View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16261_low_1 (Length: 406)
Name: NF16261_low_1
Description: NF16261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16261_low_1 |
 | |
|
| [»] scaffold0549 (1 HSPs) |
| | |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 26)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 30732000 - 30732237
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
30732000 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctaatatgtggaccaatggttcacacgat |
30732099 |
T |
|
| Q |
260 |
attaaattacttttttga-ggggggaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgca |
358 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30732100 |
attaaattacttttttgagggggggaggccactttggtagcttgctactaggcttctcgtgtgttgtcaatgtgttgcactatagcattggtctggtgca |
30732199 |
T |
|
| Q |
359 |
ccccaccaattcaagtttaaatttttattctggttcat |
396 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30732200 |
ccccaccaattcaagtttaaatttttattctggttcat |
30732237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 164 - 384
Target Start/End: Original strand, 30733984 - 30734205
Alignment:
| Q |
164 |
taactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatatta |
263 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30733984 |
taacttatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacatgatatta |
30734083 |
T |
|
| Q |
264 |
aattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcacccc |
362 |
Q |
| |
|
|||||||||||| |||||| || |||| || |||||||||||||||||||||| | |||||| || || |||||||||| ||||||| ||||||||||| |
|
|
| T |
30734084 |
aattactttttttagggggagaagccattttagtagcttgctactaggcttctcgagtgtcgccagtgcgttgcactattgcattggcttggcgcacccc |
30734183 |
T |
|
| Q |
363 |
accaattcaagtttaaattttt |
384 |
Q |
| |
|
|||||| |||||| |||||||| |
|
|
| T |
30734184 |
accaatccaagttcaaattttt |
30734205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 165 - 368
Target Start/End: Original strand, 32918077 - 32918281
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaa |
264 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32918077 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggtccacacgatattaa |
32918176 |
T |
|
| Q |
265 |
attacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcacccca |
363 |
Q |
| |
|
|||||||||||||||||| || |||| | |||||||||||||| |||||| ||||||| |||| |||||||||||||||| || ||||||||| || |
|
|
| T |
32918177 |
attacttttttgagggggagaagccattgcagtagcttgctactctgcttctcttgtgtcgctaatgcgttgcactatagcattagtttggcgcacctca |
32918276 |
T |
|
| Q |
364 |
ccaat |
368 |
Q |
| |
|
||||| |
|
|
| T |
32918277 |
ccaat |
32918281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 165 - 368
Target Start/End: Original strand, 43850046 - 43850250
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaa |
264 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
43850046 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggcccaatgagtcacatgatattaa |
43850145 |
T |
|
| Q |
265 |
attacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcacccca |
363 |
Q |
| |
|
|| ||||||||||||||| |||| ||||| | |||||||||| | | ||||| ||||||| | ||| |||||||||| |||| || |||||||||| | |
|
|
| T |
43850146 |
atcacttttttgagggggagaggtcacttcaatagcttgctattggacttctaatgtgtcgcctatgcgttgcactattgcataggcttggcgcacccaa |
43850245 |
T |
|
| Q |
364 |
ccaat |
368 |
Q |
| |
|
||||| |
|
|
| T |
43850246 |
ccaat |
43850250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 2841125 - 2841010
Alignment:
| Q |
167 |
ctcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaat |
266 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
2841125 |
ctcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggttcaatggatcacacgatattaaat |
2841026 |
T |
|
| Q |
267 |
tacttttttgaggggg |
282 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
2841025 |
tacttttttgaggggg |
2841010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 168 - 385
Target Start/End: Original strand, 9020847 - 9021065
Alignment:
| Q |
168 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcac-acgatattaaat |
266 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||| |||| || |||||||| |
|
|
| T |
9020847 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcaatttaatatctgagatgtggcccaatgggtcactacagtattaaat |
9020946 |
T |
|
| Q |
267 |
tacttttttgaggg-gggaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcaccccacc |
365 |
Q |
| |
|
|||||||||||||| | ||||||| || | || ||||||| | ||||||| ||||| | |||||||||||||| |||| ||| ||| |||||||||| |
|
|
| T |
9020947 |
tacttttttgagggtgagaggccatttcaataacttgctattgggcttctcaagtgtcacctatgtgttgcactattgcataggt-tggtgcaccccacc |
9021045 |
T |
|
| Q |
366 |
aattcaagtttaaattttta |
385 |
Q |
| |
|
|||||||||| ||||||||| |
|
|
| T |
9021046 |
aattcaagttcaaattttta |
9021065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 160 - 384
Target Start/End: Original strand, 9026778 - 9027003
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcac-acga |
258 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||| || |
|
|
| T |
9026778 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgattagtggcccaatgggtcacaacag |
9026877 |
T |
|
| Q |
259 |
tattaaattacttttttgag-gggggaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgc |
357 |
Q |
| |
|
|||||||||||||||||||| ||| ||| ||| || | |||||||||| | || |||| |||||| | ||| ||||||||| ||||||| ||||| | |
|
|
| T |
9026878 |
tattaaattacttttttgagtgggagagaccatttcaatagcttgctattgggtttctcaagtgtcgcctatgctttgcactattgcattgg-ctggcac |
9026976 |
T |
|
| Q |
358 |
accccaccaattcaagtttaaattttt |
384 |
Q |
| |
|
||||| |||||||||||| |||||||| |
|
|
| T |
9026977 |
acccctccaattcaagttcaaattttt |
9027003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 160 - 385
Target Start/End: Original strand, 8973304 - 8973530
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcac-acga |
258 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||| || | |
|
|
| T |
8973304 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaatatctgattagtggcccaatgggtcacaacaa |
8973403 |
T |
|
| Q |
259 |
tattaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgc |
357 |
Q |
| |
|
||||||||||||||||| |||||| ||| ||| || | ||||||||| | || |||| |||| | ||| |||||||||| ||| || ||||||| |
|
|
| T |
8973404 |
tattaaattacttttttaagggggagagaccatttcaatagcttgctgttgggtttctcaagtgttgcatatgcgttgcactattgca-tgagctggcgc |
8973502 |
T |
|
| Q |
358 |
accccaccaattcaagtttaaattttta |
385 |
Q |
| |
|
||||||||||||||||| ||||||||| |
|
|
| T |
8973503 |
gccccaccaattcaagttcaaattttta |
8973530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 165 - 384
Target Start/End: Original strand, 9008018 - 9008238
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttca-cacgatatta |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||| || ||||| |
|
|
| T |
9008018 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgattagtggcccaatgggtcataacagtatta |
9008117 |
T |
|
| Q |
264 |
aattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcacccc |
362 |
Q |
| |
|
