View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16256_low_2 (Length: 579)

Name: NF16256_low_2
Description: NF16256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16256_low_2
NF16256_low_2
[»] chr5 (38 HSPs)
chr5 (383-565)||(36755839-36756021)
chr5 (23-177)||(36756013-36756167)
chr5 (177-382)||(18625377-18625580)
chr5 (176-382)||(35660565-35660769)
chr5 (176-384)||(37266646-37266852)
chr5 (185-382)||(32129573-32129768)
chr5 (176-383)||(13032034-13032238)
chr5 (178-379)||(11775709-11775909)
chr5 (183-382)||(39902337-39902534)
chr5 (176-365)||(4895708-4895895)
chr5 (177-384)||(14349720-14349924)
chr5 (185-384)||(40753116-40753313)
chr5 (23-152)||(36748700-36748832)
chr5 (186-310)||(4592726-4592849)
chr5 (185-366)||(8440943-8441122)
chr5 (185-382)||(34827118-34827311)
chr5 (23-148)||(36767170-36767298)
chr5 (185-288)||(1475686-1475789)
chr5 (466-565)||(36756226-36756325)
chr5 (466-565)||(36748891-36748999)
chr5 (183-309)||(3057338-3057464)
chr5 (212-304)||(28142807-28142901)
chr5 (211-377)||(32793324-32793487)
chr5 (183-310)||(3057180-3057307)
chr5 (183-302)||(10173870-10173985)
chr5 (511-565)||(36767357-36767411)
chr5 (211-380)||(43309068-43309225)
chr5 (254-306)||(3041338-3041390)
chr5 (269-382)||(29341003-29341113)
chr5 (211-297)||(14688524-14688610)
chr5 (183-236)||(4348120-4348173)
chr5 (186-306)||(36290537-36290647)
chr5 (184-246)||(23253716-23253778)
chr5 (254-299)||(2984427-2984472)
chr5 (386-439)||(36748608-36748661)
chr5 (386-439)||(36767050-36767103)
chr5 (183-240)||(38283711-38283768)
chr5 (269-306)||(40162737-40162774)
[»] chr8 (25 HSPs)
chr8 (178-384)||(28069636-28069840)
chr8 (185-382)||(30426625-30426820)
chr8 (185-382)||(36991280-36991475)
chr8 (185-382)||(40695204-40695398)
chr8 (178-383)||(10652572-10652776)
chr8 (185-359)||(41511186-41511358)
chr8 (185-310)||(24101940-24102065)
chr8 (189-379)||(44859128-44859314)
chr8 (186-382)||(10672470-10672662)
chr8 (190-309)||(28318929-28319048)
chr8 (177-382)||(45113186-45113390)
chr8 (185-287)||(12177613-12177715)
chr8 (185-287)||(12422041-12422143)
chr8 (186-301)||(8412179-8412294)
chr8 (183-304)||(27490038-27490159)
chr8 (321-383)||(5033310-5033372)
chr8 (178-246)||(5033023-5033091)
chr8 (212-302)||(36748525-36748611)
chr8 (195-383)||(37966399-37966583)
chr8 (258-303)||(26749581-26749626)
chr8 (258-306)||(1937185-1937233)
chr8 (186-306)||(34612498-34612609)
chr8 (211-245)||(21492733-21492767)
chr8 (269-306)||(17867690-17867727)
chr8 (180-240)||(21486584-21486644)
[»] chr2 (23 HSPs)
chr2 (176-379)||(13238596-13238797)
chr2 (178-382)||(28564808-28565011)
chr2 (185-382)||(35316749-35316944)
chr2 (211-384)||(23259441-23259612)
chr2 (179-287)||(39465693-39465801)
chr2 (178-275)||(41983401-41983497)
chr2 (183-266)||(2061299-2061382)
chr2 (319-382)||(45625035-45625098)
chr2 (183-275)||(374499-374591)
chr2 (199-287)||(45625111-45625199)
chr2 (319-382)||(11864925-11864988)
chr2 (189-243)||(42075456-42075510)
chr2 (185-282)||(10877626-10877724)
chr2 (183-286)||(12949392-12949494)
chr2 (177-301)||(8988782-8988895)
chr2 (217-303)||(30709065-30709152)
chr2 (177-306)||(374919-375038)
chr2 (186-306)||(29188588-29188698)
chr2 (248-310)||(21454520-21454582)
chr2 (269-306)||(13780506-13780543)
chr2 (186-302)||(23459880-23459986)
chr2 (269-306)||(40254180-40254217)
chr2 (324-376)||(40640731-40640783)
[»] chr1 (34 HSPs)
chr1 (179-386)||(50294015-50294220)
chr1 (178-384)||(48327108-48327312)
chr1 (178-382)||(50484303-50484505)
chr1 (178-382)||(12151684-12151886)
chr1 (185-310)||(12380936-12381061)
chr1 (185-310)||(12385003-12385128)
chr1 (178-378)||(40328193-40328390)
chr1 (186-382)||(23861908-23862106)
chr1 (185-287)||(45977946-45978048)
chr1 (189-283)||(7841763-7841857)
chr1 (204-310)||(24977183-24977289)
chr1 (319-383)||(12380832-12380896)
chr1 (319-383)||(12384899-12384963)
chr1 (186-382)||(18976260-18976452)
chr1 (183-304)||(46608409-46608525)
chr1 (183-284)||(2845187-2845289)
chr1 (183-299)||(5047418-5047533)
chr1 (276-382)||(7840635-7840739)
chr1 (183-257)||(1609617-1609691)
chr1 (211-304)||(32887812-32887905)
chr1 (322-382)||(45978064-45978124)
chr1 (217-368)||(39426166-39426315)
chr1 (176-245)||(680101-680170)
chr1 (186-299)||(23916013-23916124)
chr1 (211-309)||(44483718-44483815)
chr1 (258-306)||(52280069-52280117)
chr1 (212-299)||(7844939-7845026)
chr1 (189-267)||(40988643-40988721)
chr1 (269-306)||(6948862-6948899)
chr1 (183-293)||(19910469-19910583)
chr1 (208-308)||(24413310-24413400)
chr1 (176-245)||(30077725-30077794)
chr1 (219-276)||(45970804-45970861)
chr1 (211-275)||(42720819-42720882)
[»] chr7 (35 HSPs)
chr7 (176-382)||(9559010-9559213)
chr7 (181-384)||(4888387-4888588)
chr7 (189-382)||(21151080-21151271)
chr7 (185-383)||(16366442-16366638)
chr7 (185-383)||(18198180-18198376)
chr7 (187-381)||(45260384-45260576)
chr7 (190-382)||(7362497-7362686)
chr7 (185-379)||(47226035-47226224)
chr7 (185-383)||(12139252-12139447)
chr7 (185-384)||(44647889-44648085)
chr7 (185-310)||(25084754-25084879)
chr7 (177-384)||(33450422-33450628)
chr7 (186-383)||(47500237-47500433)
chr7 (183-310)||(29630970-29631097)
chr7 (186-358)||(34985925-34986095)
chr7 (183-304)||(32915881-32915999)
chr7 (236-309)||(39855840-39855913)
chr7 (208-292)||(40019628-40019712)
chr7 (213-293)||(30153225-30153305)
chr7 (319-379)||(47271107-47271166)
chr7 (217-310)||(46802357-46802448)
chr7 (258-303)||(47799933-47799978)
chr7 (177-304)||(19889066-19889183)
chr7 (258-302)||(30588532-30588576)
chr7 (186-304)||(32916104-32916212)
chr7 (190-303)||(47080360-47080470)
chr7 (254-300)||(11828945-11828991)
chr7 (269-307)||(19027713-19027751)
chr7 (269-307)||(20726885-20726923)
chr7 (269-306)||(4269187-4269224)
chr7 (204-245)||(6568419-6568460)
chr7 (269-306)||(14696788-14696825)
chr7 (269-306)||(30102501-30102538)
chr7 (185-245)||(6882149-6882209)
chr7 (185-245)||(25331767-25331827)
[»] chr6 (27 HSPs)
chr6 (185-383)||(4804372-4804568)
chr6 (178-381)||(1249105-1249304)
chr6 (178-379)||(27826455-27826654)
chr6 (185-382)||(7162008-7162203)
chr6 (185-384)||(21159323-21159516)
chr6 (201-383)||(17944102-17944282)
chr6 (211-382)||(12412587-12412756)
chr6 (185-310)||(29698087-29698212)
chr6 (236-382)||(13089705-13089849)
chr6 (185-287)||(32737798-32737900)
chr6 (186-379)||(227522-227714)
chr6 (211-299)||(30460770-30460858)
chr6 (319-382)||(32737913-32737976)
chr6 (217-384)||(2800565-2800730)
chr6 (212-257)||(17398773-17398818)
chr6 (211-287)||(1516238-1516314)
chr6 (211-287)||(1518327-1518403)
chr6 (258-306)||(24484876-24484924)
chr6 (325-382)||(1516163-1516219)
chr6 (325-382)||(1518252-1518308)
chr6 (254-299)||(2720366-2720411)
chr6 (269-374)||(7215816-7215919)
chr6 (325-382)||(1515498-1515554)
chr6 (269-306)||(7098226-7098263)
chr6 (211-304)||(17275921-17276014)
chr6 (320-368)||(28696626-28696673)
chr6 (254-306)||(32254061-32254113)
[»] chr4 (44 HSPs)
chr4 (178-382)||(19901874-19902076)
chr4 (178-382)||(24073534-24073735)
chr4 (185-383)||(56558203-56558399)
chr4 (186-381)||(34778346-34778539)
chr4 (185-383)||(5763117-5763313)
chr4 (185-382)||(33247086-33247279)
chr4 (178-382)||(23610559-23610761)
chr4 (197-382)||(3952126-3952309)
chr4 (185-382)||(18206996-18207191)
chr4 (186-382)||(5416422-5416617)
chr4 (183-383)||(38079675-38079873)
chr4 (185-304)||(12241440-12241559)
chr4 (189-382)||(33262508-33262699)
chr4 (185-382)||(39862441-39862636)
chr4 (185-287)||(12153095-12153197)
chr4 (228-368)||(30567868-30568006)
chr4 (240-382)||(12312431-12312572)
chr4 (185-310)||(47922101-47922226)
chr4 (185-273)||(52018707-52018795)
chr4 (177-377)||(47922327-47922526)
chr4 (186-310)||(31862246-31862370)
chr4 (185-279)||(17080697-17080791)
chr4 (319-382)||(12153210-12153273)
chr4 (189-267)||(12312572-12312650)
chr4 (322-382)||(33524321-33524381)
chr4 (183-310)||(25442200-25442328)
chr4 (322-382)||(52018822-52018882)
chr4 (186-306)||(56269106-56269217)
chr4 (220-375)||(1871237-1871388)
chr4 (176-306)||(5524372-5524492)
chr4 (212-384)||(23474062-23474231)
chr4 (211-286)||(33841854-33841929)
chr4 (186-306)||(37002281-37002391)
chr4 (258-306)||(48084555-48084603)
chr4 (220-278)||(43447638-43447697)
chr4 (183-303)||(3326438-3326559)
chr4 (269-306)||(25219003-25219040)
chr4 (269-306)||(32146510-32146547)
chr4 (269-306)||(46238974-46239011)
chr4 (269-306)||(53526096-53526133)
chr4 (269-306)||(55160401-55160438)
chr4 (264-300)||(36688224-36688260)
chr4 (258-302)||(42010114-42010158)
chr4 (270-306)||(56453850-56453886)
[»] scaffold0012 (1 HSPs)
scaffold0012 (185-383)||(207987-208183)
[»] chr3 (26 HSPs)
chr3 (185-382)||(43719903-43720098)
chr3 (178-382)||(19830387-19830591)
chr3 (176-382)||(2229898-2230102)
chr3 (201-382)||(27033591-27033770)
chr3 (185-382)||(34373755-34373950)
chr3 (185-380)||(40851697-40851891)
chr3 (190-364)||(34373559-34373731)
chr3 (190-379)||(46167322-46167509)
chr3 (186-382)||(48084744-48084939)
chr3 (183-310)||(550842-550969)
chr3 (277-382)||(24754673-24754776)
chr3 (277-382)||(24763670-24763773)
chr3 (189-310)||(12402893-12403015)
chr3 (188-366)||(566746-566925)
chr3 (186-310)||(40810382-40810505)
chr3 (183-283)||(52859433-52859534)
chr3 (177-306)||(31523698-31523817)
chr3 (186-306)||(42613015-42613125)
chr3 (183-282)||(2310233-2310330)
chr3 (330-382)||(24647905-24647957)
chr3 (183-245)||(3009171-3009233)
chr3 (183-238)||(566988-567043)
chr3 (211-258)||(32577482-32577528)
chr3 (184-246)||(20485808-20485870)
chr3 (183-245)||(49289042-49289104)
chr3 (177-302)||(49679304-49679419)
[»] scaffold0008 (1 HSPs)
scaffold0008 (180-382)||(9157-9354)
[»] scaffold0035 (1 HSPs)
scaffold0035 (185-384)||(16351-16548)
[»] scaffold0250 (1 HSPs)
scaffold0250 (185-382)||(7071-7270)
[»] scaffold0006 (2 HSPs)
scaffold0006 (189-287)||(73889-73987)
scaffold0006 (321-378)||(73817-73874)
[»] scaffold0456 (2 HSPs)
scaffold0456 (211-287)||(13646-13722)
scaffold0456 (320-382)||(13737-13799)
[»] scaffold0126 (1 HSPs)
scaffold0126 (183-310)||(22468-22595)
[»] scaffold0009 (1 HSPs)
scaffold0009 (212-310)||(6461-6559)
[»] scaffold0171 (1 HSPs)
scaffold0171 (176-303)||(17339-17456)
[»] scaffold0664 (1 HSPs)
scaffold0664 (269-306)||(4731-4768)
[»] scaffold0468 (1 HSPs)
scaffold0468 (211-283)||(5560-5632)


Alignment Details
Target: chr5 (Bit Score: 159; Significance: 2e-84; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 383 - 565
Target Start/End: Complemental strand, 36756021 - 36755839
Alignment:
Q  383 caccatcaccgctaccaccgatctcagtagagtatgatgtccacatatcatccatgcacaaaagatacagttgatgcacctgaaacccagtgattatctt 482  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  36756021 caccatcaccgctaccaccgatctcagtaaaatatgatgtccacatatcatcgatgcacaaaaggtacagttgatgcacctgaaacccagtgattatctt 36755922  T
Q  483 cttcgatcagtaatttgacattattctaggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 565  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36755921 cttcgatcagtaatttgacattactcttggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 36755839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 23 - 177
Target Start/End: Complemental strand, 36756167 - 36756013
Alignment:
Q  23 ccttttcaatatcgctaaacttttgtccaatgacacgaagaaagttcgtacgaatgcaatccaccaggctggtttggagtgccgtttcaaatcccaattc 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36756167 ccttttcaatatcgctaaacttttgtccaatgacacgaagaaagttcgtacgaatgcaatccaccaggctggtttggagtgccgtttcaaatcccaattc 36756068  T
Q  123 cttaactttttcatgattcttctccatacccagattaatggggcatcaccatcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36756067 cttaactttttcatgattcttctccatacccagattaatggggcatcaccatcac 36756013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 177 - 382
Target Start/End: Complemental strand, 18625580 - 18625377
Alignment:
Q  177 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 276  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  18625580 cgggtgaagatcctctccatttatgtgtttttcaatttctttcatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatg 18625481  T
Q  277 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 376  Q
    ||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18625480 gtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatct 18625383  T
Q  377 tcaccc 382  Q
    ||||||    
T  18625382 tcaccc 18625377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 176 - 382
Target Start/End: Complemental strand, 35660769 - 35660565
Alignment:
Q  176 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    |||||| ||||||||||| |||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  35660769 acgggttaagatcctctctatttatgtgtttctccgtttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgat 35660670  T
Q  276 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 375  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  35660669 ggtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 35660572  T
Q  376 ttcaccc 382  Q
    |||||||    
T  35660571 ttcaccc 35660565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 176 - 384
Target Start/End: Original strand, 37266646 - 37266852
Alignment:
Q  176 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    |||||| | ||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  37266646 acgggttaggatcctctccatttacgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaactaaaatataattaatgat 37266745  T
Q  276 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 375  Q
    ||||||||||||||||||||| |||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  37266746 ggtgggacccacttagtggtatgacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 37266843  T
Q  376 ttcacccca 384  Q
    |||||||||    
T  37266844 ttcacccca 37266852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 185 - 382
Target Start/End: Complemental strand, 32129768 - 32129573
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  32129768 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 32129669  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  32129668 cacttagtggtaggacccaccatcta--tttttggtgtctatctctctccaacttataaaactccatttattttgccaaatggagaggatcttcaccc 32129573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 176 - 383
Target Start/End: Original strand, 13032034 - 13032238
Alignment:
Q  176 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    |||||| | |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || |||||||||||||| |||||||    
T  13032034 acgggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatctt-aaaaaaataaaatataattaatgat 13032132  T
Q  276 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 375  Q
    ||||||||||| ||||||||||||| |||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  13032133 ggtgggacccatttagtggtaggactcaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 13032230  T
Q  376 ttcacccc 383  Q
    ||||||||    
T  13032231 ttcacccc 13032238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 178 - 379
Target Start/End: Original strand, 11775709 - 11775909
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatg 276  Q
    |||| |||||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||| |    
T  11775709 gggttaagatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaaagtaaaatataattaatgacg 11775808  T
Q  277 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 376  Q
    ||||||||||||||||||||||| ||||||||||        |||||||||||||||||||||| ||| ||||||||||||| ||||||||| |||||||    
T  11775809 gtgggacccacttagtggtaggatccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatct 11775906  T
Q  377 tca 379  Q
    |||    
T  11775907 tca 11775909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 183 - 382
Target Start/End: Original strand, 39902337 - 39902534
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||||||| |    
T  39902337 aagatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaa 39902436  T
Q  283 cccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
     ||| |||||||||||||||||||||||        |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||| ||||||||    
T  39902437 tccatttagtggtaggacccaccatcta--tttcttgtgtttatctctctccaacttgtaaaactccatttattttgtcaaatggagaggaacttcaccc 39902534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 176 - 365
Target Start/End: Complemental strand, 4895895 - 4895708
Alignment:
Q  176 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    |||||| | |||||||| ||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  4895895 acgggttaggatcctcttcatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgat 4895796  T
Q  276 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaat 365  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  4895795 ggtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 4895708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 177 - 384
Target Start/End: Original strand, 14349720 - 14349924
Alignment:
Q  177 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 276  Q
    ||||| |||||| ||||||||||||||||| || |||||||  ||||||| ||||||||||||||||| ||||||| ||| |||||||||| ||||||||    
