View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16258_low_25 (Length: 245)

Name: NF16258_low_25
Description: NF16258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16258_low_25
NF16258_low_25
[»] chr1 (31 HSPs)
chr1 (18-161)||(32910353-32910497)
chr1 (19-152)||(36203423-36203562)
chr1 (18-161)||(3935411-3935555)
chr1 (23-103)||(8165535-8165620)
chr1 (22-161)||(11074382-11074526)
chr1 (30-134)||(33769859-33769964)
chr1 (19-155)||(50471187-50471324)
chr1 (19-161)||(12973514-12973662)
chr1 (19-161)||(17989002-17989150)
chr1 (19-110)||(26345038-26345134)
chr1 (50-152)||(16537853-16537956)
chr1 (48-152)||(21685556-21685661)
chr1 (19-152)||(25559980-25560115)
chr1 (50-161)||(52828777-52828888)
chr1 (75-161)||(8268611-8268699)
chr1 (22-134)||(9962135-9962248)
chr1 (22-154)||(18309961-18310094)
chr1 (30-158)||(52380718-52380847)
chr1 (50-161)||(27507507-27507619)
chr1 (19-161)||(40095401-40095549)
chr1 (49-148)||(50153376-50153476)
chr1 (50-152)||(34914097-34914200)
chr1 (19-60)||(35992586-35992627)
chr1 (22-148)||(17651719-17651851)
chr1 (26-62)||(44055783-44055819)
chr1 (50-152)||(2490044-2490147)
chr1 (35-152)||(16062826-16062944)
chr1 (31-152)||(47984498-47984619)
chr1 (19-56)||(8268701-8268738)
chr1 (50-95)||(10847543-10847588)
chr1 (70-161)||(16529536-16529628)
[»] chr8 (22 HSPs)
chr8 (19-161)||(40436390-40436534)
chr8 (19-161)||(9012822-9012960)
chr8 (48-152)||(24682105-24682209)
chr8 (48-161)||(44336726-44336841)
chr8 (53-159)||(7428452-7428559)
chr8 (18-160)||(19539338-19539476)
chr8 (70-161)||(14549178-14549270)
chr8 (19-152)||(33565918-33566059)
chr8 (48-150)||(36340774-36340877)
chr8 (48-152)||(4785199-4785304)
chr8 (19-60)||(15272286-15272327)
chr8 (19-60)||(15452655-15452696)
chr8 (55-161)||(22811194-22811301)
chr8 (80-136)||(8036022-8036079)
chr8 (70-161)||(10661108-10661200)
chr8 (23-98)||(31497583-31497663)
chr8 (25-152)||(45366271-45366399)
chr8 (70-152)||(33068229-33068312)
chr8 (17-87)||(13325328-13325398)
chr8 (48-152)||(11218913-11219018)
chr8 (45-94)||(30254137-30254186)
chr8 (46-94)||(37162656-37162704)
[»] chr4 (34 HSPs)
chr4 (26-161)||(5122376-5122512)
chr4 (25-152)||(48338305-48338432)
chr4 (19-161)||(36106404-36106548)
chr4 (22-152)||(45983347-45983473)
chr4 (19-152)||(48293395-48293524)
chr4 (22-136)||(15723861-15723981)
chr4 (19-134)||(18396310-18396426)
chr4 (48-148)||(20986389-20986490)
chr4 (23-161)||(40806807-40806946)
chr4 (22-161)||(32223302-32223447)
chr4 (27-152)||(42198753-42198873)
chr4 (19-83)||(18319551-18319615)
chr4 (19-83)||(18399066-18399130)
chr4 (26-145)||(28147750-28147870)
chr4 (75-134)||(8691491-8691550)
chr4 (19-152)||(23625881-23626020)
chr4 (19-154)||(40494385-40494520)
chr4 (19-98)||(48602509-48602583)
chr4 (26-149)||(23449981-23450100)
chr4 (19-117)||(8311883-8311982)
chr4 (48-150)||(19753535-19753638)
chr4 (48-150)||(19786168-19786271)
chr4 (79-152)||(10218642-10218716)
chr4 (48-161)||(23120271-23120385)
chr4 (23-108)||(4688685-4688770)
chr4 (19-149)||(18536624-18536760)
chr4 (30-161)||(40900079-40900211)
chr4 (70-161)||(43630532-43630624)
chr4 (48-134)||(1566109-1566196)
chr4 (24-121)||(8484660-8484763)
chr4 (67-152)||(4642385-4642471)
chr4 (68-129)||(46471426-46471488)
chr4 (50-121)||(49640841-49640914)
chr4 (19-107)||(21069055-21069148)
[»] scaffold0204 (2 HSPs)
scaffold0204 (25-152)||(25827-25954)
scaffold0204 (19-161)||(14477-14619)
[»] chr2 (22 HSPs)
chr2 (19-152)||(44085452-44085582)
chr2 (19-161)||(12041580-12041717)
chr2 (20-150)||(13193864-13193995)
chr2 (19-152)||(27301469-27301603)
chr2 (19-152)||(28790469-28790603)
chr2 (19-152)||(41461045-41461179)
chr2 (49-140)||(5862646-5862738)
chr2 (19-161)||(17762696-17762839)
chr2 (19-103)||(30759628-30759717)
chr2 (22-149)||(30761744-30761872)
chr2 (19-82)||(36500622-36500685)
chr2 (19-103)||(1331023-1331102)
chr2 (18-93)||(10242732-10242807)
chr2 (31-148)||(4657699-4657817)
chr2 (18-98)||(11678015-11678093)
chr2 (18-98)||(11695493-11695571)
chr2 (70-161)||(44979805-44979897)
chr2 (70-134)||(11375883-11375948)
chr2 (53-161)||(15320598-15320707)
chr2 (29-82)||(20985896-20985949)
chr2 (70-152)||(44035269-44035353)
chr2 (50-140)||(33426547-33426639)
[»] chr7 (34 HSPs)
chr7 (19-133)||(46147198-46147313)
chr7 (19-150)||(48642745-48642882)
chr7 (19-160)||(37375273-37375421)
chr7 (19-134)||(23729369-23729485)
chr7 (48-152)||(32942093-32942198)
chr7 (19-161)||(8568534-8568682)
chr7 (51-134)||(20334565-20334649)
chr7 (19-161)||(40848805-40848953)
chr7 (48-140)||(23032649-23032742)
chr7 (18-99)||(43202446-43202526)
chr7 (19-134)||(524856-524967)
chr7 (50-152)||(8118296-8118399)
chr7 (19-152)||(11399081-11399221)
chr7 (23-159)||(13852265-13852402)
chr7 (19-161)||(30079572-30079715)
chr7 (49-140)||(31287794-31287886)
chr7 (48-148)||(49011217-49011317)
chr7 (19-110)||(26524926-26525017)
chr7 (48-150)||(35820101-35820204)
chr7 (22-92)||(10338799-10338869)
chr7 (70-161)||(10069148-10069240)
chr7 (23-133)||(24361488-24361594)
chr7 (23-60)||(6880090-6880127)
chr7 (23-134)||(27456341-27456457)
chr7 (70-154)||(31983032-31983117)
chr7 (23-82)||(20306645-20306704)
chr7 (45-152)||(30855058-30855159)
chr7 (19-60)||(7697345-7697386)
chr7 (30-103)||(12117613-12117686)
chr7 (50-149)||(16535759-16535859)
chr7 (50-149)||(16629803-16629903)
chr7 (50-98)||(21237792-21237840)
chr7 (48-152)||(29211663-29211767)
chr7 (35-98)||(32237666-32237730)
[»] chr3 (26 HSPs)
chr3 (22-152)||(17144713-17144848)
chr3 (22-161)||(38651982-38652116)
chr3 (19-161)||(55467627-55467770)
chr3 (26-152)||(42363213-42363344)
chr3 (48-140)||(54121996-54122089)
chr3 (19-152)||(26758187-26758326)
chr3 (19-97)||(50578988-50579065)
chr3 (19-152)||(20846433-20846573)
chr3 (50-161)||(44650918-44651030)
chr3 (35-161)||(45629147-45629274)
chr3 (49-134)||(26291971-26292057)
chr3 (36-134)||(38680788-38680886)
chr3 (19-100)||(37045326-37045406)
chr3 (49-152)||(10481660-10481764)
chr3 (19-152)||(2566315-2566449)
chr3 (19-161)||(2832374-2832527)
chr3 (22-110)||(51191711-51191799)
chr3 (23-152)||(8557942-8558077)
chr3 (70-152)||(21586879-21586962)
chr3 (19-98)||(52632057-52632131)
chr3 (18-95)||(25465821-25465898)
chr3 (25-104)||(27054087-27054166)
chr3 (22-60)||(4554747-4554785)
chr3 (19-60)||(5681485-5681526)
chr3 (30-110)||(35402201-35402281)
chr3 (105-161)||(37044875-37044931)
[»] chr5 (25 HSPs)
chr5 (19-161)||(27572025-27572173)
chr5 (19-110)||(14652459-14652550)
chr5 (48-152)||(25495048-25495153)
chr5 (22-95)||(6633341-6633414)
chr5 (48-152)||(35240838-35240943)
chr5 (19-83)||(18845545-18845609)
chr5 (28-150)||(32244370-32244493)
chr5 (19-152)||(2588938-2589067)
chr5 (23-149)||(20191968-20192095)
chr5 (19-138)||(11402569-11402692)
chr5 (19-149)||(22747553-22747688)
chr5 (70-161)||(30265827-30265919)
chr5 (19-98)||(41454882-41454966)
chr5 (48-126)||(17132104-17132183)
chr5 (50-160)||(40884286-40884397)
chr5 (18-133)||(28224848-28224964)
chr5 (19-145)||(36567692-36567814)
chr5 (49-148)||(40692463-40692561)
chr5 (79-161)||(42544613-42544696)
chr5 (22-60)||(6595039-6595077)
chr5 (70-154)||(12166200-12166284)
chr5 (22-59)||(32721658-32721695)
chr5 (18-66)||(38176464-38176511)
chr5 (18-66)||(38203688-38203735)
chr5 (54-98)||(40331510-40331554)
[»] chr6 (18 HSPs)
chr6 (49-161)||(19135127-19135241)
chr6 (19-152)||(32190650-32190789)
chr6 (22-152)||(28610580-28610712)
chr6 (19-152)||(9686021-9686150)
chr6 (25-161)||(31945420-31945552)
chr6 (19-145)||(22413808-22413940)
chr6 (19-152)||(24644943-24645071)
chr6 (19-110)||(14940562-14940648)
chr6 (19-108)||(12108549-12108638)
chr6 (50-161)||(29048081-29048193)
chr6 (65-148)||(25006362-25006446)
chr6 (22-132)||(28632918-28633034)
chr6 (30-161)||(6266858-6266985)
chr6 (48-134)||(29128970-29129057)
chr6 (75-133)||(30752513-30752572)
chr6 (45-134)||(892352-892442)
chr6 (70-161)||(10590805-10590897)
chr6 (70-161)||(35040246-35040338)
[»] scaffold0015 (1 HSPs)
scaffold0015 (48-150)||(62365-62468)
[»] scaffold0688 (2 HSPs)
scaffold0688 (79-158)||(1116-1195)
scaffold0688 (79-158)||(7685-7764)
[»] scaffold0664 (1 HSPs)
scaffold0664 (23-60)||(6057-6094)
[»] scaffold0470 (1 HSPs)
scaffold0470 (48-98)||(6259-6309)


Alignment Details
Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 32910353 - 32910497
Alignment:
Q  18 acaccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatctta 116  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||     
T  32910353 acaccaaccgatccaacacaaaccgcatttgtttgttttggttcagattctatttttaaagtcaaccgaaccaaaccaaactgcatgtttttttatcttg 32910452  T
Q  117 cggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    | |||| ||||||||||| ||||| |||||||||||| |||||||    
T  32910453 cagtttggatgacttttatcctcaaaaccgaaccaacacacaccg 32910497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 36203423 - 36203562
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcag-----attctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttat 112  Q
    |||||||| ||||||||||||||||||| |||||||||||||| |     ||| |||||| ||||||||||||| |||| ||||| ||||  ||||||||    
T  36203423 caccaaccaatccaacccaaaccgcattagtttggtttggttcggttcggattgtattttaaaagtcaaccgaaccaaatcaaaccgcatgcttttttat 36203522  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    ||| |||||| ||||||||||| ||||| |||||||||||    
T  36203523 cttgcggtttggatgacttttaacctcaaaaccgaaccaa 36203562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 3935555 - 3935411
Alignment:
Q  18 acaccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatctta 116  Q
    |||||||| |||||||  ||||||| |||  |||  |||||||| |||| |||||| ||||||||||||||||||||| |||||||| || |||||||||    
T  3935555 acaccaactgatccaattcaaaccgtattaatttaatttggttcggattttattttaaaagtcaaccgaatcaaaccatactgcatacttatttatctta 3935456  T
Q  117 cggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||||| | ||||||||||  |||| || |||||||| || |||||    
T  3935455 cggttcatatgacttttagtctcaaaatcgaaccaaaccgcaccg 3935411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 8165535 - 8165620
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgttt-----ggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat 103  Q
    |||||||||||||||||||||||||||||     ||||||||||||||| |||||||||||||||||||| | |||||||| ||||    
T  8165535 aaccgatccaacccaaaccgcatttgtttggtttggtttggttcagattttatttttaaagtcaaccgaaccgaaccaaaccgcat 8165620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 11074382 - 11074526
Alignment:
Q  22 caaccgatccaacccaaaccgca-----tttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatctt 115  Q
    |||||||||||| ||||||||||     || |||||||| |||||||||| |||||||||||||||||||| |||||||||| | ||  |||||||||||    
T  11074382 caaccgatccaatccaaaccgcattgatttggtttggttaggttcagattttatttttaaagtcaaccgaaccaaaccaaaccgtatgtttttttatctt 11074481  T
Q  116 acggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    | ||||  || |||||||||||||| || |||||||| || |||||    
T  11074482 aaggttcggaagacttttaccctca-aatcgaaccaaaccgcaccg 11074526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 134
Target Start/End: Complemental strand, 33769964 - 33769859
Alignment:
Q  30 ccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatga 128  Q
    |||| |||||||||||| |||||||||||||||| ||  ||||| |||| ||||||||||||||||||| |||||  |||||||| || ||||  |||||    
T  33769964 ccaatccaaaccgcattggtttggtttggttcagttttcattttgaaaggcaaccgaatcaaaccaaaccgcatacatttttatcatatggttcggatga 33769865  T
Q  129 ctttta 134  Q
    ||||||    
T  33769864 ctttta 33769859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 50471324 - 50471187
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttac 117  Q
    |||||||||||| || | |||||||||| |||||||||||||  |||| |||||| |||  |||| ||| |||||||||| ||||| |||||||| ||||    
T  50471324 caccaaccgatctaatctaaaccgcattggtttggtttggtttggattttattttaaaatgcaactgaaccaaaccaaaccgcatacttttttattttac 50471225  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaaccc 155  Q
    ||||  ||||||||||| | ||| || ||||| |||||    
T  50471224 ggttcggatgacttttagcatcaaaatcgaacaaaccc 50471187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 12973662 - 12973514
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggtt-----cagattctatttttaaagtcaaccgaatcaaaccaaactgcatattt-tttat 112  Q
    ||||||||||||||| ||||||| |||| |||||||||||||     | |||| |||||| ||| |||||| || |||||||||| |||||||| |||||    
T  12973662 caccaaccgatccaatccaaaccacattagtttggtttggtttgattcggattttattttcaaaatcaaccaaaccaaaccaaaccgcatatttatttat 12973563  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||| |||||  ||||||||| | | ||| ||||||||||| || |||||    
T  12973562 cttgcggttcggatgactttcagcttcaaaaccgaaccaaaccgcaccg 12973514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 17989150 - 17989002
Alignment:
Q  19 caccaaccgatccaacccaaa-ccgcatttgtttggttt-----ggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttat 112  Q
    ||||||| ||||||||||||| |||||||  ||||||||     ||||| |||| |||||| ||||||||||||| |||| ||||| | ||  |||||||    
T  17989150 caccaacagatccaacccaaaaccgcattgatttggtttaggttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgtatggtttttat 17989051  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||| || || |||||||||||| ||||| ||||||||||| || |||||    
