View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16260_high_8 (Length: 297)
Name: NF16260_high_8
Description: NF16260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16260_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 20 - 281
Target Start/End: Original strand, 28701522 - 28701783
Alignment:
| Q |
20 |
accaaaatctaaaaaactacagagaaattacaaggcacggcataagatcttttgaatggattaagaatttgacgaaaaagagtggaacagtagctaacgt |
119 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28701522 |
accaaaatctaaaaaactacagagaaattacatggcacggcataagatcttttgaatggattaagaatttgacgaaaaagagtggaacagtagctaacgt |
28701621 |
T |
|
| Q |
120 |
aaattcaagaggacgatcctgcccagtagtaaatttagttcaagactctgactctaacaatgaaggtaagacaaggagtaatagtgatcccaaacatgca |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
28701622 |
aaattcaagaggacgatcctgcccagtagtaaatttagttcaagactctgactctaacaatgaaggtaagacaaggagtactagtgatcccaaacatgca |
28701721 |
T |
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| Q |
220 |
atgtatgtcaaaaagagatataattgtacactcgagacctaatttgcatcttatcaacaaga |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
28701722 |
atgtatgtcaaaaagagatataattgtacactcgagacctaatttgcatcttattaacaaga |
28701783 |
T |
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