View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16260_high_1 (Length: 684)

Name: NF16260_high_1
Description: NF16260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16260_high_1
NF16260_high_1
[»] chr1 (13 HSPs)
chr1 (250-484)||(10408410-10408643)
chr1 (115-226)||(10408725-10408836)
chr1 (545-623)||(10408289-10408367)
chr1 (545-623)||(10391547-10391625)
chr1 (545-609)||(10403070-10403134)
chr1 (18-116)||(38864286-38864383)
chr1 (18-115)||(37286269-37286366)
chr1 (440-484)||(51168994-51169038)
chr1 (70-112)||(26724494-26724536)
chr1 (70-112)||(26732611-26732653)
chr1 (639-676)||(10408236-10408273)
chr1 (18-55)||(26724194-26724231)
chr1 (18-55)||(26732311-26732348)
[»] chr4 (5 HSPs)
chr4 (18-115)||(33747412-33747509)
chr4 (431-484)||(9580085-9580138)
chr4 (431-484)||(9585780-9585833)
chr4 (437-484)||(9366669-9366716)
chr4 (18-55)||(42057154-42057191)
[»] chr8 (4 HSPs)
chr8 (18-114)||(31664088-31664184)
chr8 (18-115)||(27561857-27561955)
chr8 (18-111)||(42146869-42146962)
chr8 (70-114)||(35177206-35177250)
[»] chr2 (2 HSPs)
chr2 (18-115)||(6999657-6999755)
chr2 (18-109)||(42482052-42482144)
[»] chr5 (6 HSPs)
chr5 (18-114)||(14135592-14135689)
chr5 (67-115)||(40322770-40322818)
chr5 (18-115)||(27513404-27513502)
chr5 (18-115)||(38694211-38694307)
chr5 (18-114)||(1462803-1462899)
chr5 (70-112)||(1298201-1298243)
[»] chr6 (2 HSPs)
chr6 (18-115)||(18059211-18059309)
chr6 (18-55)||(30452039-30452076)
[»] chr7 (3 HSPs)
chr7 (70-115)||(19124580-19124625)
chr7 (18-112)||(27922459-27922554)
chr7 (434-484)||(29902739-29902789)
[»] scaffold0060 (1 HSPs)
scaffold0060 (71-114)||(61393-61436)


Alignment Details
Target: chr1 (Bit Score: 171; Significance: 2e-91; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 250 - 484
Target Start/End: Complemental strand, 10408643 - 10408410
Alignment:
Q  250 tatatcgtgaagcaaaagtaagaaaatcgagtctatcataatatgcagnnnnnnnnnngttatccattcatatatcataattaagcattaaattgatttt 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||          | ||||||||||||||||||||||||||||||||||||||||    
T  10408643 tatatcgtgaagcaaaagtaagaaaatcgagtctatcataatatgcagttttttt---gctatccattcatatatcataattaagcattaaattgatttt 10408547  T
Q  350 gtggtggatagttaataaatttgagataatagtttttt--agagggtggcaagattttaatagagaatgaggagtttctatagatatgccacatagacac 447  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10408546 gtggtggatagttaataaatttgagataatagttttttagagagggtggcaagattttaatagagaatgaggagtttctatagatatgccacatagacac 10408447  T
Q  448 aatccaagcattagaatgaagaaagtttataattcaa 484  Q
    ||||||||||||| ||||| | |||||| ||||||||    
T  10408446 aatccaagcattaaaatgatgcaagtttctaattcaa 10408410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 10408836 - 10408725
Alignment:
Q  115 ttaatccaatggccacatctatctaaatctgtatatttttgtatacaaagcgttaattttctcatcaaagaaggcaaagagtttgtttaacgtacaatac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| || |||||    
T  10408836 ttaatccaatggccacatctatctaaatctgtatatttttgtatacaaagcgttacttttctcatcaaagaaggcaaagaatttgtttaacatataatac 10408737  T
Q  215 atattgctaaaa 226  Q
    ||||||||||||    
T  10408736 atattgctaaaa 10408725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 545 - 623
Target Start/End: Complemental strand, 10408367 - 10408289
Alignment:
Q  545 acacaagacatgcaactgttatcagcataactgaattcatcaccttgaaagcttttagggttgatatacacccgcaccc 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10408367 acacaagacatgcaactgttatcagcataactgaattcatcaccttgaaagcttttagggttgatatacaccctcaccc 10408289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 545 - 623
Target Start/End: Complemental strand, 10391625 - 10391547
Alignment:
Q  545 acacaagacatgcaactgttatcagcataactgaattcatcaccttgaaagcttttagggttgatatacacccgcaccc 623  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  10391625 acacatgacatgcaactgttatcagcataactgaattcatcaccttgaaagctcttagggttgatatacacccccaccc 10391547  T

