||||||||||  || | ||||||||||||||||||  ||||||||||||||||||||| |||||||||||||    
T  24548114 caagtgaatgaatcaaatataaa--tagtttattgaaaaatgtgcattacatttaatctttaactttttaatgaattgaatgcacataattttagagaat 24548017  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacc 251  Q
    ||||||||||||  |||||||||||||| |  |||  ||||||||||||||||||    
T  24548016 attttttcttttatgtttcttaacatgtaccttaaaagcacaagttaacactacc 24547962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 13243775 - 13243911
Alignment:
Q  116 taaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttc 215  Q
    |||||||| | ||||| |||||| | |||| ||||||| |||||| ||||||||||||||||| ||||| ||| ||| ||||||| || |||||| ||||    
T  13243775 taaaaataatgtattggaatgtgtgcattaaatttaatttttaatgttttaatgaattgaatgtacaaagtttaagaaaatatttctttttttggatttc 13243874  T
Q  216 ttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  13243875 ttaacatgtgccctaagggcacaagttaatactaccc 13243911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 2359663 - 2359813
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattt 200  Q
    ||||||| |||| |||| ||||| |||||||||| ||| | ||||||||||||| ||||  ||||| | |||| || |||||||||| || |||||||||    
T  2359663 ttaatgattcaagtatagaaataatttattgaaaagtgtgcattacatttaatcgttaactttttattcaattaaaagcacaaaattctaaagaatattt 2359762  T
Q  201 tttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacc 251  Q
    |||||||| | ||| |||||||||||||||||  |||||||||||||||||    
T  2359763 tttcttttagattttttaacatgtgctctaagaacacaagttaacactacc 2359813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 124 - 254
Target Start/End: Original strand, 4844440 - 4844570
Alignment:
Q  124 ttttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatg 223  Q
    |||||||| |||||| |||||| ||||||| |||||  ||||||| ||||||||||||||||||||| | ||||||| ||||||| |||||||||||||     
T  4844440 ttttattggaatgtgtgtattatatttaatatttaactttttaataaattgaatgcacaaaattttaaaaaatatttcttcttttaggtttcttaacata 4844539  T
Q  224 tgctctaagggcacaagttaacactacccat 254  Q
    |||  ||||||||||| ||||| ||||||||    
T  4844540 tgccataagggcacaaattaacgctacccat 4844570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 2557405 - 2557258
Alignment:
Q  98 aagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaata 197  Q
    ||||||||||||||| |||||||||| ||||||  |||||| |||||| |||||||||||||  | ||| |||  ||||||||| || |||||||||| |    
T  2557405 aagttaatgaatcaaatataaaaatactttattagaatgtgtgtattatatttaatctttaacttcttagtgatgtgaatgcac-aacttttagagaaca 2557307  T
Q  198 ttttttcttttgggtttcttaaca--tgtgctctaagggcacaagttaa 244  Q
    ||| || |||||||||||||||||  |||||||||||||||||||||||    
T  2557306 tttatttttttgggtttcttaacatgtgtgctctaagggcacaagttaa 2557258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 9429698 - 9429545
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| | || |||  ||||| || ||||||||||| | ||| ||||||||||||||| ||||||| |||| |||||| ||||||||||| |||    
T  9429698 caagttaatgatttaaatatggaaataattcattgaaatgtgtgcattgcatttaatctttaattttttaatcaattaaatgcataaaattttagaaaat 9429599  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactac 250  Q
    |||| |||||| ||| ||||||| ||||||  ||| ||||||||||||||||||    
T  9429598 atttcttctttcgggcttcttaatatgtgccttaaaggcacaagttaacactac 9429545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 249
Target Start/End: Complemental strand, 17515457 - 17515309
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattt 200  Q
    ||||||| |||| |||  ||||| ||||||||||| || ||||| ||||||||||||||  ||||||| |||| |||| |||||||||||||||||||||    
T  17515457 ttaatgattcaaatatgtaaataatttattgaaatatgtgtattgcatttaatctttaactttttaatcaattaaatgtacaaaattttagagaatattt 17515358  T
Q  201 tttcttttgggtttcttaacatgtgctctaagggcacaagttaacacta 249  Q
     ||||||| ||||||||||||  ||  ||| || |||||||||||||||    
T  17515357 cttcttttaggtttcttaacaaatgtcctagggacacaagttaacacta 17515309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 142 - 252
Target Start/End: Complemental strand, 3159680 - 3159570
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| || ||||   ||||||||||||||| ||||||||||||||    
T  3159680 attaaatttaatctttaatgttttaatgaattgaatgcacaaagtttaagagaatatttctttttttaaatttcttaacatgtgccctaagggcacaagt 3159581  T
Q  242 taacactaccc 252  Q
    || ||| ||||    
T  3159580 tagcaccaccc 3159570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 253
Target Start/End: Original strand, 9318780 - 9318880
Alignment:
Q  155 tttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaaggg--cacaagttaacactaccc 252  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||  ||||||||| ||||||||    
T  9318780 tttaatttttgaataaattgaatgcacaaaattttagagaatatttcttcttttgaatttcttaacatgtgccctaagggcacacaagttagcactaccc 9318879  T
Q  253 a 253  Q
    |    
T  9318880 a 9318880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 119 - 251
Target Start/End: Original strand, 3337656 - 3337787
Alignment:
Q  119 aaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttctta 218  Q
    ||||| ||||||| |||||| | ||| ||||||||| ||||  ||||||| |||| |||||| |||||||||||||||| || |||||||   |||||||    
T  3337656 aaataatttattggaatgtgtgcattgcatttaatcgttaactttttaatcaattaaatgcataaaattttagagaataattcttcttttaaatttctta 3337755  T
Q  219 acatgtgctctaagggcacaagttaacactacc 251  Q
    |||||||| ||||| ||||||||||||||||||    
T  3337756 acatgtgc-ctaagcgcacaagttaacactacc 3337787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 11842361 - 11842268
Alignment:
Q  133 aatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgc 226  Q
    |||||| | ||| |||||||||| |||  ||| | ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  11842361 aatgtgtgcattgcatttaatctgtaacttttcagtgaattgaatgcacaaaattttagagaatatttcttcttttggatttcttaacatgtgc 11842268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 30323170 - 30323079
Alignment:
Q  100 gttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttag 191  Q
    ||||||| ||||| |||| ||||| ||||||| |||||  ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  30323170 gttaatgcatcaaatatagaaatagtttattggaatgtatgtattacatttaatctttaactttttaatgaattgaatgcactaaattttag 30323079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 13657119 - 13656991
Alignment:
Q  127 tattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttt-tgggtttcttaacatgtg 225  Q
    ||||| |||||| |||||| | |||||||||||| |||||||||||| |||| ||||| ||| |  |||||||| || ||| |   ||||||||| ||||    
T  13657119 tattggaatgtgtgtattagacttaatctttaatgttttaatgaattaaatgtacaaagtttaaacgaatatttcttttttctttatttcttaacttgtg 13657020  T
Q  226 ctctaagggcacaagttaacactacccat 254  Q
    | |||||||||||||||||||||| ||||    
T  13657019 ccctaagggcacaagttaacactaaccat 13656991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 7509715 - 7509642
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    ||||||||||||||||||| |||  || ||| | ||||||||||||||||||||||| || |||||||||||||    
T  7509715 aattgaatgcacaaaatttaagaacatgtttctacttttgggtttcttaacatgtgcccttagggcacaagtta 7509642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 2615115 - 2615220
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||||||| |||||||||| || |||  |||||| | |||| ||||||| ||||   ||||| | ||||||| |||||||||| |||| ||     
T  2615115 caagttaatgaatcaaatataaaaatagttcattagaatgtgtgcattatatttaatttttatgcttttactaaattgaaagcacaaaattctagaaaac 2615214  T
Q  197 attttt 202  Q
    ||||||    
T  2615215 attttt 2615220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 9456205 - 9456166
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  9456205 ttcttaacttgtgctcttagggcacaagttaacactaccc 9456166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 31948874 - 31948826
Alignment:
Q  200 ttttcttttgggtttcttaacatgtgctctaagggcacaagttaacact 248  Q
    |||||||||| |||||||||||| ||  ||||||||| |||||||||||    
T  31948874 ttttcttttgagtttcttaacatatgtcctaagggcataagttaacact 31948826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 6e-47; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 97 - 257
Target Start/End: Original strand, 19961549 - 19961711
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||||||||   || ||||| ||||||| |||||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  19961549 caagttaatgaatcaaaagtagaaatagtttattggaatgtgtgtatttcatttaatctttaattttttaataaattgaatgcacaaaattttaaagaat 19961648  T
Q  197 attttttcttttgggtttcttaac--atgtgctctaagggcacaagttaacactacccataaa 257  Q
    |||| ||||||||| |||||||||  |||||| ||||||||||||||||||||||||||||||    
T  19961649 atttcttcttttggatttcttaacatatgtgccctaagggcacaagttaacactacccataaa 19961711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 36527422 - 36527577
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||| ||||| |||| ||||| ||||||| | |||| | ||| ||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  36527422 caagttaatgtatcaaatatagaaatagtttattggagtgtgtgcattgcatttaatctttaac-ttttaataaattgaatgcacaaaattttagagaat 36527520  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccca 253  Q
    |||| ||||||||| ||||||||||||||   |||||||||||||||||||||||||    
T  36527521 atttattcttttggatttcttaacatgtgtcttaagggcacaagttaacactaccca 36527577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 249
Target Start/End: Complemental strand, 40298388 - 40298236
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| | | || |||||||||| ||||||  ||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  40298388 caagttaataagttaaatataaaaataatttattagaatgtgtacattacatttaatctttaacattttaatgaattgaatgcacaaaattttagaaaat 40298289  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacacta 249  Q
    |||| |||||||   |||||||||||||| |||||||||||||||||||||||    
T  40298288 atttattcttttaaatttcttaacatgtgttctaagggcacaagttaacacta 40298236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 249
Target Start/End: Complemental strand, 1860289 - 1860136
Alignment:
Q  97 caagttaatgaatcaa-ttataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattg-aatgcacaaaattttagaga 194  Q
    |||||||||| ||||| ||||||||||| |||||||||||||| | |||||||||||||| | || ||||||| ||||  ||||||||||||||||||||    
