View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16259_high_12 (Length: 249)
Name: NF16259_high_12
Description: NF16259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16259_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 231
Target Start/End: Original strand, 8909710 - 8909926
Alignment:
| Q |
15 |
tcatcttctttatgatcattttggtgaattgttccatatggtactgcatatatatacaactagtattttaaggtcacttatgcttttttgagaagaaatt |
114 |
Q |
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| T |
8909710 |
tcatcttctttatgatcattttggtgaattgttccatatggtactgcatatatatacaactagtattttaaggtcacttatgcttttttgagaagaaatt |
8909809 |
T |
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| Q |
115 |
atgaaacagatatgtgatcatgagttagggaaaccaccatgaaaggttgattatctgatctgaatataatgttgggaatttctcttagccatattggtaa |
214 |
Q |
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| T |
8909810 |
ataaaacagatatgtgatcatgagttagggaaaccaccatgaaaggttgattatctgatctgaatataatgttgggaatttctcttagccatattggtaa |
8909909 |
T |
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| Q |
215 |
ttctctgaaaagtaacc |
231 |
Q |
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| T |
8909910 |
ttctctgaaaagtaacc |
8909926 |
T |
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