||||||||||||||||||| ||||||| || | || |||| || | || |||| |||||| | ||| ||||||||| ||||| | ||||| |||||| |
|
|
| T |
9008118 |
aattacttttttgagggggagaggccatttcaataacttgttattgggtttctcaagtgtcgcctatgctttgcactattgcattcg-ctggcacacccc |
9008216 |
T |
|
| Q |
363 |
accaattcaagtttaaattttt |
384 |
Q |
| |
|
|||||||| |||| || ||||| |
|
|
| T |
9008217 |
accaattctagttcaatttttt |
9008238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 170 - 315
Target Start/End: Complemental strand, 19232504 - 19232359
Alignment:
| Q |
170 |
atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattac |
269 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||| ||| ||| |||||| |||||||||||| |
|
|
| T |
19232504 |
atacctttctcggccttttggctaagatcaagtgtaatatctgttcttatcagtttaata-ctgatatgtgacccattgggtcacacaatattaaattac |
19232406 |
T |
|
| Q |
270 |
ttttttgaggggg-gaggccacttaagtagcttgctactaggcttct |
315 |
Q |
| |
|
|||||||||||| || ||||||| | |||||||||| | ||||||| |
|
|
| T |
19232405 |
ctttttgagggggagaagccacttcaatagcttgctattgggcttct |
19232359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 9032045 - 9032126
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtgg |
241 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
9032045 |
ctttcaactcatacctttctcggccttttggttaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgg |
9032126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 175 - 275
Target Start/End: Complemental strand, 10763978 - 10763878
Alignment:
| Q |
175 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttt |
274 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| || || ||||||||||||||||| |
|
|
| T |
10763978 |
tttctcggtcttttgactaagatcaagtgtagtatatgttcttatcagtttaatatctgatatgtggatcaatggtccatacaatattaaattacttttt |
10763879 |
T |
|
| Q |
275 |
t |
275 |
Q |
| |
|
| |
|
|
| T |
10763878 |
t |
10763878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 9023437 - 9023528
Alignment:
| Q |
158 |
aacttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatgg |
249 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
9023437 |
aactttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaatatctgattagtggcccaatgg |
9023528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 9030390 - 9030512
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||| | |||| |||||| |||||| | |
|
|
| T |
9030390 |
ctttcaactcatatttttcttggccttttggctaagatcaagtgtagtatctgttcttatcaatttaatatttgagaagtggctcaatgggtcacacagt |
9030489 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg |
282 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
9030490 |
attaaattacttttttgaggggg |
9030512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 8979314 - 8979389
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgat |
235 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
8979314 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatttgat |
8979389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 8992140 - 8992262
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcac-acga |
258 |
Q |
| |
|
|||||||||||| |||||||| | |||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||| ||||||| |||| | | |
|
|
| T |
8992140 |
cttttaactcatgcctttctcagtcttttggctaagatcaagtgtagtatatgttcttatgagttcaatatctgattagtggcccaatgggtcacaataa |
8992239 |
T |
|
| Q |
259 |
tattaaattacttttttgagggg |
281 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
8992240 |
tattaaattacttttttgagggg |
8992262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 9016485 - 9016611
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatc---ggtttaatatctgatatgtggaccaatggttcac-a |
255 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||| ||||||| |||| | |
|
|
| T |
9016485 |
cttttaactcataccttattcgaccttttggctaagatcaaatgtagtatctgttcttatcagtagtttaatatctgattagtggcccaatgggtcacaa |
9016584 |
T |
|
| Q |
256 |
cgatattaaattacttttttgaggggg |
282 |
Q |
| |
|
| |||||||||||||||||||||||| |
|
|
| T |
9016585 |
cagtattaaattacttttttgaggggg |
9016611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 8984690 - 8984760
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgat |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||| |
|
|
| T |
8984690 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttattagtttaatatttgat |
8984760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 160 - 280
Target Start/End: Original strand, 8988447 - 8988568
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcac-acga |
258 |
Q |
| |
|
|||| |||| ||||| |||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||| |||| ||| ||||||||| | || | |
|
|
| T |
8988447 |
ctttcaacttataccattcttggccttttggcgaagatcaagtgtagtatttgttcttatcagtttaatatttgatcagtgactcaatggttctcaacaa |
8988546 |
T |
|
| Q |
259 |
tattaaattacttttttgaggg |
280 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
8988547 |
tattaaattacttttttgaggg |
8988568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 6471813 - 6471709
Alignment:
| Q |
170 |
atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattac |
269 |
Q |
| |
|
|||||||| ||| ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| || | ||||| ||||| |||||||| |||| |
|
|
| T |
6471813 |
atacctttttcgaccttttggctaagat-aagtgtagtatatgttcttattagtttaatatctgatatacggtctaatggatcacatgatattaagttac |
6471715 |
T |
|
| Q |
270 |
tttttt |
275 |
Q |
| |
|
|||||| |
|
|
| T |
6471714 |
tttttt |
6471709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 196 - 279
Target Start/End: Complemental strand, 17225743 - 17225659
Alignment:
| Q |
196 |
atcaagtgtagtatctgttctt-atcggtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttttgagg |
279 |
Q |
| |
|
||||||||||||||||||| || |||||||||||| ||||||| ||| |||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
17225743 |
atcaagtgtagtatctgttttttatcggtttaataactgatatctggtccaatgaatcatacgatattaaattacttttttgagg |
17225659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 35701893 - 35702003
Alignment:
| Q |
172 |
acctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattactt |
271 |
Q |
| |
|
||||||||| | |||||||||||||||||||| |||| |||| |||| ||||||||| |||||||||| |||| ||||||||||||| |||||| |
|
|
| T |
35701893 |
acctttctcaactttttggctaagatcaagtgtggtatttgtttttattagtttaatatttgatatgtgggccaacaagtcacacgatattagtttactt |
35701992 |
T |
|
| Q |
272 |
ttttgaggggg |
282 |
Q |
| |
|
||||||||||| |
|
|
| T |
35701993 |
ttttgaggggg |
35702003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 17275862 - 17275945
Alignment:
| Q |
199 |
aagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttttgaggggg |
282 |
Q |
| |
|
||||||||||| ||||||||| ||| ||| | | |||||||| ||||||| |||||||||||| |||||| |||||||||||| |
|
|
| T |
17275862 |
aagtgtagtatacgttcttatcagttcaatctttaatatgtggtccaatggatcacacgatattgaattacatttttgaggggg |
17275945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 8912989 - 8913074
Alignment:
| Q |
223 |
tttaatatctgatatgtggaccaatggttcacac--gatattaaattacttttttgaggggg-gaggccacttaagtagcttgcta |
305 |
Q |
| |
|
|||||||| | |||||||| |||||| |||||| |||||||||||||||||||||||||| ||| ||| || |||||||||||| |