T  1860289 caagttaatgcatcaaattataaaaataatttattgaaatgtgtgcattacatttaatctctcattttttaatcaattttaatgcacaaaattttagaga 1860190  T
Q  195 atattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacacta 249  Q
    |||||||||||||| | ||||||||||| |||  |||| ||||||||||||||||    
T  1860189 atattttttctttt-gatttcttaacatatgccttaagagcacaagttaacacta 1860136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 98 - 252
Target Start/End: Original strand, 25983059 - 25983213
Alignment:
Q  98 aagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaata 197  Q
    |||||||||| | || |||| ||||| ||||||| ||| || | ||| ||||||||||||||  ||| ||  ||||||||||||||||||||||||||||    
T  25983059 aagttaatgatttaaatatagaaataatttattggaatatgtgcattgcatttaatctttaacttttcaaaaaattgaatgcacaaaattttagagaata 25983158  T
Q  198 ttttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||| ||||||| ||||||||||||||||  ||||| |||||||||||||||||||    
T  25983159 tttattcttttaggtttcttaacatgtgtcctaagagcacaagttaacactaccc 25983213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 14576040 - 14575911
Alignment:
Q  114 tataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtt 213  Q
    |||| ||||| ||||| |||||||| | |||||||| ||| |||||  ||||||||||||||||||||||||||||||  |||||||||||||||| |||    
T  14576040 tatagaaatagtttatcgaaatgtgtgcattacattgaatatttaactttttaatgaattgaatgcacaaaattttagtaaatattttttcttttgagtt 14575941  T
Q  214 tcttaacatgtgctctaagggcacaagtta 243  Q
    ||||||||||| |  |||||||||||||||    
T  14575940 tcttaacatgttccgtaagggcacaagtta 14575911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 15591787 - 15591634
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||||||| |||| ||||| ||| |||| ||||  | ||| | ||||||||||||| ||||||||||||||||||||||||||||||||||     
T  15591787 caagttaatgaatcaaatatagaaatagtttgttgagatgtatgcattccttttaatctttaattttttaatgaattgaatgcacaaaattttagagaaa 15591688  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactac 250  Q
    ||  ||||||||  |||| ||||||| |||  | | ||||||||||||||||||    
T  15591687 ataatttcttttaagttttttaacatttgcctttaaggcacaagttaacactac 15591634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 128 - 247
Target Start/End: Original strand, 1352809 - 1352928
Alignment:
Q  128 attgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgct 227  Q
    |||||||||||  | ||| |||||||||||||  |||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||      
T  1352809 attgaaatgtgtatgttaaatttaatctttaactttttaatgaattgaatgcacaatatttaagagaatattttttctttttgatttcttaacatgtgtc 1352908  T
Q  228 ctaagggcacaagttaacac 247  Q
     |||| ||||||||||||||    
T  1352909 ataagagcacaagttaacac 1352928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 102 - 253
Target Start/End: Original strand, 30685577 - 30685728
Alignment:
Q  102 taatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatatttt 201  Q
    ||||||| ||| |||| ||||| ||||||||||| || | |||||||||||| |||| | ||||||||||||||||||||||||||||| | |||||||     
T  30685577 taatgaaacaaatatagaaatagtttattgaaatatgtgcattacatttaatttttagttttttaatgaattgaatgcacaaaattttataaaatatttc 30685676  T
Q  202 ttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccca 253  Q
    |||||||   ||||||||||||   ||||||| || || |||||||||||||    
T  30685677 ttcttttaaatttcttaacatgaaatctaaggacataacttaacactaccca 30685728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 100 - 249
Target Start/End: Original strand, 4746048 - 4746197
Alignment:
Q  100 gttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatatt 199  Q
    ||||||||||||| |||| ||||| ||||||| |||||   ||||  ||||| |||||||  ||||||||||||||||| |||| |||||| ||||||||    
T  4746048 gttaatgaatcaaatatagaaataatttattggaatgtatttattttatttattctttaactttttaatgaattgaatgtacaagattttatagaatatt 4746147  T
Q  200 ttttcttttgggtttcttaacatgtgctctaagggcacaagttaacacta 249  Q
    | || ||||| |||| |||||||||| |  ||||| ||||||||||||||    
T  4746148 tctttttttgagtttattaacatgtgtttcaagggtacaagttaacacta 4746197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 7406305 - 7406197
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    |||||||||||||||||   ||||||||| ||||||||| ||||||||| | ||||||| |||||||  |||||||||||||||  |||||||||||| |    
T  7406305 attacatttaatctttagctttttaatgagttgaatgcataaaattttataaaatatttcttcttttatgtttcttaacatgtgtcctaagggcacaaat 7406206  T
Q  242 taacactac 250  Q
    |||||||||    
T  7406205 taacactac 7406197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 28574896 - 28574793
Alignment:
Q  149 ttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacact 248  Q
    ||||| |||||| |||||||||||| |||||||||| ||| ||| ||||||| || |||||| ||| ||||||||||| |||||| ||||||||||||||    
T  28574896 ttaatatttaatgttttaatgaattaaatgcacaaagtttaagaaaatatttctttttttggattttttaacatgtgccctaaggacacaagttaacact 28574797  T
Q  249 accc 252  Q
    ||||    
T  28574796 accc 28574793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 102 - 190
Target Start/End: Original strand, 30721399 - 30721487
Alignment:
Q  102 taatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaatttta 190  Q
    ||||||| ||| |||| ||||| |||||||||||||| | |||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  30721399 taatgaaacaaatatagaaatagtttattgaaatgtgtgcattacatttaatttttaattttttaatgagttgaatgcacaaaatttta 30721487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 33208415 - 33208515
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||||||| |||| ||||| |||||||||||||  |||||| ||||||| |||||  ||||||||||| ||||||||||||||| | |||||    
T  33208415 caagttaatgaatcaaatatagaaataatttattgaaatgtatgtattaaatttaatatttaactttttaatgaatggaatgcacaaaatttaatagaat 33208514  T
Q  197 a 197  Q
    |    
T  33208515 a 33208515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 8234022 - 8234146
Alignment:
Q  119 aaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttctta 218  Q
    ||||| ||||||| | |||| | |||| |||||||||||||  |||  |||| || |||||||||||||| ||||||||||| |||||||| ||||||||    
T  8234022 aaataatttattggattgtgtgcattaaatttaatctttaacttttcgatgatttaaatgcacaaaatttaagagaatatttcttcttttgagtttctta 8234121  T
Q  219 acatgtgctctaagggcacaagttaa 244  Q
    |||||| | || ||||||||||||||    
T  8234122 acatgtac-cttagggcacaagttaa 8234146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 14622582 - 14622424
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| |||| |||| ||||| ||||||| || ||| | ||| |||| ||| |||||  || |||| ||||| ||| ||||||||||||| |||    
T  14622582 caagttaatgattcaaatatagaaataatttattggaaggtgtgcatttcattcaatatttaactttctaataaattggatgaacaaaattttagaaaat 14622483  T
Q  197 attttttcttttgggtttcttaacatgtgc--tctaagggcacaagttaacactacccat 254  Q
    |||||||||||| |||| ||||||||||||  | ||| | ||||||||||| ||||||||    
T  14622482 attttttctttt-ggttccttaacatgtgccttataatgacacaagttaaccctacccat 14622424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 226
Target Start/End: Original strand, 1355773 - 1355903
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||| || || |||| ||| | || |||||||| ||  ||||| ||||||||||||| |||||||| |||| |||||| ||||||| |||||||    
T  1355773 caagttaatggattaaatatagaaacagttaattgaaatatgtatattaaatttaatctttaacattttaataaatttaatgcataaaatttaagagaat 1355872  T
Q  197 a-ttttttcttttgggtttcttaacatgtgc 226  Q
    | |||||| ||||| |||| |||||||||||    
T  1355873 attttttttttttgagttttttaacatgtgc 1355903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 3938402 - 3938516
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| | || |||| ||||| ||||||| |||||  | ||| |||||||| | |||| ||||||||||||||||||| ||||||||| | |||    
T  3938402 caagttaatgatttaaatatagaaataatttattggaatgtatgcattgcatttaatatctaattttttaatgaattgaatgcataaaattttaaaaaat 3938501  T
Q  197 attttttcttttggg 211  Q
    |||| ||||||||||    
T  3938502 atttcttcttttggg 3938516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 42179863 - 42179787
Alignment:
Q  149 ttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgc 226  Q
    |||||||||||  ||||||| |||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  42179863 ttaatctttaactttttaattaattaaatgcataaaattt-agagaatattttttcttttaggtttcttaacatgtgc 42179787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 29429686 - 29429770
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||| |||| |||||||||||||| ||| |  |||| | |||||||||| |||||||||||| |||||||||||||||||||    
T  29429686 ttttaattaattaaatgcacaaaatttaagaaacaatttctacttttgggttgcttaacatgtgccctaagggcacaagttaaca 29429770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 101 - 252
Target Start/End: Complemental strand, 13951224 - 13951073
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattt 200  Q
    ||||||| |||| |||||||||| ||||||| ||  || | ||| | ||||||||||||  ||||||| |||| |||||||||||||| ||  |||||||    
T  13951224 ttaatgattcaaatataaaaataatttattggaaaatgtgcattgcgtttaatctttaactttttaatcaattaaatgcacaaaatttaaggaaatattt 13951125  T
Q  201 tttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
     || ||||  || ||||||||| ||| ||||||| | || ||||||||||||    
T  13951124 ctttttttaagtgtcttaacatctgccctaagggtataaattaacactaccc 13951073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 99 - 251
Target Start/End: Original strand, 42011257 - 42011404
Alignment:
Q  99 agttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatat 198  Q
    |||||||||||||| | || ||||||||||||| |||   |   ||||||| ||| |||||  ||||| |||||| |||||||||||||||| ||||||     
T  42011257 agttaatgaatcaaatgtagaaatattttattggaat---ccatttacattaaatttttaactttttagtgaattaaatgcacaaaattttatagaatac 42011353  T
Q  199 tttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacc 251  Q
    || ||||||||| ||||||||||  | |  |||| ||||||||||||||||||    
T  42011354 ttcttcttttggatttcttaaca--taccttaagtgcacaagttaacactacc 42011404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 25693664 - 25693782
Alignment:
Q  109 tcaattataaaaatattttattgaaat---gtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttct 205  Q
    |||| |||||||||| ||||||| |||   ||| | |||| |||||||||||||  ||||||| |||||||| |||||||||| | ||||||| | ||||    
T  25693664 tcaaatataaaaataatttattggaataatgtgtgcattaaatttaatctttaactttttaataaattgaattcacaaaatttaaaagaatatctcttct 25693763  T