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Target: chr1; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 545 - 609
Target Start/End: Complemental strand, 10403134 - 10403070
Alignment:
Q  545 acacaagacatgcaactgttatcagcataactgaattcatcaccttgaaagcttttagggttgat 609  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  10403134 acacaagacatgcaactgttatcagaatgactgaattcatcaccttgaaagctattagggttgat 10403070  T

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Target: chr1; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 38864286 - 38864383
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnnttagtccatcttagaccaaaacttcataggtccaagttaaatggcacctt 116  Q
    |||||||||||| || || ||||||||||||||||||| ||        || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  38864286 ggaccatgataagaattgattgttgattcaatctaaaggttaaaaaaa-ttggtccatcttagaccaaaacttcatgggtccaagttaaatggcacctt 38864383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 37286269 - 37286366
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnnttagtccatcttagaccaaaacttcataggtccaagttaaatggcacct 115  Q
    |||||||||||| || |||||||||||||||||||||| ||        || ||||||||||||| |||| ||||| |||||||  ||||||||||||    
T  37286269 ggaccatgataagaattggttgttgattcaatctaaaggttaaaaaaaattggtccatcttagactaaaatttcatgggtccaaactaaatggcacct 37286366  T

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Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 484
Target Start/End: Original strand, 51168994 - 51169038
Alignment:
Q  440 atagacacaatccaagcattagaatgaagaaagtttataattcaa 484  Q
    |||| |||||||||||||||||||||||| |||||| ||||||||    
T  51168994 ataggcacaatccaagcattagaatgaagcaagtttctaattcaa 51169038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 26724536 - 26724494
Alignment:
Q  70 gtccatcttagaccaaaacttcataggtccaagttaaatggca 112  Q
    ||||||||||||||||| |||||| |||||||| |||||||||    
T  26724536 gtccatcttagaccaaagcttcatgggtccaagctaaatggca 26724494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 26732653 - 26732611
Alignment:
Q  70 gtccatcttagaccaaaacttcataggtccaagttaaatggca 112  Q
    ||||||||||||||||| |||||| |||||||| |||||||||    
T  26732653 gtccatcttagaccaaagcttcatgggtccaagctaaatggca 26732611  T

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Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 639 - 676
Target Start/End: Complemental strand, 10408273 - 10408236
Alignment:
Q  639 ctcccatcatcaaggaagtgatctggttcatctcactc 676  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  10408273 ctcctatcatcaaggaagtgatctggttcatcccactc 10408236  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 26724194 - 26724231
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaag 55  Q
    |||||||||||| || ||||||||||||||||||||||    
T  26724194 ggaccatgataagaattggttgttgattcaatctaaag 26724231  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 26732311 - 26732348
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaag 55  Q
    |||||||||||| || ||||||||||||||||||||||    
T  26732311 ggaccatgataagaattggttgttgattcaatctaaag 26732348  T