T  17989050 cttgcgattcagatgacttttagcctcaaaaccgaaccaaaccgcaccg 17989002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 26345038 - 26345134
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggttt-----ggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttttt 110  Q
    ||||||||||||||| |||||||||||| |||||||||     ||||| |||| |||||| ||||||||||||||||||| |||| ||||| |||||    
T  26345038 caccaaccgatccaatccaaaccgcattggtttggttttgtttggttcggattttattttaaaagtcaaccgaatcaaactaaaccgcatacttttt 26345134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 16537853 - 16537956
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttt-ttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    |||||||||||| |||| |||||| ||||| |||| || |||| ||||| |||| |||| ||||||| |||||||||||||||||||| ||| || ||||    
T  16537853 ttggtttggttcggattttattttaaaagtgaaccaaaccaaatcaaaccgcatgtttttttatcttgcggtttagatgacttttaccttcaaaatcgaa 16537952  T
Q  149 ccaa 152  Q
    ||||    
T  16537953 ccaa 16537956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 21685556 - 21685661
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    |||||||||||||| |||| |||||| ||||||||| ||| |||||||||| ||||   ||| |||||| ||||| |||||||||||| ||| | |||||    
T  21685556 gtttggtttggttctgattttattttaaaagtcaactgaaccaaaccaaaccgcatgcatttgtatcttgcggttcagatgacttttagccttaaaaccg 21685655  T
Q  147 aaccaa 152  Q
    ||||||    
T  21685656 aaccaa 21685661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 25559980 - 25560115
Alignment:
Q  19 caccaaccgatccaacccaaaccgca-----tttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttat 112  Q
    |||||||||||||||  |||||||||     ||||||||||||||||| |||| |||||| ||||||||||||| |   |||||| ||||| ||||||||    
T  25559980 caccaaccgatccaattcaaaccgcattggttttgtttggtttggttcggatt-tattttaaaagtcaaccgaacc---ccaaaccgcatacttttttat 25560075  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||||||||   |||||||||| ||||| || ||||||||    
T  25560076 cttacggttcgaatgacttttaacctcaaaatcgaaccaa 25560115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 52828888 - 52828777
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    ||||||||||||||||| |||||| ||||||||||| | |||||||||| ||||  ||| ||||||| ||||| ||||||| |||| ||| | |||||||    
T  52828888 ttggtttggttcagattttattttaaaagtcaaccg-accaaaccaaacagcatgctttgttatcttgcggttcagatgacctttaaccttaaaaccgaa 52828790  T
Q  149 ccaacccacaccg 161  Q
    |||| ||| ||||    
T  52828789 ccaaaccaaaccg 52828777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 8268699 - 8268611
Alignment:
Q  75 aaagtcaaccgaatcaaaccaaactgcatatttt--ttatcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||||||||| || |||||||| | |||||||||  ||||||| ||||| |||||||||||| ||||| ||||||||||| || |||||    
T  8268699 aaagtcaaccaaaccaaaccaacccgcatattttgtttatcttgcggttcagatgacttttagcctcaaaaccgaaccaaaccgcaccg 8268611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 9962135 - 9962248
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggt 120  Q
    |||||||||||||||||||| |||| |||||||||||||   ||| |||||  |||||||||| |||||||| |||| || |  ||||||||||| || |    
T  9962135 caaccgatccaacccaaaccacattggtttggtttggtttgaattttatttgaaaagtcaaccaaatcaaacaaaaccgcctgtttttttatcttgcgat 9962234  T
Q  121 ttagatgactttta 134  Q
    |  |||||||||||    
T  9962235 tcggatgactttta 9962248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 154
Target Start/End: Complemental strand, 18310094 - 18309961
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggt 120  Q
    |||||||||||| ||||||||||||||||||||||||||    || |||||| ||| |||||| || |||||||||   |||  ||||||||| | ||||    
T  18310094 caaccgatccaaaccaaaccgcatttgtttggtttggtttgagttttattttaaaattcaaccaaaccaaaccaaatcacatgtttttttatcatgcggt 18309995  T
Q  121 ttagatgacttttaccctcataaccgaaccaacc 154  Q
    |  ||||||||||| ||| | ||| |||||||||    
T  18309994 tcggatgacttttatcctaaaaactgaaccaacc 18309961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 52380718 - 52380847
Alignment:
Q  30 ccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatga 128  Q
    |||| |||||||||||| |||| |||||||||| ||  |||||| |||||||||||||  ||||||||| ||||| || | |||||| | ||| | ||||    
T  52380718 ccaatccaaaccgcattagtttagtttggttcaaatcttattttaaaagtcaaccgaactaaaccaaaccgcatagttatatatcttgcagttcatatga 52380817  T
Q  129 cttttaccctcataaccgaaccaacccaca 158  Q
    |||||| |||||  |||| ||||| |||||    
T  52380818 cttttagcctcaataccgtaccaaaccaca 52380847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 161
Target Start/End: Original strand, 27507507 - 27507619
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    |||||||| ||  |||| |||||| |||||||||||||  |||||||| |||||| || |||||||| |||||  |||||||||||  |||| |||||||    
T  27507507 ttggtttgatttggattttattttaaaagtcaaccgaactaaaccaaattgcatacttatttatcttgcggttcggatgacttttattctcaaaaccgaa 27507606  T
Q  149 ccaacccacaccg 161  Q
    |||| || |||||    
T  27507607 ccaaaccgcaccg 27507619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 40095401 - 40095549
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattc-----tatttttaaagtcaaccgaatcaaaccaaactgcatattt-tttat 112  Q
    ||||||||||||||| ||||||| |||| |||||||||||||  | ||      |||||| ||| | ||||||| ||| |||||| |||||||| |||||    
T  40095401 caccaaccgatccaatccaaaccacattggtttggtttggtttggtttgagttttattttaaaaataaaccgaaacaagccaaaccgcatatttatttat 40095500  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||| |||||  ||| ||||||| ||||| ||||||||||| || |||||    
T  40095501 cttgcggttcggataacttttaacctcaaaaccgaaccaaaccgcaccg 40095549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 50153476 - 50153376
Alignment:
Q  49 tttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccga 147  Q
    ||||||||||||| |||| |||||| |||||||||||||  ||| |||||  |||| ||||||||||| | ||| |||| ||||||| ||||| ||||||    
T  50153476 tttggtttggttcggattttattttaaaagtcaaccgaacaaaatcaaaccacatatttttttatcttgcagttcagataacttttaacctcaaaaccga 50153377  T
Q  148 a 148  Q
    |    
T  50153376 a 50153376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 34914200 - 34914097
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    ||||||||||||  ||| |||||| |||||||||| || |||||||||||||||| |||||||| |  | |||| ||||||||||  ||||| || ||||    
T  34914200 ttggtttggttcgaattttattttaaaagtcaaccaaagcaaaccaaactgcatacttttttatttcgcagtttggatgacttttcacctcaaaatcgaa 34914101  T
Q  149 ccaa 152  Q
    ||||    
T  34914100 ccaa 34914097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 35992586 - 35992627
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggtt 60  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  35992586 caccaaccgatccaaaccaaaccgcattagtttggtttggtt 35992627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 17651851 - 17651719
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggttca-----gattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatctt 115  Q
    ||||| |||||| |||||||||||| |||||||||||||||     |||| |||||| |||||||||||||  ||| ||||| ||||  ||||||| |||    
T  17651851 caaccaatccaaaccaaaccgcattggtttggtttggttcagttcggattttattttaaaagtcaaccgaacaaaatcaaaccgcatgcttttttacctt 17651752  T
Q  116 acggtttagatgacttttaccctcataaccgaa 148  Q
    ||  ||   |||||||||| ||||| |||||||    
T  17651751 acaattcgaatgacttttagcctcaaaaccgaa 17651719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 44055819 - 44055783
Alignment:
Q  26 cgatccaacccaaaccgcatttgtttggtttggttca 62  Q
    |||||||||||||||| ||||||||||||||||||||    
T  44055819 cgatccaacccaaaccacatttgtttggtttggttca 44055783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 2490044 - 2490147
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    ||||||||||||  ||| |||||| ||||||||| ||| |||||||||  ||||| || |||||||| |||||  ||| ||||||| ||||| || ||||    
T  2490044 ttggtttggttcgaattttattttaaaagtcaactgaaccaaaccaaatcgcatacttatttatcttgcggttcggataacttttagcctcaaaatcgaa 2490143  T
Q  149 ccaa 152  Q
    ||||    
T  2490144 ccaa 2490147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 152
Target Start/End: Complemental strand, 16062944 - 16062826
Alignment:
Q  35 ccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgactttt 133  Q
    |||||||  ||| |||||||||| |||  ||| |||||| ||||||||| ||||||||||||||   ||| || || ||||||||||| | |||| ||||    
T  16062944 ccaaaccatattagtttggtttgattcgaattttattttaaaagtcaactgaatcaaaccaaaccagatacttattaatcttacggttcaaatgaatttt 16062845  T
Q  134 accctcataaccgaaccaa 152  Q
    |  |||| |||||||||||    
T  16062844 attctcaaaaccgaaccaa 16062826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 47984498 - 47984619
Alignment:
Q  31 caacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgac 129  Q
    ||||||||||| |||| ||| ||||||||||| ||| |||||| |||||||  | || |||| ||||||||||  ||||||||||| |  |||  |||||    
T  47984498 caacccaaaccacattggtt-ggtttggttcatattttattttaaaagtcagtcaaaccaaatcaaactgcatgtttttttatcttgcaatttgaatgac 47984596  T
Q  130 ttttaccctcataaccgaaccaa 152  Q
    |||||  |||| |||||||||||    
T  47984597 ttttagtctcaaaaccgaaccaa 47984619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 8268738 - 8268701
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggttt 56  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  8268738 caccaaccgatccaacccaaaccgtattagtttggttt 8268701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 10847543 - 10847588
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaacca 95  Q
    |||||||||||| |||| |||||| ||||||||||||| |||||||    
T  10847543 ttggtttggttctgattttattttcaaagtcaaccgaaccaaacca 10847588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 16529536 - 16529628
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||| ||| ||||||||| |||||||||| ||||  ||||||||||  | |||| |||||||||||  |||| ||||||||||| || |||||    
T  16529536 ttttaaaaatcaaccgaaccaaaccaaacggcatgcttttttatctcgcagtttggatgacttttatgctcaaaaccgaaccaaaccgcaccg 16529628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 40436534 - 40436390
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgca--tattttttatctta 116  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||| |||||||||| |||  | |||||||||||     
T  40436534 caccaaccgatccaacccaaaccgcattggtttggttcggttcaaattttatttttaaagtcaaccgaaccaaaccaaacggcatgttttttttatcttg 40436435  T
Q  117 cggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |  ||| ||| ||||||||||||| ||||||||||| || |||||    
T  40436434 caatttggatcacttttaccctcaaaaccgaaccaaaccgcaccg 40436390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 9012822 - 9012960
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatat-tttttatcttac 117  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||||     ||||||||||| ||| |  |||||||||| |    
T  9012822 caccaaccgatccaacccaaaccgcattggtttggtttggttcggattgtattttaaaagtcaa-----tcaaaccaaaccgcacacatttttatcttgc 9012916  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||||  | ||||||||| ||||| || |||||||||||||||||    
T  9012917 ggttcgggtgacttttagcctcaaaatcgaaccaacccacaccg 9012960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 24682105 - 24682209
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    |||||||||||||| |||| |||||| |||||||| ||||||||||||||||||||| || |||||||| |||||  ||||| ||||| ||||| |||||    
T  24682105 gtttggtttggttc-gattttattttaaaagtcaatcgaatcaaaccaaactgcatacttatttatcttgcggttcggatgaattttagcctcaaaaccg 24682203  T
Q  147 aaccaa 152  Q
    ||||||    
T  24682204 aaccaa 24682209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 44336841 - 44336726
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgca--tattttttatcttacggtttagatgacttttaccctcataacc 145  Q
    |||||||||||||| |||| |||||| ||||||||||||| |||||||||| |||  | ||||||||||| |||||  |||||||||||  |||| ||||    
T  44336841 gtttggtttggttcggattgtattttaaaagtcaaccgaaccaaaccaaaccgcatgttttttttatcttgcggttcggatgacttttaaactcaaaacc 44336742  T
Q  146 gaaccaacccacaccg 161  Q
    ||||||| || |||||    
T  44336741 gaaccaaaccgcaccg 44336726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 7428452 - 7428559
Alignment:
Q  53 gtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatat-tttttatcttacggtttagatgacttttaccctcataaccgaacca 151  Q
    |||||||||  ||| |||||| ||||||||||||| |||||||||| ||||   |||||||| | ||||| |||||||||||| ||||||||||||||||    
T  7428452 gtttggttcgaattttattttaaaagtcaaccgaaccaaaccaaaccgcatgcatttttatcatgcggttcagatgacttttaacctcataaccgaacca 7428551  T
Q  152 acccacac 159  Q
    | ||||||    
T  7428552 aaccacac 7428559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 19539476 - 19539338
Alignment:
Q  18 acaccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatat-tttttatctta 116  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| |||| |||||| |||||||||     || ||||||| |||| | ||||||||||     
T  19539476 acaccaaccgatccaacccaatccgcattggtttggtttggttcggattttattttaaaagtcaac-----cataccaaaccgcatgtatttttatcttg 19539382  T
Q  117 cggtttagatgacttttaccctcataaccgaaccaacccacacc 160  Q
      |||  ||| ||||||| || || |||||||||||||||||||    
T  19539381 aagttcggataacttttagccccaaaaccgaaccaacccacacc 19539338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 14549270 - 14549178
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcatatttttt-atcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||| ||| |||||||||||||||||||| ||||||||||| |||| ||||||| |||||||||||  |||| ||||||| ||| ||||||||    
