View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16257_low_25 (Length: 256)
Name: NF16257_low_25
Description: NF16257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16257_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 117 - 250
Target Start/End: Complemental strand, 46892030 - 46891898
Alignment:
| Q |
117 |
tgaggctggagtgtgaggagggttccatgtgaaatttagaatgtttggatggtagactagccaatgttcaaggattctgccaatggggttttccattaac |
216 |
Q |
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| T |
46892030 |
tgaggctggagtgtgaggagggttccatgtgaaatttagaatgtttggatggtagactagccaatgttcaaggattctgccaatggggttttccattcac |
46891931 |
T |
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| Q |
217 |
ctcttttttgggtttgggggagaagtgcctttgt |
250 |
Q |
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| T |
46891930 |
ctc-tttttgggtttgggggagaagtgcctttgt |
46891898 |
T |
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