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Target: chr4 (Bit Score: 50; Significance: 3e-19; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 33747509 - 33747412
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnnttagtccatcttagaccaaaacttcataggtccaagttaaatggcacct 115  Q
    |||||||||||| || |||||||||||||||||||||| ||        || |||||||||||||||||||||||| |||||||| ||||||||||||    
T  33747509 ggaccatgataataattggttgttgattcaatctaaaggttaaaaaaaattggtccatcttagaccaaaacttcatgggtccaagctaaatggcacct 33747412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 484
Target Start/End: Complemental strand, 9580138 - 9580085
Alignment:
Q  431 atatgccacatagacacaatccaagcattagaatgaagaaagtttataattcaa 484  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||  |||||||    
T  9580138 atatgtcacataggcacaatccaagcattagaatgaagcaagtttcaaattcaa 9580085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 484
Target Start/End: Complemental strand, 9585833 - 9585780
Alignment:
Q  431 atatgccacatagacacaatccaagcattagaatgaagaaagtttataattcaa 484  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||  |||||||    
T  9585833 atatgtcacataggcacaatccaagcattagaatgaagcaagtttcaaattcaa 9585780  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 484
Target Start/End: Complemental strand, 9366716 - 9366669
Alignment:
Q  437 cacatagacacaatccaagcattagaatgaagaaagtttataattcaa 484  Q
    ||||||| |||||||||||||||||||||||  |||||| ||||||||    
T  9366716 cacataggcacaatccaagcattagaatgaaacaagtttctaattcaa 9366669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 42057191 - 42057154
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaag 55  Q
    |||||||||||| || ||||||||||||||||||||||    
T  42057191 ggaccatgataagaattggttgttgattcaatctaaag 42057154  T

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Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 31664184 - 31664088
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnnttagtccatcttagaccaaaacttcataggtccaagttaaatggcacc 114  Q
    |||||||||||| || |||||||||||||||||||||| ||        || |||||||||||||||||||||||| ||| |||| |||||||||||    
T  31664184 ggaccatgataagaattggttgttgattcaatctaaaggttaaaaaaaattggtccatcttagaccaaaacttcatgggttcaagctaaatggcacc 31664088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 27561955 - 27561857
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnn-ttagtccatcttagaccaaaacttcataggtccaagttaaatggcacct 115  Q
    |||||||||||||||  ||||||||||||||||||||| ||         || |||||||||||||||||||||||| |||||||| |||||| |||||    
T  27561955 ggaccatgataaaaatgggttgttgattcaatctaaaggtttaaaaaaaattggtccatcttagaccaaaacttcatgggtccaagctaaatgacacct 27561857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 42146869 - 42146962
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnnttagtccatcttagaccaaaacttcataggtccaagttaaatggc 111  Q
    |||||||||||| || |||||||||||||||||||||| ||        || |||||||||||||||||||||| | | |||||| ||||||||    
T  42146869 ggaccatgataagaattggttgttgattcaatctaaaggttaaaaaaaattggtccatcttagaccaaaacttcttggatccaagctaaatggc 42146962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 35177206 - 35177250
Alignment:
Q  70 gtccatcttagaccaaaacttcataggtccaagttaaatggcacc 114  Q
    |||||||||| ||||||||||||| |||| ||| |||||||||||    
T  35177206 gtccatcttaaaccaaaacttcatgggtctaagctaaatggcacc 35177250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 6999755 - 6999657
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnnt-tagtccatcttagaccaaaacttcataggtccaagttaaatggcacct 115  Q
    |||||||||||| || |||||||||||||||||||||| ||          | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  6999755 ggaccatgataagaattggttgttgattcaatctaaaggttaaaaaaaaaatggtccatcttagaccaaaacttcataggtccaagctaaatggcacct 6999657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 42482052 - 42482144
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagatt-nnnnnnnnttagtccatcttagaccaaaacttcataggtccaagttaaatg 109  Q
    |||||||||||| || |||||||||||||||||||||| ||         || |||||||||||||||||||||||| |||| ||| ||||||    
T  42482052 ggaccatgataagaattggttgttgattcaatctaaaggttaaaaaaaaattggtccatcttagaccaaaacttcatgggtcaaagctaaatg 42482144  T

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Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 14135689 - 14135592
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnn-ttagtccatcttagaccaaaacttcataggtccaagttaaatggcacc 114  Q
    |||||||||||| || |||||||||||||||||||||| ||         || |||||||||||||||||||||||| |||||||| |||||||||||    
T  14135689 ggaccatgataagaattggttgttgattcaatctaaaggttaaaaaaaaattggtccatcttagaccaaaacttcatgggtccaagctaaatggcacc 14135592  T