T  14549270 ttttaaaaatcaaccgaatcaaaccaaaccgcatatttttttatctcacggtttggatgacttttatgctcaaaaccgaatcaaaccacaccg 14549178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 33566059 - 33565918
Alignment:
Q  19 caccaaccgatccaacccaaaccgca-----tttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata---tttttt 110  Q
    ||||||||||||||| | ||||||||     || ||||||||||||||  ||| ||||||  |||||||||||| |||||||||| |||||   ||||||    
T  33566059 caccaaccgatccaatcaaaaccgcactggtttggtttggtttggttcgaattttattttagaagtcaaccgaaccaaaccaaaccgcatactttttttt 33565960  T
Q  111 atcttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    ||||| ||||| | |||||||||| ||||| |||| ||||||    
T  33565959 atcttgcggttcaaatgacttttagcctcaaaaccaaaccaa 33565918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 36340774 - 36340877
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    |||||||||||||| |||| |||||| ||||||||||||| |||| ||||| ||||| ||||| | ||||||||| ||||||  |||| ||||| || ||    
T  36340774 gtttggtttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatactttttcagcttacggttcagatgaaatttagcctcaaaatcg 36340873  T
Q  147 aacc 150  Q
    ||||    
T  36340874 aacc 36340877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 4785304 - 4785199
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||| ||||| ||||| ||||||||  | |||||   ||||||||||  |||| |||||    
T  4785304 gtttggtttggttcatattatattttaaaagtcaaccgaaccaaatcaaaccgcatacttttttattctgcggttcgtatgacttttaatctcaaaaccg 4785205  T
Q  147 aaccaa 152  Q
    ||||||    
T  4785204 aaccaa 4785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 15272286 - 15272327
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggtt 60  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  15272286 caccaaccgatccaacccaaactgcatttgtttggtttggtt 15272327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 15452655 - 15452696
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggtt 60  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  15452655 caccaaccgatccaacccaaactgcatttgtttggtttggtt 15452696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 161
Target Start/End: Original strand, 22811194 - 22811301
Alignment:
Q  55 ttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaaccaac 153  Q
    |||||||| ||| |||||| ||||||||||||| |||||||||| |||||  | |||||||| | ||| |||||||||||| ||||| || | ||||||     
T  22811194 ttggttcaaattttattttaaaagtcaaccgaaccaaaccaaacagcatacatatttatcttgcagttcagatgacttttagcctcaaaatcaaaccaaa 22811293  T
Q  154 ccacaccg 161  Q
    || |||||    
T  22811294 ccgcaccg 22811301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 8036079 - 8036022
Alignment:
Q  80 caaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttacc 136  Q
    |||||||| |||||||||||||||  ||||||||||| ||||| ||||||||||||||    
T  8036079 caaccgaaccaaaccaaactgcatgcttttttatcttgcggttcagatgacttttacc 8036022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 10661200 - 10661108
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||| ||| ||||||||| |||||||||| ||||  ||||||||||  |||||| |||||||||||  |||| ||||||||||| || |||||    
T  10661200 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaaccgcaccg 10661108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 31497583 - 31497663
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgttt-----ggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaac 98  Q
    |||| ||||||||||||||||||| ||||     |||||||||  |||  |||||||||||||||||||| ||||||||||    
T  31497583 aaccaatccaacccaaaccgcattagtttggtttggtttggtttggatgttatttttaaagtcaaccgaaccaaaccaaac 31497663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 45366399 - 45366271
Alignment:
Q  25 ccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggttta 123  Q
    |||| |||| |||||| ||||| |||||||||| ||| | ||  ||||| |||| |||||||| |||| ||||| | ||  ||||||||||| ||||| |    
T  45366399 ccgaaccaatccaaactgcattggtttggtttgattcggttttcattttaaaaggcaaccgaaccaaatcaaaccgtatgcttttttatcttgcggttca 45366300  T
Q  124 gatgacttttaccctcataaccgaaccaa 152  Q
     |||||||||| ||||| ||||| |||||    
T  45366299 tatgacttttaacctcaaaaccggaccaa 45366271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 33068312 - 33068229
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||| ||| ||||| ||| |||||||||| ||||  ||||||||||| |||||| |||||||||||  |||| |||||||||||    
T  33068312 ttttaaaaatcaactgaaccaaaccaaaccgcatgcttttttatcttgcggtttggatgacttttatgctcaaaaccgaaccaa 33068229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 13325398 - 13325328
Alignment:
Q  17 tacaccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaa 87  Q
    ||||| ||||||||||| |||||| | |||  ||| |||||||||||||| |||||| ||| |||||||||    
T  13325398 tacactaaccgatccaatccaaactgtattgattttgtttggttcagattatattttaaaattcaaccgaa 13325328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 11219018 - 11218913
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattt-tttatcttacggtttagatgacttttaccctcataaccg 146  Q
    ||||| |||| |||||| | |||||| |||||||||| || |||||||||  ||||| || |||||||| || ||  ||||||||||| ||||| || ||    
T  11219018 gtttgatttgattcagactttattttaaaagtcaaccaaaccaaaccaaatcgcatacttatttatcttgcgtttcggatgacttttagcctcaaaatcg 11218919  T
Q  147 aaccaa 152  Q
    ||||||    
T  11218918 aaccaa 11218913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 30254137 - 30254186
Alignment:
Q  45 tttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaacc 94  Q
    |||||||||||||||||| | | | |||||||||||||||||| ||||||    
T  30254137 tttgtttggtttggttcaaaatatttttttaaagtcaaccgaaccaaacc 30254186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 37162656 - 37162704
Alignment:
Q  46 ttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaacc 94  Q
    |||||||||||||||| |||| || ||| ||| ||||||||||||||||    
T  37162656 ttgtttggtttggttcggattttaatttaaaaatcaaccgaatcaaacc 37162704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 5122376 - 5122512
Alignment:
Q  26 cgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttag 124  Q
    |||||||||||| ||| |||| |||||||||||||| |||| |||||||||||||||||||| |||| ||||| ||||  |||||||||||  ||||||     
T  5122376 cgatccaacccagaccacattggtttggtttggttcggattttatttttaaagtcaaccgaaccaaatcaaaccgcatgcttttttatcttgtggtttat 5122475  T
Q  125 atgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||||||||||||||| ||||||||||| || |||||    
T  5122476 atgacttttaccctcaaaaccgaaccaaaccgcaccg 5122512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 48338432 - 48338305
Alignment:
Q  25 ccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatcttacggtttag 124  Q
    |||||||||  |||||||||||  ||||||||||||  |||| |||||| ||||||||||||| ||||||||||||||| |||||||||||||||||  |    
T  48338432 ccgatccaattcaaaccgcattgatttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaaactgcatgttttttatcttacggttcgg 48338333  T
Q  125 atgacttttaccctcataaccgaaccaa 152  Q
    |||||||||| ||| | |||||||||||    
T  48338332 atgacttttaaccttaaaaccgaaccaa 48338305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 36106404 - 36106548
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaacc-aaactgcat-attttttatctta 116  Q
    ||||||| |||||||| ||||||||||| |||||||||||||| |||| |||||| ||||||||||||| |||||| |||| ||||  |||||||||||     
T  36106404 caccaactgatccaactcaaaccgcattggtttggtttggttcggattttattttaaaagtcaaccgaaccaaaccaaaaccgcatgtttttttatcttg 36106503  T
Q  117 cggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||||  ||||||||||| ||||| ||||||||||| || |||||    
T  36106504 cggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccg 36106548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 45983473 - 45983347
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggt 120  Q
    ||||||||||||||||||||||||| |||||||||||     ||  ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  45983473 caaccgatccaacccaaaccgcattagtttggtttgg-----atgttatttttaaagtcaaccgaatcaaaccaaaccgcatgattttttatcttgcggt 45983379  T
Q  121 ttagatgacttttaccctcataaccgaaccaa 152  Q
    | |||| ||||||| | ||| | |||||||||    
T  45983378 tcagataacttttatcttcaaagccgaaccaa 45983347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 48293395 - 48293524
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttac 117  Q
    ||||||||||||||||||||||||||     |||||||||||| |||| |||||| |||| |||||||| |||||||||| ||||  ||||||| ||| |    
T  48293395 caccaaccgatccaacccaaaccgca-----ttggtttggttcggattttattttaaaagacaaccgaaccaaaccaaaccgcatgcttttttaccttgc 48293489  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaa 152  Q
    ||||  ||||||||||| ||||| |||||||||||    
T  48293490 ggttcggatgacttttaacctcaaaaccgaaccaa 48293524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 15723981 - 15723861
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggttcagattc-----tatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatctt 115  Q
    ||||||||||||||||||||||||| |||||||||||||  | ||      |||||||||||||||||||| ||||| |||||||||| |||||||| ||    
T  15723981 caaccgatccaacccaaaccgcattagtttggtttggtttggtttggatgttatttttaaagtcaaccgaaccaaactaaactgcatacttttttatatt 15723882  T
Q  116 acggtttagatgacttttacc 136  Q
    |||||| |||||| |||||||    
T  15723881 acggttcagatgatttttacc 15723861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 18396426 - 18396310
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatat-tttttatcttac 117  Q
    ||||||||||||||||||||||| |||| ||||||||| |||| |||| ||| || ||||||||| ||| |||||||||| |||||| |||||||||| |    
T  18396426 caccaaccgatccaacccaaaccacattggtttggttttgttcggattttatcttaaaagtcaactgaaccaaaccaaaccgcatatctttttatcttgc 18396327  T
Q  118 ggtttagatgactttta 134  Q
    |||| | || |||||||    
T  18396326 ggttcaaataactttta 18396310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 20986490 - 20986389
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    ||||||||||||||| ||| ||||||  |||||||||||| |||||||||| ||||| || |||||||| |||||| ||||||||||| | ||| |||||    
T  20986490 gtttggtttggttcatattttattttataagtcaaccgaaccaaaccaaaccgcatacttgtttatcttgcggtttggatgacttttagcttcaaaaccg 20986391  T
Q  147 aa 148  Q
    ||    
T  20986390 aa 20986389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 40806807 - 40806946
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtt 121  Q
    |||||| |||| |||||| ||||| |||||||||||||  |||  | |||| ||| ||||||||| |||||||||  ||||  ||||||||||  |||||    
T  40806807 aaccgaaccaatccaaactgcattggtttggtttggtttggatgattttttaaaaatcaaccgaaccaaaccaaatcgcatgcttttttatctcgcggtt 40806906  T
Q  122 tagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    | |||||||||||  |||| ||||||||||| ||||||||    
T  40806907 tggatgacttttatgctcaaaaccgaaccaaaccacaccg 40806946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 32223302 - 32223447
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggtt-----cagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatctt 115  Q
    ||||||||| |||||||||||||||||||||||||||||     |||||| | |||| ||||| ||| |||  || |||||| ||||  |||||||||||    
T  32223302 caaccgatctaacccaaaccgcatttgtttggtttggtttggttcagattgtgttttaaaagtaaacggaacaaatccaaaccgcatgcttttttatctt 32223401  T
Q  116 acggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
     || ||| ||||||||||| ||||| ||||||| ||| || |||||    
T  32223402 tcgatttggatgacttttaacctcaaaaccgaatcaaaccgcaccg 32223447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 42198873 - 42198753
Alignment:
Q  27 gatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatcttacggtttagat 126  Q
    |||||||| |||||| |||| ||||||||||||||||||| |||||| |||||||||      |||| |||| |||| ||||||||||| |||||  |||    
T  42198873 gatccaactcaaaccacattagtttggtttggttcagattttattttaaaagtcaac-----aaaacaaaaccgcatgttttttatcttgcggttatgat 42198779  T
Q  127 gacttttaccctcataaccgaaccaa 152  Q
    ||| |||| ||||| || ||||||||    
T  42198778 gacatttaacctcaaaatcgaaccaa 42198753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 18319551 - 18319615
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaac 83  Q
    |||||||||||||||||||||||||||| |||||||||||| |  ||| |||||| |||||||||    
T  18319551 caccaaccgatccaacccaaaccgcattggtttggtttggtacgaattttattttaaaagtcaac 18319615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 18399130 - 18399066
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaac 83  Q
    |||||||||||||||||||||||||||| |||||||||||| |  ||| |||||| |||||||||    
T  18399130 caccaaccgatccaacccaaaccgcattggtttggtttggtacgaattttattttaaaagtcaac 18399066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 28147870 - 28147750
Alignment:
Q  26 cgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttag 124  Q
    ||||| || |||||||||||| ||||||||||| ||||||| |||||| |||||||||  ||  ||||||||| || || || |||||||||||||| ||    
T  28147870 cgatcaaatccaaaccgcattggtttggtttggatcagattatattttaaaagtcaacaaaactaaaccaaaccgcctacttatttatcttacggttcag 28147771  T
Q  125 atgacttttaccctcataacc 145  Q
    ||||  |||| ||||| ||||    
T  28147770 atgatgtttaacctcaaaacc 28147750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 8691491 - 8691550
Alignment:
Q  75 aaagtcaaccgaatcaaaccaaactgcatattttttatcttacggtttagatgactttta 134  Q
    |||||||||  ||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  8691491 aaagtcaactaaatcaaaccaaactgcatattttttattttacgatttagataactttta 8691550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 23625881 - 23626020