Q  206 tttgggtttcttaacatgt 224  Q
    ||| | |||||||||||||    
T  25693764 tttagttttcttaacatgt 25693782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 253
Target Start/End: Complemental strand, 41816605 - 41816494
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttt-tcttttgggtttcttaacatgtgctctaagggcacaag 240  Q
    |||| ||||||| |||||| ||| || ||||| |||||||||||||| || ||||| || | | |||| | ||||||||||||||| |||||||| ||||    
T  41816605 attaaatttaatttttaatgtttaaa-gaattaaatgcacaaaatttaagggaataattctattttttagatttcttaacatgtgccctaagggcgcaag 41816507  T
Q  241 ttaacactaccca 253  Q
    |||||||||||||    
T  41816506 ttaacactaccca 41816494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 12289088 - 12289162
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaa 244  Q
    |||||||| |||||||||  ||||||||||| | ||||||| || |||||||||||| || ||||||||||||||    
T  12289088 aattgaatacacaaaattcaagagaatatttctacttttggattgcttaacatgtgcccttagggcacaagttaa 12289162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 3257482 - 3257407
Alignment:
Q  172 ttgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactac 250  Q
    ||||||||| ||||||||||| |||||||   ||||||| ||||||||||||||  |||| | ||||||||||||||||    
T  3257482 ttgaatgcataaaattttagaaaatattt---cttttggatttcttaacatgtgtcctaaagacacaagttaacactac 3257407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 41318139 - 41318210
Alignment:
Q  180 acaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||||||||| ||  |||||||||| |||||| ||||||||||||| | ||||||||| |||||||||||||||    
T  41318139 acaaaatttaaggaaatatttttt-ttttggatttcttaacatgtaccctaagggcataagttaacactaccc 41318210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 5984640 - 5984559
Alignment:
Q  165 taatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||| ||| ||||| ||||| ||| || | |||||||| |||||||||| ||||||||||| | ||||| ||||||||||||    
T  5984640 taataaatagaatgtacaaactttaagggtatatttttacttttgggttccttaacatgtgttataaggacacaagttaaca 5984559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 10083769 - 10083809
Alignment:
Q  148 tttaatctttaatattttaatgaattgaatgcacaaaattt 188  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  10083769 tttaatctttaatgttttaatgaattaaatgcacaaaattt 10083809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 243
Target Start/End: Original strand, 16843895 - 16844039
Alignment:
Q  100 gttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatatt 199  Q
    ||||||||||||| ||||  ||| |||| ||| |||||| | |||| ||||||| ||| |  || |||| ||   ||||||||||| || | ||||||||    
T  16843895 gttaatgaatcaaatatagtaattttttgttggaatgtgtgcattaaatttaatttttgaatttgtaataaacaaaatgcacaaaacttgaaagaatatt 16843994  T
Q  200 ttttc-ttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    | | | |||||||||||||| | ||||| ||||||||||||||||    
T  16843995 tctaccttttgggtttcttatcttgtgccctaagggcacaagtta 16844039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 18334517 - 18334397
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| |||| |||| ||| |  |||||  |||||| | ||| |||||||| || ||  ||||||| | || |||||||||||||||||| |||    
T  18334517 caagttaatgattcaaatatagaaaaaacttatttgaatgtgtgcattgcatttaatattaaactttttaatcatttaaatgcacaaaattttagaaaat 18334418  T
Q  197 attttttcttttgggtttctt 217  Q
     ||| ||||||| ||||||||    
T  18334417 gtttattcttttaggtttctt 18334397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 14310033 - 14309930
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| |||| |||| ||||| || |||| ||| ||   ||| ||||||| ||||||  ||||||| |||| |||||||||||||||| | |||    
T  14310033 caagttaatgattcaaatatagaaataattgattggaatatgtacattgcatttaaactttaactttttaatcaattaaatgcacaaaattttaaaaaat 14309934  T
Q  197 attt 200  Q
    ||||    
T  14309933 attt 14309930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 4702614 - 4702656
Alignment:
Q  166 aatgaattgaatgcacaaaattttagagaatattttttctttt 208  Q
    |||| ||||||||||||||||||||||||| |||| |||||||    
T  4702614 aatgcattgaatgcacaaaattttagagaacatttcttctttt 4702656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 30784302 - 30784221
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaa 244  Q
    ||||||| ||||||||||| ||||||| ||| || |||| | |||||| ||||||||| || || ||||| ||||||||||||    
T  30784302 ttttaattaattgaatgcataaaatttaagaaaaaatttctacttttgagtttcttaatatatg-tctaaaggcacaagttaa 30784221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 554326 - 554285
Alignment:
Q  205 ttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||| |||||||||||||||||| ||| ||||||||||||    
T  554326 ttttggatttcttaacatgtgctcttaggacacaagttaaca 554285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 29557595 - 29557636
Alignment:
Q  205 ttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||||| ||||||||||||||| |||||||||| |||||    
T  29557595 ttttgggttccttaacatgtgctcttagggcacaagataaca 29557636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 37833922 - 37833842
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    ||||| |||||||| || ||||||||  ||||||||||| | |||||| |||| ||||||| ||||||||| ||| ||||||    
T  37833922 ttttagtgaattgagtgtacaaaatta-agagaatatttctacttttgagttttttaacatatgctctaagagcataagtta 37833842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 141395 - 141471
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||||||||||||||  ||||||||||| | |||| || || ||||||||| |  || || |||||||||||||    
T  141395 aattgaatgcacaaaattcaagagaatatttctactttgggattgcttaacatgcgtccttagagcacaagttaaca 141471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 244
Target Start/End: Complemental strand, 3344893 - 3344865
Alignment:
Q  216 ttaacatgtgctctaagggcacaagttaa 244  Q
    |||||||||||||||||||||||||||||    
T  3344893 ttaacatgtgctctaagggcacaagttaa 3344865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 23358452 - 23358605
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||||||||||||||||||||||||| ||||| | |||||| |||||||||||||  |||| |||||||||||||||| ||||||| | |||    
T  23358452 caagttaatgaatcaattataaaaatattttatttaaatgcgtgtattatatttaatctttaaccttttcatgaattgaatgcacacaattttaaaaaat 23358551  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactac 250  Q
    |||| |||||||  |||| ||||||||||  |||||||||||||||||||||||    
T  23358552 atttcttcttttaagttttttaacatgtgtcctaagggcacaagttaacactac 23358605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 101 - 252
Target Start/End: Original strand, 23363754 - 23363903
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattt 200  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||  ||||||| ||||||||| ||||||||||| | |||||||    
T  23363754 ttaatgaatcaattataaaaatattttattggaatgcgtgtattacattttatctttaaccttttaataaattgaatgtacaaaattttaaaaaatattt 23363853  T
Q  201 tttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||  ||||  |||||||||||||||  ||||||| |||||||||||||||||    
T  23363854 tt--tttttagtttcttaacatgtgtcctaagggtacaagttaacactaccc 23363903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 36827893 - 36827786
Alignment:
Q  145 acatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaa 244  Q
    ||||||||| |||||  | ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  36827893 acatttaatttttaacttattaatgaattgaatgcacaaaattttagagaatatttcttcttttaggtttcttaacatgtgccctaagggcacaagttaa 36827794  T
Q  245 cactaccc 252  Q
    ||||||||    
T  36827793 cactaccc 36827786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 48634052 - 48633897
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| ||| || |||||||||| ||||||| ||||||   |||   |||| |||||||  ||||||||||||||||||| ||||||||||||||     
T  48634052 caagttaataaataaaatataaaaatagtttattggaatgtgtacattgtctttagtctttaactttttaatgaattgaatgcataaaattttagagaaa 48633953  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
     ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  48633952 tttttttcttttaggtttcttaacatgtgccctaagggcacaagttaacactaccc 48633897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 42306338 - 42306248
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42306338 ttttaatgaattgaatgcacaaaattttagagagtatttcttcttttgagtttcttaacatgtgctctaagggcacaagttaacactaccc 42306248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 125 - 252
Target Start/End: Original strand, 17354395 - 17354522
Alignment:
Q  125 tttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgt 224  Q
    ||||||| |||||| | ||  ||||||||||||||  ||||||| |||| |||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  17354395 tttattggaatgtgggcatatcatttaatctttaactttttaatcaattaaatgcataaaattttatagaatatttcttcttttgggtttcttaacatgt 17354494  T
Q  225 gctctaagggcacaagttaacactaccc 252  Q
    || |||||||||||||||||||||||||    
T  17354495 gccctaagggcacaagttaacactaccc 17354522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 37828345 - 37828492
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatcttt-aatattttaatgaattgaatgcacaaaattttagagaa 195  Q
    ||||||||| |||||| |||| ||||| ||||||| |||| | |||||| ||||||||||| ||  ||||||| ||||||||||||||||||| ||||||    
T  37828345 caagttaataaatcaaatatagaaatagtttattggaatgcgtgtattaaatttaatcttttaactttttaataaattgaatgcacaaaatttaagagaa 37828444  T
Q  196 tattttttcttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    ||||| ||||||| ||||||||||||| ||| | ||||||||||||||    
T  37828445 tatttcttcttttaggtttcttaacatatgccccaagggcacaagtta 37828492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 43252005 - 43251852
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| | || |||| ||||| ||||||  |||||| || |||||||||||||||||| ||||||| |||| |||||| ||||||||| | |||    
T  43252005 caagttaatgatttaaatatagaaataatttattagaatgtgtgttttacatttaatctttaattttttaatcaattaaatgcataaaattttaaataat 43251906  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacc 251  Q
    |||| || ||||  ||||||||||||||| |||||||||||||||||| ||||||    
T  43251905 atttctt-ttttaagtttcttaacatgtgttctaagggcacaagttaagactacc 43251852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 31289546 - 31289441
Alignment:
Q  147 atttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||| ||||||| || |||||  |||||||||||||||| ||| ||||||||||||||    
T  31289546 atttaatctttaatgttttaatgaattgaatgcacaaagtttaagataatatttctttttttgaatttcttaacatgtgctataaaggcacaagttaaca 31289447  T
Q  247 ctaccc 252  Q
    ||||||    
T  31289446 ctaccc 31289441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 108 - 252
Target Start/End: Original strand, 25971454 - 25971593
Alignment:
Q  108 atcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttt 207  Q
    ||||| |||||||||  ||||||| ||||   | |||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| || |||    
T  25971454 atcaaatataaaaattgtttattggaatgcatgcattacatttaatatttaattttttaatgaattgaatgcacaaaattttagtgaatatttctt-ttt 25971552  T
Q  208 tgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    | | ||||||||||||    |||||| ||||||||||||||||||    
T  25971553 ttgatttcttaacatg----ctaaggacacaagttaacactaccc 25971593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 142 - 246
Target Start/End: Original strand, 676282 - 676388
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaa---catgtgctctaagggcaca 238  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||| || |||||||| || |||||| ||||||||   |||||| ||||||||||||    
T  676282 attaaatttaatctttaatgttttaatgaattgaatgcacaaaatttaagggaatatttctt-ttttggatttcttaacatcatgtgttctaagggcaca 676380  T
Q  239 agttaaca 246  Q
    ||||||||    
T  676381 agttaaca 676388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 40019890 - 40019735
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| |||| |||| ||| |  ||||||||||||| | ||| |||||||| |||||  ||||||| | || ||| ||||||| ||||||||||    
T  40019890 caagttaatga-tcaaatatagaaaaaacttattgaaatgtgtgcattgcatttaatatttaactttttaatcatttaaatacacaaaagtttagagaat 40019792  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccca 253  Q
      || ||||||| |||||||||||||||||  ||| |||||||||||||||||||||    
T  40019791 gcttcttcttttaggtttcttaacatgtgccataaaggcacaagttaacactaccca 40019735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 20009773 - 20009654
Alignment:
Q  106 gaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttct 205  Q
    ||||||| |||| ||||| ||||||||||||||   |||||||||||||| |||  |||| || ||||||||||||||||||||||| ||||||| ||||    
T  20009773 gaatcaaatatagaaataatttattgaaatgtgtc-attacatttaatctgtaacttttttataaattgaatgcacaaaattttagaaaatatttcttct 20009675  T
Q  206 tttgggtttcttaacatgtgc 226  Q
    ||||  ||| |||||||||||    
T  20009674 tttgaattttttaacatgtgc 20009654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 251
Target Start/End: Original strand, 25594582 - 25594716
Alignment:
Q  116 taaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttc 215  Q
    |||||||| | ||||  |||||| | |||| |||||||||||||||||||||| ||||||||||||||||||| ||  |||||||||| ||||   ||||    
T  25594582 taaaaataatgtattagaatgtgtgcattaaatttaatctttaatattttaataaattgaatgcacaaaatttaaggaaatatttttt-tttttaatttc 25594680  T
Q  216 ttaacatgtgctctaagggcacaagttaacactacc 251  Q
    ||||||| ||  |||| |||||||||||||| ||||    
T  25594681 ttaacatatgtcctaaaggcacaagttaacaatacc 25594716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 48047012 - 48046893
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| |||||| |||| ||||   |||||| |||||| | |||||||||||| ||||   |||||||||||| |||||||  ||||||||||||     
T  48047012 caagttaataaatcaaatatagaaattaattattggaatgtgtgcattacatttaatatttagccttttaatgaattaaatgcac--aattttagagaaa 48046915  T
Q  197 attttttcttttgggtttctta 218  Q
    |||| |||||||||||||||||    
T  48046914 atttcttcttttgggtttctta 48046893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 3622276 - 3622361
Alignment:
Q  165 taatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactac 250  Q
    |||||||||||||||||||||||||| | ||||||| |||||||   ||||||||||| |||||||||| ||||| |||| |||||    
T  3622276 taatgaattgaatgcacaaaattttaaaaaatatttcttcttttaaatttcttaacatatgctctaaggacacaaattaatactac 3622361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 48339725 - 48339802
Alignment:
Q  114 tataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagag 193  Q
    |||| ||||| | ||||| |||||||  ||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  48339725 tatagaaatagtctattggaatgtgc--attacatttaatctttaattttttaatgaattgaatgaacaaaattttagag 48339802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 3767263 - 3767108
Alignment:
Q  97 caagttaatgaatcaattataaaaa-tattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaa 195  Q
    |||||||||||||||| | |||||| || ||||||  ||| |  | |||||||||||| |||||  ||||||| |||| ||| ||   ||||||||| ||    
T  3767263 caagttaatgaatcaaatgtaaaaaataatttatttgaatatatgcattacatttaatatttaactttttaataaattaaatacatcgaattttagaaaa 3767164  T
Q  196 tattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacc 251  Q
    ||||| ||||||| |||||||||||||||||  ||| ||||||| ||| |||||||    
T  3767163 tatttattcttttaggtttcttaacatgtgccataaaggcacaacttagcactacc 3767108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 11885514 - 11885442
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggttt 214  Q
    ||||||||||||||||| | ||||||||| ||||||| ||||||||||| | ||||||| |||||||| ||||    
T  11885514 attacatttaatctttagttttttaatgagttgaatgtacaaaattttataaaatatttcttcttttgagttt 11885442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 42121404 - 42121480
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||||| ||||||||| ||||||| ||| | |||||||||| |||||||||||| || |||||| |||||||||    
T  42121404 aattgaatgtacaaaatttaagagaatgtttctacttttgggttgcttaacatgtgcccttagggcataagttaaca 42121480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 32903088 - 32903142
Alignment:
Q  195 atattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacacta 249  Q
    |||||| ||||||||| |||||||||||||  |||||||||||||||||||||||    
T  32903088 atatttcttcttttggttttcttaacatgtattctaagggcacaagttaacacta 32903142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 43951980 - 43951920
Alignment:
Q  127 tattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaatt 187  Q
    ||||| |||||| | |||| ||||||| |||||||||||||||||||||||||| ||||||    
T  43951980 tattggaatgtgtgcattaaatttaatatttaatattttaatgaattgaatgcataaaatt 43951920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 27772969 - 27772914
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtg 225  Q
    ||||||||||||||||||| ||| |||||||||  ||||||||| |||||||||||    
T  27772969 aattgaatgcacaaaatttgagataatatttttatttttgggttgcttaacatgtg 27772914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 48723307 - 48723234
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    ||||||||| ||||||||| ||| ||| ||| |  ||||||||| ||||||||||||  |||||||||||||||    
T  48723307 aattgaatgtacaaaatttaagataatgtttctatttttgggttgcttaacatgtgccataagggcacaagtta 48723234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 39983188 - 39983244
Alignment:
Q  190 agagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||| ||||| || |||||||||| ||||||||||| || ||||||||||||||||    
T  39983188 agagagtatttcttgttttgggttttttaacatgtgcccttagggcacaagttaaca 39983244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 26715149 - 26715204
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtg 225  Q
    ||||||||||||||||||  |||||||||||||  |||||| || |||||||||||    
T  26715149 aattgaatgcacaaaattcaagagaatatttttatttttggattgcttaacatgtg 26715204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 32546829 - 32546870
Alignment:
Q  205 ttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||||| ||||| |||||| |||||||||||||||||||    
T  32546829 ttttgggttccttaatatgtgccctaagggcacaagttaaca 32546870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 51295848 - 51295692
Alignment:
Q  98 aagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaata 197  Q
    ||||||||||||||| | || ||||| ||||||| |||||| | ||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||    
T  51295848 aagttaatgaatcaaatgtagaaataatttattggaatgtgtgcattacatttaatctttaactttttaatgaattgaatgcacaaaattttagaaatta 51295749  T
Q  198 ttttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacccata 255  Q
    ||| || |||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  51295748 tttatt-ttttgggtttcttaacatgtgccctaagggcacaagttagcagtacccata 51295692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 10881961 - 10881805
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||| ||||| |||| ||||  ||||||  |||||| | ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  10881961 caagttaatgcatcaaatatagaaattgtttattagaatgtgtgcattacatttaatctttaattttttaatgaattgaatgcataaaattttagggaat 10881862  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaag-ttaacactaccc 252  Q
    |||| ||||||||| |||||| |||||||| ||||||||||||| ||||||||||||    
T  10881861 atttcttcttttggttttcttgacatgtgccctaagggcacaagtttaacactaccc 10881805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 43949134 - 43949246
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    ||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  43949134 attacatttaatcttcaactttgtaatgaattgaatgcacaaaattttagagaatatttcttcttttgggtttcttaacatgtgccctaagggcacaagt 43949233  T
Q  242 taacactacccat 254  Q
    || ||||||||||    
T  43949234 tagcactacccat 43949246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 101 - 252
Target Start/End: Complemental strand, 29587251 - 29587100
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattt 200  Q
    ||||||| |||| |||| |||||  |||||| |||||| | |||  ||||| |||||||  ||| |||| |||||||||||| |||||||||||| ||||    
T  29587251 ttaatgattcaaatatagaaataaattattggaatgtgtgcattttatttagtctttaacttttaaatgcattgaatgcacataattttagagaacattt 29587152  T
Q  201 tttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
     ||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  29587151 attcttttgggtttcttaacatgtgccctaagggcacaagttcacactaccc 29587100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 34711045 - 34710890
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||| ||| |||| |||||  | ||||||||||| |||||||||||||||||||   ||||||||| ||||||||||| ||||||| | |||    