T  14349720 cgggttaagatcttctccatttatgtgtttctccatttctttaatttggaaagataaagacacataaa-tcttgaaaaaagtaaaatataattaatgatg 14349818  T
Q  277 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 376  Q
    ||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||  ||| ||||||||||||| |||||| || |||||||    
T  14349819 gtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctgtctctctccaacttacaaaactccatttattttaccaaatagagaggatct 14349916  T
Q  377 tcacccca 384  Q
    ||||||||    
T  14349917 tcacccca 14349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 185 - 384
Target Start/End: Complemental strand, 40753313 - 40753116
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    ||||||||||||||||||| || || |||||||  |||||||||||||||  |||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  40753313 gatcctctccatttatgtgcttctccatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 40753214  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 384  Q
    ||||||||||||||||||||||| ||        |||||||||| ||||||||||| ||| ||  |||||||||||||||| || |||||||||||||||    
T  40753213 cacttagtggtaggacccaccatata--ttttttgtgtctatctttctccaacttgcaaaactttatttattttgccaaatagagaggatcttcacccca 40753116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 36748832 - 36748700
Alignment:
Q  23 ccttttcaatatcgctaaacttttgtccaatgacacgaagaa---agttcgtacgaatgcaatccaccaggctggtttggagtgccgtttcaaatcccaa 119  Q
    ||||||||||||||||||||||||| ||||||||||||||||   ||||| || || |||  |||||||| |||||||||||||||||||||||||||||    
T  36748832 ccttttcaatatcgctaaacttttgcccaatgacacgaagaagaaagttcttatgagtgctgtccaccagactggtttggagtgccgtttcaaatcccaa 36748733  T
Q  120 ttccttaactttttcatgattcttctccatacc 152  Q
    |||||||||||||||||||| ||||||||||||    
T  36748732 ttccttaactttttcatgatacttctccatacc 36748700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 186 - 310
Target Start/End: Original strand, 4592726 - 4592849
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||  ||||||||||| ||||| ||| |||||||||| |||||||||||||||||    
T  4592726 atcctctccatttatgtgtttctccatttcttcaatttggagagataat-acacataaaatattgaaaaaagtaaaatataattaatgatggtgggaccc 4592824  T
Q  286 acttagtggtaggacccaccatcta 310  Q
    ||||||||||| |||||||||||||    
T  4592825 acttagtggtaagacccaccatcta 4592849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 366
Target Start/End: Complemental strand, 8441122 - 8440943
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||| ||||||||||||||||| ||  |||| || ||||||||||||||| ||||||| |||||| || ||| |||||||||| |||||||||||||||     
T  8441122 gatcatctccatttatgtgtttctccgtttcatcaatttggagagataaatacacatacaatcttaaaaaaagtaaaatataattaatgatggtgggaca 8441023  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatg 366  Q
    |||||||||||| | | |||||||||        ||||||||||  |||||||||| ||| |||||||||||||||||||||    
T  8441022 cacttagtggtatgtcgcaccatcta--tttttggtgtctatctacctccaacttgcaaaactccatttattttgccaaatg 8440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 185 - 382
Target Start/End: Original strand, 34827118 - 34827311
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggac 283  Q
    ||||||| |||||||| ||||| || |||||||  ||||| |||||||||||||||  |||| ||||| |||| |||||||||| ||| |||||||||||    
T  34827118 gatcctcaccatttatatgttt-tccatttcttaaatttgaagagataaagacaca--aaattttgaaaaaaagtaaaatataattaaagatggtgggac 34827214  T
Q  284 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    |||||||||||||||| ||||||||||         ||||||||||||||||||||| | | ||||||||||||||| ||||||| | |||||||||||    
T  34827215 ccacttagtggtaggatccaccatctattttttt--tgtctatctctctccaacttgcataactccatttattttgctaaatggagatgatcttcaccc 34827311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 36767298 - 36767170
Alignment:
Q  23 ccttttcaatatcgctaaacttttgtccaatgacacgaagaa---agttcgtacgaatgcaatccaccaggctggtttggagtgccgtttcaaatcccaa 119  Q
    ||||||||||||||||||||||||  ||||||||||||||||   || || | |||||||||||| |||||||||||||||||||| |||||||||||||    
T  36767298 ccttttcaatatcgctaaactttttcccaatgacacgaagaagaaaggtcattcgaatgcaatcctccaggctggtttggagtgccttttcaaatcccaa 36767199  T
Q  120 ttccttaactttttcatgattcttctcca 148  Q
     ||||| ||||||||||||| ||| ||||    
T  36767198 ctcctttactttttcatgatacttttcca 36767170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 185 - 288
Target Start/End: Complemental strand, 1475789 - 1475686
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||| ||||||||||||| |  |||||||| |||||||| |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  1475789 gatcctcttcatttatgtgttttttcatttcttcaatttggagtgataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 1475690  T
Q  285 cact 288  Q
    ||||    
T  1475689 cact 1475686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 466 - 565
Target Start/End: Complemental strand, 36756325 - 36756226
Alignment:
Q  466 aacccagtgattatcttcttcgatcagtaatttgacattattctaggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 565  Q
    ||||| ||||||||||| || ||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  36756325 aacccggtgattatcttatttgatcagtaatttgacattactcttgcaattttctacgcttaattcgttcaaagttttctttaatttatcccattcatct 36756226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 466 - 565
Target Start/End: Complemental strand, 36748999 - 36748891
Alignment:
Q  466 aacccagtgattatcttcttcgatcagtaatttgacattattctaggaattttc---------tacgcttaattcgtccaaagttttctttaatttatcc 556  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||| ||||         |||| ||||||||||||||||||||||||||||||||    
T  36748999 aacccagtgattatcttctttgatctgtaatttgacattactcttggaactttctacgtttaatacgtttaattcgtccaaagttttctttaatttatcc 36748900  T
Q  557 cgttcatct 565  Q
    | |||||||    
T  36748899 cattcatct 36748891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 3057338 - 3057464
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    |||||| ||||||||||||| | | ||| |||||||||||| |||||||||||||||| ||||  ||||| ||| || || |||| |||||||| ||| |    
T  3057338 aagatcatctccatttatgtttctctcactttcttccattttgagagataaagacacaaaaaagtttgaaaaaagtataaaataattaatgatgatggaa 3057437  T
Q  283 cccacttagtggtaggacccaccatct 309  Q
    | ||||| ||||||||| ||| |||||    
T  3057438 ctcactttgtggtaggatccatcatct 3057464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 28142901 - 28142807
Alignment:
Q  212 tttcttccatttggagagataaagacacataaaa-tcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggacccac 304  Q
    ||||||||||||||| ||  |||||||||||||| ||||||| |||| |||||||||| ||||||||||||||| |||||| |||||||| ||||    
T  28142901 tttcttccatttggaaaggcaaagacacataaaaatcttgaaaaaaagtaaaatataattaatgatggtgggactcacttaatggtaggatccac 28142807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 211 - 377
Target Start/End: Original strand, 32793324 - 32793487
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 310  Q
    ||||||| |||||| ||||||||||||  ||||||||||||| ||| |||||||||| | ||||| |||||||| ||||||| ||| ||  || ||||||    
T  32793324 atttctttcatttgaagagataaagacgaataaaatcttgaaaaaagtaaaatataattgatgattgtgggacctacttagtagtaagaatcatcatcta 32793423  T
Q  311 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 377  Q
            |||| |||||||||| || ||||||| ||||||||||||||| |||| || ||||||||    
T  32793424 --ttttttgtgtatatctctctctaaattgtaaa-ctccatttattttgctaaatagataggatctt 32793487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 183 - 310
Target Start/End: Complemental strand, 3057307 - 3057180
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    |||||| |||||| |||||| | | || |||||||| ||||| |||||||||||||| |||| | || || ||| |||||||||| |||||||  || ||    
T  3057307 aagatcttctccaattatgtctctctccatttcttctatttgaagagataaagacacttaaattttttaaaaaagtaaaatataattaatgattatgtga 3057208  T
Q  283 cccacttagtggtaggacccaccatcta 310  Q
    | |||||| |||||||| ||||||||||    
T  3057207 ctcacttaatggtaggatccaccatcta 3057180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 10173870 - 10173985
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    ||||||||||||||||||||  || || ||||| | |||||||||||||||||||||    ||| ||||| ||| ||||| |||| |||||||||| | |    
T  10173870 aagatcctctccatttatgtccttctccatttccttcatttggagagataaagacac----aattttgaaaaaagtaaaaaataattaatgatggtagaa 10173965  T
Q  283 cccacttagtggtaggaccc 302  Q
    |||| |||||| ||||||||    
T  10173966 cccatttagtgataggaccc 10173985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 511 - 565
Target Start/End: Complemental strand, 36767411 - 36767357
Alignment:
Q  511 ggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 565  Q
    |||| |||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  36767411 ggaactttccacgcttaattcgtccaaagatttctttaaattatcccgttcatct 36767357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 211 - 380
Target Start/End: Original strand, 43309068 - 43309225
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 310  Q
    |||||||| ||||| ||||||||||||||||||||||||||| |||||          |||||||||||| ||||| ||| ||||| || |||| |||||    
T  43309068 atttcttcaatttgaagagataaagacacataaaatcttgaaaaaaat----------taatgatggtggaacccatttaatggtaagatccactatcta 43309157  T
Q  311 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcac 380  Q
             ||||||||||||||||||||| ||| |||||||||||||  |||||  | |||||||||||    
T  43309158 tttttta--tgtctatctctctccaacttgcaaaactccatttattttatcaaataaagaggatcttcac 43309225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 3041390 - 3041338
Alignment:
Q  254 aaaataaaatataactaatgatggtgggacccacttagtggtaggacccacca 306  Q
    ||||||||| |||| ||||||||||||||||| ||||||| ||||||||||||    
T  3041390 aaaataaaaaataattaatgatggtgggacccgcttagtgataggacccacca 3041338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 29341003 - 29341113
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatgga 368  Q
    |||||||||||||||||||||| | ||||||||||| |||||        |||||||||||||||||| ||| | | ||||||||||| | |||||||||    
T  29341003 taatgatggtgggacccacttaatagtaggacccactatcta--ttttctgtgtctatctctctccaaattgcata-ctccatttattataccaaatgga 29341099  T
Q  369 caggatcttcaccc 382  Q
     |||||||| ||||    
T  29341100 gaggatctttaccc 29341113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 14688524 - 14688610
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtag 297  Q
    |||||||||||||||||||||||||||| | ||||  || || ||| | ||| ||| ||||||||||||| | ||||||| ||||||    
T  14688524 atttcttccatttggagagataaagacatacaaaaatttaaaaaaagtcaaaaatatctaatgatggtggaatccacttaatggtag 14688610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 4348173 - 4348120
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaaga 236  Q
    ||||||||||| |||||||| ||| ||||||| || ||||||||||||||||||    
T  4348173 aagatcctctctatttatgtctttctcaatttgttacatttggagagataaaga 4348120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 186 - 306
Target Start/End: Original strand, 36290537 - 36290647
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||||||||||   ||| |  |||| |||||||| |||||||||||||||||||||          | ||||| |||| |||||||||||||| ||    
T  36290537 atcctctccatttataaattttttcatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggatcc 36290626  T
Q  286 acttagtggtaggacccacca 306  Q
    |||||||| ||||||||||||    
T  36290627 acttagtgataggacccacca 36290647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 23253716 - 23253778
Alignment:
Q  184 agatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaat 246  Q
    ||||||| ||||||||  | ||| || |||||| ||||||||||||||| |||||||||||||    
T  23253716 agatcctatccatttaaatttttctccatttctaccatttggagagatagagacacataaaat 23253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 2984472 - 2984427
Alignment:
Q  254 aaaataaaatataactaatgatggtgggacccacttagtggtagga 299  Q
    ||||||||| |||| |||||||||||||||||| |||||| |||||    
T  2984472 aaaataaaaaataattaatgatggtgggacccatttagtgatagga 2984427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 36748661 - 36748608
Alignment:
Q  386 catcaccgctaccaccgatctcagtagagtatgatgtccacatatcatccatgc 439  Q
    ||||||| || |||| |||||||||| |  ||||||||||||||||||||||||    
T  36748661 catcacctctcccactgatctcagtaaaaaatgatgtccacatatcatccatgc 36748608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 36767103 - 36767050
Alignment:
Q  386 catcaccgctaccaccgatctcagtagagtatgatgtccacatatcatccatgc 439  Q
    ||||||| || |||| |||||||||| |  ||||||||||||||||||||||||    
T  36767103 catcaccactgccactgatctcagtaaaaaatgatgtccacatatcatccatgc 36767050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 38283711 - 38283768
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacaca 240  Q
    |||||||||||||||||  | |||||| |||||| |||||| |||||||| |||||||    
T  38283711 aagatcctctccatttaaatttttatctatttctaccatttagagagatatagacaca 38283768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 40162737 - 40162774
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  40162737 taatgatggtgggatccacttagtgataggacccacca 40162774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 2e-81; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 178 - 384
Target Start/End: Original strand, 28069636 - 28069840
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 277  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  28069636 gggtgaagatcctctccatttatgtgtttttcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatgg 28069735  T
Q  278 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 377  Q
    |||||||||||||||||||||||||||||||||        |||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  28069736 tgggacccacttagtggtaggacccaccatcta--ttttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatctt 28069833  T
Q  378 cacccca 384  Q
    |||||||    
T  28069834 cacccca 28069840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 185 - 382
Target Start/End: Complemental strand, 30426820 - 30426625
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  30426820 gatcctctccatttatgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 30426721  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||| ||| | ||||||||||||||||||||| ||| |||||||||    
T  30426720 cacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagagggtcttcaccc 30426625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 185 - 382
Target Start/End: Original strand, 36991280 - 36991475
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||| ||||||||||||| || |||||||| |||||||||||||||||||| |||||||||||| ||| | |||||||| ||||||||||||||||    
T  36991280 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacgtaaaatcttgaaaaaagtcaaatataattaatgatggtgggacc 36991379  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||||||| ||||||         ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  36991380 cacttagtggtaggacccatcatctatttctta--tgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 36991475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 185 - 382
Target Start/End: Complemental strand, 40695398 - 40695204
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    ||||||| | |||||||| |||||| |||||||| |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||     
T  40695398 gatcctccctatttatgtatttatccatttcttcaatttggagggataaagaaacataaaatcttgaaaaaagtaaaatataactaatgatggtggaact 40695299  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||||| ||||||||        |||||||||||||||||||||  ||| ||||||||||||||| ||||||| | |||||||||||    
T  40695298 cacttagtggtaggacctaccatcta--ttttttgtgtctatctctctccaacttccaaa-ctccatttattttgctaaatggagaagatcttcaccc 40695204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 178 - 383
Target Start/End: Complemental strand, 10652776 - 10652572
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa--taaaatataactaatgat 275  Q
    |||| |||||||||||||||||||||||| |  |||||||| ||||||||||||||| ||||||||||| ||||| ||||   ||||||||| |||||||    
T  10652776 gggttaagatcctctccatttatgtgtttcttcatttcttcaatttggagagataaa-acacataaaattttgaaaaaaagtaaaaatataattaatgat 10652678  T
Q  276 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 375  Q
    ||||||||||| ||||| ||| ||||||||||| |        || ||||||||||||||||||| ||| | ||||||||||| ||||||||| ||||||    
T  10652677 ggtgggacccaattagtagtatgacccaccatcaa--ttttttgtatctatctctctccaacttgcaaaacaccatttattttaccaaatggagaggatc 10652580  T
Q  376 ttcacccc 383  Q
    ||||||||    
T  10652579 ttcacccc 10652572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 185 - 359
Target Start/End: Original strand, 41511186 - 41511358
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||||||||| | |    
T  41511186 gatcctctccatttatgtgtttttccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaaac 41511285  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttg 359  Q
    ||||||||| |||||||||| |||||         | ||||||||| ||||||||| ||| ||||||||||||||    
T  41511286 cacttagtgataggacccactatctatttttta--tatctatctctttccaacttgcaaaactccatttattttg 41511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 185 - 310
Target Start/End: Original strand, 24101940 - 24102065
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||| ||  |||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||| ||     