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttgg-----ttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttat 112  Q
    ||||||||||||||| ||||||||||||  ||||||||||     |||||||| |||||| |||||||| |||| ||||| |||| ||||| ||||||||    
T  23625881 caccaaccgatccaatccaaaccgcattgatttggtttgggttgattcagattttattttaaaagtcaagcgaaccaaacaaaaccgcatacttttttat 23625980  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
     ||  | ||| ||||||||||| ||| | |||||| ||||    
T  23625981 tttgtgatttggatgacttttaaccttaaaaccgagccaa 23626020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 40494520 - 40494385
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatcttacg 118  Q
    |||||||||||||||| |||||| ||||  ||||||||| |  | | | |||||| |||||| || ||| ||||||||||  | |||||||||||||||     
T  40494520 caccaaccgatccaacacaaaccacattaatttggtttgatataaactttattttaaaagtctactgaaccaaaccaaaccacttattttttatcttaca 40494421  T
Q  119 gtttagatgacttttaccctcataaccgaaccaacc 154  Q
    ||| | || ||||||| ||||| |||||||| ||||    
T  40494420 gttcatataacttttaacctcaaaaccgaacaaacc 40494385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 48602509 - 48602583
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaac 98  Q
    ||||||||||||||||||||||||||||     |||||||||  |||| |||||| ||||||||||||| ||||||||||    
T  48602509 caccaaccgatccaacccaaaccgcatt-----ggtttggttaggattgtattttcaaagtcaaccgaaccaaaccaaac 48602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 23449981 - 23450100
Alignment:
Q  26 cgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttag 124  Q
    |||||||| |||||||||||| ||||||| ||     |||| |||||| ||||| ||||||| |||||||||| ||||| || |||||||| | |||  |    
T  23449981 cgatccaatccaaaccgcattggtttggtgtg-----gattatattttaaaagttaaccgaaccaaaccaaaccgcatacttatttatcttgcagttcgg 23450075  T
Q  125 atgacttttaccctcataaccgaac 149  Q
    |||||||||| ||||| ||||||||    
T  23450076 atgacttttaacctcaaaaccgaac 23450100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 8311982 - 8311883
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttac 117  Q
    ||||||||||||||||| ||||  |||  ||||||||||  ||||||  |||||| ||||| | ||||| ||||||||||||||||  ||||||||||||    
T  8311982 caccaaccgatccaacctaaactacatcggtttggtttgaatcagatattattttaaaagtaatccgaaccaaaccaaactgcatacatttttatcttac 8311883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 19753535 - 19753638
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    ||||||||||||||  ||| |||||| ||||||||||||| |||| ||||| ||||| ||||| | ||||||||| ||||||  |||| ||||| || ||    
T  19753535 gtttggtttggttcgaattttattttaaaagtcaaccgaaccaaatcaaaccgcatactttttcagcttacggttcagatgaaatttagcctcaaaatcg 19753634  T
Q  147 aacc 150  Q
    ||||    
T  19753635 aacc 19753638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 19786271 - 19786168
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    ||||||||||||||  ||| |||||| ||||||||||||| |||| ||||| ||||| ||||| | ||||||||| ||||||  |||| ||||| || ||    
T  19786271 gtttggtttggttcgaattttattttaaaagtcaaccgaaccaaatcaaaccgcatactttttcagcttacggttcagatgaaatttagcctcaaaatcg 19786172  T
Q  147 aacc 150  Q
    ||||    
T  19786171 aacc 19786168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 10218716 - 10218642
Alignment:
Q  79 tcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    ||||| |||||||||||||| ||||  |||||||||||  |||||||||||||||||  |||| |||||||||||    
T  10218716 tcaactgaatcaaaccaaaccgcatgcttttttatcttgaggtttagatgacttttatgctcaaaaccgaaccaa 10218642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 23120271 - 23120385
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    |||||||||||||  |||  | ||||||||||||| |||| |||||||||| ||||  ||||||||||| |||||  ||||||||||||| ||| || ||    
T  23120271 gtttggtttggtttggatgttttttttaaagtcaatcgaaccaaaccaaaccgcatgcttttttatcttgcggttcggatgacttttaccttcaaaatcg 23120370  T
Q  147 aaccaacccacaccg 161  Q
    || ||| || |||||    
T  23120371 aatcaaaccgcaccg 23120385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 4688770 - 4688685
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttt 108  Q
    |||||| |||| | ||||| |||| ||||||||||||| ||||    |||| ||||||||||||||| ||||||||||||| ||||    
T  4688770 aaccgaaccaatcaaaaccacattggtttggtttggttaagataactttttaaaagtcaaccgaatcgaaccaaactgcatttttt 4688685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 18536624 - 18536760
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttg-----gtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttat 112  Q
    ||||||| |||||||| ||||| |||||||||||     ||||||||| |||| | |||| ||||||||||||| ||| ||||||||  |  ||||||||    
T  18536624 caccaactgatccaactcaaactgcatttgtttggttttgtttggttcggattgtgttttaaaagtcaaccgaaccaacccaaactgtgtgcttttttat 18536723  T
Q  113 cttacggtttagatgacttttaccctcataaccgaac 149  Q
    |||  ||||| ||||| ||||| | ||| ||||||||    
T  18536724 cttgtggtttggatgaattttagcttcaaaaccgaac 18536760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 40900079 - 40900211
Alignment:
Q  30 ccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatga 128  Q
    |||| |||||||||||| |||||||||||||  |||    |||| ||| ||||| ||| |||||||||| ||||  ||||||||||  | |||| |||||    
T  40900079 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgcatgcttttttatctcgcagtttggatga 40900178  T
Q  129 cttttaccctcataaccgaaccaacccacaccg 161  Q
    ||||||  |||| ||||||||||| || |||||    
T  40900179 cttttatgctcaaaaccgaaccaaaccgcaccg 40900211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 43630624 - 43630532
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcatatttttt-atcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||| ||| |||||| || |||||||||| ||||||||||| |||| ||||||| |||||||||||  |||| || |||||||| || |||||    
T  43630624 ttttaaaaatcaaccaaaccaaaccaaaccgcatatttttttatctcacggtttggatgacttttatactcaaaatcgaaccaaaccgcaccg 43630532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 1566109 - 1566196
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattt-tttatcttacggtttagatgactttta 134  Q
    ||||| |||| ||| |||| || ||| ||| | ||||||||||||| |||| ||||| || |||||||||||||| ||||||||||||    
T  1566109 gtttgatttgattcggattttaatttaaaaattaaccgaatcaaactaaaccgcatacttatttatcttacggttcagatgactttta 1566196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 8484763 - 8484660
Alignment:
Q  24 accgatccaacccaaaccgcatttgtttggttt-----ggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttac 117  Q
    |||||||||| |||||||||||| |||||||||     ||||||  || |||||| |||||||||||||||||  ||||| ||||| || |||||||| |    
T  8484763 accgatccaatccaaaccgcattggtttggtttagtttggttcatgttttattttaaaagtcaaccgaatcaacacaaaccgcatagttatttatcttgc 8484664  T
Q  118 ggtt 121  Q
    ||||    
T  8484663 ggtt 8484660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 4642471 - 4642385
Alignment:
Q  67 ctatttttaaagtcaaccgaatcaaaccaaactgcatattt-tttatcttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    ||||||| |||||||| |||| |||| |||||| |||| || |||||||| |||||  ||| ||||||| ||||| |||||||||||    
T  4642471 ctattttaaaagtcaatcgaaccaaatcaaactacatacttatttatcttgcggttcggataacttttagcctcaaaaccgaaccaa 4642385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 46471488 - 46471426
Alignment:
Q  68 tatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgac 129  Q
    |||||| ||||||||||||||||||| |||| | ||| |||||||||||| |||| |||||||    
T  46471488 tattttaaaagtcaaccgaatcaaactaaaccgtatatttttttatcttatggttcagatgac 46471426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 49640914 - 49640841
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatat--tttttatcttacggtt 121  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||| ||||| ||||||  ||||| ||||||||||    
T  49640914 ttggtttggttcgaattttattttaaaagtcaaccaaatcaaatcaaaccgcatattatttttgtcttacggtt 49640841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 21069148 - 21069055
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgt-----ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattt 107  Q
    |||||||| |||||| |||||||||||| ||     ||||||||||||  |||  ||||| |||||||||| || | |||||||||||||||||    
T  21069148 caccaaccaatccaatccaaaccgcattggtttgagttggtttggttcgaatttaattttaaaagtcaaccaaaccgaaccaaactgcatattt 21069055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 25954 - 25827
Alignment:
Q  25 ccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatcttacggtttag 124  Q
    |||||||||  |||||||||||  ||||||||||||  |||| |||||| ||||||||||||| ||||||||||||||| |||||||||||||||||  |    
T  25954 ccgatccaattcaaaccgcattgatttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaaactgcatgttttttatcttacggttcgg 25855  T
Q  125 atgacttttaccctcataaccgaaccaa 152  Q
    |||||||||| ||| | |||||||||||    
T  25854 atgacttttaaccttaaaaccgaaccaa 25827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 14619 - 14477
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttac 117  Q
    ||||||| ||||||| | ||||||||||||||||||||||||| |||| |  ||| | ||||||| ||| |||||||||  ||||  ||||||||||| |    
T  14619 caccaactgatccaaac-aaaccgcatttgtttggtttggttcggattgtgctttaagagtcaactgaaccaaaccaaatcgcatgcttttttatcttgc 14521  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||||  ||||||||||| | ||| ||| ||||||| || |||||    
T  14520 ggttcggatgacttttaacttcaaaactgaaccaaaccgcaccg 14477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 44085582 - 44085452
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat--attttttatctta 116  Q
    ||||||||||||||||||||||||||||     |||||| |||||||| |||||||||||||||||||| |||||||||| ||||   |||||||||||     
T  44085582 caccaaccgatccaacccaaaccgcatt-----ggtttgattcagattttatttttaaagtcaaccgaaccaaaccaaaccgcatgctttttttatcttg 44085488  T
Q  117 cggtttagatgacttttaccctcataaccgaaccaa 152  Q
    ||||| |||||||||| ||||||| ||| |||||||    
T  44085487 cggttcagatgactttaaccctcaaaactgaaccaa 44085452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 12041580 - 12041717
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttt-ttatcttac 117  Q
    |||||||||||||||||||| |||||||     |||||||||| |||| |||||| ||||||||||||| |||| ||||| |||| |||| |||||||||    
T  12041580 caccaaccgatccaacccaa-ccgcatt-----ggtttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatgtttttttatcttac 12041673  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||| |||||||||||| ||||| ||||||||||| ||||||||    
T  12041674 ggttcagatgacttttagcctcaaaaccgaaccaaaccacaccg 12041717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 13193995 - 13193864
Alignment:
Q  20 accaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacg 118  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| |||| |||||| ||||||||||||| |||||||||| | ||  ||||||||||||||    
T  13193995 accaaccgatccaacccaaactgcattggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaaacagtatgcttttttatcttacg 13193896  T
Q  119 gtttagatgacttttaccctcataaccgaacc 150  Q
    ||| | |||| ||||| ||| | |||||||||    
T  13193895 gttcaaatgatttttagccttaaaaccgaacc 13193864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 27301469 - 27301603
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttac 117  Q
    |||||| |||||  |||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||  ||||||||||| |    
T  27301469 caccaaacgatctgacccaaaccgcattggtttggtttggttcaaattttattttaaaagtcaaccgaatcaaaccaaaccgcatgcttttttatcttgc 27301568  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||   |||| ||||||  |||| |||||||||||    
T  27301569 ggtccggatggcttttaatctcaaaaccgaaccaa 27301603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 28790603 - 28790469
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttac 117  Q
    ||||||||||||| ||||||||| |||| |||||||||||||  |||| |||||| ||||||||||||||| || ||||| ||||  ||||||||||| |    
T  28790603 caccaaccgatccgacccaaaccacattggtttggtttggtttggattttattttaaaagtcaaccgaatctaatcaaaccgcatgcttttttatcttgc 28790504  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||| |||||||||||| | ||| ||| |||||||    
T  28790503 ggttcagatgacttttaacatcaaaactgaaccaa 28790469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 41461179 - 41461045
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttac 117  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||  ||| |||||| ||||||||||||| |||||||||| ||||| ||||||| ||| |    
T  41461179 caccaaccgattcaatccaaaccgcattggtttggtttggttcgaattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttttttagcttgc 41461080  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaa 152  Q
    ||||  | |||||||||  || | |||||||||||    
T  41461079 ggttcggttgacttttagtctaaaaaccgaaccaa 41461045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 5862646 - 5862738
Alignment:
Q  49 tttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctca 140  Q
    ||||||||||||| |||| |||||| ||||||||||||| |||||||||| ||||| |||||||| || || |||||||||||||||||||||    
T  5862646 tttggtttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttttttattttgcgatttagatgacttttaccctca 5862738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 17762839 - 17762696
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttac 117  Q
    |||||||| |||||| ||||||| |||  ||||| |||||||| |||| |||||| ||||||||||||| |||||||||| ||||  ||||||||||  |    
