View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16259_high_10 (Length: 268)
Name: NF16259_high_10
Description: NF16259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16259_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 52435251 - 52435480
Alignment:
| Q |
22 |
tagtttgtcataaaaataaacattgaatgacacatttagttttttcccccttggatagtttcaaaaagagtaataaacagatataataaataatattgga |
121 |
Q |
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| T |
52435251 |
tagtttgtcataaaaataaacattgaatgacacatttagtatttttccccttggatagtttcaaaaagagtaataaacagatataataaataatattgga |
52435350 |
T |
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| Q |
122 |
gattttatgtattatttattactatgtatagacagtggttacaagacgcaacagcctgagtggagttgcttacaaagacgaccctacaataatgtcttgg |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
52435351 |
gattttatgtattatttattactatgtatagacagtggttacaagacgcaacagcctgagtggagttgcttacaaagacgaccctacaataatggcttgg |
52435450 |
T |
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| Q |
222 |
gagcttatgaatgagattagatgcccttca |
251 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
52435451 |
gagcttatgaatgagattagatgcccttca |
52435480 |
T |
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