T  34711045 caagttaatgaaacaaatatagaaatagctcattgaaatgtgtgtattacatttaatctttagctttttaatgagttgaatgcacacaattttataaaat 34710946  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    | || ||||||| || |||||||||||| | |||||| ||||||||||||||||||    
T  34710945 acttcttcttttaggattcttaacatgtaccctaaggacacaagttaacactaccc 34710890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 18436400 - 18436283
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    |||| |||||||||||||| |||||||||||||||||| |||| ||| |   ||||||| || |||||| ||||||||||||||| ||||||||||||||    
T  18436400 attaaatttaatctttaatgttttaatgaattgaatgctcaaagtttaaagaaatatttctttttttggatttcttaacatgtgccctaagggcacaagt 18436301  T
Q  242 taacactacccataaaaa 259  Q
    ||||||||||||||||||    
T  18436300 taacactacccataaaaa 18436283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 33828204 - 33828093
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||||||| |||| ||||| ||||||| |||||| ||||||||| ||||||||||  ||||||| ||||||||||| |||||||||||||||    
T  33828204 caagttaatgaatcaaatatataaatagtttattggaatgtgtgtattacatctaatctttaactttttaataaattgaatgcataaaattttagagaat 33828105  T
Q  197 attttttctttt 208  Q
    ||||||| ||||    
T  33828104 attttttttttt 33828093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 33839761 - 33839872
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||||||| |||| ||||| ||||||| |||||| ||||||||| ||||||||||  ||||||| ||||||||||| |||||||||||||||    
T  33839761 caagttaatgaatcaaatatataaatagtttattggaatgtgtgtattacatctaatctttaactttttaataaattgaatgcataaaattttagagaat 33839860  T
Q  197 attttttctttt 208  Q
    ||||||| ||||    
T  33839861 attttttttttt 33839872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 252
Target Start/End: Complemental strand, 51050170 - 51050028
Alignment:
Q  109 tcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttctttt 208  Q
    |||| |||| ||||| ||||||| |||||| ||| ||||||||||| ||||| ||||||| |||| ||||||||| |||||||||||||||| || ||||    
T  51050170 tcaaatatataaataatttattggaatgtgtgtaatacatttaatcgttaattttttaatcaattaaatgcacaatattttagagaatatttcttttttt 51050071  T
Q  209 gggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
     ||||||||||||||||| | |||| |||||||||||| |||||    
T  51050070 aggtttcttaacatgtgc-ccaaggacacaagttaacattaccc 51050028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 42549320 - 42549167
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| |||| ||||||||||  | |||| ||||||  ||||  ||||| |||||||  ||| |||| |||||||| | |||||||||||||||    
T  42549320 caagttaatgattcaaatataaaaataaataattggaatgtgtatattttatttagtctttaacttttaaatgcattgaatgtataaaattttagagaat 42549221  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactac 250  Q
    |||| ||||||| ||||||||||||| ||| |||| ||||||| ||||||||||    
T  42549220 atttcttcttttaggtttcttaacatatgccctaaaggcacaaattaacactac 42549167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 44595799 - 44595706
Alignment:
Q  129 ttgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacat 222  Q
    |||||||||| | ||||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||||||    
T  44595799 ttgaaatgtgtgcattacatttaaactttaactttttaatgaattgaatgcacaaaattttaaagaatatttcttcttttagatttcttaacat 44595706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 39275847 - 39275969
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| ||||  ||| |||||  ||||||||||||| | |||  |||||||||||||  ||| ||||  ||||||||| |||||||||||||||    
T  39275847 caagttaatgattcaaacatataaataaattattgaaatgtgtgcattttatttaatctttaacttttaaatgctttgaatgcataaaattttagagaat 39275946  T
Q  197 attttttcttttgggtttcttaa 219  Q
    |||| ||||||||||||||||||    
T  39275947 atttcttcttttgggtttcttaa 39275969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 24466667 - 24466519
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaat-gtgcgtattacatttaatctttaa-tattttaatgaattgaatgcacaaaattttagaga 194  Q
    ||||||||| |||||| || | ||||| |||||| |||  ||| | |||||||||||||||||| | ||||||| ||||||||| |||||||||||||||    
T  24466667 caagttaataaatcaaataaagaaatagtttattaaaaacgtgtgcattacatttaatctttaacttttttaattaattgaatgtacaaaattttagaga 24466568  T
Q  195 atattttttcttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    |||||| || |||||  ||| ||||||||||| |||||  |||||||||    
T  24466567 atatttctttttttgaattttttaacatgtgccctaagaacacaagtta 24466519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 252
Target Start/End: Complemental strand, 18023911 - 18023760
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattt 200  Q
    ||||||| |||| |||| ||||| ||||||||||| || | | | || |||||||||||  ||||||||||||||||| | |||||||| || |||||||    
T  18023911 ttaatgattcaaatatagaaataatttattgaaatatgtgcactgcaattaatctttaactttttaatgaattgaatgaataaaatttttgaaaatattt 18023812  T
Q  201 tttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
     |||| |||  ||||||||||||||||||||   ||||| |||||| |||||    
T  18023811 cttctcttgaatttcttaacatgtgctctaaatacacaaattaacattaccc 18023760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 252
Target Start/End: Original strand, 15401721 - 15401831
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    |||| ||||||| |||||| ||||||| ||||||||||||||| ||| |||||||| || || |||| | ||||||||||||||| |||| | |||||||    
T  15401721 attaaatttaatatttaatgttttaatcaattgaatgcacaaagtttaagagaataattctttttttagatttcttaacatgtgccctaaagacacaagt 15401820  T
Q  242 taacactaccc 252  Q
    ||| |||||||    
T  15401821 taatactaccc 15401831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 36313612 - 36313713
Alignment:
Q  151 aatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactac 250  Q
    |||||||||  |||||||||||||||| |||||||||||| | ||||||| ||||||||  ||||||||||||| || |||| | |||||||| || |||    
T  36313612 aatctttaactttttaatgaattgaattcacaaaattttaaaaaatatttcttcttttgactttcttaacatgtactttaagagtacaagttagcattac 36313711  T
Q  251 cc 252  Q
    ||    
T  36313712 cc 36313713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 15279135 - 15279008
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaatt-ttagagaa 195  Q
    ||||||||||| |||| |||| ||||| ||||||  |||||| | ||| |||||||| |||||  ||||||| |||||||||||||||||| | | | ||    
T  15279135 caagttaatgattcaaatatagaaataatttattagaatgtgtgcattgcatttaatatttaactttttaataaattgaatgcacaaaattataaaaaaa 15279036  T
Q  196 tattttttcttttgggtttcttaacatg 223  Q
    ||||| |||| ||| |||||||||||||    
T  15279035 tatttcttctcttgagtttcttaacatg 15279008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 31262430 - 31262532
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    |||||||||||| ||||   ||||||||| ||||||| ||||||||| | | ||||||| || |||| ||||||||||||||||| || |||||||| ||    
T  31262430 attacatttaatatttagctttttaatgagttgaatgtacaaaatttgataaaatatttctttttttaggtttcttaacatgtgccctgagggcacaggt 31262529  T
Q  242 taa 244  Q
    |||    
T  31262530 taa 31262532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 19569151 - 19569046
Alignment:
Q  98 aagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatcttt-aatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||| |||  || ||||| ||||||||||  || ||||| |||| ||||||| ||  ||||||| ||||||||||||||||||||| |||||    
T  19569151 aagttaatgaattaatagtagaaataatttattgaaaaatgtgtatttcattaaatcttttaactttttaataaattgaatgcacaaaattttatagaat 19569052  T
Q  197 attttt 202  Q
    ||||||    
T  19569051 attttt 19569046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 39412494 - 39412436
Alignment:
Q  194 aatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||||||| |||||||| |||||||||||||||| ||||| ||||||||||||| |||||    
T  39412494 aatatttcttcttttgagtttcttaacatgtgccctaagagcacaagttaacattaccc 39412436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 46056815 - 46056886
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagg 233  Q
    |||||||||||||||  |||||||||||| |||||| || ||||||| || || |||||||||||| |||||    
T  46056815 ttttaatgaattgaaatcacaaaattttaaagaatacttcttcttttaggatttttaacatgtgctttaagg 46056886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 42728214 - 42728117
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacccataaaaaa 260  Q
    ||||||| || |||||  ||||||||| |||| |||||| |  ||||||||| ||||||||||||  ||||||||||| ||| || | |||||||||||    
T  42728214 ttttaattaactgaatatacaaaatttaagaggatatttctatttttgggttgcttaacatgtgccgtaagggcacaaattacca-tccccataaaaaa 42728117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 46587789 - 46587870
Alignment:
Q  165 taatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacacta 249  Q
    |||| |||| |||||||||||||||||| ||||||| || ||    |||||||||||| ||  |||||||||||| |||||||||    
T  46587789 taatcaattaaatgcacaaaattttagaaaatatttgttttta---gtttcttaacatatgtcctaagggcacaaattaacacta 46587870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 47588527 - 47588565
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaacactacc 251  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  47588527 ttcttaacatgtgctcttagggcacaagttaacattacc 47588565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 243
Target Start/End: Complemental strand, 47762744 - 47762714
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagtta 243  Q
    |||||||||||||||||||||||||||||||    
T  47762744 ttcttaacatgtgctctaagggcacaagtta 47762714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 298235 - 298202
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||||||||||| |||||||||||||||||||    
T  298235 ttcttaacatgtgccctaagggcacaagttaaca 298202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 41884652 - 41884595
Alignment:
Q  210 ggtttcttaacatgtgctctaagggcacaagttaacactacccataaaaaatttaaaa 267  Q
    |||| ||||||||||||  | | |||||||||||||| ||||||||||||| ||||||    
T  41884652 ggttccttaacatgtgcctttaaggcacaagttaacattacccataaaaaaattaaaa 41884595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 32544807 - 32544775
Alignment:
Q  214 tcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||||||||| |||||||||||||||||||    