T  17762839 caccaaccaatccaatccaaaccacatcggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatgtttttttatctcgc 17762740  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||||  | ||||||||| ||||| |||| ||| || ||||||||    
T  17762739 ggttcggttgacttttagcctcaaaaccaaacaaaaccacaccg 17762696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 30759628 - 30759717
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgttt-----ggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat 103  Q
    |||||||||||| ||| ||||||||||| ||||     ||||||||||| ||| |||||| |||| ||||||||||||||||||||||||    
T  30759628 caccaaccgatctaacacaaaccgcattggtttggtttggtttggttcaaattttattttaaaagccaaccgaatcaaaccaaactgcat 30759717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 30761744 - 30761872
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggt 120  Q
    ||||||||| |||||||| |||||| |||||||||||||   ||| |||||| |||||||||  ||||||| ||||| ||||  |||||||||||  | |    
T  30761744 caaccgatctaacccaaatcgcattggtttggtttggtttgaattttattttaaaagtcaacataatcaaaacaaaccgcatgtttttttatcttgtgat 30761843  T
Q  121 ttagatgacttttaccctcataaccgaac 149  Q
    | |||||||||||| ||||| || |||||    
T  30761844 tcagatgacttttaacctcaaaatcgaac 30761872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 36500622 - 36500685
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaa 82  Q
    |||||||||||||||||||||||||| | |||||||| |||||| ||| |||||| ||||||||    
T  36500622 caccaaccgatccaacccaaaccgcaatggtttggttcggttcatattgtattttaaaagtcaa 36500685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 1331102 - 1331023
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat 103  Q
    ||||||| ||||||||||||||| |||| |||||||||||     ||| |||||| ||||||||||||| |||||||| ||||||    
T  1331102 caccaactgatccaacccaaaccacattggtttggtttgg-----attttattttaaaagtcaaccgaaccaaaccaatctgcat 1331023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 10242732 - 10242807
Alignment:
Q  18 acaccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaac 93  Q
    |||||||| ||||||||| |||||| |||  |||||||| ||||||||| |||||| ||| | |||||||||||||    
T  10242732 acaccaactgatccaacctaaaccgtattactttggtttagttcagattttattttaaaattgaaccgaatcaaac 10242807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 4657817 - 4657699
Alignment:
Q  31 caacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgac 129  Q
    |||| ||||||||||| ||||||||||| |  | || |||||| ||| |||||||||| |||||||||| |||  ||||||||||| ||| | ||||| |    
T  4657817 caactcaaaccgcattggtttggtttgggttggtttttattttaaaaatcaaccgaattaaaccaaactacatgtttttttatcttgcggctcagatgtc 4657718  T
Q  130 ttttaccctcataaccgaa 148  Q
    ||||| ||| | |||||||    
T  4657717 ttttaaccttaaaaccgaa 4657699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 11678093 - 11678015
Alignment:
Q  18 acaccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaac 98  Q
    ||||||||||||||||  ||||||||| | |||  ||||||||| |||| |||||| ||||||||||||| |||| |||||    
T  11678093 acaccaaccgatccaattcaaaccgcaatagtt--gtttggttcggattttattttaaaagtcaaccgaaccaaatcaaac 11678015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 11695571 - 11695493
Alignment:
Q  18 acaccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaac 98  Q
    ||||||||||||||||  ||||||||| | |||  ||||||||| |||| |||||| ||||||||||||| |||| |||||    
T  11695571 acaccaaccgatccaattcaaaccgcaatagtt--gtttggttcggattttattttaaaagtcaaccgaaccaaatcaaac 11695493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 44979805 - 44979897
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||| ||| ||||||||| |||||||||| ||||  ||||||||||  |||||| |||||||||||  |||| ||||||||||| || |||||    
T  44979805 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaaccgcaccg 44979897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 11375948 - 11375883
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgactttta 134  Q
    |||| ||| ||||||||| |||||||||||||||  ||||||||||  |||||| |||||||||||    
T  11375948 ttttaaaaatcaaccgaaccaaaccaaactgcatgtttttttatctcgcggtttggatgactttta 11375883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 15320598 - 15320707
Alignment:
Q  53 gtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatctt-acggtttagatgacttttaccctcataaccgaacca 151  Q
    ||||||||  |||| |||||| ||| ||||| ||| |||||| ||||||||  |||||  ||| ||||||| ||||||||||| ||||| || |||||||    
T  15320598 gtttggtttggattttattttaaaaatcaactgaaccaaacctaactgcatgcttttttacttcacggtttggatgacttttagcctcaaaatcgaacca 15320697  T
Q  152 acccacaccg 161  Q
    | || |||||    
T  15320698 aaccgcaccg 15320707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 20985896 - 20985949
Alignment:
Q  29 tccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaa 82  Q
    ||||| |||||||||||| |||||||||||||  |||| |||||| ||||||||    
T  20985896 tccaatccaaaccgcattagtttggtttggtttggattttattttaaaagtcaa 20985949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 44035353 - 44035269
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcata--ttttttatcttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||| ||| ||||||||| |||||||||| ||||   |||||||| || |||||| |||||||||||  |||| |||||||||||    
T  44035353 ttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttttattttgcggtttggatgacttttatgctcaaaaccgaaccaa 44035269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 33426547 - 33426639
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgca-tatttttt-atcttacggtttagatgacttttaccctca 140  Q
    ||||||| |||| | || |||||| ||| ||||  |||||||||||||||||| |||||||| |||||||| || | |||||||||| |||||    
T  33426547 ttggttttgttccgtttttattttaaaaatcaattgaatcaaaccaaactgcattattttttaatcttacgattcaaatgacttttaacctca 33426639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 46147313 - 46147198
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttac 117  Q
    ||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| |||||||||| || |||||||| | ||||  ||||||| |||||    
T  46147313 caccaaccgatccaacgtaaaccgcattggtttggtttggttcagattttattttaaaagtcaaccaaaccaaaccaatccgcatgcttttttaccttac 46147214  T
Q  118 ggtttagatgactttt 133  Q
    ||||||||||||||||    
T  46147213 ggtttagatgactttt 46147198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 48642882 - 48642745
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggtt-----cagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttttt-at 112  Q
    |||||| ||||||||||||||||||||| |||||||||||||     || |||  ||||||||||||||||||| |||||||||| |||| |||||| ||    
T  48642882 caccaatcgatccaacccaaaccgcattggtttggtttggtttggttcaaatttaatttttaaagtcaaccgaaccaaaccaaaccgcatgttttttaat 48642783  T
Q  113 cttacggtttagatgacttttaccctcataaccgaacc 150  Q
    ||| ||||| |||||| ||||||||||| |||||||||    
T  48642782 cttgcggttcagatgaattttaccctcaaaaccgaacc 48642745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 37375421 - 37375273
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaac-----tgcatatttttt--a 111  Q
    ||||||||||| |||||||||||||||| |||| ||||||||| |||||||||||||||||||||| || ||||||||||     ||||| ||||||  |    
T  37375421 caccaaccgattcaacccaaaccgcattggtttagtttggttcggattctatttttaaagtcaaccaaaccaaaccaaaccaaactgcatgtttttttta 37375322  T
Q  112 tcttacggtttagatgacttttaccctcataaccgaaccaacccacacc 160  Q
    |||| || ||| ||||| ||||||| ||| || ||||||||||| ||||    
T  37375321 tcttgcgatttggatgaattttaccatcaaaatcgaaccaacccgcacc 37375273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 23729485 - 23729369
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttac 117  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||||||| |||||| |||||||||||| | ||||||||| ||||  ||||||||||| |    
T  23729485 caccaaccgatccaaaccaaaccgtattagtttggtttggttcagattttattttaaaagtcaaccgagttaaaccaaaccgcatgcttttttatcttgc 23729386  T
Q  118 ggtttagatgactttta 134  Q
    ||||  ||||| |||||    
T  23729385 ggttcggatgattttta 23729369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 32942093 - 32942198
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||  ||||||||||| | |||  ||||||||||| ||||| |||||    
T  32942093 gtttggtttggttcggattgtattttaaaagtcaaccgaatcaaaccaaaccgcatgtttttttatcttgcagttcggatgacttttaacctcaaaaccg 32942192  T
Q  147 aaccaa 152  Q
    ||||||    
T  32942193 aaccaa 32942198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 8568534 - 8568682
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttg-----gttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattt-tttat 112  Q
    ||||||||||||||| |||||||||||| ||||| |||      |||| |||| |||||| ||||||||||||| | |||||||| ||||| || |||||    
T  8568534 caccaaccgatccaatccaaaccgcattagtttgatttcatttagttcggattttattttaaaagtcaaccgaaccgaaccaaaccgcatacttatttat 8568633  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||| |||||  ||||||||||| ||||| ||||||||||| || |||||    
T  8568634 cttgcggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccg 8568682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 20334649 - 20334565
Alignment:
Q  51 tggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattt-tttatcttacggtttagatgactttta 134  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| |||||||| |||||  || ||||||||    
T  20334649 tggtttggttcagattttatttttaaagtcaaccgaaccaaaccaaaccgcatatttatttatcttgcggttcggacgactttta 20334565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 40848953 - 40848805
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttgg-----tttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttat 112  Q
    ||||||||||| |||||||||||||||| ||||||     |||||||| |||| |||||| ||||||||||||| |||||||||| | ||  |||||||     
T  40848953 caccaaccgattcaacccaaaccgcattagtttggttttatttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgtatgtttttttac 40848854  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||||  ||   |||||||||||||||| ||||||||||| || |||||    
T  40848853 cttacaattcgaatgacttttaccctcaaaaccgaaccaaaccgcaccg 40848805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 23032742 - 23032649
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctca 140  Q
    ||||||||||||||| ||| |||||| ||||||||||||| ||||| ||||  |||| ||||||||||| ||||| |||||||||||| |||||    
T  23032742 gtttggtttggttcaaattttattttaaaagtcaaccgaaccaaactaaaccacatacttttttatctttcggttcagatgacttttagcctca 23032649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 43202526 - 43202446
Alignment:
Q  18 acaccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaact 99  Q
    ||||||||||||| || ||||||| |||| |||||||||| |||||||| |||||| ||||||||||||| |||||||||||    
T  43202526 acaccaaccgatc-aatccaaaccacattggtttggtttgattcagattgtattttaaaagtcaaccgaaccaaaccaaact 43202446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 524856 - 524967
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttac 117  Q
    |||||||| |||||||||||| || ||| ||||||||||     |||| |||||| |||||||| ||||||||||||||| ||||| ||||||||||| |    
T  524856 caccaacctatccaacccaaatcgaattggtttggtttg-----gattttattttaaaagtcaatcgaatcaaaccaaaccgcatatttttttatcttgc 524950  T
Q  118 ggtttagatgactttta 134  Q
    |||| |||| |||||||    
T  524951 ggttcagataactttta 524967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 8118296 - 8118399
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||||  |||  ||||||||||| |||||  ||| | ||||||||||| ||| |||    
T  8118296 ttggtttggttcagattttatttttaaaatcaaccgaaccaaaccaaaccacatgcttttttatcttgcggttcggataaattttaccctcaaaacagaa 8118395  T
Q  149 ccaa 152  Q
    ||||    
T  8118396 ccaa 8118399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 11399221 - 11399081
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggttt-----ggttcagattctatttttaaagtcaaccgaatcaaaccaaa--ctgcatatttttta 111  Q
    ||||||||||||||||||||||||||||||||||||||     |||||||||| |  ||| ||| | ||| ||| |||||||||  | |||| |||||||    
T  11399221 caccaaccgatccaacccaaaccgcatttgtttggtttagtttggttcagattgtgctttaaaatttaactgaaccaaaccaaaaaccgcatgtttttta 11399122  T
Q  112 tcttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||| |||||  ||||| ||||| ||||| || ||||||||    
T  11399121 tcttgcggttcggatgaattttagcctcaaaagcgaaccaa 11399081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 13852402 - 13852265
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtt 121  Q
    |||||| |||| |||||||||||| |||||||||||||  |||    |||| ||| ||||||||| |||||||||| ||||  ||||||||||  | |||    
T  13852402 aaccgaaccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcagtt 13852303  T
Q  122 tagatgacttttaccctcataaccgaaccaacccacac 159  Q
    | |||||||||||  |||| ||||||||||| ||||||    
T  13852302 tggatgacttttatgctcaaaaccgaaccaaaccacac 13852265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 30079572 - 30079715
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttg-----gtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttat 112  Q
    |||||||||||||||||||||||||||| |||||     |||| ||| ||||| |||||||||||||     ||||||||||||| ||||  ||||||||    
T  30079572 caccaaccgatccaacccaaaccgcattggtttgatttagtttcgtttagattttatttttaaagtc-----aatcaaaccaaaccgcatgcttttttat 30079666  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||||| ||  ||||||||||||| ||| || | |||||| ||| ||||    
T  30079667 cttacgattcggatgacttttaccttcaaaatcaaaccaaaccaaaccg 30079715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 31287794 - 31287886
Alignment:
Q  49 tttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctca 140  Q