|
|
| T |
8912989 |
tttaatatataatatgtggtccaatgaatcacacatgatattaaattacttttttgagggggagagaccatttcagtagcttgcta |
8913074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 384
Target Start/End: Original strand, 8992294 - 8992349
Alignment:
| Q |
328 |
atgtgttgcactatagcattggtctggcgcaccccaccaattcaagtttaaattttt |
384 |
Q |
| |
|
|||||||||||||| |||| || |||||||||||| |||||||||||| |||||||| |
|
|
| T |
8992294 |
atgtgttgcactattgcatggg-ctggcgcacccctccaattcaagttcaaattttt |
8992349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 39814115 - 39814150
Alignment:
| Q |
171 |
tacctttctcggccttttggctaagatcaagtgtag |
206 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |
|
|
| T |
39814115 |
tacctttctcggccttttggctatgatcaagtgtag |
39814150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 14669824 - 14669587
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14669824 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgat |
14669725 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgca |
358 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
14669724 |
attaaattacttttttgagggggagaggcaactttagtagcttgctactaatcctcttgtgtgtcgccaatgtgttgcactatagcattggtctggtgca |
14669625 |
T |
|
| Q |
359 |
ccccaccaattcaagtttaaatttttattctggttcat |
396 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14669624 |
ccccaccaattcaagtttaaatttttattctggttcat |
14669587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 14706080 - 14706317
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14706080 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgat |
14706179 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgca |
358 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| ||||||||||||||| | |||||||||| | | ||||||||||||||| ||||||||||||||| |
|
|
| T |
14706180 |
attaaattacttttttgagggggagaggcaactttagtagcttgctactaatcctcttgtgtgttgactatgtgttgcactataacattggtctggcgca |
14706279 |
T |
|
| Q |
359 |
ccccaccaattcaagtttaaatttttattctggttcat |
396 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14706280 |
ccccaccaattcaagtttaaatttttattctggttcat |
14706317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 160 - 375
Target Start/End: Original strand, 14708570 - 14708786
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14708570 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgat |
14708669 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgca |
358 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||| |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
14708670 |
attaaattacttttttgagggggagaggtcactttagtagcttgctattaggcttctcttgtgtcgtcaatgtgttgcactacagcattggcctggcgca |
14708769 |
T |
|
| Q |
359 |
ccccaccaattcaagtt |
375 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
14708770 |
ccccaccaattcaagtt |
14708786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 160 - 393
Target Start/End: Complemental strand, 14654455 - 14654222
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14654455 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgat |
14654356 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgca |
358 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||||||||||||| || | ||| |||||||| |||| ||||||||||||||||||| |||| || |
|
|
| T |
14654355 |
attaaattacttttttgagggggagaggccacttcagtagcttgctacgagtcctctcgtgtgtcgccaatatgttgcactatagcattggcttggctca |
14654256 |
T |
|
| Q |
359 |
ccccaccaattcaagtttaaatttttattctggtt |
393 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14654255 |
ccccaccaattcaag-ttaaatttttattctggtt |
14654222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 160 - 393
Target Start/End: Complemental strand, 14664246 - 14664013
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14664246 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgat |
14664147 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgca |
358 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||||||||||||| || | ||| |||||||| |||| ||||||||||||||||||| |||| || |
|
|
| T |
14664146 |
attaaattacttttttgagggggagaggccacttcagtagcttgctacgagtcctctcgtgtgtcgccaatatgttgcactatagcattggcttggctca |
14664047 |
T |
|
| Q |
359 |
ccccaccaattcaagtttaaatttttattctggtt |
393 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14664046 |
ccccaccaattcaag-ttaaatttttattctggtt |
14664013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 165 - 396
Target Start/End: Original strand, 14683747 - 14683979
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaa |
264 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14683747 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgatattaa |
14683846 |
T |
|
| Q |
265 |
attacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcacccca |
363 |
Q |
| |
|
|||||||||||||||||| ||||| |||| |||||||||||||||| | ||| ||||||| |||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
14683847 |
attacttttttgagggggagaggcaactttagtagcttgctactagtcctctcgtgtgtcaccaatgtgttgcactatagcattggcttggtgcacccca |
14683946 |
T |
|
| Q |
364 |
ccaattcaagtttaaatttttattctggttcat |
396 |
Q |
| |
|
||||| ||| |||||||||||||||||||||| |
|
|
| T |
14683947 |
ccaatccaaagttaaatttttattctggttcat |
14683979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 160 - 376
Target Start/End: Original strand, 14716283 - 14716500
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
14716283 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctaatatgtggaccaatggttcacacgat |
14716382 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgca |
358 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| ||||||||||||||| | ||| |||||||| |||||||||||||||||||||||| ||| ||| |
|
|
| T |
14716383 |
attaaattacttttttgagggggagaggcaactttagtagcttgctactaatcctctcgtgtgtcgccaatgtgttgcactatagcattggcttggtgca |
14716482 |
T |
|
| Q |
359 |
ccccaccaattcaagttt |
376 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
14716483 |
ccccaccaattcaagttt |
14716500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 168 - 393
Target Start/End: Original strand, 14652525 - 14652752
Alignment:
| Q |
168 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
267 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
14652525 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggtccacacgatattaaatt |
14652624 |
T |
|
| Q |
268 |
acttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcaccccacca |
366 |
Q |
| |
|
||||||||||||||| || |||| || |||||||||||||||||||||| | |||| ||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
14652625 |
acttttttgagggggagaagccattttagtagcttgctactaggcttctcgagtgtttccaatgcgttgcactatagcattggcgtggcgcaccccacca |
14652724 |
T |
|
| Q |
367 |
attcaagtttaaat-ttttattctggtt |
393 |
Q |
| |
|
||||||||| |||| ||||||| ||||| |
|
|
| T |
14652725 |
attcaagttcaaatattttattttggtt |
14652752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 168 - 393
Target Start/End: Original strand, 14662316 - 14662543
Alignment:
| Q |
168 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
267 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