T  32544807 tcttaacatgtgccctaagggcacaagttaaca 32544775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 46220704 - 46220644
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacat 222  Q
    ||||||||| ||||||||||||||||| ||  ||||||| || |||||  |||||||||||    
T  46220704 ttttaatgagttgaatgcacaaaatttaaggaaatatttctttttttgaatttcttaacat 46220644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 4e-42; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 39108670 - 39108515
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| |||| |||||||||| ||||||| |||||| | ||| ||||||| ||||||| ||||||| ||||  |||||||||||||||||||||    
T  39108670 caagttaatgattcaaatataaaaataatttattggaatgtgtgcattgcatttaaactttaattttttaatcaattatatgcacaaaattttagagaat 39108571  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    |||| || ||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  39108570 atttcttattttgagtttcttaacatgtgccctaaaggcacaagttaacactaccc 39108515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 4993321 - 4993209
Alignment:
Q  140 gtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaa 239  Q
    ||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||   ||||||||||||||| |||| |||||||    
T  4993321 gtattgcatttaatctttaactttttaatgaattaaatgcacaaaattttagagaatatttcttcttttatatttcttaacatgtgccctaatggcacaa 4993222  T
Q  240 gttaacactaccc 252  Q
    |||||||||||||    
T  4993221 gttaacactaccc 4993209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 251
Target Start/End: Original strand, 32062274 - 32062427
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatatttt-aatgaattgaatgcacaaaattttagagaa 195  Q
    |||||||||||||||| |||| ||||| || |||| ||||||   |||||||||||||||| || |||| ||||||||||||||||||||||||| | ||    
T  32062274 caagttaatgaatcaaatatagaaatagtt-attggaatgtgtacattacatttaatcttttatctttttaatgaattgaatgcacaaaattttaaaaaa 32062372  T
Q  196 tattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacc 251  Q
    ||||| |||||||| |||||||||||||| | |||||| ||||||||| |||||||    
T  32062373 tatttcttcttttgagtttcttaacatgttc-ctaaggtcacaagttagcactacc 32062427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 40740692 - 40740827
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||| ||||||| |||| || || ||||||  ||||||   ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  40740692 caagttaaagaatcaaatatagaagtagtttattagaatgtgtacattacatttaatctttaactttttaatgatttgaatgcacaaaattttagagaat 40740791  T
Q  197 attttttcttttgggtttcttaacatgtgctctaag 232  Q
    |||| ||||||| ||||| ||||||||||| |||||    
T  40740792 atttattcttttaggttttttaacatgtgccctaag 40740827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 4989352 - 4989195
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaa- 195  Q
    ||||||||| |||||| |||| ||||| ||||||| |||||| |||||||||||||||||||   ||||||| ||| ||||||||||||||||||||||     
T  4989352 caagttaattaatcaaatatagaaataatttattgtaatgtgtgtattacatttaatctttagctttttaataaatagaatgcacaaaattttagagaat 4989253  T
Q  196 -tattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
     | |||||||||||   ||||||||||||||   |||  |||||||||||||||||||    
T  4989252 tttttttttcttttaaatttcttaacatgtgtcataaaagcacaagttaacactaccc 4989195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 252
Target Start/End: Complemental strand, 44976228 - 44976091
Alignment:
Q  114 tataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtt 213  Q
    |||||||||| |||||||||| ||| | |||| |||||||||||||| ||||| |||||| || ||||| ||||||||||||||||||||||||||| ||    
T  44976228 tataaaaataatttattgaaaagtgtgcatta-atttaatctttaattttttattgaattaaacgcacataattttagagaatattttttcttttggatt 44976130  T
Q  214 tcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||||| ||||||   ||| | ||||||||||||||||||    
T  44976129 tcttagcatgtgtcttaaagacacaagttaacactaccc 44976091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 148 - 255
Target Start/End: Complemental strand, 3727222 - 3727115
Alignment:
Q  148 tttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacac 247  Q
    |||||||||||   ||||||||||||||||||||||||||||| | ||||||  ||||||| ||||| ||||||||||||||||| ||| ||||||||||    
T  3727222 tttaatctttagctttttaatgaattgaatgcacaaaattttataaaatattcattcttttaggttttttaacatgtgctctaagagcagaagttaacac 3727123  T
Q  248 tacccata 255  Q
    ||||||||    
T  3727122 tacccata 3727115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 8669531 - 8669378
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| |||||||  || ||||| || |||| |||||| | |||  ||||||| |||||| |||||||||||||||| ||||||| |||| |||||    
T  8669531 caagttaataaatcaatggtagaaatagttgattggaatgtgtgcatttgatttaatatttaattttttaatgaattgaatacacaaaagtttaaagaat 8669432  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactac 250  Q
    ||||||  |||||  ||||||||||||||  ||||| |||||||||| ||||||    
T  8669431 atttttaattttgaatttcttaacatgtgtcctaagagcacaagttagcactac 8669378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 43027923 - 43027809
Alignment:
Q  147 atttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||| |||||  ||||||| ||||||||||| ||||||||| | | |||||||||||||| ||||||||||||||||  |||| |||||||||||||    
T  43027923 atttaatatttaactttttaataaattgaatgcataaaattttaaaaattattttttcttttgagtttcttaacatgtgcaataagagcacaagttaaca 43027824  T
Q  247 ctacccataaaaaat 261  Q
     ||||  ||||||||    
T  43027823 ttacctttaaaaaat 43027809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 5957130 - 5957038
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaatttt 189  Q
    |||||||||||||||||  || ||||| ||||||| |||||||| ||| ||| ||||||||||  ||||||||||||||||||||||||||||    
T  5957130 caagttaatgaatcaatagtagaaataatttattggaatgtgcgcatttcatataatctttaactttttaatgaattgaatgcacaaaatttt 5957038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 36434673 - 36434792
Alignment:
Q  100 gttaatgaatcaattataaaaatattttattgaaatgtgcgtattacattt-aatctttaatattttaatgaattgaatgcacaaaattttagagaatat 198  Q
    |||||||| |||| |||||||||| |||||||||||||| | ||| ||||| ||||||| |  |||| || ||||||||||||||||||||| |||||||    
T  36434673 gttaatgattcaaatataaaaataatttattgaaatgtgtgcattgcattttaatctttcacttttttataaattgaatgcacaaaattttaaagaatat 36434772  T
Q  199 tttttcttttgggtttctta 218  Q
    || |||||| | ||||||||    
T  36434773 ttcttctttcgagtttctta 36434792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 252
Target Start/End: Complemental strand, 10361220 - 10361103
Alignment:
Q  135 tgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaaggg 234  Q
    |||| ||||| |||||||| |||||  ||||||| | || ||||||||||||  |||||||  ||| ||||||||| |||||||||||||||  ||| ||    
T  10361220 tgtgtgtattgcatttaatatttaactttttaatcatttaaatgcacaaaatcatagagaaagtttcttcttttggatttcttaacatgtgccttaaagg 10361121  T
Q  235 cacaagttaacactaccc 252  Q
    ||||||||||||||||||    
T  10361120 cacaagttaacactaccc 10361103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 38666419 - 38666526
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    |||| |||||||||||||| ||| ||||| ||||||||||||| ||| ||||||| |||||| ||||   ||||||||||||||  ||||||||||||||    
T  38666419 attaaatttaatctttaatgttt-aatgacttgaatgcacaaagtttaagagaat-ttttttattttttatttcttaacatgtgtcctaagggcacaagt 38666516  T
Q  242 taacactacc 251  Q
    ||||||||||    
T  38666517 taacactacc 38666526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 97 - 248
Target Start/End: Original strand, 19174068 - 19174220
Alignment:
Q  97 caagttaatgaatcaattata-aaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaa 195  Q
    ||||||||||| |||| |||| |||| |  |||||  |||||| | ||| |||||||| |||||  ||||||| | || |||||| ||||||||| ||||    
T  19174068 caagttaatgattcaaatatagaaaaaaaattatttgaatgtgtgcattgcatttaatatttaactttttaatcatttaaatgcataaaattttaaagaa 19174167  T
Q  196 tattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacact 248  Q
    | ||| ||||||| ||||| |||||||||| ||||| ||||||||||||||||    
T  19174168 tgtttcttcttttaggttttttaacatgtgttctaaaggcacaagttaacact 19174220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 252
Target Start/End: Complemental strand, 42655140 - 42655032
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||| | | |||| ||||  ||||   ||||||||||| ||  ||||||||||||||    
T  42655140 attaaatttaatctttaatgttttaatgaattgaatgcacaaagtttaaaaaaataatttt--tttttaatttcttaacatatgtcctaagggcacaagt 42655043  T
Q  242 taacactaccc 252  Q
    |||||||||||    
T  42655042 taacactaccc 42655032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 30203408 - 30203508
Alignment:
Q  149 ttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacact 248  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||||||  | |||| ||||  ||||||||||   |||| ||| |||||||||||    
T  30203408 ttaatctttaactttttaatgagttgaatgcacaaaattttagagaatatttcattttttaggttctttaacatgtgtcttaagagcataagttaacact 30203507  T
Q  249 a 249  Q
    |    
T  30203508 a 30203508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 6108805 - 6108904
Alignment:
Q  148 tttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacac 247  Q
    ||||||||||||| |||||||||||||||| |||||||||| |  ||||| ||||| |||||| ||| ||||||| ||  |||| | |||||||||||||    
T  6108805 tttaatctttaatgttttaatgaattgaatacacaaaatttaaaggaataattttt-ttttggatttattaacatatgtcctaaagacacaagttaacac 6108903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 35878961 - 35879064
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| |||||| ||||  |||   |||||||||| || | |||| |||||||||||||  ||| ||||| ||||||||| ||||||| |||||||    
T  35878961 caagttaataaatcaaatatatgaatgagttattgaaatatgtgcattaaatttaatctttaacttttcaatgatttgaatgcataaaatttaagagaat 35879060  T
Q  197 attt 200  Q
    ||||    
T  35879061 attt 35879064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 11008136 - 11007983
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| | || ||||  || | |||||||||||||| | |||  ||||||| ||| |  ||||||| | || |||||||||||| ||||| ||     
T  11008136 caagttaatgatttaaatataggaaaaatttattgaaatgtgtgcattgaatttaatatttcactttttaatcatttaaatgcacaaaatgttagataaa 11008037  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
     ||| ||||||| ||  |||||||| || |||| | ||||||||||||||||||||    