    ||||| ||||||| |||  |||||| ||||||||||||| |||||||||| ||||| || |||||||||||||| |||||||| ||| |||||    
T  31287794 tttggattggttcggatcttattttaaaagtcaaccgaaccaaaccaaaccgcatacttatttatcttacggttcagatgactattagcctca 31287886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 49011317 - 49011217
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatcttacggtttagatgacttttaccctcataaccga 147  Q
    ||||||||||||||  |||  ||||| |||||||||||||||||||  ||| |||||||||||||||| | ||| | || ||||||| ||||| ||||||    
T  49011317 gtttggtttggttcgaatttcattttgaaagtcaaccgaatcaaacttaaccgcatattttttatcttgcagttcacataacttttagcctcaaaaccga 49011218  T
Q  148 a 148  Q
    |    
T  49011217 a 49011217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 26524926 - 26525017
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttttt 110  Q
    |||||||||||||||||| ||||||||| ||| |||||| ||  |||| |||||| ||||| ||||||| ||| |||||| |||| ||||||    
T  26524926 caccaaccgatccaaccctaaccgcattggttaggtttgattatgattttattttaaaagttaaccgaaccaacccaaaccgcatgtttttt 26525017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 35820101 - 35820204
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    |||||||||||||| |||| |||||| ||||||||||||| |||| ||||| ||||| ||||| | ||||||||| ||||||  |||| ||||| || ||    
T  35820101 gtttggtttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatactttttcagcttacggttcagatgaaatttagcctcaaaatcg 35820200  T
Q  147 aacc 150  Q
    ||||    
T  35820201 aacc 35820204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 10338799 - 10338869
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaa 92  Q
    |||||||||||| |||||||| |||  |||||||||||||||||| |||||| |||||||| |||| ||||    
T  10338799 caaccgatccaatccaaaccgaattgatttggtttggttcagattttattttaaaagtcaatcgaaccaaa 10338869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 10069240 - 10069148
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcatatttttt-atcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||| ||| |||||||||||||||||||| |||| |||||| || |  ||||||||||||||||||  |||| ||||||||||| || |||||    
T  10069240 ttttaaaaatcaaccgaatcaaaccaaacagcatgtttttttatatcgcggtttagatgacttttatgctcaaaaccgaaccaaaccgcaccg 10069148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 24361488 - 24361594
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttttt-atcttacggtt 121  Q
    |||||| |||| |||||||||||| ||||||||||| |  ||||   |||||||| ||||| ||| ||||||||||  ||| |||||| |||| ||||||    
T  24361488 aaccgaaccaatccaaaccgcattggtttggtttggat--gatt---tttttaaaatcaactgaaccaaaccaaaccacatgtttttttatctcacggtt 24361582  T
Q  122 tagatgactttt 133  Q
    ||||||||||||    
T  24361583 tagatgactttt 24361594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 6880090 - 6880127
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgtttggtttggtt 60  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  6880090 aaccgatccaacccaaaccgcatttgttttgtttggtt 6880127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 27456457 - 27456341
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgtttggtttggttcag-----attctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatctta 116  Q
    ||||| |||||||||| ||||||| ||||||||||| ||||     ||| |||||| ||||||||| |||  ||||||||| ||||  ||||||||| ||    
T  27456457 aaccgctccaacccaa-ccgcattggtttggtttggatcagtttgaattttattttaaaagtcaacagaactaaaccaaaccgcatgcttttttatcgta 27456359  T
Q  117 cggtttagatgactttta 134  Q
    ||||| ||||||||||||    
T  27456358 cggttcagatgactttta 27456341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 31983032 - 31983117
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaaccaacc 154  Q
    |||| ||| ||||| ||| |||||||||||||||| ||||||||||  |||||| ||| |||||||  |||| |||||||||||||    
T  31983032 ttttaaaaatcaactgaaccaaaccaaactgcatatttttttatctcgcggtttggataacttttatgctcaaaaccgaaccaacc 31983117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 20306704 - 20306645
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaa 82  Q
    |||| ||||||| |||||| |||| |||||||||||||| |||| |||||| ||||||||    
T  20306704 aaccaatccaactcaaaccacattggtttggtttggttcggattttattttaaaagtcaa 20306645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 30855159 - 30855058
Alignment:
Q  45 tttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatcttacggtttagatgacttttaccctcataac 144  Q
    ||||||||||||| |||||||| |||||||||| ||     |||||||||||| | ||| |||||||||||   |||| ||||||||||||| | | |||    
T  30855159 tttgtttggtttgattcagattttatttttaaaatc-----aatcaaaccaaattacat-ttttttatcttgtagtttggatgacttttacctttaaaac 30855066  T
Q  145 cgaaccaa 152  Q
    ||||||||    
T  30855065 cgaaccaa 30855058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 7697386 - 7697345
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggtt 60  Q
    |||||||||||| || |||||||||||| |||||||||||||    
T  7697386 caccaaccgatcaaatccaaaccgcattggtttggtttggtt 7697345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 12117686 - 12117613
Alignment:
Q  30 ccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat 103  Q
    |||| |||||||||||| |||||||||||||  |||    |||| ||| ||||||||| |||||||||||||||    
T  12117686 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcat 12117613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 16535759 - 16535859
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    |||||||||||| |||| |||||| ||||||||||||| | ||  |||| ||||  ||||||| ||| ||||||  |||||||||| ||||| || ||||    
T  16535759 ttggtttggttcggattttattttaaaagtcaaccgaacctaatgaaaccgcatgtttttttaacttgcggtttgcatgacttttagcctcaaaatcgaa 16535858  T
Q  149 c 149  Q
    |    
T  16535859 c 16535859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 149
Target Start/End: Complemental strand, 16629903 - 16629803
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    |||||||||||| |||| |||||| ||||||||||||| | ||  |||| ||||  ||||||| ||| ||||||  |||||||||| ||||| || ||||    
T  16629903 ttggtttggttcggattttattttaaaagtcaaccgaacctaatgaaaccgcatgtttttttaacttgcggtttgcatgacttttagcctcaaaatcgaa 16629804  T
Q  149 c 149  Q
    |    
T  16629803 c 16629803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 21237792 - 21237840
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaac 98  Q
    |||||||| |||||||| |||||| |||||||| | |||||||||||||    
T  21237792 ttggtttgattcagattttattttaaaagtcaatcaaatcaaaccaaac 21237840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 29211663 - 29211767
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatcttacggtttagatgacttttaccctcataaccga 147  Q
    |||||||||||||| |||| |||||  ||| || ||||||  |||||||||||||  ||||||||||| | |||   |||| ||||| ||| | ||||||    
T  29211663 gtttggtttggttcggattgtatttcaaaaatcgaccgaacgaaaccaaactgcaagttttttatcttgcagttcgaatgagttttagccttaaaaccga 29211762  T
Q  148 accaa 152  Q
    |||||    
T  29211763 accaa 29211767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 32237730 - 32237666
Alignment:
Q  35 ccaaaccgcatttgtttggtttggttcagattctattttt-aaagtcaaccgaatcaaaccaaac 98  Q
    |||||||||||| |||| |||||||||  ||| ||||||| ||||||||||||| | ||||||||    
T  32237730 ccaaaccgcattggtttagtttggttcgaattttatttttaaaagtcaaccgaaccgaaccaaac 32237666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 17144713 - 17144848
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggtt-----cagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatctta 116  Q
    |||||||||||||||||||| |||| |||||| ||||||     | ||||||||||| ||||||||||||| |||||||| | ||||| ||||||||||     
T  17144713 caaccgatccaacccaaaccacattggtttggcttggtttgcttcggattctattttaaaagtcaaccgaaccaaaccaatccgcatactttttatcttg 17144812  T
Q  117 cggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||||| ||||||||||| ||||| |||||||||||    
T  17144813 cggtttggatgacttttagcctcaaaaccgaaccaa 17144848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 38651982 - 38652116
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatcttacggtt 121  Q
    ||||||||||||||||||||||||| |||||||||||     ||  |||||||||||||||||||| |||||||||| |||||||||||||||| || ||    
T  38651982 caaccgatccaacccaaaccgcattagtttggtttgg-----atattatttttaaagtcaaccgaaccaaaccaaaccgcatattttttatcttgcgatt 38652076  T
Q  122 tagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
      ||||||||||||| ||| |||| |||||| || |||||    
T  38652077 cggatgacttttaccttcaaaaccaaaccaaaccgcaccg 38652116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 55467627 - 55467770
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttac 117  Q
    ||||||| ||||||| |||||||||||| ||||| |||||||| |||| |||||| ||||||||||||| |||||||||| ||||| || |||||||| |    
T  55467627 caccaactgatccaatccaaaccgcattggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttatttatcttgc 55467726  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
     |||  ||||||||||| ||||| ||||||||||| || |||||    
T  55467727 agttcggatgacttttagcctcaaaaccgaaccaaaccgcaccg 55467770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 42363213 - 42363344
Alignment:
Q  26 cgatccaacccaaaccgcatttgtt----tggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggt 120  Q
    |||||||| |||||||||||| |||    ||||||||||| |||| | |||||||||||||||||| |||||||||| |||| |||||||||||| ||||    
T  42363213 cgatccaaaccaaaccgcattggttgatttggtttggttcggattttgtttttaaagtcaaccgaaccaaaccaaaccgcatgattttttatcttgcggt 42363312  T
Q  121 ttagatgacttttaccctcataaccgaaccaa 152  Q
    | | || ||||||||||||| |||||||||||    
T  42363313 tcaaattacttttaccctcaaaaccgaaccaa 42363344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 54122089 - 54121996
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctca 140  Q
    |||||||||||||| |||| |||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||  ||||||||||| |||||    
T  54122089 gtttggtttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttttttatcttacggttcggatgacttttaacctca 54121996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 26758326 - 26758187
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggtt-----cagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttat 112  Q
    ||||||||||| |||||||||||||||| |||| ||||||||     |||| | |||||| ||||||||||||| |||||||||| | ||| || |||||    
T  26758326 caccaaccgatacaacccaaaccgcattggtttagtttggtttggatcagactttattttaaaagtcaaccgaaccaaaccaaaccgtatacttatttat 26758227  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    ||| |||||  ||||||||||| ||| | |||||||||||    
T  26758226 cttgcggttcggatgacttttaaccttaaaaccgaaccaa 26758187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 50578988 - 50579065
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaa 97  Q
    |||||||| |||||||||||||| |||| |||||||||| ||| |||| |||||||||||||||||||| |||||||||    
T  50578988 caccaaccaatccaacccaaaccacattggtttggtttg-ttcggattttatttttaaagtcaaccgaagcaaaccaaa 50579065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 20846573 - 20846433
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttca----gattctatttttaaagtcaaccgaatcaaaccaaactgcat---atttttta 111  Q
    |||||||||||||||||||||||||||| ||||| |||||||      |||| |||||| ||||||||||||| |||||||||  ||||    |||||||    
T  20846573 caccaaccgatccaacccaaaccgcattggtttgatttggttggtttggattttattttaaaagtcaaccgaaccaaaccaaagcgcatgtattttttta 20846474  T
Q  112 tcttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||| |||||  |||||||||||| |||  |||||||||||    
T  20846473 tcttgcggttcggatgacttttactctcgaaaccgaaccaa 20846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 44651030 - 44650918
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    |||||||||||| |||| ||||||||||||||||| || |||||||||| ||||  ||||||||  ||||| |  ||||||||||||||||| ||| |||    
T  44651030 ttggtttggttcggattttatttttaaagtcaaccaaaccaaaccaaaccgcatgtttttttattctacggctcggatgacttttaccctcaaaactgaa 44650931  T
Q  149 ccaacccacaccg 161  Q
     ||| ||||||||    
T  44650930 tcaaaccacaccg 44650918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 45629274 - 45629147
Alignment:
Q  35 ccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgactttt 133  Q
    |||||||| ||| ||||| |||||||| || | |||||| |||||||||| |||||||||||| |||||| || |||||||| |||||  ||||||||||    
T  45629274 ccaaaccgtattggtttgatttggttcggagtttattttaaaagtcaaccaaatcaaaccaaattgcatacttatttatcttgcggttcggatgactttt 45629175  T
Q  134 accctcataaccgaaccaacccacaccg 161  Q
    | ||| | ||||||| ||| ||| ||||    
T  45629174 aaccttaaaaccgaatcaaaccaaaccg 45629147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 26291971 - 26292057
Alignment:
Q  49 tttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgca-tattttttatcttacggtttagatgactttta 134  Q
    ||||||||||||||||||||||||| ||| ||||||||| |||| ||||| |||  |||||||||||| |||||| ||||| |||||    
T  26291971 tttggtttggttcagattctattttaaaaatcaaccgaaccaaagcaaaccgcacaattttttatcttgcggtttggatgattttta 26292057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 38680886 - 38680788
Alignment:
Q  36 caaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatcttacggtttagatgactttta 134  Q
    ||||||| ||| ||||||||||||||| ||| |||||| |||||||||  || | ||||||||  ||| |||||||| ||||||||| |||||||||||    
T  38680886 caaaccgaattggtttggtttggttcaaattttattttaaaagtcaacttaaccgaaccaaacctcatgttttttatattacggtttggatgactttta 38680788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 37045406 - 37045326