T  24101940 gatcctctccatttatgtgtttttctatttttttaatttggagagataaagacacgtaaaatcttgaaaaaaatgaaatataattaatgatggtggaact 24102039  T
Q  285 cacttagtggtaggacccaccatcta 310  Q
    ||||||||||||||| ||||||||||    
T  24102040 cacttagtggtaggatccaccatcta 24102065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 189 - 379
Target Start/End: Complemental strand, 44859314 - 44859128
Alignment:
Q  189 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 288  Q
    ||||||||||| |||||| ||  ||||||  |||||||||||||||||||| | |||| ||  | |||||||||||||| ||||||||||||||||||||    
T  44859314 ctctccatttacgtgtttttccttttctttaatttggagagataaagacacgtgaaattttttaaaaaataaaatataattaatgatggtgggacccact 44859215  T
Q  289 tagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 379  Q
    ||||||||| ||||||||||||          ||||||||||||| |||||| ||| |||||||||||||| ||||| || ||||||||||    
T  44859214 tagtggtagaacccaccatctattttta----gtctatctctctctaacttgcaaaactccatttattttgtcaaatagagaggatcttca 44859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 186 - 382
Target Start/End: Complemental strand, 10672662 - 10672470
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    ||||||| ||||||||||||| |  |||| ||| ||||||||||||||| | ||||||||| || || |   |||||||||| ||||||||||||||| |    
T  10672662 atcctcttcatttatgtgtttcttcatttattcaatttggagagataaaaatacataaaattttaaaaagggtaaaatataattaatgatggtgggactc 10672563  T
Q  286 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    |||||||||||||| ||||||||||        |||||||  ||||||||||||| ||| ||||||||||||||||||||||| || ||||||||||    
T  10672562 acttagtggtaggatccaccatcta--ttttttgtgtcta--tctctccaacttgcaaaactccatttattttgccaaatggagagaatcttcaccc 10672470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 190 - 309
Target Start/End: Complemental strand, 28319048 - 28318929
Alignment:
Q  190 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 289  Q
    |||||||||| |||||| || |||||||| ||||||||||| ||||||||||||||| || || ||| |||||||||| |||||||||| ||||||||||    
T  28319048 tctccatttacgtgtttctccatttcttcaatttggagagacaaagacacataaaattttaaaaaaagtaaaatataattaatgatggttggacccactt 28318949  T
Q  290 agtggtaggacccaccatct 309  Q
    ||||||||||||||| ||||    
T  28318948 agtggtaggacccactatct 28318929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 177 - 382
Target Start/End: Original strand, 45113186 - 45113390
Alignment:
Q  177 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 276  Q
    ||||| || ||||||||||||||| |  || |  |||| | ||||||||||||||| ||||||||||||| ||||| ||||||||| |||| ||||||||    
T  45113186 cgggtcaaaatcctctccatttatatccttcttcatttttaccatttggagagatatagacacataaaattttgaaaaaaataaaaaataattaatgatg 45113285  T
Q  277 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 376  Q
     |||||| ||||||||||| ||||||||||||||        |||||||| ||||||||| ||| ||| | | |||||||||  |||||||| |||||||    
T  45113286 atgggacacacttagtggttggacccaccatcta-ttcttttgtgtctatgtctctccaaattgcaaaacacaatttattttagcaaatggagaggatct 45113384  T
Q  377 tcaccc 382  Q
    | ||||    
T  45113385 taaccc 45113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 12177715 - 12177613
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    ||||||||| |||||||||||| || |||||||| ||||  |||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||| |    
T  12177715 gatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatggtgggatc 12177616  T
Q  285 cac 287  Q
    |||    
T  12177615 cac 12177613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 12422143 - 12422041
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    ||||||||| |||||||||||| || |||||||| ||||  |||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||| |    
T  12422143 gatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatggtgggatc 12422044  T
Q  285 cac 287  Q
    |||    
T  12422043 cac 12422041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 186 - 301
Target Start/End: Original strand, 8412179 - 8412294
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    ||||||||||||||||| ||| |  |||| |||||||| |||||||||| ||||||||||| ||||| ||| |||||||||| ||| ||||||| || |     
T  8412179 atcctctccatttatgtttttcttcattttttccatttagagagataaatacacataaaatattgaaaaaagtaaaatataattaacgatggtgagatct 8412278  T
Q  286 acttagtggtaggacc 301  Q
    ||||||||||||||||    
T  8412279 acttagtggtaggacc 8412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 27490159 - 27490038
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    |||||| ||||||||||||| ||| ||||||||||||||||| ||||| ||| | ||||||||||||||| ||| |||||||||| |||||||  |  ||    
T  27490159 aagatcttctccatttatgtctttctcaatttcttccatttgaagagacaaaaatacataaaatcttgaaaaaagtaaaatataattaatgatatttaga 27490060  T
Q  283 cccacttagtggtaggacccac 304  Q
    | ||||||||| ||||| ||||    
T  27490059 ctcacttagtgataggatccac 27490038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 5033310 - 5033372
Alignment:
Q  321 gtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  5033310 gtctatctctctccaacttgcaaaactccatttattttgccaaatggaaaggatcttcacccc 5033372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 5033023 - 5033091
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaat 246  Q
    |||| |||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||    
T  5033023 gggttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 5033091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 302
Target Start/End: Complemental strand, 36748611 - 36748525
Alignment:
Q  212 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggaccc 302  Q
    ||||||||||||||||||||||||||||| | || |||||  ||||||||  |||| |||||||||||||| ||||||| |||||||||||    
T  36748611 tttcttccatttggagagataaagacacagagaagcttga--aaaataaa--ataattaatgatggtgggatccacttaatggtaggaccc 36748525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 383
Target Start/End: Complemental strand, 37966583 - 37966399
Alignment:
Q  195 atttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtgg 294  Q
    |||||||| ||| || |||||||  ||||||||||||||||| ||||||||  || || ||| |||||||||| ||||| |  ||||  | | |||||||    
T  37966583 atttatgtctttctccatttcttttatttggagagataaagatacataaaaatttaaaaaaagtaaaatataattaatggtattgggttcaa-ttagtgg 37966485  T
Q  295 taggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    ||||||| || |||||        |||| ||||||||| ||| ||| |||| |||||||||||||||||||||| |||||||| |||||    
T  37966484 taggacctacaatctatttttt--gtgtttatctctcttcaaattgcaaat-tccatttattttgccaaatggagaggatcttaacccc 37966399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 26749626 - 26749581
Alignment:
Q  258 taaaatataactaatgatggtgggacccacttagtggtaggaccca 303  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  26749626 taaaaaataattaatgatggtgggacccacttagtgataggaccca 26749581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 1937233 - 1937185
Alignment:
Q  258 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 306  Q
    ||||| |||| ||||||||||||||||| ||||||| ||||||||||||    
T  1937233 taaaaaataattaatgatggtgggacccgcttagtgataggacccacca 1937185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 306
Target Start/End: Original strand, 34612498 - 34612609
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||||||||||   ||| || |||| |||||||| ||||||||||||||||||||         ||   |||| |||| ||||||||||| |||||    
T  34612498 atcctctccatttataaatttttccatttgttccatttagagagataaagacacataaa---------aagtaaaaaaataattaatgatggtgagaccc 34612588  T
Q  286 acttagtggtaggacccacca 306  Q
    |||||||| ||||||||||||    
T  34612589 acttagtgataggacccacca 34612609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 245
Target Start/End: Original strand, 21492733 - 21492767
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaa 245  Q
    |||||||||||||||||||||||||||||| ||||    
T  21492733 atttcttccatttggagagataaagacacacaaaa 21492767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 17867727 - 17867690
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  17867727 taatgatggtgggatccacttagtgataggacccacca 17867690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 21486584 - 21486644
Alignment:
Q  180 gtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacaca 240  Q
    ||||||||| ||| ||||||||| | | || |||||||||||||| |||||| ||||||||    
T  21486584 gtgaagatcatcttcatttatgtttctttccatttcttccatttgaagagatgaagacaca 21486644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 8e-75; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 176 - 379
Target Start/End: Original strand, 13238596 - 13238797
Alignment:
Q  176 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  13238596 acgggtgaagatcctctccatttatgcgtttctcaatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgat 13238695  T
Q  276 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 375  Q
    |||||||||||||| ||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  13238696 ggtgggacccacttggtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatc 13238793  T
Q  376 ttca 379  Q
    ||||    
T  13238794 ttca 13238797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 178 - 382
Target Start/End: Original strand, 28564808 - 28565011
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatc-ttgaacaaaataaaatataactaatgatg 276  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||| || || ||| |||||||||| ||||||||    
T  28564808 gggtgaagatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttttaaaaaagtaaaatataattaatgatg 28564907  T
Q  277 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 376  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||| ||||||  ||| ||||||||||||||||||||||| |||||||    
T  28564908 gtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctacaacttaaaaaactccatttattttgccaaatggagaggatct 28565005  T
Q  377 tcaccc 382  Q
    ||||||    
T  28565006 tcaccc 28565011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 185 - 382
Target Start/End: Original strand, 35316749 - 35316944
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    ||||||||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||    
T  35316749 gatcctctccatttacgtgtttctccatttcttcaatttggagagataaagacatataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 35316848  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||| ||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  35316849 cacttagtggtaggatccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 35316944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 211 - 384
Target Start/End: Complemental strand, 23259612 - 23259441
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 310  Q
    |||||||| |||| ||| |||||||||| |||||||||| || ||| |||||||||| |||||||||||||| ||||||||| ||||||||||||| |||    
T  23259612 atttcttcaattttgagggataaagacatataaaatcttaaaaaaagtaaaatataattaatgatggtgggatccacttagtagtaggacccaccagcta 23259513  T
Q  311 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 384  Q
            |||||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||    
T  23259512 --ttttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagaggatcttcacccca 23259441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 39465693 - 39465801
Alignment:
Q  179 ggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggt 278  Q
    ||||| |||||||||||||||||||||| || |||| ||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||    
T  39465693 ggtgatgatcctctccatttatgtgtttctccattttttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggt 39465792  T
Q  279 gggacccac 287  Q
    |||||||||    
T  39465793 gggacccac 39465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 41983497 - 41983401
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    |||| |||||||||||||||||||||||| || |||||||  |||||||||||||||||||||| |||||||||| ||| |||||||||| |||||||    
T  41983497 gggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacat-aaatcttgaaaaaagtaaaatataattaatgat 41983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 2061299 - 2061382
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatata 266  Q
    ||||||||||||||||||  || | |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  2061299 aagatcctctccatttattagtatctcaatttcttccatttggagagataaagacgcataaaatcttgaaaaaagtaaaatata 2061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 45625098 - 45625035
Alignment:
Q  319 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  45625098 gtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcaccc 45625035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 183 - 275
Target Start/End: Complemental strand, 374591 - 374499
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    ||||| |||||||||||||||||| ||  |||||| ||||| |||||||||| ||||||||||||||||| ||| |||||||||| |||||||    
T  374591 aagattctctccatttatgtgtttctccctttctttcatttagagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgat 374499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 45625199 - 45625111
Alignment:
Q  199 atgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 287  Q
    |||||||| || |||||||| |||| ||||||||||||||| |||||||||||| || |||||||| || |||||||||||||||||||    
T  45625199 atgtgtttctccatttcttcaatttagagagataaagacacgtaaaatcttgaaaaatataaaataaaattaatgatggtgggacccac 45625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 11864925 - 11864988
Alignment:
Q  319 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||||    
T  11864925 gtgtctatctctctccaacttgtaaaactccatttattttgataaatggagaggatcttcaccc 11864988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 42075510 - 42075456
Alignment:
Q  189 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataa 243  Q
    ||||||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  42075510 ctctccatttattagtttatccatttcttccatttggagagataaagacacataa 42075456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 185 - 282
Target Start/End: Original strand, 10877626 - 10877724
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatct--tgaacaaaataaaatataactaatgatggtggga 282  Q
    |||||||| ||||||||||||| || |||||||| ||||||||||||||| ||||||||||| |    || ||||| |||||||| ||||||||||||||    
T  10877626 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaa-acacataaaatttaaaaaaaaaaatgaaatataattaatgatggtggga 10877724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 12949392 - 12949494
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    |||||| ||||||| ||||| ||| ||  ||||| | ||||||||||||||||| ||||||||||||||| ||| ||||| |||| |||||| || ||||    
T  12949392 aagatcttctccatctatgtctttctccgtttctcctatttggagagataaagatacataaaatcttgaaaaaagtaaaa-ataattaatgacggcggga 12949490  T
Q  283 ccca 286  Q
    ||||    
T  12949491 ccca 12949494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 301
Target Start/End: Original strand, 8988782 - 8988895
Alignment:
Q  177 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 276  Q
    ||||| || |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||           |||||| |||| ||||||||    
T  8988782 cgggtcaatatcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa-----------ataaaaaataattaatgatg 8988870  T
Q  277 gtgggacccacttagtggtaggacc 301  Q
    ||||||||||||||||| |||||||    
T  8988871 gtgggacccacttagtgataggacc 8988895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 30709065 - 30709152
Alignment:
Q  217 tccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggaccca 303  Q
    |||||||||| ||||| |||| || ||||  ||||| |||| ||||| | || |||||||||||||| ||||||||||||||||||||    
T  30709065 tccatttggaaagatatagactcaaaaaaatttgaaaaaaagtaaaaaacaattaatgatggtgggatccacttagtggtaggaccca 30709152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 306
Target Start/End: Original strand, 374919 - 375038
Alignment:
Q  177 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 276  Q
    ||||| || ||| |||||||||||   ||| || |||| |||||||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  374919 cgggtcaatatcttctccatttataaatttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 375008  T
Q  277 gtgggacccacttagtggtaggacccacca 306  Q
    ||||||||||||||||  ||||||||||||    
T  375009 gtgggacccacttagtaataggacccacca 375038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 186 - 306
Target Start/End: Original strand, 29188588 - 29188698
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||||||||||||    
T  29188588 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgatggtgggaccc 29188677  T
Q  286 acttagtggtaggacccacca 306  Q
     ||||||| |||||| |||||    
T  29188678 gcttagtgataggacgcacca 29188698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 21454582 - 21454520
Alignment:
Q  248 ttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 310  Q
    ||||| ||| ||||| |||| |||||||||||| ||||||||| ||||| ||||||| |||||    
T  21454582 ttgaaaaaagtaaaaaataattaatgatggtggaacccacttaatggtatgacccacaatcta 21454520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 13780506 - 13780543
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  13780506 taatgatggtgggatccacttagtgataggacccacca 13780543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 302
Target Start/End: Complemental strand, 23459986 - 23459880