14662316 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggtccacacgatattaaatt |
14662415 |
T |
|
| Q |
268 |
acttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcaccccacca |
366 |
Q |
| |
|
||||||||||||||| || |||| || |||||||||||||||||||||| | |||| ||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
14662416 |
acttttttgagggggagaagccattttagtagcttgctactaggcttctcgagtgtttccaatgcgttgcactatagcattggcgtggcgcaccccacca |
14662515 |
T |
|
| Q |
367 |
attcaagtttaaat-ttttattctggtt |
393 |
Q |
| |
|
||||||||| |||| ||||||| ||||| |
|
|
| T |
14662516 |
attcaagttcaaatattttattttggtt |
14662543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 165 - 362
Target Start/End: Original strand, 14674478 - 14674676
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaa |
264 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14674478 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacatgatattaa |
14674577 |
T |
|
| Q |
265 |
attacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcacccc |
362 |
Q |
| |
|
|||||||||||||||||| || |||| || |||||||||||||||||||||| | ||||| |||||| |||||||||||||||||| |||| |||||| |
|
|
| T |
14674578 |
attacttttttgagggggagaagccattttagtagcttgctactaggcttctcgggtgtcaacaatgtattgcactatagcattggtttggcacacccc |
14674676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 165 - 362
Target Start/End: Original strand, 14681596 - 14681794
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaa |
264 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14681596 |
aacttatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgatattaa |
14681695 |
T |
|
| Q |
265 |
attacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcacccc |
362 |
Q |
| |
|
|||||||||||||||||| || |||| || |||||||||||||||||||||| | ||||| |||||| |||||||||||||||||| |||| |||||| |
|
|
| T |
14681696 |
attacttttttgagggggagaagccattttagtagcttgctactaggcttctcgggtgtcaacaatgtattgcactatagcattggtttggcacacccc |
14681794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 165 - 393
Target Start/End: Original strand, 14679856 - 14680085
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaa |
264 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14679856 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacatgatattaa |
14679955 |
T |
|
| Q |
265 |
attacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcacccca |
363 |
Q |
| |
|
|||||||||||||||||| || |||| | |||||||||||||||||||||||| |||| | ||||| ||||||||| |||||||| |||||||||| | |
|
|
| T |
14679956 |
attacttttttgagggggagaagccatattagtagcttgctactaggcttcttgagtgttgccaatgcgttgcactacagcattggcttggcgcacccga |
14680055 |
T |
|
| Q |
364 |
ccaattcaagtttaaatttttattctggtt |
393 |
Q |
| |
|
||||| ||| ||||||||| || ||||| |
|
|
| T |
14680056 |
ccaatctgagtctaaattttttttttggtt |
14680085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 165 - 384
Target Start/End: Complemental strand, 38175640 - 38175420
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaa |
264 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
38175640 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgttccaatgggtcacacgatattaa |
38175541 |
T |
|
| Q |
265 |
attacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcacccca |
363 |
Q |
| |
|
|||||||||||||||||| || |||| | ||||||||||| || || || | ||||||| |||||||||||||| ||| | ||||||||||||| |
|
|
| T |
38175540 |
attacttttttgagggggagaaaccacctcagtagcttgctgctgggtttatcatgtgtcgcttatgtgttgcactattacataagcctggcgcacccca |
38175441 |
T |
|
| Q |
364 |
ccaattcaagtttaaattttt |
384 |
Q |
| |
|
||||||| |||| || ||||| |
|
|
| T |
38175440 |
ccaattctagttcaatttttt |
38175420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 160 - 376
Target Start/End: Complemental strand, 28366314 - 28366097
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtg-gaccaatggttcacacga |
258 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
28366314 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgaccccaatgggtcacacga |
28366215 |
T |
|
| Q |
259 |
tattaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgc |
357 |
Q |
| |
|
||||||||||||||||| |||||| ||| | | | ||||||||||||||||| | | |||||||| ||| |||||||||| ||||||| ||||||| |
|
|
| T |
28366214 |
tattaaattacttttttaagggggagagactattatagtagcttgctactaggtctttcatgtgtcgtttatgcgttgcactattgcattgg-ctggcgc |
28366116 |
T |
|
| Q |
358 |
accccaccaattcaagttt |
376 |
Q |
| |
|
| |||||||||| |||||| |
|
|
| T |
28366115 |
atcccaccaattaaagttt |
28366097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 164 - 384
Target Start/End: Complemental strand, 14667222 - 14667007
Alignment:
| Q |
164 |
taactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatatta |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
14667222 |
taactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaatatctgatacgtggaccaatggttcacatgatatta |
14667123 |
T |
|
| Q |
264 |
aattacttttttgaggggg-gaggcca-cttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcaccc |
361 |
Q |
| |
|
||||||||||| |||||| || |||| || ||||| | |||||||| | |||| | || ||||||||||||||||||||| |||||||||| |
|
|
| T |
14667122 |
aattactttttctagggggagaagccatttttagtag-------caaggcttctcgagtgttgccagtgtgttgcactatagcattggcttggcgcaccc |
14667030 |
T |
|
| Q |
362 |
caccaattcaagtttaaattttt |
384 |
Q |
| |
|
||||||| |||| | |||||||| |
|
|
| T |
14667029 |
caccaatccaagctcaaattttt |
14667007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 160 - 305
Target Start/End: Original strand, 33988062 - 33988208
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
33988062 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggctcaatgagtcacacgat |
33988161 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgcta |
305 |
Q |
| |
|
|||||||||||||||| |||||| ||||||| || | |||||||||| |
|
|
| T |
33988162 |
attaaattacttttttaagggggagaggccatttcaatagcttgcta |
33988208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 14676629 - 14676727
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatatta |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14676629 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggttcacacgatatta |
14676727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 171 - 285
Target Start/End: Complemental strand, 11872585 - 11872471
Alignment:
| Q |
171 |
tacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattact |
270 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
11872585 |
tacctttctcggccttttgactaagatcaagtgtactatctgttcttatcagtttaatatatgatatgtggttcaatgggtcacacgatattaaattact |
11872486 |
T |
|
| Q |
271 |
tttttgaggggggag |
285 |
Q |
| |
|
||||| | ||||||| |
|
|
| T |
11872485 |
ttttttaagggggag |
11872471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 37422175 - 37422247
Alignment:
| Q |
174 |
ctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaa |
246 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||| |||| |
|
|
| T |
37422175 |
ctttctcggccttttggctaagatcaagtgtagcatatgttcttatcagtttaatatctgatatgtggtccaa |
37422247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 28698550 - 28698625
