View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16259_low_9 (Length: 333)
Name: NF16259_low_9
Description: NF16259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16259_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 35919095 - 35919419
Alignment:
| Q |
1 |
ttaaatatatggttttttaattaattattgttttgtaggatttggtggacgctatatacaatctatctgaagcattacctcgtcgatctgttatcataaa |
100 |
Q |
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| T |
35919095 |
ttaaatatatggttttttaattaattattgttttgtaggatttggtggacgctatatacaatctatctgaagcattacctcgtcgatctgttatcataaa |
35919194 |
T |
|
| Q |
101 |
ttcggcaacaggttctgtatcagaggttggcctttttgatccaaatggtcctcctaacaagcgccaggtaattaaaggtccaaaatctgataaaactttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35919195 |
ttcggcaacaggttctgtatcagaggttggcctttttgatccaaatggtcctcctaacaagcgccaggtaattaaaggtccaaaatctgataaaactttg |
35919294 |
T |
|
| Q |
201 |
catcatatcgcaatctgtaaagcaattaatttttctcttatatcttataatttgtgcgcgtgtttgcttgcaggtaaaatttcagataattactttagct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35919295 |
catcatatcgcaatctgtaaagcaattaatttttctcttatatcttataatttgtgcgcgtgtttgcttgcaggtaaaatttcagataattactttagct |
35919394 |
T |
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| Q |
301 |
gtaaactgtctcgttgatgatgatg |
325 |
Q |
| |
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|||| |||||||||||||||||||| |
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| T |
35919395 |
gtaatctgtctcgttgatgatgatg |
35919419 |
T |
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