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||||||||||   ||| || |||| |||||||  |||||||||||||||||||||          | ||||| |||| |||||||||||||||||    
T  23459986 atcctctccatttataaatttctccatttgttccattcagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggaccc 23459897  T
Q  286 acttagtggtaggaccc 302  Q
    | |||||| ||||||||    
T  23459896 atttagtgataggaccc 23459880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 40254217 - 40254180
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  40254217 taatgatggtgggatccacttagtgataggacccacca 40254180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 40640731 - 40640783
Alignment:
Q  324 tatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 376  Q
    ||||||||||||| ||| ||| |||||||||||||  |||||||| |||||||    
T  40640731 tatctctctccaaattgcaaaactccatttattttaacaaatggagaggatct 40640783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 2e-72; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 179 - 386
Target Start/End: Complemental strand, 50294220 - 50294015
Alignment:
Q  179 ggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggt 278  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  50294220 ggtgaagaccctctccatttacgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggt 50294121  T
Q  279 gggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttc 378  Q
     ||| |||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  50294120 aggatccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatgaagaggatcttc 50294023  T
Q  379 accccacc 386  Q
    ||||||||    
T  50294022 accccacc 50294015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 178 - 384
Target Start/End: Complemental strand, 48327312 - 48327108
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatg 276  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| || |||||||||||||| ||||||||    
T  48327312 gggttaagatcctctccatttatgtgtttatcaatttcttccatttggagatataaaggtacataaaatcttgaaaaaaaataaaatataattaatgatg 48327213  T
Q  277 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 376  Q
    || ||||||||||||||||||||| |||||||||         ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||    
T  48327212 gt-ggacccacttagtggtaggactcaccatctattttttt--tgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatct 48327116  T
Q  377 tcacccca 384  Q
    ||||||||    
T  48327115 tcacccca 48327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 178 - 382
Target Start/End: Original strand, 50484303 - 50484505
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 277  Q
    |||| |||||||||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| ||    
T  50484303 gggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgacgg 50484402  T
Q  278 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 377  Q
    |||||||||||||||||| | ||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  50484403 tgggacccacttagtggttgtacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 50484500  T
Q  378 caccc 382  Q
    |||||    
T  50484501 caccc 50484505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 178 - 382
Target Start/End: Original strand, 12151684 - 12151886
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 277  Q
    |||| ||||||||| |||||||||||||| || |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  12151684 gggttaagatcctccccatttatgtgtttctccatttattcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 12151783  T
Q  278 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 377  Q
    ||||||||||||||||||||||||||| |||||        |||||| ||||||||||||| | ||| ||||||||||||||||||||||| | ||||||    
T  12151784 tgggacccacttagtggtaggacccacaatcta--ttttttgtgtctttctctctccaactggcaaaactccatttattttgccaaatggagaagatctt 12151881  T
Q  378 caccc 382  Q
    |||||    
T  12151882 caccc 12151886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 185 - 310
Target Start/End: Complemental strand, 12381061 - 12380936
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||     
T  12381061 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggact 12380962  T
Q  285 cacttagtggtaggacccaccatcta 310  Q
    ||||||||||||| ||||||||||||    
T  12380961 cacttagtggtagaacccaccatcta 12380936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 185 - 310
Target Start/End: Complemental strand, 12385128 - 12385003
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||     
T  12385128 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggact 12385029  T
Q  285 cacttagtggtaggacccaccatcta 310  Q
    ||||||||||||| ||||||||||||    
T  12385028 cacttagtggtagaacccaccatcta 12385003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 178 - 378
Target Start/End: Original strand, 40328193 - 40328390
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaa-gacacataaaatcttgaacaaaa-taaaatataactaatgat 275  Q
    |||| |||||||||| ||||||||||||| |  |||||||  ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  40328193 gggttaagatcctcttcatttatgtgtttcttcatttctttaatttggagagataaaagacacataaaatcttgaaaaaaagtaaaatataactaatgat 40328292  T
Q  276 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 375  Q
    ||||| |||||||||||||| ||||||||||||||        |||||||  ||||||||| ||| ||| ||||||||||||||||||||||| ||||||    
T  40328293 ggtggaacccacttagtggtgggacccaccatcta---tttttgtgtcta--tctctccaatttgcaaaactccatttattttgccaaatggagaggatc 40328387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 186 - 382
Target Start/End: Complemental strand, 23862106 - 23861908
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacc 284  Q
    ||||||| |||| |||||||| || |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |    
T  23862106 atcctcttcattcatgtgtttctctatttcttcaatttggaaagataaagacacataaaatcttgaaaaaaaataaaatataattaatgatggtgggatc 23862007  T
Q  285 cacttagtggtagga---cccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacc 381  Q
    |||||||||||||||    ||||||||||        |||||||||||||||||||||| ||| || |||||||||||| |||| || ||||| ||||||    
T  23862006 cacttagtggtaggattcaccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacttcatttattttgctaaatagagaggatattcacc 23861909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 45977946 - 45978048
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| |||||||    
T  45977946 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaacgatgctgggacc 45978045  T
Q  285 cac 287  Q
    |||    
T  45978046 cac 45978048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 7841857 - 7841763
Alignment:
Q  189 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggac 283  Q
    |||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  7841857 ctctccatttatatgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 7841763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 204 - 310
Target Start/End: Original strand, 24977183 - 24977289
Alignment:
Q  204 tttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggaccc 302  Q
    |||||| ||||||| ||||| |||||||||| ||| ||||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||| ||    
T  24977183 tttatccatttcttacatttagagagataaataca-ataaaatcttgaaaaaaaataaaatataactaatgattgtggaacccacttagtggtaggatcc 24977281  T
Q  303 accatcta 310  Q
    ||||||||    
T  24977282 accatcta 24977289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 12380896 - 12380832
Alignment:
Q  319 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  12380896 gtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 12380832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 12384963 - 12384899
Alignment:
Q  319 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  12384963 gtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 12384899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 186 - 382
Target Start/End: Complemental strand, 18976452 - 18976260
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||||||||||||  || |  |||||| ||||||||||||||| | ||||  ||||| ||||| ||||||||| |||| |||||||| |||||||     
T  18976452 atcctctccatttatgtccttcttcatttctaccatttggagagatataaacac--aaaattttgaaaaaaataaaa-ataattaatgatgatgggacct 18976356  T
Q  286 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||| |||| ||| ||||||||||        |||||||||||||||||| ||| ||| ||| |||||||||  |||||||| |||||||| ||||    
T  18976355 acttaatggttggatccaccatcta-ttcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaaccc 18976260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 46608525 - 46608409
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    ||||||||||||||||||||  |   | |||||||||||||||||| |||||||||||  || | ||||| ||| ||||| |||| |||||||||||||     
T  46608525 aagatcctctccatttatgtcct---ccatttcttccatttggagaaataaagacaca--aagttttgaaaaaagtaaaaaataattaatgatggtgggt 46608431  T
Q  283 cccacttagtggtaggacccac 304  Q
    ||||||||||||||||||||||    
T  46608430 cccacttagtggtaggacccac 46608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 183 - 284
Target Start/End: Original strand, 2845187 - 2845289
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttct-tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggg 281  Q
    |||||||||||||||||||| ||| || |||||| || ||||||||||||||| ||||| ||||| ||||| | | |||||||||| |||||||||||||    
T  2845187 aagatcctctccatttatgtttttctctatttctatcaatttggagagataaatacacacaaaattttgaaaatagtaaaatataattaatgatggtggg 2845286  T
Q  282 acc 284  Q
    |||    
T  2845287 acc 2845289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 183 - 299
Target Start/End: Complemental strand, 5047533 - 5047418
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    ||||||||||||||||||   | | || ||||||||||||| ||||||||||| |||| ||||  ||||| |||||| || |||| ||||||||||||||    
T  5047533 aagatcctctccatttattactatctccatttcttccatttagagagataaaggcacaaaaaagtttgaa-aaaatataaaataattaatgatggtggga 5047435  T
Q  283 cccacttagtggtagga 299  Q
    ||||| |||||||||||    
T  5047434 cccacatagtggtagga 5047418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 382
Target Start/End: Complemental strand, 7840739 - 7840635
Alignment:
Q  276 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 375  Q
    |||||||||| |||| |||||||||||| ||||||        |||||||||||||||||||||  ||| ||||||||||| ||||||||| | ||||||    
T  7840739 ggtgggacccgcttaatggtaggacccatcatctatttctt--gtgtctatctctctccaacttacaaaactccatttattctgccaaatgaataggatc 7840642  T
Q  376 ttcaccc 382  Q
    |||||||    
T  7840641 ttcaccc 7840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 1609691 - 1609617
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa 257  Q
    |||||||||| ||||||||| |||  | ||||||| ||||| ||||| |||||||||||||||||||||| ||||    
T  1609691 aagatcctcttcatttatgtcttttcccatttctttcatttagagaggtaaagacacataaaatcttgaagaaaa 1609617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 304
Target Start/End: Complemental strand, 32887905 - 32887812
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccac 304  Q
    ||||||| |||||||||||||| |||| || ||||  ||||| |||||  || |||| |||||||||||||||||| ||| |||||||| ||||    
T  32887905 atttctttcatttggagagatatagactcaaaaaagtttgaaaaaaattgaaaataattaatgatggtgggacccatttaatggtaggatccac 32887812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 45978064 - 45978124
Alignment:
Q  322 tctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||||||| ||| |||||||||||||  ||||| || |||||||||||||    
T  45978064 tctatctctctccaacttgcaaaactccatttattttatcaaatagagaggatcttcaccc 45978124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 39426166 - 39426315
Alignment:
Q  217 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnn 316  Q
    |||||||||||||||| |||| || |   ||||  | ||| ||||| |||| ||||||| |||||||||| ||||||||||||||||| |||||          
T  39426166 tccatttggagagatatagactcaaattttcttagaaaaagtaaaaaataattaatgatagtgggacccaattagtggtaggacccactatcta--tttt 39426263  T
Q  317 nngtgtctatctctctccaacttgtaaatctccatttattttgccaaatgga 368  Q
      |||||||||||||||||| ||||  |  ||||||||||||  ||||||||    
T  39426264 atgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgga 39426315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 680170 - 680101
Alignment:
Q  176 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 245  Q
    |||||| | ||||||||||||||||   |||||||||||  || ||||||||||||||||||||| ||||    
T  680170 acgggttaggatcctctccatttataactttatcaatttactctatttggagagataaagacacacaaaa 680101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 186 - 299
Target Start/End: Original strand, 23916013 - 23916124
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    ||||||||||||| | | ||| || |||| || |||||||||| ||||| ||||| ||||| ||||| ||| |  || |||| |||||||||||||||||    
T  23916013 atcctctccatttgtatttttctccatttatttcatttggagatataaaaacaca-aaaat-ttgaaaaaagtttaaaataattaatgatggtgggaccc 23916110  T
Q  286 acttagtggtagga 299  Q
    || |||||||||||    
T  23916111 acgtagtggtagga 23916124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 44483718 - 44483815
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatct 309  Q
    ||||||| |||||| ||||||||||||||  | ||| ||| || ||||||||| |||| |||||||||||| | ||| ||| ||||||||||||| ||||    
T  44483718 atttcttgcatttgaagagataaagacac--acaattttgaaaaaaaataaaaaataattaatgatggtggaatccatttaatggtaggacccacaatct 44483815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 52280117 - 52280069
Alignment:
Q  258 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 306  Q
    ||||| |||| |||||||||||||| |||||||||| ||||||||||||    
T  52280117 taaaaaataattaatgatggtgggatccacttagtgataggacccacca 52280069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 299
Target Start/End: Original strand, 7844939 - 7845026
Alignment:
Q  212 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtagga 299  Q
    ||||||||||||| ||||||||||| ||| | ||  ||||| ||| || ||  ||| |||| |||||||||| |||||||||||||||    
T  7844939 tttcttccatttgaagagataaagatacaaagaagtttgaaaaaagtataaactaattaataatggtgggacacacttagtggtagga 7845026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 40988643 - 40988721
Alignment:
Q  189 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataa 267  Q
    ||||||||||||   ||| || |||| ||| ||||||||||||||||||||| ||||| ||||| ||| ||||| ||||    
T  40988643 ctctccatttataactttctccattttttctatttggagagataaagacacacaaaattttgaaaaaagtaaaaaataa 40988721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 6948899 - 6948862
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  6948899 taatgatggtgggatccacttagtgataggacccacca 6948862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 19910469 - 19910583
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttc-----ttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatg 276  Q
    |||| ||||| ||||||||| ||| || |||||     ||||||||||||||||||  ||||||||||| ||| || |||||||||||||| |||| |||    
T  19910469 aagaacctcttcatttatgtctttctctatttcttccattccatttggagagataa--acacataaaattttgaaaaaaaataaaatataattaataatg 19910566  T
Q  277 gtgggacccacttagtg 293  Q
    ||  ||||||| |||||    
T  19910567 gtatgacccacctagtg 19910583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 24413400 - 24413310
Alignment:
Q  208 tcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccat 307  Q
    |||||||||||||||| ||| ||||| |||||| ||||||||||| | |||          |||||||||||||||||| ||| || |||||||||||||    
T  24413400 tcaatttcttccattttgagggataaggacacaaaaaatcttgaaaataat----------taatgatggtgggacccatttaatgataggacccaccat 24413311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 30077794 - 30077725
Alignment:
Q  176 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 245  Q
    |||||| || |||||||||||||||   ||| || |||| |||||||| |||| ||||||||||||||||    
T  30077794 acgggtcaatatcctctccatttataaatttctctatttgttccatttagagaaataaagacacataaaa 30077725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 45970804 - 45970861
Alignment:
Q  219 catttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 276  Q
    |||||| ||||||||||||||| ||||| ||||| ||| ||||| |||| ||||||||    
T  45970804 catttgaagagataaagacacacaaaattttgaaaaaagtaaaaaataattaatgatg 45970861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 42720882 - 42720819
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    ||||||| ||||| |||||||||||||||||||| | ||||| |||||| || |||| |||||||    
T  42720882 atttctttcatttagagagataaagacacataaagttttgaa-aaaatacaaaataaataatgat 42720819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 7e-72; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 176 - 382
Target Start/End: Complemental strand, 9559213 - 9559010
Alignment:
Q  176 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    ||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  9559213 acgggtgaagatc-tctccatttatatgtttctcgatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgat 9559115  T
Q  276 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 375  Q
    |||||||||||||||||||||||||||||||||||        || ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  9559114 ggtgggacccacttagtggtaggacccaccatcta--ttttttgtatctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatc 9559017  T
Q  376 ttcaccc 382  Q
    |||||||    
