View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16259_high_5 (Length: 482)
Name: NF16259_high_5
Description: NF16259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16259_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 433; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 19 - 463
Target Start/End: Complemental strand, 21400523 - 21400079
Alignment:
| Q |
19 |
cttgatagtggggaaacatatcacatatgtttttacatggatgtgtttcatttcttataaaagaattaaaggaacacaagttaagttgtctaatggtaat |
118 |
Q |
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| T |
21400523 |
cttgatagtggggaaacatatcacatatgtttttacatggatgtgtttcatttcttataaaagaattaaaggaacacaagttaagttgtctaatggtaat |
21400424 |
T |
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| Q |
119 |
tatgcaatggcagaaatggttggaattgtgcatatcattagctccatagttctacatgatgtgttatacttgccagtttcttaatgtcaatttgatattc |
218 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
21400423 |
tatgcaatagcagaaatggttggaattgtgcatatcattagctccatagttctacatgatgtgttatacttgccagtttcttattgtcaatttgatattc |
21400324 |
T |
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| Q |
219 |
atagacaaggtagcaaaggaattgtcttgttctctgatgcaagttgtttgatacagatcaccaatgacttgaagatgattggtttgggtagattacacaa |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
21400323 |
atagacaaggtagcaaaggaattgtcttgttctctgatgcaagttgtttgatacagatcaccaaggacttgaagatgattggtttgggtagattacacaa |
21400224 |
T |
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| Q |
319 |
tgtgctttactacttggaagatagtagagatgtaaataaccatgctgctccatgtacaactaaaaatggagttctaaataagcctgctactatatgcata |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21400223 |
tgtgctttactacttggaagatagtagagatgtaaataaccatgctgctccatgtacaactaaaaatggagttctaaataagcctgctactatatgcata |
21400124 |
T |
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| Q |
419 |
actagttgtaatctgctttctattcctgattctgctctatgccac |
463 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21400123 |
actagttgtaatctgctttctattcctgattctgctctatgccac |
21400079 |
T |
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