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtg |
240 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||| |||||||| | || ||||| |||||||| ||||||||| |
|
|
| T |
28698550 |
aactcatacatttctcggtcttttggctaagatcaaatgtagtatatatttttatcaatttaatatttgatatgtg |
28698625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 14703134 - 14703193
Alignment:
| Q |
222 |
gtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttttgagggg |
281 |
Q |
| |
|
||||||||| |||||||||||||||| || ||||||||||||||||| ||||| ||||| |
|
|
| T |
14703134 |
gtttaatatttgatatgtggaccaatagtccacacgatattaaattaaattttttagggg |
14703193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 146; Significance: 8e-77; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 164 - 376
Target Start/End: Complemental strand, 10944510 - 10944297
Alignment:
| Q |
164 |
taactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatatta |
263 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
10944510 |
taactcatacctttctcgaccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatcttatatgtggacaaatggttcacacgatatta |
10944411 |
T |
|
| Q |
264 |
aattacttttttga-ggggggaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcacccc |
362 |
Q |
| |
|
|||||||||||||| |||| || |||| || |||||||||||||||||||||||| ||||| | || ||||||||||||||||||| ||||||||||| |
|
|
| T |
10944410 |
aattacttttttgatggggagaagccattttagtagcttgctactaggcttcttgagtgtcactattgcgttgcactatagcattggtttggcgcacccc |
10944311 |
T |
|
| Q |
363 |
accaattcaagttt |
376 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
10944310 |
accaattcaagttt |
10944297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 161 - 386
Target Start/End: Original strand, 40054305 - 40054531
Alignment:
| Q |
161 |
ttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgata |
260 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| |||||| |
|
|
| T |
40054305 |
ttttaattcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggcccaatgggtcatacgata |
40054404 |
T |
|
| Q |
261 |
ttaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcac |
359 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| | |||||||||| | |||||||| |||||| |||||||||||||| |||| | |||||||| |
|
|
| T |
40054405 |
ttaaattacttttttgagggggagaggccacttcaatagcttgctattgggcttcttaagtgtcgcttatgtgttgcactattgcataagcttggcgcac |
40054504 |
T |
|
| Q |
360 |
cccaccaattcaagtttaaatttttat |
386 |
Q |
| |
|
||||||||| | |||| || ||||||| |
|
|
| T |
40054505 |
cccaccaatactagttcaattttttat |
40054531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 160 - 369
Target Start/End: Complemental strand, 41841267 - 41841058
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
41841267 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggtccaatgggtcacacgat |
41841168 |
T |
|
| Q |
260 |
attaaattacttttttga-ggggggaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgca |
358 |
Q |
| |
|
|||||||||||||||||| |||| || ||||| | |||||||||| | ||||||| | |||||| | |||||||||||||| ||| ||| |||||||| |
|
|
| T |
41841167 |
attaaattacttttttgatggggagaagccaccccaatagcttgctattgggcttctcgagtgtcgcctatgtgttgcactattgca-tgggctggcgca |
41841069 |
T |
|
| Q |
359 |
ccccaccaatt |
369 |
Q |
| |
|
||||| ||||| |
|
|
| T |
41841068 |
ccccatcaatt |
41841058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 170 - 366
Target Start/End: Original strand, 37679757 - 37679953
Alignment:
| Q |
170 |
atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattac |
269 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||| |
|
|
| T |
37679757 |
atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacttgatattaaattta |
37679856 |
T |
|
| Q |
270 |
ttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcaccccacca |
366 |
Q |
| |
|
||| ||||||||| |||||||| ||||||||||| | ||| || | ||||||| | ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
37679857 |
tttattgagggggagaggccaccacggtagcttgctattgggcctc-tctgtgtcgcctttgtgttgcactatagcaatggtctggcgcaccccacca |
37679953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 44878980 - 44879097
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaa |
264 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
44878980 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggctcaatgggtcacatgatattaa |
44879079 |
T |
|
| Q |
265 |
attacttttttgaggggg |
282 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
44879080 |
attacttttttgaggggg |
44879097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 44880941 - 44880824
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaa |
264 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
44880941 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggctcaatgggtcacatgatattaa |
44880842 |
T |
|
| Q |
265 |
attacttttttgaggggg |
282 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
44880841 |
attacttttttgaggggg |
44880824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 37682057 - 37682258
Alignment:
| Q |
168 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
267 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
37682057 |
tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccaatggtccacacgatattaaatt |
37682156 |
T |
|
| Q |
268 |
acttttttgagg-ggggaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcaccccacca |
366 |
Q |
| |
|
|||||| ||| | ||| |||| || |||||||||| |||| ||| ||||| || | |||||||||| ||||||||||||||| |||||||| |
|
|
| T |
37682157 |
tgtttttttaggatgagagtccaccaaaatagcttgctattaggtctctcaagtgtcatctttacgttgcactattgcattggtctggcgcgccccacca |
37682256 |
T |
|
| Q |
367 |
at |
368 |
Q |
| |
|
|| |
|
|
| T |
37682257 |
at |
37682258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 44582870 - 44582965
Alignment:
| Q |
185 |
ttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttttgaggg |
280 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||| | | |||||||||||||||||||||||| |
|
|
| T |
44582870 |
ttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtagctcaatggattctatgatattaaattacttttttgaggg |
44582965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 42555200 - 42555090
Alignment:
| Q |
158 |
aacttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacg |
257 |
Q |
| |
|
|||||| ||||||||||||||| | |||||||||||||||||||| || ||||||| ||||| ||||||||| |||||||||| ||||| ||||||| |
|
|
| T |
42555200 |
aactttcaactcatacctttcttgatcttttggctaagatcaagtgcagaatctgtttttatcagtttaatatttgatatgtggttcaatgaatcacacg |
42555101 |
T |
|
| Q |
258 |
atattaaatta |
268 |
Q |
| |
|
||||||||||| |
|
|
| T |
42555100 |
atattaaatta |
42555090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 42220960 - 42220880
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtgg |
241 |
Q |
| |
|
|||| ||||||||| ||| |||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
42220960 |
ctttcaactcatacatttttcggtcttttggctaagatcaagtgtagtatct-ttcttattagtttaatatctgatatgtgg |
42220880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 42872560 - 42872514
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatct |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