T  9559016 ttcaccc 9559010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 181 - 384
Target Start/End: Original strand, 4888387 - 4888588
Alignment:
Q  181 tgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgg 280  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||    
T  4888387 tgaagatcctcttcatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttaaaaaacataaaatataattaatgatggtgg 4888486  T
Q  281 gacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcac 380  Q
    |||| ||||||||||||||||||| |||||        |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  4888487 gacctacttagtggtaggacccactatcta--ttttttgtgtctatctctctccaacttgcaaatctccatttattttgtcaaatggagaggatcttcac 4888584  T
Q  381 ccca 384  Q
    ||||    
T  4888585 ccca 4888588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 189 - 382
Target Start/End: Original strand, 21151080 - 21151271
Alignment:
Q  189 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 288  Q
    |||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  21151080 ctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccact 21151179  T
Q  289 tagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||| || |||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  21151180 tagtggtaggatcctccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 21151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 185 - 383
Target Start/End: Original strand, 16366442 - 16366638
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||| ||||||||||||||||| || |||||||| ||||||||||||||| |||| |||||||||||| ||| |||||||||| |||||||||||||||     
T  16366442 gatcatctccatttatgtgtttctccatttcttcaatttggagagataaaaacacgtaaaatcttgaaaaaagtaaaatataattaatgatggtgggaca 16366541  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    ||||||||||||||| ||||||||||         ||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||    
T  16366542 cacttagtggtaggatccaccatctatttctta--tgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 16366638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 185 - 383
Target Start/End: Original strand, 18198180 - 18198376
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||||||| ||||| |||||||||  |||||||||||||||| |||||||||||||| |||||||||||||||     
T  18198180 gatcctctccatttatgtgtttctccatttcttcaatttgtagagataaaatcacataaaatcttgaaaaaaataaaatataattaatgatggtgggact 18198279  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    |||||||||| || ||||||||||||        |||||||| | ||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  18198280 cacttagtggcagaacccaccatcta--ttttttgtgtctatttatctccaatttgcaaaactccatttattttgccaaatggagaggatcttcacccc 18198376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 187 - 381
Target Start/End: Complemental strand, 45260576 - 45260384
Alignment:
Q  187 tcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccca 286  Q
    ||||||| |||||||||||| || |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||| ||||| |||    
T  45260576 tcctctctatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggatcca 45260477  T
Q  287 cttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacc 381  Q
    ||||||||||||| |||| |||||        |||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||    
T  45260476 cttagtggtaggatccacaatcta--ttttttgtgtctatctctctccaacttgcaaaactcaatttattttgccaaatggagaggatcttcacc 45260384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 190 - 382
Target Start/End: Original strand, 7362497 - 7362686
Alignment:
Q  190 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 289  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||| ||    
T  7362497 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaacccattt 7362596  T
Q  290 agtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||| |||||||||||||        |||||||||||||||||| ||| ||| |||||||||||||| |||||||| | |||||||||||    
T  7362597 agtggtacgacccaccatcta--ttttttgtgtctatctctctccaatttgcaaaactccatttattttgtcaaatggaga-gatcttcaccc 7362686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 185 - 379
Target Start/End: Complemental strand, 47226224 - 47226035
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||| | ||| |||||||||| ||||||||||||||||    
T  47226224 gatcctctccatttatgtgtttctctatttcttcaatttggagagataaa-acacataaaatcttggaaaaagtaaaatataattaatgatggtgggacc 47226126  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 379  Q
    || |||||||| ||||||||||| |         |||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  47226125 catttagtggtgggacccaccatat----tttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 47226035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 185 - 383
Target Start/End: Original strand, 12139252 - 12139447
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga-c 283  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||  |||||||||||||| || ||| |||||||||| |||||||||||||| |    
T  12139252 gatcctctccatttatgtgtttctccatttcttcaatttggagagataa--acacataaaatcttaaaaaaagtaaaatataattaatgatggtgggacc 12139349  T
Q  284 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    ||||||| |||||||||||||||||||        |||||||||||||||||||||| ||| || |||||||||||||||||| | || |||||||||||    
T  12139350 ccacttaatggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacttcatttattttgccaaatgaagagaatcttcacccc 12139447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 185 - 384
Target Start/End: Original strand, 44647889 - 44648085
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgg--ga 282  Q
    |||||||||||||||||||||| || |||||||| |||||   ||||||||||||||||||||||||| ||  |||||||||| ||||||||| ||  ||    
T  44647889 gatcctctccatttatgtgtttctccatttcttcaatttg---agataaagacacataaaatcttgaaaaatgtaaaatataattaatgatggagggaga 44647985  T
Q  283 cccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||| ||| ||||||||||        |||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  44647986 cccacttagtggtcggatccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 44648083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 185 - 310
Target Start/End: Complemental strand, 25084879 - 25084754
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||| ||  ||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  25084879 gatcctctccatttatgtgtttctccatttttttaatttgaagagataaagacacataaaattttgaaaaaaataaaatataattaatgatggtgggacc 25084780  T
Q  285 cacttagtggtaggacccaccatcta 310  Q
    ||||||||||||||||||||||||||    
T  25084779 cacttagtggtaggacccaccatcta 25084754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 177 - 384
Target Start/End: Original strand, 33450422 - 33450628
Alignment:
Q  177 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 276  Q
    ||||| || ||||||| |||||||||  || || |||||| ||||||||||||||| | ||||| ||||| ||||| ||||||||| |||| ||||||||    
T  33450422 cgggtcaaaatcctcttcatttatgtccttctccatttctaccatttggagagatataaacacacaaaattttgaaaaaaataaaaaataattaatgatg 33450521  T
Q  277 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 376  Q
     |||||||||||||||||| ||||||||||||||        |||||||||||||||||| ||| ||| ||| |||||||||  |||||||| |||||||    
T  33450522 atgggacccacttagtggttggacccaccatcta-ttcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatct 33450620  T
Q  377 tcacccca 384  Q
    | ||||||    
T  33450621 taacccca 33450628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 186 - 383
Target Start/End: Complemental strand, 47500433 - 47500237
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||||||||||||  || || |||||| |||||| |||||||| ||||||| ||||| ||||| ||||||||| |||| |||||||| ||||||||    
T  47500433 atcctctccatttatgtccttctccatttctaccatttagagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 47500334  T
Q  286 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    |||||||||| ||||||||||||||        |||||||||||||||||| ||  ||| ||| |||||||||   ||||||| |||||||| |||||    
T  47500333 acttagtggttggacccaccatcta-ttcttttgtgtctatctctctccaaattacaaaactcaatttattttagtaaatggagaggatcttaacccc 47500237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 183 - 310
Target Start/End: Original strand, 29630970 - 29631097
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    ||||||||||||||| |||| ||| || ||||||| |||||||||| ||||||||||||||||| ||||| ||| ||||  |||| ||||||| ||||||    
T  29630970 aagatcctctccattcatgtctttctccatttctttcatttggagatataaagacacataaaattttgaaaaaagtaaagaataattaatgatagtggga 29631069  T
Q  283 cccacttagtggtaggacccaccatcta 310  Q
    || || ||||||| |||||||| |||||    
T  29631070 cctacatagtggttggacccactatcta 29631097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 186 - 358
Target Start/End: Complemental strand, 34986095 - 34985925
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacc 284  Q
    ||||||||||||||||| ||| || |||||| ||||||||||||||| ||  ||||||||| ||| || ||||||||| |||| |||||||| ||||||     
T  34986095 atcctctccatttatgtctttctccatttctaccatttggagagatatag--acataaaattttgaaaaaaaataaaaaataattaatgatgatgggact 34985998  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttatttt 358  Q
    || ||||||||  |||||||||||||        |||||||||||||||||| ||| ||| ||| |||||||||    
T  34985997 catttagtggtttgacccaccatcta-ttcttttgtgtctatctctctccaaattgcaaaactcaatttatttt 34985925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 183 - 304
Target Start/End: Original strand, 32915881 - 32915999
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    ||||||||| ||||||||||  || || |||||||||||||||||||||||||||||| ||||  ||    |||| ||||||||| | ||||||||||||    
T  32915881 aagatcctccccatttatgttcttctccatttcttccatttggagagataaagacacaaaaaagttt---taaaaaaaaatataattcatgatggtggga 32915977  T
Q  283 cccacttagtggtaggacccac 304  Q
    | |||||| |||||||||||||    
T  32915978 ctcacttaatggtaggacccac 32915999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 39855913 - 39855840
Alignment:
Q  236 acacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatct 309  Q
    |||| |||||||||||| ||| |||||| ||| |||||||| |||||||||||||||||||||||| |||||||    
T  39855913 acacttaaaatcttgaaaaaagtaaaatttaattaatgatgatgggacccacttagtggtaggaccgaccatct 39855840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 40019628 - 40019712
Alignment:
Q  208 tcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagt 292  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| ||| || ||  ||| ||||||||||||||| || |||||    
T  40019628 tcaatttcctccatttggagagataaaaacacaaaaaatcttgaaaaaagtataaagtaattaatgatggtgggactcatttagt 40019712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 30153305 - 30153225
Alignment:
Q  213 ttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtg 293  Q
    |||||||||||||||||||||||||| | ||||  ||||| |||||| || |||| |||||||||| | || |||||||||    
T  30153305 ttcttccatttggagagataaagacaaaaaaaaaattgaaaaaaatataaaataattaatgatggtagtactcacttagtg 30153225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 379
Target Start/End: Complemental strand, 47271166 - 47271107
Alignment:
Q  319 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 379  Q
    |||||||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||||||    
T  47271166 gtgtctatctctctccaaattgcaaa-ctccatttattttgctaaatggagaggatcttca 47271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 46802448 - 46802357
Alignment:
Q  217 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 310  Q
    |||||||||||||||||| |||||  |||  ||||| |||  | || |||| ||| | ||||||||||||||||||||||||||||||| ||||    
T  46802448 tccatttggagagataaaaacaca--aaagtttgaagaaagcataaaataattaacggtggtgggacccacttagtggtaggacccaccgtcta 46802357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 47799978 - 47799933
Alignment:
Q  258 taaaatataactaatgatggtgggacccacttagtggtaggaccca 303  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  47799978 taaaaaataattaatgatggtgggacccacttagtgataggaccca 47799933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 19889183 - 19889066
Alignment:
Q  177 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 276  Q
    ||||| || ||||||||||| |||   ||| || |||| |||||||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  19889183 cgggtaaatatcctctccatctataaatttctccatttattccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 19889094  T
Q  277 gtgggacccacttagtggtaggacccac 304  Q
    |||| |||||||||||| ||||||||||    
T  19889093 gtggaacccacttagtgataggacccac 19889066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 30588532 - 30588576
Alignment:
Q  258 taaaatataactaatgatggtgggacccacttagtggtaggaccc 302  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||    
T  30588532 taaaaaataattaatgatggtgggacccacttagtgataggaccc 30588576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 304
Target Start/End: Original strand, 32916104 - 32916212
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||||||||||   ||| || ||||||||||||| |||||||||| ||||| ||||          ||||||| |||| |||||||||||| | ||    
T  32916104 atcctctccatttataactttctccatttcttccattttgagagataaatacacacaaaa----------aataaaaaataattaatgatggtggaatcc 32916193  T
Q  286 acttagtggtaggacccac 304  Q
    ||||||||||| |||||||    
T  32916194 acttagtggtatgacccac 32916212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 303
Target Start/End: Original strand, 47080360 - 47080470
Alignment:
Q  190 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 289  Q
    |||||||||||   ||| || |||| ||| |||| |||||||| ||||||||||||  |  || ||||||||| ||   ||||||||||||||||| |||    
T  47080360 tctccatttataaatttctccatttgttctatttagagagatagagacacataaaaagtaaaaaaaaataaaaaat---taatgatggtgggacccgctt 47080456  T
Q  290 agtggtaggaccca 303  Q
    |||| |||||||||    
T  47080457 agtgataggaccca 47080470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 11828991 - 11828945
Alignment:
Q  254 aaaataaaatataactaatgatggtgggacccacttagtggtaggac 300  Q
    ||||||||| |||| |||||||||||| ||||||||| |||||||||    
T  11828991 aaaataaaaaataattaatgatggtggaacccacttaatggtaggac 11828945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 19027751 - 19027713
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccaccat 307  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  19027751 taatgatggtgggatccacttagtgataggacccaccat 19027713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 307
Target Start/End: Original strand, 20726885 - 20726923
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccaccat 307  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  20726885 taatgatggtgggatccacttagtgataggacccaccat 20726923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 4269187 - 4269224
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  4269187 taatgatggtgggatccacttagtgataggacccacca 4269224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 6568460 - 6568419
Alignment:
Q  204 tttatcaatttcttccatttggagagataaagacacataaaa 245  Q
    |||||| |||||| ||||||||||||||||||||||| ||||    
T  6568460 tttatccatttctaccatttggagagataaagacacacaaaa 6568419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 14696825 - 14696788
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  14696825 taatgatggtgggatccacttagtgataggacccacca 14696788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 30102501 - 30102538
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  30102501 taatgatggtgggatccacttagtgataggacccacca 30102538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 6882209 - 6882149
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 245  Q
    ||||||||| ||||||   ||| || |||| ||||||||| ||||||||||||||||||||    
T  6882209 gatcctctcaatttataactttctccatttgttccatttgaagagataaagacacataaaa 6882149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 25331767 - 25331827
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 245  Q
    ||||||||||||||||   ||||||||||| ||||||||| ||||| ||| ||||| ||||    
T  25331767 gatcctctccatttataactttatcaatttattccatttgaagagacaaatacacacaaaa 25331827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 4e-67; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 185 - 383
Target Start/End: Original strand, 4804372 - 4804568
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  4804372 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 4804471  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  4804472 cacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacccc 4804568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 178 - 381
Target Start/End: Complemental strand, 1249304 - 1249105
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 277  Q
    |||| |||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  1249304 gggttaagatcctctccatttatgtgtttctccatttcttcaatttggaaagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 1249205  T
Q  278 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 377  Q
    |||||||||||||||||||||||||||||||||         ||||| ||||||||||||||  ||| ||||||||||||||||||||||| ||||||||    
T  1249204 tgggacccacttagtggtaggacccaccatctattttt----tgtctgtctctctccaacttacaaaactccatttattttgccaaatggagaggatctt 1249109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 178 - 379