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Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 40322818 - 40322770
Alignment:
Q  67 ttagtccatcttagaccaaaacttcataggtccaagttaaatggcacct 115  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  40322818 ttagtccatcttagaccaaaacttcatggatccaagttaaatggcacct 40322770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 27513502 - 27513404
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnn-ttagtccatcttagaccaaaacttcataggtccaagttaaatggcacct 115  Q
    |||||||||||| || |||||||||||||||||||||| ||         || ||||||||||||| |||||||||| |||||||| ||||||||||||    
T  27513502 ggaccatgataagaattggttgttgattcaatctaaaggttaaaataaaattggtccatcttagacaaaaacttcatgggtccaagctaaatggcacct 27513404  T

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Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 38694307 - 38694211
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnnttagtccatcttagaccaaaacttcataggtccaagttaaatggcacct 115  Q
    ||||||||||||||| || |||||| |||||||||||| ||        || |||||||||| ||||||||||||||| |||||| ||||||||||||    
T  38694307 ggaccatgataaaaattgattgttgtttcaatctaaaggttaaaaaaa-ttggtccatcttaaaccaaaacttcatagatccaagctaaatggcacct 38694211  T

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Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 1462899 - 1462803
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnnttagtccatcttagaccaaaacttcataggtccaagttaaatggcacc 114  Q
    |||||||||||| || |||||||||||||||||||||| ||        ||  || ||||||||  |||||||||| |||||||| |||||||||||    
T  1462899 ggaccatgataagaattggttgttgattcaatctaaaggttaaaaaaaattgatctatcttagattaaaacttcatgggtccaagctaaatggcacc 1462803  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 1298201 - 1298243
Alignment:
Q  70 gtccatcttagaccaaaacttcataggtccaagttaaatggca 112  Q
    |||||||||||||||||||||||| |||||||  |||||||||    
T  1298201 gtccatcttagaccaaaacttcatgggtccaaactaaatggca 1298243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 18059211 - 18059309
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnnttag-tccatcttagaccaaaacttcataggtccaagttaaatggcacct 115  Q
    |||||||||||| || |||||||||||||||||||||| ||         | | ||||||||||||||||||||||| |||||||| ||||||||||||    
T  18059211 ggaccatgataagaattggttgttgattcaatctaaaggttaaaaaaaaattgatccatcttagaccaaaacttcatgggtccaagctaaatggcacct 18059309  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 30452076 - 30452039
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaag 55  Q
    |||||||||||| || ||||||||||||||||||||||    
T  30452076 ggaccatgataagaattggttgttgattcaatctaaag 30452039  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000004; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 19124580 - 19124625
Alignment:
Q  70 gtccatcttagaccaaaacttcataggtccaagttaaatggcacct 115  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  19124580 gtccatcttagaccaaaacttcatgggtccaagctaaatggcacct 19124625  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 27922554 - 27922459
Alignment:
Q  18 ggaccatgataaaaaatggttgttgattcaatctaaagattnnnnnnnn-ttagtccatcttagaccaaaacttcataggtccaagttaaatggca 112  Q
    |||||||||||| || |||||||||||||||||||||| ||         || ||||||||||||||||||||||||  ||||||| |||||||||    
T  27922554 ggaccatgataagaattggttgttgattcaatctaaaggttaaaaaaaaattggtccatcttagaccaaaacttcatgagtccaagctaaatggca 27922459  T

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Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 434 - 484
Target Start/End: Complemental strand, 29902789 - 29902739
Alignment:
Q  434 tgccacatagacacaatccaagcattagaatgaagaaagtttataattcaa 484  Q
    |||||||||| |||||||||| ||||||||||||| ||||||  |||||||    
T  29902789 tgccacataggcacaatccaaacattagaatgaagcaagtttcaaattcaa 29902739  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 61393 - 61436
Alignment:
Q  71 tccatcttagaccaaaacttcataggtccaagttaaatggcacc 114  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||    
T  61393 tccatcttagaccaaaatttcatgggtccaagctaaatggcacc 61436  T

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