42872560 |
aactcatacctttctcggccttttggctaagattaagtgtagtatct |
42872514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 42092013 - 42092093
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtgg |
241 |
Q |
| |
|
|||| ||||||||||||||| |||||||| |||| || ||||||| ||| |||||||||| |||||||||||||||||||| |
|
|
| T |
42092013 |
ctttaaactcatacctttctttgccttttg-ctaaaattaagtgtaatatttgttcttatcagtttaatatctgatatgtgg |
42092093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 44583111 - 44583162
Alignment:
| Q |
222 |
gtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttt |
274 |
Q |
| |
|
||||||||||||||||||| || |||||| ||||||||||||||||||||||| |
|
|
| T |
44583111 |
gtttaatatctgatatgtgaac-aatggtacacacgatattaaattacttttt |
44583162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 42554709 - 42554655
Alignment:
| Q |
228 |
tatctgatatgtggaccaatggttcacacgatattaaattacttttttgaggggg |
282 |
Q |
| |
|
|||||||||||||| ||||| | |||||||||||||||| ||||||||||||| |
|
|
| T |
42554709 |
tatctgatatgtgggtcaatgaattacacgatattaaattatttttttgaggggg |
42554655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 42872471 - 42872408
Alignment:
| Q |
319 |
gtgtcgtcaatgtgttgcactatagcattggtctggcgcaccccaccaattcaagtttaaattttt |
384 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||| ||| ||||||||||||||| |||||||| ||||| |
|
|
| T |
42872471 |
gtgtcgtctatgtgttgcactattgca-tgggctgacgcaccccaccaatt-aagtttaatttttt |
42872408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 135; Significance: 3e-70; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 160 - 369
Target Start/End: Complemental strand, 11652507 - 11652298
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
11652507 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggcccaatgggtcacacgat |
11652408 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgca |
358 |
Q |
| |
|
||||||||| ||||||||||||| || |||||| | |||||||||| | ||||||||| |||||| | |||||||||||||| ||| ||| |||||||| |
|
|
| T |
11652407 |
attaaattatttttttgagggggagaagccactccaatagcttgctattgggcttcttgagtgtcgcctatgtgttgcactattgca-tgggctggcgca |
11652309 |
T |
|
| Q |
359 |
ccccaccaatt |
369 |
Q |
| |
|
||||||||||| |
|
|
| T |
11652308 |
ccccaccaatt |
11652298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 160 - 375
Target Start/End: Complemental strand, 49106644 - 49106428
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
49106644 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggtccaatggatcacacgat |
49106545 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgca |
358 |
Q |
| |
|
||||||||||||||||||||||| || | ||| | |||||||||||||| | ||||| ||||||| |||||||||||||| |||| | |||||| |
|
|
| T |
49106544 |
attaaattacttttttgagggggagaagtcaccttagtagcttgctactggatttcttatgtgtcgctcatgtgttgcactattgcatgagctaggcgca |
49106445 |
T |
|
| Q |
359 |
ccccaccaattcaagtt |
375 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
49106444 |
ccccaccaattctagtt |
49106428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 168 - 375
Target Start/End: Complemental strand, 3461249 - 3461042
Alignment:
| Q |
168 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
267 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
3461249 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgactcaatgggtcacacgatattaaatt |
3461150 |
T |
|
| Q |
268 |
acttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcaccccacca |
366 |
Q |
| |
|
|||||||| |||||| || |||| || | |||||||||| | || |||| | |||||||| ||| |||||||||| |||| || ||||| |||||||||| |
|
|
| T |
3461149 |
acttttttaagggggagaagccatttcaatagcttgctattgggtttctcgagtgtcgtctatgcgttgcactattgcatagg-ctggcacaccccacca |
3461051 |
T |
|
| Q |
367 |
attcaagtt |
375 |
Q |
| |
|
|| |||||| |
|
|
| T |
3461050 |
atacaagtt |
3461042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 160 - 315
Target Start/End: Complemental strand, 50077314 - 50077158
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||| |
|
|
| T |
50077314 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgttccaatggttcacatgat |
50077215 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttct |
315 |
Q |
| |
|
||||||||||||||||||||||| || ||||||| | |||||||||| | ||||||| |
|
|
| T |
50077214 |
attaaattacttttttgagggggagaagccacttcaatagcttgctattgggcttct |
50077158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 165 - 383
Target Start/End: Complemental strand, 49108743 - 49108524
Alignment:
| Q |
165 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaa |
264 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
49108743 |
aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgactcaatgggtcacacgatattaa |
49108644 |
T |
|
| Q |
265 |
attacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcacccca |
363 |
Q |
| |
|
|||||||||||||||||| || | || |||||||||||| | | |||||| ||||||| |||||||||||||| |||| | ||||||||||| |
|
|
| T |
49108643 |
attacttttttgagggggagaagtcatcacagtagcttgctattggacttcttatgtgtcgctcatgtgttgcactattgcatgagctaggcgcacccca |
49108544 |
T |
|
| Q |
364 |
ccaattcaagtttaaatttt |
383 |
Q |
| |
|
||||| | ||||||| |||| |
|
|
| T |
49108543 |
ccaatcctagtttaattttt |
49108524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 26998846 - 26998735
Alignment:
| Q |
169 |
catacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaatta |
268 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26998846 |
catacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggtccacacgatattaaatta |
26998747 |
T |
|
| Q |
269 |
cttttttgaggg |
280 |
Q |
| |
|
||||||| |||| |
|
|
| T |
26998746 |
ctttttttaggg |
26998735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 169 - 274
Target Start/End: Complemental strand, 26984773 - 26984668
Alignment:
| Q |
169 |
catacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaatta |
268 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26984773 |
catacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccaatggtccacacgatattaaatta |
26984674 |
T |
|
| Q |
269 |
cttttt |
274 |
Q |
| |
|
|||||| |
|
|
| T |
26984673 |
cttttt |
26984668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 48205832 - 48205943
Alignment:
| Q |
169 |
catacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaatta |
268 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||| ||||| ||| |||||||||||| |
|
|
| T |
48205832 |
catacctttctcggccttttagctaagattaagtgtagtatctgttcttattaatttaatatcttatatgtggaccattggtttacatgatattaaatta |
48205931 |
T |
|
| Q |
269 |
cttttttgaggg |
280 |
Q |
| |
|
|||||||||||| |
|
|
| T |
48205932 |
cttttttgaggg |
48205943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 21503706 - 21503792
Alignment:
| Q |
196 |
atcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttttgaggggg |
282 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||||||||||||||||| ||||||||||||| |
|
|
| T |
21503706 |
atcaagtgtagtatctgttcttatcagtttaatatctgatatgtggctcaataggtcacacgatattaaattatttttttgaggggg |
21503792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 41013651 - 41013548
Alignment:
| Q |