Target Start/End: Original strand, 27826455 - 27826654
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 277  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||  | |||||||||||||| |||||||||    
T  27826455 gggtgaagatcctctccatttatgtgtttctcaatttcttccattttgagagataaagacacataaaaaattttaaaaaataaaatataattaatgatgg 27826554  T
Q  278 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 377  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||| | |||| |||||| || ||||||| ||||||||| ||||||||    
T  27826555 tgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctcaaccttgcaaatcttcagttattttaccaaatggagaggatctt 27826652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 185 - 382
Target Start/End: Original strand, 7162008 - 7162203
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    ||||||||| ||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  7162008 gatcctctctatttacgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 7162107  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    |||||||| |||||||||||||||||        |||||||||||||||||||||| ||| |||||||||||||  |||||||| | |||||||||||    
T  7162108 cacttagtagtaggacccaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 7162203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 185 - 384
Target Start/End: Complemental strand, 21159516 - 21159323
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||| |||||||||    | |||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  21159516 gatcctctccgtttatgtgt----ccatttcttcaatttggagatataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 21159421  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 384  Q
    ||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| || ||||||||||  |||||||| |||||||||||||||    
T  21159420 cacttagtggtaggacccaccatcta--ttttttgtgtctatttctctccaacttgcaaaacttcatttattttaacaaatggagaggatcttcacccca 21159323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 201 - 383
Target Start/End: Original strand, 17944102 - 17944282
Alignment:
Q  201 gtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggac 300  Q
    |||||| || |||||||| ||||||||||||||| ||||||||||||||| | ||| |||||||||| |||||||||||||||||| |||||||||||||    
T  17944102 gtgtttctccatttcttcaatttggagagataaaaacacataaaatcttggaaaaagtaaaatataattaatgatggtgggacccatttagtggtaggac 17944201  T
Q  301 ccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    | ||||||||        |||||||||||||||||||||  ||| ||||||||||||||||||||| | ||||||||||||||    
T  17944202 ctaccatcta--ttttttgtgtctatctctctccaacttacaaaactccatttattttgccaaatgaagaggatcttcacccc 17944282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 211 - 382
Target Start/End: Original strand, 12412587 - 12412756
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 310  Q
    |||||||| ||||||||||||||| | ||||||||| ||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  12412587 atttcttcaatttggagagataaaaatacataaaattttgaaaaaagtaaaatataattaatgatggtggaacccacttagtggtaggacccaccatcta 12412686  T
Q  311 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
            |||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||| ||||    
T  12412687 --tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaagatctttaccc 12412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 185 - 310
Target Start/End: Original strand, 29698087 - 29698212
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  29698087 gatcctctccatttatgtgtttctccatttcttcaatttggagaaataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 29698186  T
Q  285 cacttagtggtaggacccaccatcta 310  Q
    |||||| |||||||| ||||||||||    
T  29698187 cacttaatggtaggatccaccatcta 29698212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 236 - 382
Target Start/End: Complemental strand, 13089849 - 13089705
Alignment:
Q  236 acacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctcca 335  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||        |||||||||||||||||    
T  13089849 acacataaaattttgaaaaaaataaaatataattaatgatggtggggcccacttagtggtaggacccaccatcta--tattttgtgtctatctctctcca 13089752  T
Q  336 acttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||| ||| | ||||||||||||||||||||| |||||||||||||    
T  13089751 acttgcaaaacaccatttattttgccaaatggagaggatcttcaccc 13089705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 32737798 - 32737900
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||| |||    
T  32737798 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtggaacc 32737897  T
Q  285 cac 287  Q
    |||    
T  32737898 cac 32737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 186 - 379
Target Start/End: Complemental strand, 227714 - 227522
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    ||||||| |||||||||| || || |||||| | ||||||||||||| ||||||| ||| | ||||| ||  ||||| ||||  ||||||| ||||| ||    
T  227714 atcctcttcatttatgtgcttctccatttctacaatttggagagatatagacacacaaagttttgaaaaaggtaaaaaataatcaatgatgatgggatcc 227615  T
Q  286 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 379  Q
    |||||||||||||||||||||||||        ||||||||||||||||||  || ||| |||||||||||||  |||||||| ||||||||||    
T  227614 acttagtggtaggacccaccatcta-ttcttttgtgtctatctctctccaaaatgcaaaactccatttattttagcaaatggagaggatcttca 227522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 211 - 299
Target Start/End: Original strand, 30460770 - 30460858
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtagga 299  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||| | || ||||| || ||| ||||||||    
T  30460770 atttcttctatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaataacggcgggactcatttaatggtagga 30460858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 32737913 - 32737976
Alignment:
Q  319 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||||||| || ||| ||| ||||||||||||||||||| |||||||||||||    
T  32737913 gtgtctatctctctccaacctgcaaaactctatttattttgccaaatggagaggatcttcaccc 32737976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 217 - 384
Target Start/End: Complemental strand, 2800730 - 2800565
Alignment:
Q  217 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnn 316  Q
    |||||||||||||||| | || || ||||  ||||| ||| ||||| ||||  ||||||||||||||||||||| ||||| || |||| |||||          
T  2800730 tccatttggagagatataaactcaaaaaaaattgaaaaaagtaaaaaataatcaatgatggtgggacccacttaatggtatgatccactatcta--tttt 2800633  T
Q  317 nngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 384  Q
      |||||||||||||||||| ||||  || |||||| |||||  |||||||| |||||| | ||||||    
T  2800632 atgtgtctatctctctccaaattgtgtatttccattaattttatcaaatggagaggatcctaacccca 2800565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 17398818 - 17398773
Alignment:
Q  212 tttcttccatttggagagataaagacacataaaatcttgaacaaaa 257  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||    
T  17398818 tttcctccatttggagagataaagacacataaaatcttgaaaaaaa 17398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 287
Target Start/End: Complemental strand, 1516314 - 1516238
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 287  Q
    ||||||| |||||| | ||||||| ||||||||||| || || ||| |||||||||| |||||||||||||| ||||    
T  1516314 atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1516238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 287
Target Start/End: Complemental strand, 1518403 - 1518327
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 287  Q
    ||||||| |||||| | ||||||| ||||||||||| || || ||| |||||||||| |||||||||||||| ||||    
T  1518403 atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1518327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 24484876 - 24484924
Alignment:
Q  258 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 306  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  24484876 taaaaaataattaatgatggtgggacccacttagtgataggacccacca 24484924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 1516219 - 1516163
Alignment:
Q  325 atctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||| |||||||| ||||    
T  1516219 atctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaaccc 1516163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 1518308 - 1518252
Alignment:
Q  325 atctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||| |||||||| ||||    
T  1518308 atctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaaccc 1518252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 2720366 - 2720411
Alignment:
Q  254 aaaataaaatataactaatgatggtgggacccacttagtggtagga 299  Q
    |||||| || |||| |||||||||||||||||||||||||||||||    
T  2720366 aaaatataaaataattaatgatggtgggacccacttagtggtagga 2720411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 374
Target Start/End: Complemental strand, 7215919 - 7215816
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatgga 368  Q
    ||||||| |||||||||| ||||||||||||||||| |||||        |||||||||||||||||| ||||  |  ||||||||||||  ||||||||    
T  7215919 taatgatagtgggacccaattagtggtaggacccactatcta--ttttatgtgtctatctctctccaaattgtgcacttccatttattttatcaaatgga 7215822  T
Q  369 caggat 374  Q
     |||||    
T  7215821 gaggat 7215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 1515554 - 1515498
Alignment:
Q  325 atctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    |||||||||||| ||| ||| |||||||||||||||||||| || |||||||| ||||    
T  1515554 atctctctccaaattgcaaa-ctccatttattttgccaaattgataggatcttaaccc 1515498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 7098263 - 7098226
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  7098263 taatgatggtgggatccacttagtgataggacccacca 7098226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 17275921 - 17276014
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccac 304  Q
    |||| ||| |||||||||||||||||  ||||||||||| || ||||||||| |||| |||  || ||||| | ||  ||||||| ||||||||    
T  17275921 atttattctatttggagagataaagatgcataaaatcttaaaaaaaataaaaaataattaactatagtggggctcatatagtggtgggacccac 17276014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 368
Target Start/End: Complemental strand, 28696673 - 28696626
Alignment:
Q  320 tgtctatctctctccaacttgtaaatctccatttattttgccaaatgga 368  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||||||    
T  28696673 tgtctatctctctccaaattgcaaa-ctcaatttattttgccaaatgga 28696626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 32254113 - 32254061
Alignment:
Q  254 aaaataaaatataactaatgatggtgggacccacttagtggtaggacccacca 306  Q
    ||||||||| |||| ||||||| ||||||| |||||| || ||||||||||||    
T  32254113 aaaataaaaaataattaatgatagtgggactcacttaatgataggacccacca 32254061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 7e-66; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 178 - 382
Target Start/End: Complemental strand, 19902076 - 19901874
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 277  Q
    |||| |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||    
T  19902076 gggttaagatcctctccatttatgtgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 19901977  T
Q  278 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 377  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||||    
T  19901976 tgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 19901879  T
Q  378 caccc 382  Q
    |||||    
T  19901878 caccc 19901874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 178 - 382
Target Start/End: Original strand, 24073534 - 24073735
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 277  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| |||| || |||||| |||||||||    
T  24073534 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagatgaaggcacataaaatcttgaa-aaaaaaatatataattaatgatgg 24073632  T
Q  278 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 377  Q
     ||||||||||||||||||||||||||||||||        |||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||    
T  24073633 cgggacccacttagtggtaggacccaccatcta--tttgttgtgtctatctctctccaacttacaaatctccatttattttgccaaatggggaggatctt 24073730  T
Q  378 caccc 382  Q
    |||||    
T  24073731 caccc 24073735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 185 - 383
Target Start/End: Original strand, 56558203 - 56558399
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  56558203 gatcctctccatttatatgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 56558302  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    ||||||||| ||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  56558303 cacttagtgataggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 56558399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 186 - 381
Target Start/End: Original strand, 34778346 - 34778539
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    ||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  34778346 atcctctccatttatgtgtttctccatttcttcaatgtggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 34778445  T
Q  286 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacc 381  Q
    |||||||||||||| ||||||||||        |||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  34778446 acttagtggtaggatccaccatcta--ttttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 34778539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 185 - 383
Target Start/End: Complemental strand, 5763313 - 5763117
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||| ||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  5763313 gatcatctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 5763214  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    ||||||||||||||||||||||||||        || ||||||||||||||||||||||| |||||| ||||||||||||| || ||||||||||||||    
T  5763213 cacttagtggtaggacccaccatcta--ttttttgtttctatctctctccaacttgtaaaactccatatattttgccaaattgagaggatcttcacccc 5763117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 185 - 382
Target Start/End: Complemental strand, 33247279 - 33247086
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||  ||| |||||||||||||| |||||||||||| |||    
T  33247279 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc--gaaaaaaataaaatataattaatgatggtggaacc 33247182  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    || |||||||||| ||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  33247181 catttagtggtagaacccaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 33247086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 178 - 382
Target Start/End: Original strand, 23610559 - 23610761
Alignment:
Q  178 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 277  Q
    |||| |||||||||||||||||| ||||| || |||||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||  |||||||||    
T  23610559 gggttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagatacataaaatcttgaaaaaagtaaaatatatttaatgatgg 23610658  T
Q  278 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 377  Q
    ||||||||||||||||||| |||||||||||||        |||||||||||||||||||||| ||| |||||||||||||  |||||||| ||||||||    
T  23610659 tgggacccacttagtggtatgacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagaggatctt 23610756  T
Q  378 caccc 382  Q
    |||||    
T  23610757 caccc 23610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 197 - 382
Target Start/End: Complemental strand, 3952309 - 3952126
Alignment:
Q  197 ttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggta 296  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||||    
T  3952309 ttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccacttagtggta 3952210  T
Q  297 ggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||         |||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||    
T  3952209 ggacccaccatctattttttt--tgtctatctctctccaacttgccaaactccatttattttgccaaatggagaggatcttcaccc 3952126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 185 - 382
Target Start/End: Complemental strand, 18207191 - 18206996
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| ||  |||||||||| |||||||| |||||||    
T  18207191 gatcctctccatttatgtgtttctcaatttcttcaatttggaaagataaagacacataaaatcttgaaaaaggtaaaatataattaatgatgatgggacc 18207092  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||||||||||||||         |||||||||||||| |||||| ||| || ||||||||||| |||||||| |||||||||||||    
T  18207091 cacttagtggtaggacccaccatctattttttt--tgtctatctctctctaacttgcaaaactacatttattttgtcaaatggagaggatcttcaccc 18206996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 186 - 382
Target Start/End: Complemental strand, 5416617 - 5416422
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa--taaaatataactaatgatggtgggac 283  Q
    |||||||| |||||||||||| || |||||||| ||||||| |||||||||||||||||||||| || ||||  |||||||||| |||||||||||||||    
T  5416617 atcctctcaatttatgtgtttctccatttcttcaatttggacagataaagacacataaaatctttaaaaaaaagtaaaatataattaatgatggtgggac 5416518  T
Q  284 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||||||||| |||||        |||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  5416517 ccacttagtggtaggacccacaatcta---tttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 5416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 183 - 383
