View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16262_low_7 (Length: 370)
Name: NF16262_low_7
Description: NF16262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16262_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 20 - 360
Target Start/End: Original strand, 1265906 - 1266245
Alignment:
| Q |
20 |
ctaacttcctataatctcaaattcacttctcatcatcccaaaatatatattagcaccacnnnnnnnnnnntcatctccatgatggtggttcttaatatac |
119 |
Q |
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| T |
1265906 |
ctaacttcctataatctcaaattcacttctcatcatcccaaaatatatattggcaccacaaaaaaaaaa-tcatctccatgatggtggttcttaatatac |
1266004 |
T |
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| Q |
120 |
ttttgttcatactagtgacttttctatttaaactcttgtatgaaaacctatcatgttacttcctcactccactacgcatcaagaaaatcatggagatgca |
219 |
Q |
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| T |
1266005 |
ttttgttcatactagtgacttttctatttaaactcttgtatgaaaacctatcatgttacttcctcactccactgcgcatcaagaaaatcatggagatgca |
1266104 |
T |
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| Q |
220 |
aggtgttcggggcccgagacctagcttcttcaccgggaacatcctcgacatggcttcccttgtttccaaatcaacctcacaagacatgaaaactataagc |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1266105 |
aggtgttcggggcccgagacctagcttcttcaccgggaacatcctcgacatggcttcccttgtttccaaatcaacctcacaagacatgaaaactataagc |
1266204 |
T |
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| Q |
320 |
catgacattgttggtcgccttcttcctcattttcttctctg |
360 |
Q |
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| T |
1266205 |
catgacattgtcggtcgccttcttcctcattttcttctctg |
1266245 |
T |
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