170 |
atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattac |
269 |
Q |
| |
|
|||| |||||||||||||||| |||||| |||| || ||| |||||||||| ||||||||||||||||||||||||| |||||||| | |||||||||| |
|
|
| T |
41013651 |
atacttttctcggccttttggttaagattaagtataatatatgttcttatccgtttaatatctgatatgtggaccaagggttcacatggtattaaattat |
41013552 |
T |
|
| Q |
270 |
tttt |
273 |
Q |
| |
|
|||| |
|
|
| T |
41013551 |
tttt |
41013548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 275
Target Start/End: Original strand, 26982549 - 26982646
Alignment:
| Q |
175 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttt |
274 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||| ||| ||||| ||||| ||||||||| ||||| || ||| |||||||||| | ||||| |
|
|
| T |
26982549 |
tttctcggcctcttggctaagatcaagtgtagcatctgttatta---gtttagtatctaatatgtggatcaatgatttacatgatattaaatcatttttt |
26982645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 277
Target Start/End: Original strand, 35806165 - 35806238
Alignment:
| Q |
204 |
tagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttttga |
277 |
Q |
| |
|
|||||| |||||||||| ||||||||| |||||||| | |||| || |||||||||||||||||||||||| |
|
|
| T |
35806165 |
tagtatttgttcttatcagtttaatatatgatatgtaatctaatgagtcgcacgatattaaattacttttttga |
35806238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 49533730 - 49533638
Alignment:
| Q |
169 |
catacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaatta |
268 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||| | ||||||||||||| ||||||||||||||| |||| | |||||||||||||||||| |
|
|
| T |
49533730 |
catacctttctcggccctt-ggctaagatcaagtgca-tatctgttcttat-----taatatctgatatgttactcaataggtcacacgatattaaatta |
49533638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 54677590 - 54677633
Alignment:
| Q |
232 |
tgatatgtggaccaatggttcacacgatattaaattactttttt |
275 |
Q |
| |
|
|||||||||| | ||||| ||||||||||||||||||||||||| |
|
|
| T |
54677590 |
tgatatgtggtctaatggatcacacgatattaaattactttttt |
54677633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 34481155 - 34481105
Alignment:
| Q |
225 |
taatatctgatatgtggaccaatggttcacacgatattaaattactttttt |
275 |
Q |
| |
|
|||||||||||||||| | ||||| | |||| ||||||||||||||||||| |
|
|
| T |
34481155 |
taatatctgatatgtgaatcaatgatccacaagatattaaattactttttt |
34481105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 6432010 - 6431957
Alignment:
| Q |
175 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaat |
228 |
Q |
| |
|
||||||||||| ||||||||||||| || |||||||| ||||||| ||||||| |
|
|
| T |
6432010 |
tttctcggcctattggctaagatcaggtttagtatctcttcttattagtttaat |
6431957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 34481191 - 34481155
Alignment:
| Q |
173 |
cctttctcggccttttggctaagatcaagtgtagtat |
209 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
34481191 |
cctttctcagccttttggctaagatcgagtgtagtat |
34481155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 122; Significance: 2e-62; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 168 - 384
Target Start/End: Original strand, 7524968 - 7525185
Alignment:
| Q |
168 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
267 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
7524968 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgatccaatggatcacacgatattaaatt |
7525067 |
T |
|
| Q |
268 |
acttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcaccccacca |
366 |
Q |
| |
|
||||||||||||||| |||||| | | ||||||||||| || || |||| ||||||||| ||| |||||||||| |||| || |||||||||||||| |
|
|
| T |
7525068 |
acttttttgagggggagaggccgccttagtagcttgctgctgggtttctcatgtgtcgtccatgcgttgcactattgcatgggctaggcgcaccccacca |
7525167 |
T |
|
| Q |
367 |
attcaagtttaaattttt |
384 |
Q |
| |
|
||| ||||||| ||||| |
|
|
| T |
7525168 |
attttagtttaatttttt |
7525185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 1716567 - 1716444
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggacc-aatggttcacacga |
258 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
1716567 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggtccaaatgggtcacacga |
1716468 |
T |
|
| Q |
259 |
tattaaattacttttttgaggggg |
282 |
Q |
| |
|
||||||||||||||||| |||||| |
|
|
| T |
1716467 |
tattaaattacttttttaaggggg |
1716444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 159 - 371
Target Start/End: Original strand, 3643631 - 3643843
Alignment:
| Q |
159 |
acttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacga |
258 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||| |||||||| |
|
|
| T |
3643631 |
actttaaattcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggcccattgggtcacacga |
3643730 |
T |
|
| Q |
259 |
tattaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgc |
357 |
Q |
| |
|
||||||||||||||||| |||||| || | | | |||||||||| | || |||| | |||| | |||||||||||||| ||||||| ||||||| |
|
|
| T |
3643731 |
tattaaattacttttttaagggggagaaactatcacaatagcttgctattgggtttctcgagtgttgcttatgtgttgcactattgcattgg-ctggcgc |
3643829 |
T |
|
| Q |
358 |
accccaccaattca |
371 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
3643830 |
accccaccaattca |
3643843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 172 - 280
Target Start/End: Original strand, 4103249 - 4103357
Alignment:
| Q |
172 |
acctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattactt |
271 |
Q |
| |
|
||||||||| || |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||||| ||| |
|
|
| T |
4103249 |
acctttctcagcattttggttaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggcccaatagtccacacgatattaaattgctt |
4103348 |
T |
|
| Q |
272 |
ttttgaggg |
280 |
Q |
| |
|
|||| |||| |
|
|
| T |
4103349 |
tttttaggg |
4103357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 5350672 - 5350777
Alignment:
| Q |
201 |
gtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttttgagggg-ggaggccacttaagtagc |
299 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||||||| ||| |||||||| ||| |||| ||||||| |
|
|
| T |
5350672 |
gtgtagtatctattgttatcagtttaatatctgatatgtgggacaatggtccacacgatattaaatttatttcttgaggggtagagtccaccaaagtagc |
5350771 |
T |
|
| Q |
300 |
ttgcta |
305 |
Q |
| |
|
|||||| |
|
|
| T |
5350772 |
ttgcta |
5350777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 16037861 - 16037966
Alignment:
| Q |
170 |
atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattac |
269 |
Q |
| |
|
|||| |||||||||| ||| ||||||||||||||||||| ||||||||| ||||||| ||||| |||| | ||||| ||| ||||||||||||||| |
|
|
| T |
16037861 |
atacttttctcggccgtttt-ctaagatcaagtgtagtatttgttcttattatcttaatatttgata-gtggtctaatgggtcaaacgatattaaattac |
16037958 |
T |
|
| Q |
270 |
ttttttga |
277 |
Q |
| |
|
|||||||| |
|
|
| T |
16037959 |
ttttttga |
16037966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 19261216 - 19261152
Alignment:
| Q |
175 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgt |
239 |
Q |
| |
|
|||||| |||||||| |||||||||||||| ||| |||||||||| ||| |||||||||||||| |
|
|
| T |
19261216 |
tttctcagccttttgattaagatcaagtgtaatatatgttcttatccgttaaatatctgatatgt |