Target Start/End: Complemental strand, 38079873 - 38079675
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    ||||||||||||||||||| |||| || |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| |    
T  38079873 aagatcctctccatttatgcgtttctccattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaa 38079774  T
Q  283 cccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
     ||||||||| |||||||||||||||||        ||||||||||||||| |||| | ||| ||||||||||||||  ||||||| |||||||||||||    
T  38079773 tccacttagtagtaggacccaccatcta--tttcttgtgtctatctctctcaaactagcaaaactccatttattttgttaaatggagaggatcttcaccc 38079676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 185 - 304
Target Start/End: Complemental strand, 12241559 - 12241440
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  12241559 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 12241460  T
Q  285 cacttagtggtaggacccac 304  Q
    ||||||||||||||||||||    
T  12241459 cacttagtggtaggacccac 12241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 189 - 382
Target Start/End: Complemental strand, 33262699 - 33262508
Alignment:
Q  189 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 288  Q
    |||||||||||||| ||| || |||||||| ||||||||||||||||||||||||||| || || ||| |||||||||| |||||||||||||||| | |    
T  33262699 ctctccatttatgtatttttctatttcttcaatttggagagataaagacacataaaattttaaaaaaagtaaaatataattaatgatggtgggacctatt 33262600  T
Q  289 tagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||| ||||||||||        ||||||||||||||| |||||| ||| | | |||||||||||||||| || |||||||||||||    
T  33262599 tagtggtaggatccaccatcta--ttttttgtgtctatctctctctaacttgcaaaacacaatttattttgccaaatagagaggatcttcaccc 33262508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 185 - 382
Target Start/End: Original strand, 39862441 - 39862636
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||||||| ||     
T  39862441 gatcctcttcatttatgtgtttctcattttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaact 39862540  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    || |||||| |||||| |||||||||        ||||||||||||||| |||||| |||  || |||||||||  |||||||| |||||||||||||    
T  39862541 catttagtgataggacacaccatcta--ttttttgtgtctatctctctcaaacttgcaaaattctatttattttatcaaatggagaggatcttcaccc 39862636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 12153095 - 12153197
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  12153095 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 12153194  T
Q  285 cac 287  Q
    |||    
T  12153195 cac 12153197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 228 - 368
Target Start/End: Original strand, 30567868 - 30568006
Alignment:
Q  228 agataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatc 327  Q
    ||||||||||||||||||| ||||| ||| |||||||||| |||||||| ||| |||||||||||||||||||||||||||||        |||||||||    
T  30567868 agataaagacacataaaattttgaaaaaagtaaaatataattaatgatgatggaacccacttagtggtaggacccaccatcta--ttttttgtgtctatc 30567965  T
Q  328 tctctccaacttgtaaatctccatttattttgccaaatgga 368  Q
    ||||| ||||||| ||| |||||||||||||||||||||||    
T  30567966 tctcttcaacttgcaaaactccatttattttgccaaatgga 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 240 - 382
Target Start/End: Complemental strand, 12312572 - 12312431
Alignment:
Q  240 ataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaactt 339  Q
    |||||||||| || ||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||         ||||||||||||||||||||    
T  12312572 ataaaatcttaaagaaagtaaaatataattaatgatgatgggacccacttagtggtaggatccaccatctatttttttt-tgtctatctctctccaactt 12312474  T
Q  340 gtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    | ||| ||||||||||||||||||||||| |||||||||||||    
T  12312473 gcaaaactccatttattttgccaaatggagaggatcttcaccc 12312431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 185 - 310
Target Start/End: Complemental strand, 47922226 - 47922101
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    ||||||||| |||||||||||| || |||||||| |||| ||||||||||||||| |||||| ||||| |||||||||||||  |||||||||||| |||    
T  47922226 gatcctctcaatttatgtgtttctccatttcttcaatttagagagataaagacacgtaaaatattgaaaaaaataaaatatatttaatgatggtggaacc 47922127  T
Q  285 cacttagtggtaggacccaccatcta 310  Q
    |||||||||||| ||||||| |||||    
T  47922126 cacttagtggtaagacccactatcta 47922101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 185 - 273
Target Start/End: Original strand, 52018707 - 52018795
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatg 273  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||    
T  52018707 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatg 52018795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 177 - 377
Target Start/End: Complemental strand, 47922526 - 47922327
Alignment:
Q  177 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 276  Q
    ||||| || ||||||||||||||| | |||||| |||||| ||||||| || |||| | ||||| ||| | ||||| ||| ||||| |||| ||  ||||    
T  47922526 cgggtcaaaatcctctccatttatttctttatccatttctaccatttgtagtgatataaacacacaaagttttgaaaaaagtaaaaaataattatagatg 47922427  T
Q  277 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 376  Q
     |||||||||||||||||||||||||||||||||        |||||||| ||||||||| ||| ||| ||| |||||||||  |||||||| |||||||    
T  47922426 atgggacccacttagtggtaggacccaccatcta-ttcttttgtgtctatatctctccaaattgcaaaactcaatttattttagcaaatggagaggatct 47922328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 186 - 310
Target Start/End: Complemental strand, 31862370 - 31862246
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||| |||||| |  || || |||||| ||||||||||||||| ||||||| ||||| ||  | ||| ||||| |||| |||||||||||||||||    
T  31862370 atcctctcaatttatatccttctctatttctaccatttggagagatatagacacacaaaattttagaaaaagtaaaaaataattaatgatggtgggaccc 31862271  T
Q  286 acttagtggtaggacccaccatcta 310  Q
    |||||||||||||| ||||||||||    
T  31862270 acttagtggtaggatccaccatcta 31862246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 17080791 - 17080697
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtg 279  Q
    ||||| |||||||||||||||| || |||||||| ||||||||||||||||||| ||||||||||| | ||| ||||||||||  ||||||||||    
T  17080791 gatcccctccatttatgtgtttctccatttcttcaatttggagagataaagacagataaaatcttggaaaaagtaaaatataatgaatgatggtg 17080697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 12153210 - 12153273
Alignment:
Q  319 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  12153210 gtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12153273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 12312650 - 12312572
Alignment:
Q  189 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataa 267  Q
    |||||||||||||||||| || |||||||| |||| |||||||||||||||||||||| ||||| ||| ||||||||||    
T  12312650 ctctccatttatgtgtttctccatttcttcaatttagagagataaagacacataaaattttgaaaaaagtaaaatataa 12312572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 33524321 - 33524381
Alignment:
Q  322 tctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  33524321 tctatctctctccaacttccaaatctccatttattttgccaaatggagaggatcttcaccc 33524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 310
Target Start/End: Complemental strand, 25442328 - 25442200
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaa-ataaaatataactaatgatggtggg 281  Q
    |||||||||||||||||||   || || |||||||||||||||||||||||||||||| | |||  | || |||  ||||| |||| |||||  |||| |    
T  25442328 aagatcctctccatttatggccttctccatttcttccatttggagagataaagacacacacaattataaaaaaagttaaaaaataattaatgtcggtgag 25442229  T
Q  282 acccacttagtggtaggacccaccatcta 310  Q
    | ||||||||||||||||||||| |||||    
T  25442228 atccacttagtggtaggacccacaatcta 25442200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 52018822 - 52018882
Alignment:
Q  322 tctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||||||||    
T  52018822 tctatctctctccaacttgcaaaactccatttattttgctaaatggagaggatcttcaccc 52018882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 186 - 306
Target Start/End: Complemental strand, 56269217 - 56269106
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||  |          |||| |||| |||||||||||||||||    
T  56269217 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaaagta---------aaaaaataattaatgatggtgggaccc 56269127  T
Q  286 acttagtggtaggacccacca 306  Q
    |||||||||||||||||||||    
T  56269126 acttagtggtaggacccacca 56269106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 375
Target Start/End: Original strand, 1871237 - 1871388
Alignment:
Q  220 atttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnng 319  Q
    ||||||||||||||||||||| | ||  ||||| |||||| || |||| |||||||| ||||||||||||||| |||||| |||| |||||             
T  1871237 atttggagagataaagacacaaagaaatttgaa-aaaatataaaataattaatgatgatgggacccacttagtagtaggatccactatctatattttt-- 1871333  T
Q  320 tgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 375  Q
    ||||||||||||||||| ||| | | |||||||||||||| ||||| || ||||||    
T  1871334 tgtctatctctctccaaattgcata-ctccatttattttgtcaaattgagaggatc 1871388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 306
Target Start/End: Original strand, 5524372 - 5524492
Alignment:
Q  176 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    |||||| || |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||    
T  5524372 acgggtcaatatcctctccatttataaatttttccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgat 5524461  T
Q  276 ggtgggacccacttagtggtaggacccacca 306  Q
    ||||||||||||||| || ||||||||||||    
T  5524462 ggtgggacccacttactgataggacccacca 5524492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 23474062 - 23474231
Alignment:
Q  212 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctan 311  Q
    |||| |||||||||||||||| | ||||| ||||  || || ||| |||||  ||| ||||||||||||||  |||| | | |||||||||||||||||     
T  23474062 tttcatccatttggagagatataaacacacaaaaaattcaaaaaattaaaaagtaattaatgatggtgggattcactcaatagtaggacccaccatcta- 23474160  T
Q  312 nnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 384  Q
           ||||||||||||| |||| ||| | | ||||||||||| ||| ||||||| |||||||| ||||||    
T  23474161 -ttttatgtgtctatctctccccaaattgcata-ctccatttattatgctaaatggagaggatctttacccca 23474231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 286
Target Start/End: Complemental strand, 33841929 - 33841854
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccca 286  Q
    ||||| |||||||||| ||||||||||||| ||||||||||| | | || |  |||| ||||||||||||||||||    
T  33841929 atttcctccatttggaaagataaagacacaaaaaatcttgaaaagagtatacaataattaatgatggtgggaccca 33841854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 186 - 306
Target Start/End: Complemental strand, 37002391 - 37002281
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||||||||||||    
T  37002391 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgatggtgggaccc 37002302  T
Q  286 acttagtggtaggacccacca 306  Q
    |||||||  ||||| ||||||    
T  37002301 acttagtaataggatccacca 37002281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 48084603 - 48084555
Alignment:
Q  258 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 306  Q
    ||||| |||| ||||||||||||||||||||||||| ||| ||||||||    
T  48084603 taaaaaataattaatgatggtgggacccacttagtgctagaacccacca 48084555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 43447697 - 43447638
Alignment:
Q  220 atttggagagataaagacacat-aaaatcttgaacaaaataaaatataactaatgatggt 278  Q
    |||| ||||||||||||||||| ||||| ||||| ||| |||||||||| ||||||||||    
T  43447697 atttcgagagataaagacacataaaaattttgaaaaaagtaaaatataattaatgatggt 43447638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 303
Target Start/End: Original strand, 3326438 - 3326559
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagat-aaagacacataaaatcttgaacaaaataaaatataactaatgatggtggg 281  Q
    ||||||||||||||||||||  |  || |||||||  |||| ||||||| ||||||| | ||| | ||||| ||| ||||| |||| |||| |||||||     
T  3326438 aagatcctctccatttatgtcctcctccatttctttaattttgagagataaaagacaaaaaaagttttgaaaaaagtaaaaaataattaataatggtgga 3326537  T
Q  282 acccacttagtggtaggaccca 303  Q
    ||||| ||| ||||| ||||||    
T  3326538 acccatttaatggtatgaccca 3326559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 25219003 - 25219040
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  25219003 taatgatggtgggatccacttagtgataggacccacca 25219040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 32146510 - 32146547
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  32146510 taatgatggtgggatccacttagtgataggacccacca 32146547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 46238974 - 46239011
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  46238974 taatgatggtgggatccacttagtgataggacccacca 46239011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 53526096 - 53526133
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  53526096 taatgatggtgggatccacttagtgataggacccacca 53526133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 55160438 - 55160401
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  55160438 taatgatggtgggatccacttagtgataggacccacca 55160401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 36688260 - 36688224
Alignment:
Q  264 ataactaatgatggtgggacccacttagtggtaggac 300  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  36688260 ataattaatgatggtgggacccacttagtgataggac 36688224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 42010114 - 42010158
Alignment:
Q  258 taaaatataactaatgatggtgggacccacttagtggtaggaccc 302  Q
    ||||| |||| |||||||||||||||||| |||||| ||||||||    
T  42010114 taaaaaataattaatgatggtgggacccatttagtgataggaccc 42010158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 56453886 - 56453850
Alignment:
Q  270 aatgatggtgggacccacttagtggtaggacccacca 306  Q
    ||||||||||||||||||||| || ||||||||||||    
T  56453886 aatgatggtgggacccacttaatgataggacccacca 56453850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 122; Significance: 3e-62; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 185 - 383
Target Start/End: Original strand, 207987 - 208183
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||| |||||||    
T  207987 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggacc 208086  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 383  Q
    ||||||||||||||||||||||||||        |||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  208087 cacttagtggtaggacccaccatcta--ttttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 208183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 6e-57; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 185 - 382
Target Start/End: Complemental strand, 43720098 - 43719903
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||| ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  43720098 gatcttctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaaataaaatataattaatgatggtgggacc 43719999  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    |||||||||||||||||||| || ||        |||||||||||||||||||||| ||| ||||||||||||||  ||||||| |||||||||||||    
T  43719998 cacttagtggtaggacccacaattta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgttaaatggagaggatcttcaccc 43719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 178 - 382
Target Start/End: Complemental strand, 19830591 - 19830387
Alignment:
Q  178 gggtgaagatcctctccattt-atgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgat 275  Q
    |||| |||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||||||||||| || |||  |||||||||| |||||||    
T  19830591 gggttaagatcctctccattttatgtgtttttccatttcttcaatttggagagataaagacacataaaatctttaaaaaaggtaaaatataattaatgat 19830492  T
Q  276 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 375  Q
    ||||||||||||||| |||||||||||||||||||        |||||||| |||| |||||||| ||| ||||||||||||||||||||||| ||||||    
T  19830491 ggtgggacccacttaatggtaggacccaccatcta--ttttttgtgtctatttctccccaacttgcaaaactccatttattttgccaaatggagaggatc 19830394  T
Q  376 ttcaccc 382  Q
    |||||||    
T  19830393 ttcaccc 19830387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 176 - 382
Target Start/End: Original strand, 2229898 - 2230102
Alignment:
Q  176 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    |||||| | |||||||| ||||||||||||| || |||||||  ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  2229898 acgggttaggatcctcttcatttatgtgtttctctatttctttaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgat 2229997  T
Q  276 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 375  Q
    ||||| | |||||||||||||||||||| ||||||        |||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||     
T  2229998 ggtggaaaccacttagtggtaggacccatcatcta--ttttttgtgtctatctctctccaacttgcaaaactccaattattttgccaaatggagaggatg 2230095  T
Q  376 ttcaccc 382  Q
    |||||||    
T  2230096 ttcaccc 2230102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 201 - 382
Target Start/End: Original strand, 27033591 - 27033770
Alignment:
Q  201 gtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggac 300  Q