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactg 100  Q
    ||||||||||| |||||||||||  ||| |||||||||||||| |||| || |||||||| |||||||| ||||||||||||    
T  37045406 caccaaccgatacaacccaaaccatattggtttggtttggttcggatttta-ttttaaagccaaccgaaccaaaccaaactg 37045326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 10481660 - 10481764
Alignment:
Q  49 tttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatat-tttttatcttacggtttagatgacttttaccctcataaccga 147  Q
    ||||||||| |||| ||| |||||| ||||||||||||| ||||||||||||| | | ||||||||||  ||||   |||||||||| ||||| ||||||    
T  10481660 tttggtttgattcaaattttattttaaaagtcaaccgaaccaaaccaaactgcgtgtctttttatcttgtggttccaatgacttttatcctcaaaaccga 10481759  T
Q  148 accaa 152  Q
    |||||    
T  10481760 accaa 10481764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 2566315 - 2566449
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattt-tttatcttac 117  Q
    ||||||||||||||| ||||||| ||||  ||| |||||||||| ||| |||||| ||| | || |||| | ||||||||  ||||||| ||||||||      
T  2566315 caccaaccgatccaatccaaaccacattgattttgtttggttcaaattttattttaaaacttaatcgaaccgaaccaaaccacatatttctttatcttgt 2566414  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||| |||||||||||| | ||| || ||||||||    
T  2566415 ggttcagatgacttttagcatcaaaatcgaaccaa 2566449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 2832374 - 2832527
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttg-----tttggtttggttcagattctatttttaaagtcaaccg-----aatcaaaccaaactgcat-attt 107  Q
    |||||||||||| ||||||||||||||| |     ||||||||| ||| |||| |||||| |||||||||||     || |||||||||| ||||  |||    
T  2832374 caccaaccgatcaaacccaaaccgcattggtttgatttggtttgattcggattttattttaaaagtcaaccgaaccaaaccaaaccaaaccgcatgcttt 2832473  T
Q  108 tttatcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||||||||  ||||  ||||||||||| ||||| |||| |||||| ||||||||    
T  2832474 tttatcttgtggttcggatgacttttagcctcaaaaccaaaccaaaccacaccg 2832527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 51191799 - 51191711
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttttt 110  Q
    ||||||| |||| |||||||||||  |||||||||||||| | ||  ||||| |||  |||||||| |||||||||| |||||||||||    
T  51191799 caaccgaaccaatccaaaccgcatcggtttggtttggttcggttttcattttaaaatccaaccgaaccaaaccaaaccgcatatttttt 51191711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 8557942 - 8558077
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgttt-----ggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgc-atattttttatctta 116  Q
    ||||||||| |||||||||||||| ||||     |||||||||| |||| ||||||||||||||| | || | |||||||| || |  |||||||||||     
T  8557942 aaccgatccgacccaaaccgcattggtttggtttggtttggttcggattttatttttaaagtcaatcaaaccgaaccaaaccgcaagcttttttatcttg 8558041  T
Q  117 cggtttagatgacttttaccctcataaccgaaccaa 152  Q
    | |||  | ||||||||||||||| |||| ||||||    
T  8558042 cagttcgggtgacttttaccctcaaaaccaaaccaa 8558077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 152
Target Start/End: Original strand, 21586879 - 21586962
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||| ||| ||||| |||||||||||||||||||  ||||||||||  |||||| |||||||||||  |||| |||||||||||    
T  21586879 ttttaaaaatcaactgaatcaaaccaaactgcatgcttttttatctcgcggtttggatgacttttaagctcaaaaccgaaccaa 21586962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 52632131 - 52632057
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaac 98  Q
    |||||||| ||||||||||||| |||||     |||||||||| |||| |||||| ||||| ||||||||||||||||||    
T  52632131 caccaaccaatccaacccaaactgcatt-----ggtttggttcggattgtattttaaaagttaaccgaatcaaaccaaac 52632057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 25465898 - 25465821
Alignment:
Q  18 acaccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaacca 95  Q
    |||| ||||| ||||||||||| || ||| |||||||||||||| |||| |||||| |||||||| | || |||||||    
T  25465898 acactaaccggtccaacccaaatcgtattggtttggtttggttcggattttattttaaaagtcaatcaaaccaaacca 25465821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 27054166 - 27054087
Alignment:
Q  25 ccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata 104  Q
    ||||||||| ||||| |||||| |||||||||||||   ||| |||||| ||| |||||| || ||||||||| ||||||    
T  27054166 ccgatccaatccaaatcgcattggtttggtttggtttgaattttattttaaaattcaaccaaaccaaaccaaaatgcata 27054087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 4554785 - 4554747
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggtt 60  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  4554785 caaccgatccaactcaaaccgcattagtttggtttggtt 4554747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 5681485 - 5681526
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggtt 60  Q
    |||| ||||||||||||||||||||||| ||| |||||||||    
T  5681485 caccgaccgatccaacccaaaccgcattggttaggtttggtt 5681526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 35402201 - 35402281
Alignment:
Q  30 ccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttttt 110  Q
    |||| |||||||||||| |||||||||||||  |||    |||| ||| ||||||||| |||||||||| |||| ||||||    
T  35402201 ccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtttttt 35402281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 37044931 - 37044875
Alignment:
Q  105 ttttttatcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||||||||||| |||||| |||||||||| | |||| ||||||||||| || |||||    
T  37044931 ttttttatcttgcggtttggatgactttttctctcaaaaccgaaccaaaccgcaccg 37044875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 27572025 - 27572173
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgttt-----ggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttat 112  Q
    |||||||||||||||||||||||||||| ||||     |||||||||| |||| |||||| |||| |||||||| |||||||||| ||||  |||||||     
T  27572025 caccaaccgatccaacccaaaccgcattggtttggtttggtttggttcggattttattttaaaagacaaccgaaccaaaccaaaccgcatgcttttttac 27572124  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||| |||||  ||||||||||| ||||| ||||||||||| || |||||    
T  27572125 cttgcggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccg 27572173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 14652550 - 14652459
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttttt 110  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||| |||| ||||  |||| ||||||    
T  14652550 caccaaccgatccaacccaaatcgcattggtttggtttggttcagattttatttttaaagtcaactgaaccaaatcaaatcgcatgtttttt 14652459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 25495153 - 25495048
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattt-tttatcttacggtttagatgacttttaccctcataaccg 146  Q
    ||||||||| |||| |||| |||||| ||| |||||||||  ||||||||||||||| || ||||| || |||||||||||||||||| ||||| |||||    
T  25495153 gtttggttttgttcggattttattttaaaaatcaaccgaaaaaaaccaaactgcatacttatttatgttgcggtttagatgacttttagcctcaaaaccg 25495054  T
Q  147 aaccaa 152  Q
    ||||||    
T  25495053 aaccaa 25495048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 6633414 - 6633341
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaacca 95  Q
    ||||||||||||| |||||| |||| ||||||||||||||||||| |||||| |||||||||| || |||||||    
T  6633414 caaccgatccaactcaaaccacattggtttggtttggttcagattttattttaaaagtcaaccaaaccaaacca 6633341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 35240838 - 35240943
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    |||||||||||||| |||| |||||||||||||||||||| |||| ||||| ||||| ||||| | |||||||||  ||||| ||||| ||||| || ||    
T  35240838 gtttggtttggttcggattttatttttaaagtcaaccgaaccaaatcaaaccgcatactttttcagcttacggttcggatgaattttagcctcaaaatcg 35240937  T
Q  147 aaccaa 152  Q
    ||||||    
T  35240938 aaccaa 35240943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 18845609 - 18845545
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaac 83  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||| |||||| ||| |||||    
T  18845609 caccaaccgatccaacccaaaccgcagtggtttggtttggttcagattttattttaaaactcaac 18845545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 32244370 - 32244493
Alignment:
Q  28 atccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagat 126  Q
    |||||| |||||  ||||||||||| |||||||| |||| |||||| ||||||||||||| |||| ||||| ||||| ||||| | ||||||||| ||||    
T  32244370 atccaatccaaattgcatttgtttgatttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatactttttcagcttacggttcagat 32244469  T
Q  127 gacttttaccctcataaccgaacc 150  Q
    ||  |||| ||||| || ||||||    
T  32244470 gaaatttaacctcaaaatcgaacc 32244493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 2589067 - 2588938
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttttt-atcttac 117  Q
    |||||||||||||||||||||||||||      | |||||||| || | |||||| |||||||||| || |||||||||| |||| |||||| |||||||    
T  2589067 caccaaccgatccaacccaaaccgcatc-----gatttggttctgaatttattttaaaagtcaaccaaaccaaaccaaaccgcatgtttttttatcttac 2588973  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||| | ||||||||||  |||| || ||||||||    
T  2588972 ggttcaaatgacttttagtctcaaaatcgaaccaa 2588938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 20191968 - 20192095
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttttt-atcttacggtt 121  Q
    |||||||||||  ||||||||||| ||||| ||| |||| |||| |||||| ||||||||||||| |||| ||||   ||| |||||| ||||| | |||    
T  20191968 aaccgatccaattcaaaccgcattggtttgatttagttcggattttattttaaaagtcaaccgaaccaaatcaaatcacatgttttttaatcttgcagtt 20192067  T
Q  122 tagatgacttttaccctcataaccgaac 149  Q
     |||||||||||| | ||| ||||||||    
T  20192068 cagatgacttttaacatcaaaaccgaac 20192095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 11402692 - 11402569
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttg----gtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatct 114  Q
    ||||||| |||| |||||||||| |||| |||||    |||||||||  ||| | ||||||||||||||||   ||||| |||| |||| ||||||||||    
T  11402692 caccaactgatctaacccaaaccacattggtttgtctggtttggttcgaattttgtttttaaagtcaaccgggccaaacaaaaccgcatgttttttatct 11402593  T
Q  115 tacggtttagatgacttttaccct 138  Q
    | || |||||||| ||||||||||    
T  11402592 tgcgatttagatggcttttaccct 11402569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 22747553 - 22747688
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttg-----gttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatat-tttttat 112  Q
    |||||||||||||||||||||| ||||| ||||||||||     ||||| ||| |||||| |||||||| |||| |||| ||||| |||| |  ||||||    
T  22747553 caccaaccgatccaacccaaactgcattagtttggtttggttttgttcaaattttattttaaaagtcaatcgaaccaaatcaaaccgcatgtacttttat 22747652  T
Q  113 cttacggtttagatgacttttaccctcataaccgaac 149  Q
    ||| |||||  |||||| |||| ||||| ||||||||    
T  22747653 cttgcggttcggatgac-tttagcctcaaaaccgaac 22747688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 30265827 - 30265919
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||| ||| ||||||||| |||||||||||||||  ||||||||||| |||||||||||| |||||  |||| |||| |||||| || |||||    
T  30265827 ttttaaaaatcaaccgaaccaaaccaaactgcatgtttttttatcttgcggtttagatgatttttatgctcaaaaccaaaccaaaccgcaccg 30265919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 41454966 - 41454882
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggttt-----ggttcagattctatttttaaagtcaaccgaatcaaaccaaac 98  Q
    ||||||| ||||||| |||||||||||| |||||||||     |||||||||| |||||| ||||||||||||| | ||||||||    
T  41454966 caccaacagatccaatccaaaccgcattggtttggtttggtttggttcagattttattttaaaagtcaaccgaaccgaaccaaac 41454882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 17132104 - 17132183
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagat 126  Q
    |||||||||||||| |||| |||||| ||||||||||||| |||| ||||| ||||| ||||| | ||||||||| ||||    
T  17132104 gtttggtttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatactttttcagcttacggttcagat 17132183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 40884397 - 40884286
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    ||||||||||| | ||| |||||| |||||| ||||||  ||||||||| ||||| ||||||||||| |||||   |||||||||| ||||| || ||||    
T  40884397 ttggtttggtttaaattttattttaaaagtcgaccgaactaaaccaaacagcatacttttttatcttgcggttcgaatgacttttaacctcaaaatcgaa 40884298  T
Q  149 ccaacccacacc 160  Q
    |||  |||||||    
T  40884297 ccacaccacacc 40884286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 28224848 - 28224964
Alignment:
Q  18 acaccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattt-tttatctta 116  Q
    |||||||| |||||||  ||||||  | | |||||||||||||  |||| |||||| |||   ||||||| ||||||||||||||||||| ||||||||     
T  28224848 acaccaactgatccaattcaaaccatactggtttggtttggtttggattttattttaaaaaagaaccgaaacaaaccaaactgcatatttatttatcttg 28224947  T
Q  117 cggtttagatgactttt 133  Q
    || |||  |||||||||    
T  28224948 cgttttgcatgactttt 28224964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 36567814 - 36567692
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttac 117  Q
    ||||||||||||||| ||||||||||||     |||||||||   ||| |||||| |||||||||| || | |||||||| ||||| || || |||||||    
T  36567814 caccaaccgatccaatccaaaccgcatt-----ggtttggtttgaattttattttaaaagtcaaccaaaccgaaccaaaccgcatacttattcatcttac 36567720  T
Q  118 ggtttagatgacttttaccctcataacc 145  Q
    ||||  ||| ||||||| ||||| ||||    