19261152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 13636366 - 13636426
Alignment:
| Q |
222 |
gtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttttgaggggg |
282 |
Q |
| |
|
||||||||||||||||||||| ||| ||| |||||| |||||||||| || ||||||||| |
|
|
| T |
13636366 |
gtttaatatctgatatgtggatcaacggtccacacggtattaaattaagttcttgaggggg |
13636426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 114; Significance: 1e-57; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 160 - 324
Target Start/End: Complemental strand, 10796005 - 10795840
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
10796005 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgacccaatgggtcacacgat |
10795906 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcg |
324 |
Q |
| |
|
||||||||||||||||||||||| || ||||||| | |||||||||| ||||||||| ||||||| |
|
|
| T |
10795905 |
attaaattacttttttgagggggagaagccacttcaatagcttgctattaggcttctcatgtgtcg |
10795840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 160 - 383
Target Start/End: Complemental strand, 10791767 - 10791543
Alignment:
| Q |
160 |
cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgat |
259 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| ||| |
|
|
| T |
10791767 |
ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgatccaatgggtcacatgat |
10791668 |
T |
|
| Q |
260 |
attaaattacttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgca |
358 |
Q |
| |
|
||||||||||||||||||||||| || ||||||| | |||||||||| ||||||||| ||||||| || |||||||||| |||| || || || |
|
|
| T |
10791667 |
attaaattacttttttgagggggagaagccacttcaatagcttgctattaggcttctcatgtgtcgctcgtgcgttgcactattgcatgagttaggtaca |
10791568 |
T |
|
| Q |
359 |
ccccaccaattcaagtttaaatttt |
383 |
Q |
| |
|
|||||||||||| ||||||| |||| |
|
|
| T |
10791567 |
ccccaccaattctagtttaactttt |
10791543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 168 - 365
Target Start/End: Original strand, 30521242 - 30521440
Alignment:
| Q |
168 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
267 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||| |||| |
|
|
| T |
30521242 |
tcatacctttctcgaccttttggctgagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtggaccatcgcctcacacgatattcaatt |
30521341 |
T |
|
| Q |
268 |
acttttttgaggggg-gaggccacttaagtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcaccccacc |
365 |
Q |
| |
|
||||||||||||| ||| ||||| |||||||||| | || ||| |||||||| || ||||||||| ||||||| ||||||||||||||| |
|
|
| T |
30521342 |
tattttttgagggggagagtccactactatagcttgctattgggtctctcaagtgtcgtctttgctttgcactattgcattggcctggcgcaccccacc |
30521440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 222 - 365
Target Start/End: Original strand, 13136608 - 13136752
Alignment:
| Q |
222 |
gtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttttgaggggggag-gccacttaagtagcttgctactaggcttcttgtgt |
320 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | |||| | |||||||||||||| |||||| ||| |
|
|
| T |
13136608 |
gtttaatatctgatatgtggaccaatggtccacacgatattaaattacttttttgagagggaggagccattgcagtagcttgctactctgcttctcttgt |
13136707 |
T |
|
| Q |
321 |
gtcgtcaatgtgttgcactatagcattggtctggcgcaccccacc |
365 |
Q |
| |
|
|||| |||| |||||||||||||||| || |||||||||||||| |
|
|
| T |
13136708 |
gtcgctaatgcgttgcactatagcattagtttggcgcaccccacc |
13136752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 170 - 280
Target Start/End: Original strand, 8875691 - 8875803
Alignment:
| Q |
170 |
atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaat--t |
267 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| | | |||||||||||||| | |
|
|
| T |
8875691 |
atacatttcccggccttttggctaagatcaagtgtaatatctgttcttatcaatttaatatctgatatgtggtccaatagattacacgatattaaattat |
8875790 |
T |
|
| Q |
268 |
acttttttgaggg |
280 |
Q |
| |
|
||||||||||||| |
|
|
| T |
8875791 |
acttttttgaggg |
8875803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 11333273 - 11333344
Alignment:
| Q |
211 |
tgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttttgaggggg |
282 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
11333273 |
tgttcttatcagtttaatatctgatatgtggtccaacggatcacacgatattaaattacttttttgaggggg |
11333344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 10509478 - 10509551
Alignment:
| Q |
294 |
agtagcttgctactaggcttcttgtgtgtcgtcaatgtgttgcactatagcattggtctggcgcaccccaccaa |
367 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||| |||||||||||| |
|
|
| T |
10509478 |
agtagcttgctactcggcttcttgtgtgtcgctaatgcgttgcactatagcattggcttggagcaccccaccaa |
10509551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 274
Target Start/End: Original strand, 21216032 - 21216131
Alignment:
| Q |
175 |
tttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttt |
274 |
Q |
| |
|
||||| || |||||| ||||||||| || ||| |||| |||||||| ||||||||||| |||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
21216032 |
tttcttggtcttttgactaagatcatgtatagcatctattcttatcagtttaatatcttatatgtggctcaatgaatcacaaaatattaaattacttttt |
21216131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 27134511 - 27134625
Alignment:
| Q |
168 |
tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaatt |
267 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||| | |||| ||| ||||||||||||| |
|
|
| T |
27134511 |
tcatacctttttcggccttttcactaagatcaaatctagtatctgttcttattggtttaatatctgatatgtggtctaatgagtcaaacgatattaaatt |
27134610 |
T |
|
| Q |
268 |
acttttttgaggggg |
282 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
27134611 |
acttttttgaggggg |
27134625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 282
Target Start/End: Original strand, 8128149 - 8128256
Alignment:
| Q |
174 |
ctttctcggccttttggctaagatcaagtgtagtatctgttcttatcggtttaatatctgatatgtggaccaatggttcacacgatattaaattactttt |
273 |
Q |
| |
|
|||||||| ||||||| |||||| ||||||||||| ||||||| | ||||||||| |||||||||| ||||||| |||||| |||||||||| ||| |
|
|
| T |
8128149 |
ctttctcgttcttttggttaagattaagtgtagtatatgttctttttagtttaatatatgatatgtgggccaatgg-tcacacaatattaaatttatttc |
8128247 |
T |
|
| Q |
274 |
ttgaggggg |
282 |
Q |
| |
|
||||||||| |
|
|
| T |
8128248 |
ttgaggggg |
8128256 |
T |
|
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Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 15758608 - 15758562
Alignment:
| Q |
170 |
atacctttctcggccttttggctaagatcaagtgtagtatctgttct |
216 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
15758608 |
atacctttctcagccttttggctaagatcaagtgtaatatctgttct |
15758562 |
T |
|
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Target: scaffold0549 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0549
Description:
Target: scaffold0549; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 5450 - 5507
Alignment:
| Q |
222 |
gtttaatatctgatatgtggaccaatggttcacacgatattaaattacttttttgagg |
279 |
Q |
| |
|
|||||||||||||||| ||| ||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
5450 |
gtttaatatctgatatatgggccaattgttcacacgatattaaatttattttttgagg |
5507 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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