    |||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  27033591 gtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggatccacttagtggtaggac 27033690  T
Q  301 ccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||        |||||||||||||||||||||| ||| |||||||||||||  |||||||| | |||||||||||    
T  27033691 ccaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 27033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 185 - 382
Target Start/End: Original strand, 34373755 - 34373950
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    ||||||||||||  |||||||| |  |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  34373755 gatcctctccatcaatgtgtttcttcattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 34373854  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
     | |||||||||||||||||||||||        |||||||||||||||||||||| ||| | | ||||||||||||||||||| || ||||||||||    
T  34373855 taattagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacacaatttattttgccaaatggagagaatcttcaccc 34373950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 185 - 380
Target Start/End: Original strand, 40851697 - 40851891
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatat-aactaatgatggtgggac 283  Q
    |||||||||||||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |  |||||||||| ||||    
T  40851697 gatcctctccatttatgtatttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatatgatttaatgatggtaggac 40851796  T
Q  284 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcac 380  Q
    |||||||||||| | ||||||||||||        |||||||||| ||||||||||| ||| |||||||||||||| ||||| || |||||||||||    
T  40851797 ccacttagtggttgaacccaccatcta--ttttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgagaggatcttcac 40851891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 190 - 364
Target Start/End: Complemental strand, 34373731 - 34373559
Alignment:
Q  190 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 289  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||| ||| ||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  34373731 tctccatttatgtgtttctccatttcttcaatttggagagataaagagacaaaaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 34373632  T
Q  290 agtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaa 364  Q
    |||||||||||||||||||||        |||||||||||| |  |||||| ||| ||| |||||||||||||||    
T  34373631 agtggtaggacccaccatcta--tttttagtgtctatctctatggaacttgcaaaactctatttattttgccaaa 34373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 190 - 379
Target Start/End: Original strand, 46167322 - 46167509
Alignment:
Q  190 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 289  Q
    ||||||||||||||||| || |||||||| |||| |||||||||||||| ||| ||||||||| ||| |||||||||| |||| ||||| ||| ||||||    
T  46167322 tctccatttatgtgtttttccatttcttcaatttagagagataaagacaaatataatcttgaaaaaagtaaaatataattaataatggtaggatccactt 46167421  T
Q  290 agtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 379  Q
    |||||||||||||||||| ||        |||||||||||||||||||||  ||| ||||||||||||||| ||||||| ||||| ||||    
T  46167422 agtggtaggacccaccatata--ttttttgtgtctatctctctccaacttacaaaactccatttattttgctaaatggagaggatgttca 46167509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 186 - 382
Target Start/End: Original strand, 48084744 - 48084939
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||||||||||||  || || |||||| ||||||||||||||| ||||||| ||||| ||||| ||||||||| |||| |||||||| ||||||||    
T  48084744 atcctctccatttatgtccttctccatttctaccatttggagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 48084843  T
Q  286 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    |||||||||| ||||||||||||||        ||||||||||||| |||| ||| ||| ||| |||||||||  |||||||| |||||||| ||||    
T  48084844 acttagtggttggacccaccatcta-ttcttttgtgtctatctctccccaaattgcaaaactcaatttattttagcaaatggagaggatcttaaccc 48084939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 183 - 310
Target Start/End: Complemental strand, 550969 - 550842
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    |||||||||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||| || || ||| |||||||||| |||| |||||||||    
T  550969 aagatcctctccatttatgtctttctccatttcttccatttggagagataaagatacataaaatttttaaaaaagtaaaatataaataataatggtggga 550870  T
Q  283 cccacttagtggtaggacccaccatcta 310  Q
    |||||||| || ||||| ||||||||||    
T  550869 cccacttaatgataggatccaccatcta 550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 277 - 382
Target Start/End: Original strand, 24754673 - 24754776
Alignment:
Q  277 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 376  Q
    ||||||||||||||||||||||||  ||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  24754673 gtgggacccacttagtggtaggacataccatctattttgt--gtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatct 24754770  T
Q  377 tcaccc 382  Q
    ||||||    
T  24754771 tcaccc 24754776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 277 - 382
Target Start/End: Original strand, 24763670 - 24763773
Alignment:
Q  277 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 376  Q
    ||||||||||||||||||||||||  ||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  24763670 gtgggacccacttagtggtaggacataccatctattttgt--gtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatct 24763767  T
Q  377 tcaccc 382  Q
    ||||||    
T  24763768 tcaccc 24763773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 189 - 310
Target Start/End: Original strand, 12402893 - 12403015
Alignment:
Q  189 ctctccatttatgtgtttat-caatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggaccca 286  Q
    |||||||||||||||||| | || ||||||  |||||||||||||||||||||||||||||| || |||| |||||||||| |||| |||||||||| ||    
T  12402893 ctctccatttatgtgtttcttcattttctta-atttggagagataaagacacataaaatcttaaaaaaaagtaaaatataattaataatggtgggactca 12402991  T
Q  287 cttagtggtaggacccaccatcta 310  Q
    ||||||||||| | ||||||||||    
T  12402992 cttagtggtagaatccaccatcta 12403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 188 - 366
Target Start/End: Complemental strand, 566925 - 566746
Alignment:
Q  188 cctctccatttatgtgtttatc----aatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggac 283  Q
    ||||| ||||||||| ||||||    ||||||||||||||||||||||||| | ||||||||||||||| ||| |||||||||| |||| | ||||||||    
T  566925 cctcttcatttatgtctttatccattaatttcttccatttggagagataaaaatacataaaatcttgaa-aaagtaaaatataaataataaaggtgggac 566827  T
Q  284 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatg 366  Q
    ||||||| || ||||| || |||| ||        || ||||||||||||||| ||| ||| |||||||||||||||||||||    
T  566826 ccacttaatgataggatccgccatata-tttttttgtatctatctctctccaaattgcaaa-ctccatttattttgccaaatg 566746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 310
Target Start/End: Complemental strand, 40810505 - 40810382
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacc 284  Q
    ||||||||||||||||| ||| || ||||||  |||| ||||||||| | |||||  |||| ||||| |||| ||||| |||| |||||||| |||||||    
T  40810505 atcctctccatttatgtctttttccatttctatcattaggagagatataaacaca--aaattttgaaaaaaaataaaaaataattaatgatgatgggacc 40810408  T
Q  285 cacttagtggtaggacccaccatcta 310  Q
    |||||||||||  |||||||||||||    
T  40810407 cacttagtggttagacccaccatcta 40810382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 52859534 - 52859433
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaa-aataaaatataactaatgatggtggg 281  Q
    ||||| |||| ||||||||| ||| || |||||| ||||||||||| ||||| |||||||||||||| || || | |||||||||| ||||||| |||||    
T  52859534 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatcttaaaaaagagtaaaatataattaatgattgtggg 52859435  T
Q  282 ac 283  Q
    ||    
T  52859434 ac 52859433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 306
Target Start/End: Complemental strand, 31523817 - 31523698
Alignment:
Q  177 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 276  Q
    ||||| || |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  31523817 cgggtcaatatcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 31523728  T
Q  277 gtgggacccacttagtggtaggacccacca 306  Q
    ||||||||||||||||  ||||||||||||    
T  31523727 gtgggacccacttagtaataggacccacca 31523698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 306
Target Start/End: Original strand, 42613015 - 42613125
Alignment:
Q  186 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 285  Q
    |||||||||||||||   ||| || |||| ||| |||| |||||||||||||||||||||          | ||||| |||| |||||||||||||||||    
T  42613015 atcctctccatttataaatttctccatttgttctatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggaccc 42613104  T
Q  286 acttagtggtaggacccacca 306  Q
    |||||||| ||||||||||||    
T  42613105 acttagtgataggacccacca 42613125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 2310233 - 2310330
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    |||||| |||||||||| ||| ||||  ||||||||||||| |||||||||||||||  ||||| || || ||| ||||| |||| |||||||| |||||    
T  2310233 aagatcatctccatttacgtgcttatttatttcttccatttagagagataaagacac--aaaattttaaagaaagtaaaaaataattaatgatgatggga 2310330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 24647905 - 24647957
Alignment:
Q  330 tctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  24647905 tctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 24647957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 3009171 - 3009233
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 245  Q
    ||||||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||    
T  3009171 aagatcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 3009233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 567043 - 566988
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagaca 238  Q
    |||||||||| |||||||  || ||| |||||||| ||||||||||||||||||||    
T  567043 aagatcctcttcatttattagtctattaatttctttcatttggagagataaagaca 566988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 32577482 - 32577528
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaat 258  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  32577482 atttcttctatttggagagataaagacaca-aaaatcttgaaaaaaat 32577528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 20485870 - 20485808
Alignment:
Q  184 agatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaat 246  Q
    ||||||||||||||||  | ||| || |||||| ||||||||||||||| | |||||||||||    
T  20485870 agatcctctccatttaaatttttctccatttctaccatttggagagatataaacacataaaat 20485808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 49289104 - 49289042
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 245  Q
    |||||| ||| ||||||||| ||| || |||| || |||||||||| ||||||||||||||||    
T  49289104 aagatcatcttcatttatgtttttctccatttgtttcatttggagaaataaagacacataaaa 49289042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 302
Target Start/End: Complemental strand, 49679419 - 49679304
Alignment:
Q  177 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 276  Q
    ||||| || |||||||||||||||   ||| || |||| || ||||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  49679419 cgggtcaatatcctctccatttataaatttctccatttgtttcatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 49679330  T
Q  277 gtgggacccacttagtggtaggaccc 302  Q
    |||||||||| |||||| ||||||||    
T  49679329 gtgggacccatttagtgataggaccc 49679304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 111; Significance: 9e-56; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 180 - 382
Target Start/End: Complemental strand, 9354 - 9157
Alignment:
Q  180 gtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtg 279  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| || |||||  ||||||| |||||||||||    
T  9354 gtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaaggcacatgaaatctt-aaaaaaat--aatataattaatgatggtg 9258  T
Q  280 ggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 379  Q
    | | |||||||||||| ||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  9257 gaatccacttagtggttggacccaccatcta--ttttctgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatcttca 9160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 185 - 384
Target Start/End: Complemental strand, 16548 - 16351
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    ||||||||| |||||||||||| || |||||||| |||||||||||||||   ||||||||||||||| |||||||||||||| |||||||| |||||||    
T  16548 gatcctctcaatttatgtgtttctccatttcttcaatttggagagataaaattacataaaatcttgaaaaaaataaaatataattaatgatgatgggacc 16449  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 384  Q
    ||||||||||||||||||||||| ||        |||||||||||||||||||||| ||| |||||||||||||||| || ||| |||||||||||||||    
T  16448 cacttagtggtaggacccaccattta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgcctaacggagaggatcttcacccca 16351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 185 - 382
Target Start/End: Original strand, 7071 - 7270
Alignment:
Q  185 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 284  Q
    |||||||||||||||||||||| |  |||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||    
T  7071 gatcctctccatttatgtgtttcttcatttcttcaatttgcagagataaagacatataaaatcttgaaaaaaataaaatataattaatgatggtggaacc 7170  T
Q  285 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctcc----atttattttgccaaatggacaggatcttcac 380  Q
    |||||| | |||||||||||||||||        |||||||||||||||||||||| ||| ||||    ||||||||||||||||||| |||||||||||    
T  7171 cacttaatagtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttatttattttgccaaatggagaggatcttcac 7268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 189 - 287
Target Start/End: Complemental strand, 73987 - 73889
Alignment:
Q  189 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 287  Q
    |||||||||||||||||| || |||||||| |||| |||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  73987 ctctccatttatgtgtttctccatttcttcaatttagagagataaaaacacataaaatcttgaaaaaaataaaatataattaatgatgatgggacccac 73889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 73874 - 73817
Alignment:
Q  321 gtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttc 378  Q
    |||||||||||||||||||| ||| | |||||||||||||||||| || |||||||||    
T  73874 gtctatctctctccaacttgcaaaacaccatttattttgccaaatagagaggatcttc 73817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 13646 - 13722
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 287  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  13646 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 13722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 13737 - 13799
Alignment:
Q  320 tgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 382  Q
    ||||||||||||||||||| | ||| ||| ||||||||||||||||||| | |||||||||||    
T  13737 tgtctatctctctccaactagcaaaactctatttattttgccaaatggagaagatcttcaccc 13799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 183 - 310
Target Start/End: Complemental strand, 22595 - 22468
Alignment:
Q  183 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 282  Q
    |||||| ||||||||||||| | | || ||||||| ||||| |||||||||| ||||||||||||||||| ||| |||||||||| |||| || |||| |    
T  22595 aagatcttctccatttatgtctatctccatttcttacatttagagagataaatacacataaaatcttgaaaaaagtaaaatataattaattattgtggaa 22496  T
Q  283 cccacttagtggtaggacccaccatcta 310  Q
    | ||||||||||||||| |||| |||||    
T  22495 ctcacttagtggtaggatccactatcta 22468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 6559 - 6461
Alignment:
Q  212 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 310  Q
    ||||||| |||| |||||||||||||||||||||||||| | ||| |||||||||| |||||||||| | ||||| ||||| |||||||||||||||||    
T  6559 tttcttcaattttgagagataaagacacataaaatcttggaaaaagtaaaatataattaatgatggttgtacccatttagttgtaggacccaccatcta 6461  T

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Target: scaffold0171 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 17456 - 17339
Alignment:
Q  176 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 275  Q
    |||||| || |||||||||||||||   ||| |  |||| |||||||| |||||||||||||||||||||          | ||||| |||| |||||||    
T  17456 acgggtcaatatcctctccatttataaatttcttcatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgat 17367  T
Q  276 ggtgggacccacttagtggtaggaccca 303  Q
    |||||||||||||||||| |||||||||    
T  17366 ggtgggacccacttagtgataggaccca 17339  T

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Target: scaffold0664 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 4768 - 4731
Alignment:
Q  269 taatgatggtgggacccacttagtggtaggacccacca 306  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  4768 taatgatggtgggatccacttagtgataggacccacca 4731  T

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Target: scaffold0468 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 5560 - 5632
Alignment:
Q  211 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggac 283  Q
    |||||||||||||||||||||||||||| | | ||  ||||| ||| || || |||| |||||||| ||||||    
T  5560 atttcttccatttggagagataaagacataaagaagtttgaaaaaagtataaaataattaatgatgatgggac 5632  T

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