T  36567719 ggttcggataacttttaacctcaaaacc 36567692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 40692561 - 40692463
Alignment:
Q  49 tttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatattttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    ||||||||| |||| ||| |||||| ||||||||||||| |||||||||  ||||  |||||||||| | ||||  ||||||| || ||||| |||||||    
T  40692561 tttggtttgattca-attttattttaaaagtcaaccgaaccaaaccaaatcgcatgctttttatcttgcagtttgaatgacttctagcctcaaaaccgaa 40692463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 42544696 - 42544613
Alignment:
Q  79 tcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||||||||| |||||||||| ||||  ||||||||||  |||||||||||||||||   |||| ||||||| ||| ||||||||    
T  42544696 tcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttagatgacttttttgctcaaaaccgaagcaaaccacaccg 42544613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 6595077 - 6595039
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggtt 60  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  6595077 caaccgatccaacccaaaccacattagtttggtttggtt 6595039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 12166200 - 12166284
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgacttttaccctcataaccgaaccaacc 154  Q
    |||| ||| ||||||||| |||||||||||||||  ||||||||||  || ||| |||||||||||  |||| |||||||||||||    
T  12166200 ttttaaaaatcaaccgaaccaaaccaaactgcatgcttttttatctcgcgattttgatgacttttatgctca-aaccgaaccaacc 12166284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 32721658 - 32721695
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggt 59  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  32721658 caaccgatccagctcaaaccgcatttgtttggtttggt 32721695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 38176464 - 38176511
Alignment:
Q  18 acaccaaccgatccaacccaaaccgcatttgtttggtttggttcagatt 66  Q
    ||||||||||||||||||||| ||||  ||| |||||||||||||||||    
T  38176464 acaccaaccgatccaacccaacccgc-gttggttggtttggttcagatt 38176511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 38203688 - 38203735
Alignment:
Q  18 acaccaaccgatccaacccaaaccgcatttgtttggtttggttcagatt 66  Q
    ||||||||||||||||||||| ||||  ||| |||||||||||||||||    
T  38203688 acaccaaccgatccaacccaacccgc-gttggttggtttggttcagatt 38203735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 40331510 - 40331554
Alignment:
Q  54 tttggttcagattctatttttaaagtcaaccgaatcaaaccaaac 98  Q
    |||||||| |||| |||||| ||||||||||||| ||||||||||    
T  40331510 tttggttcggattttattttaaaagtcaaccgaaccaaaccaaac 40331554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 19135127 - 19135241
Alignment:
Q  49 tttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata--ttttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    |||||||||||||| ||| |||||| ||||||||||||| |||||||||| |||||  ||||||| ||| ||||| |||||||||||  ||||| |||||    
T  19135127 tttggtttggttcatattttattttaaaagtcaaccgaaccaaaccaaaccgcatattttttttacctttcggttcagatgactttttgcctcaaaaccg 19135226  T
Q  147 aaccaacccacaccg 161  Q
    |||||| ||||||||    
T  19135227 aaccaaaccacaccg 19135241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 32190650 - 32190789
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcag-----attctatttttaaagtcaaccgaatcaaaccaaactgcatatttttt-at 112  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||     ||| |||||| ||||| |||| |||||||||||||  ||| |||||| ||    
T  32190650 caccaaccgatccaactcaaactgcatttgtttggtttggtttagtttggattttattttaaaagttaaccaaatcaaaccaaacctcatgtttttttat 32190749  T
Q  113 cttacggtttagatgacttttaccctcataaccgaaccaa 152  Q
    | ||||||| |||||||||||| ||||| || ||||||||    
T  32190750 catacggttcagatgacttttagcctcaaaatcgaaccaa 32190789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 28610712 - 28610580
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata--ttttttatcttacgg 119  Q
    ||||||| |||| |||||||||||| |||||||||||||||| ||  ||||| |||| ||||| || ||||| |||||| |||  ||||||||||||||     
T  28610712 caaccgaaccaatccaaaccgcattagtttggtttggttcagttttcattttaaaagccaaccaaaccaaactaaactgaatattttttttatcttacga 28610613  T
Q  120 tttagatgacttttaccctcataaccgaaccaa 152  Q
    || |||||| |||||| || | |||||||||||    
T  28610612 ttcagatgatttttactcttaaaaccgaaccaa 28610580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 9686150 - 9686021
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttac 117  Q
    ||||||| ||||||| ||||||||||||     |||||||||| |||| |||||| ||||| ||||||| |||||||||| ||||| || |||||||| |    
T  9686150 caccaactgatccaatccaaaccgcatt-----ggtttggttcggattttattttaaaagttaaccgaaccaaaccaaaccgcatacttatttatcttgc 9686056  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaa 152  Q
    |||| |||||||||| | ||||| || ||||||||    
T  9686055 ggttcagatgactttgagcctcaaaatcgaaccaa 9686021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 31945420 - 31945552
Alignment:
Q  25 ccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggttta 123  Q
    ||||||||| |||||||||||| | |||||||| ||  |||| |||||| ||||||||||||| |||| |     ||||| |||||||||||||||||      
T  31945420 ccgatccaatccaaaccgcattggattggtttgattttgattttattttaaaagtcaaccgaaccaaaac-----gcatacttttttatcttacggttcg 31945514  T
Q  124 gatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    ||||||||||| ||||| ||||||| ||| ||||||||    
T  31945515 gatgacttttaacctcaaaaccgaaacaaaccacaccg 31945552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 22413940 - 22413808
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttg-----gttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttat 112  Q
    ||||||||||||||  |||||||||||| |||| |||||     ||||||||| |||||| ||||||||||||| |||||||||| ||||| || |||||    
T  22413940 caccaaccgatccattccaaaccgcattggtttcgtttgtttttgttcagattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttatttat 22413841  T
Q  113 cttacggtttagatgacttttaccctcataacc 145  Q
    |||  ||||  ||||||||||| ||||| ||||    
T  22413840 cttctggttcggatgacttttaacctcaaaacc 22413808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 24644943 - 24645071
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttac 117  Q
    |||| |||||||||| |||||| ||||| ||||||||||     |||| |||||| |||||||| ||||||||||||||| ||||| || |||||||| |    
T  24644943 cacccaccgatccaatccaaactgcattggtttggtttg-----gattttattttaaaagtcaa-cgaatcaaaccaaaccgcatacttatttatcttgc 24645036  T
Q  118 ggtttagatgacttttaccctcataaccgaaccaa 152  Q
    ||||  ||||||||||| ||||| || ||||||||    
T  24645037 ggttcggatgacttttaacctcaaaatcgaaccaa 24645071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 14940562 - 14940648
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttttt 110  Q
    |||||||| |||||||||||||||| ||     |||||||||| |||| |||||  ||||||||||||| ||||||||||||||| ||||||    
T  14940562 caccaaccaatccaacccaaaccgcgtt-----ggtttggttcggattttatttaaaaagtcaaccgaaccaaaccaaactgcatgtttttt 14940648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 12108549 - 12108638
Alignment:
Q  19 caccaaccgatccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcatatttt 108  Q
    |||||||||||| ||| |||||| |||| ||||||||||||||| | | |||||| ||||||||| ||| |||| ||||| |||| ||||    
T  12108549 caccaaccgatctaacgcaaaccacattggtttggtttggttcaaactatattttaaaagtcaactgaaccaaaacaaaccgcatgtttt 12108638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 29048193 - 29048081
Alignment:
Q  50 ttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    ||||||| |||| |||| |||||| ||||||||||||| |||||||||  ||| |  |||||| |||| ||||| ||||||||||| ||| | |||||||    
T  29048193 ttggtttagttcggattttattttaaaagtcaaccgaaccaaaccaaatcgcacacctttttaccttatggtttggatgacttttaaccttaaaaccgaa 29048094  T
Q  149 ccaacccacaccg 161  Q
    |||| || |||||    
T  29048093 ccaaaccgcaccg 29048081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 25006362 - 25006446
Alignment:
Q  65 ttctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaa 148  Q
    ||||||||| |||| |||| ||| |||||||| |  |||| ||||||||||||||||| ||||||| |||| ||||| |||||||    
T  25006362 ttctattttaaaagccaactgaaccaaaccaacccacatacttttttatcttacggttaagatgacatttaacctcaaaaccgaa 25006446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 28633034 - 28632918
Alignment:
Q  22 caaccgatccaacccaaaccgcatttgtttggtt-----tggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatctt 115  Q
    |||||||||||||| ||||||||||  |||||||     ||||||| ||  |||||| ||||||||||||| ||||| |||  ||||  |||||||||||    
T  28633034 caaccgatccaaccaaaaccgcattgatttggttcggtttggttcaaatattattttaaaagtcaaccgaaccaaacaaaatcgcatgtttttttatctt 28632935  T
Q  116 acggtttagatgacttt 132  Q
    |||||||  ||||||||    
T  28632934 acggtttgaatgacttt 28632918  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 6266985 - 6266858
Alignment:
Q  30 ccaacccaaaccgcatttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatga 128  Q
    |||| ||||| | ||||||||||||||||||    ||| ||||| ||||||||||| | |||||||||| ||||  |||||||| ||||||||  |||||    
T  6266985 ccaatccaaaacacatttgtttggtttggtt----ttc-attttaaaagtcaaccgtaccaaaccaaaccgcatgtttttttattttacggttcggatga 6266891  T
Q  129 cttttaccctcataaccgaaccaacccacaccg 161  Q
    || ||| ||||| ||||| ||||| || |||||    
T  6266890 ctattaacctcaaaaccgtaccaaaccgcaccg 6266858  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 29128970 - 29129057
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgactttta 134  Q
    |||||||||||||| |||| |||||| ||| ||||| |||||||| |||||| |||  |||||||| || ||||| | ||||||||||    
T  29128970 gtttggtttggttcggattttattttaaaaatcaacggaatcaaatcaaactacatgcttttttatattgcggttcatatgactttta 29129057  T

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Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 30752572 - 30752513
Alignment:
Q  75 aaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgactttt 133  Q
    ||||||||||||| |||||||||| ||||  ||||||||||| ||||| |||||||||||    
T  30752572 aaagtcaaccgaaccaaaccaaaccgcatgcttttttatcttgcggttcagatgactttt 30752513  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 892352 - 892442
Alignment:
Q  45 tttgtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcat-attttttatcttacggtttagatgactttta 134  Q
    |||||||||||| |||| |||  |||||| ||||| ||||||| |||||||||| ||||  |||||||| || |||||  |||||||||||    
T  892352 tttgtttggtttagttcggatgttattttaaaagttaaccgaaccaaaccaaaccgcatgtttttttattttgcggttcggatgactttta 892442  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 10590897 - 10590805
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||| ||| ||||||||| |||||||||| ||||  ||||||||||  | |||| |||||||||||  |||| ||||||||||| || |||||    
T  10590897 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcagtttggatgacttttatgctcaaaaccgaaccaaaccgcaccg 10590805  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 35040246 - 35040338
Alignment:
Q  70 tttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccgaaccaacccacaccg 161  Q
    |||| ||| |||||| || |||||||||| ||||  ||||||||||  |||||| |||||||||||  |||| ||||||||||| || |||||    
T  35040246 ttttaaaaatcaaccaaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaaccgcaccg 35040338  T

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Target: scaffold0015 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 62468 - 62365
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaactgcata-ttttttatcttacggtttagatgacttttaccctcataaccg 146  Q
    |||||||||||||| |||| |||||| ||||||||||||| |||| ||||| ||||| ||||||| ||||||||| ||||||  |||| ||||| || ||    
T  62468 gtttggtttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatacttttttagcttacggttcagatgaaatttagcctcaaaatcg 62369  T
Q  147 aacc 150  Q
    ||||    
T  62368 aacc 62365  T

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Target: scaffold0688 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 1195 - 1116
Alignment:
Q  79 tcaaccgaatcaaaccaaactgcatattttttatcttacggtttagatgacttttaccctcataaccgaaccaacccaca 158  Q
    ||||||||| || |||||||  ||| ||||||||||| |||||  ||||||||||| ||||| ||||||||||| |||||    
T  1195 tcaaccgaaccacaccaaaccacatgttttttatcttgcggttcggatgacttttagcctcaaaaccgaaccaaaccaca 1116  T

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Target: scaffold0688; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 7764 - 7685
Alignment:
Q  79 tcaaccgaatcaaaccaaactgcatattttttatcttacggtttagatgacttttaccctcataaccgaaccaacccaca 158  Q
    ||||||||| || |||||||  ||| ||||||||||| |||||  ||||||||||| ||||| ||||||||||| |||||    
T  7764 tcaaccgaaccacaccaaaccacatgttttttatcttgcggttcggatgacttttagcctcaaaaccgaaccaaaccaca 7685  T

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Target: scaffold0664 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 6094 - 6057
Alignment:
Q  23 aaccgatccaacccaaaccgcatttgtttggtttggtt 60  Q
    |||||||||||||||||||||||| |||||||||||||    
T  6094 aaccgatccaacccaaaccgcattggtttggtttggtt 6057  T

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Target: scaffold0470 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 6309 - 6259
Alignment:
Q  48 gtttggtttggttcagattctatttttaaagtcaaccgaatcaaaccaaac 98  Q
    |||||||||||||   ||| |||||| ||||||||||||||||||||||||    
T  6309 gtttggtttggttagaattttattttaaaagtcaaccgaatcaaaccaaac 6259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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