T  11008036 gtttcttcttttagg--tcttaacacgtactctcaaggcacaagttaacactaccc 11007983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 4810927 - 4811058
Alignment:
Q  120 aatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaa 219  Q
    |||| ||||||||||| || | | || |||||||||| ||  ||||||| |||||| || ||| ||||||||||||||| | || |||| | | | ||||    
T  4810927 aatagtttattgaaatatgtgaaatatatttaatcttaaaatttttaattaattgattgtacacaattttagagaatatatctttttttagttcttttaa 4811026  T
Q  220 catgtgctctaagggcacaagttaacactacc 251  Q
    | ||||  |||| | |||||||||||||||||    
T  4811027 cgtgtgtcctaaagacacaagttaacactacc 4811058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 246
Target Start/End: Complemental strand, 8769039 - 8768996
Alignment:
Q  203 tcttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||    
T  8769039 tcttttaggtttcttaacatgtgctcttaggacacaagttaaca 8768996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 9210000 - 9210073
Alignment:
Q  152 atctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtg 225  Q
    ||||||||  |||||| ||||||||||||||||||||| |   |||||| ||||||||  ||| ||||||||||    
T  9210000 atctttaactttttaaagaattgaatgcacaaaatttttggatatatttcttcttttgaattttttaacatgtg 9210073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 11257891 - 11257858
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||||||||||| |||||||||||||||||||    
T  11257891 ttcttaacatgtgccctaagggcacaagttaaca 11257858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 122573 - 122419
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||||||| |||||||||||||||||| || ||  ||||||||||||||||||||| ||||||| ||||||||||||| ||||| ||| ||     
T  122573 caagttaatgaatcaaatataaaaatattttattggaacgtatgtattacatttaatctttaattttttaatcaattgaatgcacataatttaagataaa 122474  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacc 251  Q
     ||| ||||||| | ||| |||||||||| || |||| |||||||||||||||||    
T  122473 gtttattcttttagattttttaacatgtgttccaaggacacaagttaacactacc 122419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 9e-37; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 42791192 - 42791040
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||| ||| | ||||||| || ||||| | |||||| | |||||||||||| |||||  ||||||||||||||||||||||||||| |||||||    
T  42791192 caagttaatgcatcgaatataaaagtaatttatgggaatgtgtgcattacatttaat-tttaagtttttaatgaattgaatgcacaaaattt-agagaat 42791095  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacc 251  Q
    |||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  42791094 atttcttctttttggtttcttaacatgtgctataagggcacaagttaacgctacc 42791040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 53287412 - 53287567
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| |||| |||| ||||  ||||||| |||||| | ||| |||||||| | |||  ||| |||||||||||||||||||||||||||||||    
T  53287412 caagttaatgattcaaatatagaaatcatttattggaatgtgtgcattgcatttaatttgtaacttttcaatgaattgaatgcacaaaattttagagaat 53287511  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    |||| ||||||||| |||||||||||||||  ||||| |||| |||||||||||||    
T  53287512 atttcttcttttggatttcttaacatgtgccttaaggtcacaggttaacactaccc 53287567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 12789957 - 12789834
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagt 241  Q
    ||||||||||||||||||  ||||||| |||||||| || ||||||||||| ||||||| |||||||| |||||||||||||||| |||||| |||||||    
T  12789957 attacatttaatctttaactttttaataaattgaatacataaaattttagaaaatatttattcttttgagtttcttaacatgtgccctaaggacacaagt 12789858  T
Q  242 taacactacccataaaaaatttaaa 266  Q
    |||||||| ||| ||||||||||||    
T  12789857 taacacta-ccaaaaaaaatttaaa 12789834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 100 - 251
Target Start/End: Complemental strand, 37700360 - 37700210
Alignment:
Q  100 gttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatatt 199  Q
    ||||||||||||| ||| |||||| ||||||| |||||| | |||| ||||||| || ||| ||||||||||||||||||||| |||||||||||||| |    
T  37700360 gttaatgaatcaaatatgaaaatagtttattggaatgtgtgcattatatttaattttaaattttttaatgaattgaatgcacacaattttagagaatagt 37700261  T
Q  200 ttttcttttgggtttcttaacatgt-gctctaagggcacaagttaacactacc 251  Q
    | || |||| ||||||||||||| | |||| ||||||||| ||||||||||||    
T  37700260 tctt-ttttaggtttcttaacatatggctc-aagggcacaggttaacactacc 37700210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 103 - 214
Target Start/End: Complemental strand, 28392265 - 28392154
Alignment:
Q  103 aatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttt 202  Q
    |||||||||| || | ||||| |||||||||||||| | ||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||| |    
T  28392265 aatgaatcaaataaacaaatagtttattgaaatgtgtgcattacatttaatctttaactttttaatgtattgaatgcacaaaattttaaagaatatttct 28392166  T
Q  203 tcttttgggttt 214  Q
    |||||| |||||    
T  28392165 tcttttaggttt 28392154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 103 - 251
Target Start/End: Complemental strand, 24657351 - 24657203
Alignment:
Q  103 aatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttt 202  Q
    ||||| |||| |||| ||||  ||||||| |||||| | |||| |||||||||||||  ||||||| |||||||| |||||||||||||| ||||||| |    
T  24657351 aatgattcaaatatagaaattatttattggaatgtgtgcattatatttaatctttaactttttaataaattgaatacacaaaattttagaaaatatttct 24657252  T
Q  203 tcttttgggtttcttaacatgtgctctaagggcacaagttaacactacc 251  Q
    |  ||||  ||||||||||||||  ||||||||| ||||||||||||||    
T  24657251 ttctttgaatttcttaacatgtgtcctaagggcataagttaacactacc 24657203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 36771826 - 36771906
Alignment:
Q  178 gcacaaaat-tttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacccataaa 257  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  36771826 gcacaaaatctttagggaatattttttcttttaggtttcttaacatgtgttctaagggcacaagttaacactacccataaa 36771906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 20379019 - 20379174
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| |||| |||| |||||  |||||  |||||| | |||  ||||| |||||||  ||| |||| |||||||||||||||||||||||||     
T  20379019 caagttaatgattcaaatatagaaataaattattagaatgtgtgcattttatttagtctttaacttttaaatgcattgaatgcacaaaattttagagaac 20379118  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    |||| |||||||| ||||||||||||||   |||||| |||||||||||| |||||    
T  20379119 atttcttcttttgagtttcttaacatgtatcctaaggacacaagttaacattaccc 20379174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 30732785 - 30732940
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| | |||| |||||||||| ||| ||| |||||  | |||  ||||||| |||||  ||||||||||||||||  ||||||||||| | |||    
T  30732785 caagttaataattcaagtataaaaataatttgttggaatgtatgcattgtatttaatatttaactttttaatgaattgaatttacaaaattttaaaaaat 30732884  T
Q  197 attttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    |||| |||||||||||||||||||||||||||| | |  |||||||| ||||||||    
T  30732885 atttcttcttttgggtttcttaacatgtgctcttaagatacaagttagcactaccc 30732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 41519628 - 41519470
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||||| || | |||| ||||| ||||||||||  || | ||| ||||||||||||||| ||||||| |||| |||||||||| ||||||  |||    
T  41519628 caagttaatgattcgaatatagaaataatttattgaaaaatgtgcattgcatttaatctttaattttttaatcaattaaatgcacaaagttttaggaaat 41519529  T
Q  197 att--ttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccca 253  Q
    |||  || ||||||  |||| ||||||||||| ||||| ||||||||||||||||||||    
T  41519528 atttcttctcttttaagtttattaacatgtgccctaagagcacaagttaacactaccca 41519470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 20796416 - 20796553
Alignment:
Q  116 taaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttc 215  Q
    |||||||  ||| ||| |||||| |||||  ||||||||| | |  ||||||| ||||||||||| |||| | |||||||||||| |||||||||| |||    
T  20796416 taaaaattattttttggaatgtgtgtattttatttaatctctcactttttaataaattgaatgcataaaagtctagagaatatttcttcttttggg-ttc 20796514  T
Q  216 ttaacatgtgctctaagggcac--aagttaacactaccc 252  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  20796515 ttaacatgtgctctaagggcacataagttaacactaccc 20796553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 101 - 252
Target Start/End: Original strand, 28554166 - 28554316
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattt 200  Q
    ||||||| |||| |||| ||||| |||||||||||||| |||||  ||||||| |||||  |||| || |||| |||||||||||||||| | |||||||    
T  28554166 ttaatgattcaaatatagaaataatttattgaaatgtgtgtattgtatttaat-tttaactttttgatcaattaaatgcacaaaattttaaaaaatattt 28554264  T
Q  201 tttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
     ||||||| |   ||||||||||||| || ||||||||| ||||||||||||    
T  28554265 cttcttttagaagtcttaacatgtgccctgagggcacaaattaacactaccc 28554316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 232
Target Start/End: Original strand, 42760399 - 42760524
Alignment:
Q  110 caattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttt-- 207  Q
    ||||| || ||||| | ||||| |||||| | |||| |||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||      
T  42760399 caattgtataaatagtgtattggaatgtgtgcattaaatttaatctttaatgttttaatgaattgaatgcacaaagtttaagagaatatttttttttttt 42760498  T
Q  208 -tgggtttcttaacatgtgctctaag 232  Q
     ||| |||||||||||| || |||||    
T  42760499 atggatttcttaacatgcgccctaag 42760524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 37311728 - 37311818
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacccataaaaaa 260  Q
    |||||||||||||||||   ||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||||  |||| |||||||    
T  37311728 aattgaatgcacaaaatacaagagaatgtttctacttttgggttgcttaacatgtgctctaagggcacaagttaacataacccttaaaaaa 37311818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 32733665 - 32733749
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgc 226  Q
    |||| |||||||| ||||| ||||||||||||||||||||||| ||| ||| ||||||| || |||||| |||||||||||||||    
T  32733665 attaaatttaatcgttaatgttttaatgaattgaatgcacaaagtttaagaaaatatttctttttttggatttcttaacatgtgc 32733749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 49447685 - 49447561
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattt 200  Q
    ||||||| |||| ||||||||||  |||||| |||||| | |||  ||||| |||||||  ||| |||| ||||||| ||||| |||||| |||| ||||    
T  49447685 ttaatgattcaaatataaaaataaattattggaatgtgtgcattttatttagtctttaacttttaaatgcattgaatacacaatattttaaagaacattt 49447586  T
Q  201 tttcttttgggtttcttaacatgtg 225  Q
    ||||||||| |||||||||||||||    
T  49447585 tttcttttgagtttcttaacatgtg 49447561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 12931593 - 12931501
Alignment:
Q  98 aagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttaga 192  Q
    ||||||||||||||| |||| ||||| ||||||| |||||| |||||||||||||| |||||| |||||||||||| ||| | ||||||||||||    
T  12931593 aagttaatgaatcaaatatataaatagtttattggaatgtgtgtattacatttaat-tttaat-ttttaatgaattaaatactcaaaattttaga 12931501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 46750209 - 46750135
Alignment:
Q  182 aaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactacccataaa 257  Q
    ||||||||||||||||||| || ||||  |||||||||||||||| ||||| |||||||||| |||||||| ||||    
T  46750209 aaaattttagagaatatttctt-ttttaagtttcttaacatgtgccctaagagcacaagttatcactacccttaaa 46750135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 54465388 - 54465304
Alignment:
Q  162 ttttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||| ||||||||| | ||||||||||||||  ||| |||||||  |||| ||||||| | ||||| |||||||||||||||    
T  54465388 ttttaattaattgaatgtataaaattttagagaaagtttcttcttttaagtttattaacatatactctatgggcacaagttaaca 54465304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 39990828 - 39990755
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatga 170  Q
    ||||||||||||||||  || |||||| |||||||||||||| | |||||||||||| || ||  |||||||||    
T  39990828 caagttaatgaatcaaagatgaaaataatttattgaaatgtgtgaattacatttaatattaaactttttaatga 39990755  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 49230124 - 49230046
Alignment:
Q  100 gttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgca 180  Q
    ||||||||||||| ||||||||   | |||||||||||| |||||| ||||||||||| |  |||||| ||||||||||||    
T  49230124 gttaatgaatcaaatataaaaaa--tatattgaaatgtgtgtattatatttaatcttttactttttaaagaattgaatgca 49230046  T

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Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 45054724 - 45054800
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||||| ||||||||  || |||| ||| | |||||| ||| |||||||||||| || ||||||||||||||||    
T  45054724 aattgaatgtacaaaattcaagggaatgtttctacttttgagttgcttaacatgtgcccttagggcacaagttaaca 45054800  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 54362104 - 54362187
Alignment:
Q  160 tattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    ||||||||| ||||||||||||||||||| |||   | ||| | ||||| |||| |||||  ||||| ||||||||||||||||    
T  54362104 tattttaattaattgaatgcacaaaatttaagaatttttttatacttttaggttgcttaatgtgtgccctaagggcacaagtta 54362187  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 12568747 - 12568780
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||||||||||| |||||||||||||||||||    
T  12568747 ttcttaacatgtgccctaagggcacaagttaaca 12568780  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 13545211 - 13545244
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||||||||||| |||||||||||||||||||    
T  13545211 ttcttaacatgtgccctaagggcacaagttaaca 13545244  T

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Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 28451856 - 28451889
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||||||||||| |||||||||||||||||||    
T  28451856 ttcttaacatgtgccctaagggcacaagttaaca 28451889  T

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Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 37238796 - 37238747
Alignment:
Q  215 cttaacatgtgctctaagggcacaagttaacactacccataaaaaattta 264  Q
    |||||||||||| |||||||||||||||||||  |||| ||||| |||||    
T  37238796 cttaacatgtgccctaagggcacaagttaacatgacccttaaaatattta 37238747  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 50129171 - 50129215
Alignment:
Q  211 gtttcttaacatgtgctctaagggcacaagttaacactacccata 255  Q
    |||||||||| ||||| |||||||||||||||||||  |||||||    
T  50129171 gtttcttaacttgtgccctaagggcacaagttaacatgacccata 50129215  T

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Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 53684023 - 53684099
Alignment:
Q  170 aattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagttaaca 246  Q
    |||||||| |||||||| | ||||||||||| | ||||||  || |||||||||||   | ||||||||||||||||    
T  53684023 aattgaatacacaaaatataagagaatatttctacttttgaattgcttaacatgtgtcttcagggcacaagttaaca 53684099  T

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Target: scaffold0047 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 66143 - 66306
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    |||||||||||||||| | ||  |||||||||||| |||    | |||||||||||| |||||  ||||| |||||||||||||||||||||||||||||    
T  66143 caagttaatgaatcaaatgtaggaatattttattggaattcatgcattacatttaatttttaactttttagtgaattgaatgcacaaaattttagagaat 66242  T
Q  197 attttttctttt-----gggtttcttaacatgtgctctaagggcacaagttaacactacccataa 256  Q
    |||| |||||||     || |||||||||||||| || ||||||| |||||||||||||||||||    
T  66243 atttcttcttttaatttggatttcttaacatgtg-tccaagggcataagttaacactacccataa 66306  T

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Target: scaffold0006 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 50712 - 50593
Alignment:
Q  119 aaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttctta 218  Q
    ||||| ||||||| |||||| | |||  ||||||||| |||  ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  50712 aaataatttattggaatgtgtgcattgtatttaatctctaagtttttaatcaattaaatgcacaaaattttagagaatatttcttcttttgggtttctta 50613  T
Q  219 acatgtgctctaagggcaca 238  Q
    ||||||||  ||||||||||    
T  50612 acatgtgccttaagggcaca 50593  T

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Target: scaffold0050 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 252
Target Start/End: Original strand, 37198 - 37350
Alignment:
Q  98 aagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaata 197  Q
    |||||| ||||||||  ||| |||||  |||||| |||||| | |||||||||||| |||||  |||||| |||||||||||||||||||||| | ||||    
T  37198 aagttactgaatcaaaaatagaaataggttattggaatgtgtgcattacatttaat-tttaactttttaaagaattgaatgcacaaaattttaaa-aata 37295  T
Q  198 ttttttcttttgggtttcttaacatgtgctctaagggcacaagttaacactaccc 252  Q
    ||| ||||||| ||||| ||||||||||| ||||| ||||||| |||||||||||    
T  37296 tttcttcttttaggttttttaacatgtgccctaagagcacaagataacactaccc 37350  T

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Target: scaffold0005 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 223678 - 223813
Alignment:
Q  126 ttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtg 225  Q
    |||||| |||||| ||||| |||| ||| |||||  ||||||| |||| |||||| ||||||||| | ||||||| ||||||| | ||| |||| ||| |    
T  223678 ttattgcaatgtgtgtattgcattaaatgtttaaatttttaatcaattaaatgcataaaattttaaaaaatatttcttcttttagattttttaatatggg 223777  T
Q  226 ctctaagggcacaagttaacactacccataaaaaat 261  Q
    | |||| |||| |||||||||||||| || ||||||    
T  223778 ccctaacggcataagttaacactacctatgaaaaat 223813  T

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Target: scaffold0329 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 97 - 231
Target Start/End: Original strand, 8194 - 8328
Alignment:
Q  97 caagttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaat 196  Q
    ||||||||| |||||| ||||  ||  |||||||| |||||  | |||| ||||||| ||| |  || |||| |||||||||||||||| |||||| ||     
T  8194 caagttaattaatcaaatatagtaactttttattggaatgtatgcattaaatttaatttttgaagttgtaataaattgaatgcacaaaactttagaaaac 8293  T
Q  197 attttttcttttgggtttcttaacatgtgctctaa 231  Q
    |||||| ||||||||||||||| ||||||| ||||    
T  8294 atttttacttttgggtttcttatcatgtgccctaa 8328  T

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Target: scaffold0250 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 9117 - 9039
Alignment:
Q  165 taatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaacatgtgctctaagggcacaagtta 243  Q
    |||| |||| |||| |||||| || ||||||||||||| |||||  ||||||||||||||||||||| | |||||||||    
T  9117 taataaattaaatgtacaaaacttgagagaatatttttacttttttgtttcttaacatgtgctctaaagacacaagtta 9039  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 16852 - 16958
Alignment:
Q  120 aatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttttcttttgggtttcttaa 219  Q
    |||| |||||| ||||||| | ||| |||||||| |||||  ||||||| | || |||||| ||||||| | | ||||||| ||||||| | ||||||||    
T  16852 aataatttattcaaatgtgtgcattgcatttaatatttaactttttaatcatttaaatgcataaaatttcaaaaaatatttattcttttagatttcttaa 16951  T
Q  220 catgtgc 226  Q
    |||||||    
T  16952 catgtgc 16958  T

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Target: scaffold0339 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 7244 - 7184
Alignment:
Q  142 attacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattttt 202  Q
    |||| ||||||| |||||| |||| |||||||| ||||||||||||||||| ||| |||||    
T  7244 attaaatttaatgtttaatgtttttatgaattggatgcacaaaattttagaaaatgttttt 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 36471 - 36504
Alignment:
Q  213 ttcttaacatgtgctctaagggcacaagttaaca 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  36471 ttcttaacatgtgctttaagggcacaagttaaca 36504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 247712 - 247611
Alignment:
Q  101 ttaatgaatcaattataaaaatattttattgaaatgtgcgtattacatttaatctttaatattttaatgaattgaatgcacaaaattttagagaatattt 200  Q
    |||||||||||| ||||  ||| |||| |||||||||| |||||  ||||||| ||| |  || |||| ||||||||  |||||| |||||| |||||||    
T  247712 ttaatgaatcaaatatagtaattttttgttgaaatgtgtgtatttaatttaatttttgaatttgtaataaattgaataaacaaaactttagaaaatattt 247613  T
Q  201 tt 202  Q
    ||    
T  247612 tt 247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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