View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16265_high_15 (Length: 393)

Name: NF16265_high_15
Description: NF16265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16265_high_15
NF16265_high_15
[»] chr7 (31 HSPs)
chr7 (1-382)||(38326633-38327015)
chr7 (215-277)||(27462428-27462490)
chr7 (215-278)||(19416520-19416583)
chr7 (223-278)||(10244733-10244788)
chr7 (215-278)||(16577852-16577915)
chr7 (215-278)||(16587747-16587810)
chr7 (215-274)||(19599155-19599214)
chr7 (215-278)||(40752831-40752894)
chr7 (221-278)||(18714454-18714511)
chr7 (237-290)||(21286344-21286397)
chr7 (230-278)||(44558781-44558829)
chr7 (215-278)||(21105609-21105672)
chr7 (215-278)||(31038514-31038577)
chr7 (215-274)||(41237916-41237975)
chr7 (233-292)||(41527552-41527611)
chr7 (215-278)||(46987092-46987155)
chr7 (215-278)||(47607902-47607965)
chr7 (216-278)||(5352335-5352397)
chr7 (215-289)||(5579688-5579762)
chr7 (216-274)||(19626518-19626576)
chr7 (215-277)||(27833393-27833455)
chr7 (216-278)||(46737791-46737853)
chr7 (240-289)||(3672569-3672618)
chr7 (233-278)||(8615029-8615074)
chr7 (217-278)||(43579047-43579108)
chr7 (215-278)||(2512312-2512378)
chr7 (215-278)||(20243261-20243325)
chr7 (235-291)||(25888893-25888949)
chr7 (218-278)||(38374186-38374246)
chr7 (230-278)||(42336076-42336124)
chr7 (225-277)||(45046217-45046269)
[»] chr4 (48 HSPs)
chr4 (215-278)||(56551584-56551647)
chr4 (216-278)||(47814244-47814306)
chr4 (215-278)||(2431003-2431066)
chr4 (219-278)||(10564461-10564520)
chr4 (215-278)||(11949755-11949818)
chr4 (215-282)||(22630352-22630419)
chr4 (215-274)||(43034334-43034393)
chr4 (215-289)||(28435240-28435314)
chr4 (213-278)||(42139850-42139915)
chr4 (222-278)||(20383494-20383550)
chr4 (215-278)||(3936633-3936696)
chr4 (215-278)||(7230286-7230349)
chr4 (215-278)||(9946433-9946496)
chr4 (215-278)||(16304090-16304153)
chr4 (215-289)||(6087742-6087816)
chr4 (222-278)||(675924-675980)
chr4 (218-278)||(16431622-16431682)
chr4 (215-271)||(49041973-49042029)
chr4 (215-278)||(836227-836290)
chr4 (215-289)||(2888868-2888943)
chr4 (215-278)||(5924655-5924718)
chr4 (215-278)||(11198334-11198397)
chr4 (215-278)||(19588160-19588223)
chr4 (230-289)||(19854560-19854619)
chr4 (215-274)||(19908702-19908761)
chr4 (223-278)||(20799394-20799449)
chr4 (215-278)||(23247590-23247653)
chr4 (215-278)||(23809955-23810018)
chr4 (215-278)||(24664983-24665046)
chr4 (215-274)||(24885792-24885851)
chr4 (215-274)||(32711790-32711849)
chr4 (215-278)||(35287499-35287562)
chr4 (215-278)||(43782297-43782360)
chr4 (235-278)||(51458684-51458727)
chr4 (215-278)||(54857607-54857670)
chr4 (215-278)||(10519141-10519208)
chr4 (215-289)||(19479469-19479543)
chr4 (223-289)||(22040645-22040711)
chr4 (237-278)||(2186347-2186388)
chr4 (217-278)||(14577501-14577562)
chr4 (236-289)||(34247435-34247488)
chr4 (221-274)||(40070966-40071019)
chr4 (237-278)||(52270044-52270085)
chr4 (222-278)||(897431-897487)
chr4 (238-278)||(21052572-21052612)
chr4 (225-277)||(23160047-23160099)
chr4 (230-278)||(46676505-46676553)
chr4 (237-289)||(49021761-49021813)
[»] chr2 (44 HSPs)
chr2 (215-278)||(22523004-22523067)
chr2 (217-278)||(7206131-7206192)
chr2 (215-278)||(35820293-35820356)
chr2 (215-274)||(27848167-27848227)
chr2 (221-289)||(29734686-29734754)
chr2 (215-278)||(10735823-10735886)
chr2 (215-278)||(22061293-22061356)
chr2 (215-278)||(24592838-24592901)
chr2 (215-278)||(25186234-25186297)
chr2 (215-278)||(29544633-29544696)
chr2 (215-274)||(34977214-34977273)
chr2 (215-278)||(44526134-44526197)
chr2 (216-278)||(8781643-8781705)
chr2 (215-289)||(41859847-41859921)
chr2 (217-278)||(41763872-41763933)
chr2 (238-278)||(9686463-9686503)
chr2 (222-278)||(20565074-20565130)
chr2 (222-278)||(43117189-43117245)
chr2 (215-274)||(2256981-2257040)
chr2 (215-278)||(20455897-20455960)
chr2 (215-278)||(30089055-30089118)
chr2 (215-278)||(30125659-30125722)
chr2 (215-274)||(31815879-31815938)
chr2 (215-278)||(42066718-42066781)
chr2 (215-278)||(44810711-44810774)
chr2 (216-278)||(19212964-19213026)
chr2 (236-278)||(25598575-25598617)
chr2 (215-277)||(41778936-41778998)
chr2 (217-278)||(4927443-4927504)
chr2 (215-276)||(11953954-11954014)
chr2 (216-261)||(42791318-42791363)
chr2 (238-274)||(231608-231644)
chr2 (215-271)||(660814-660870)
chr2 (225-289)||(8091160-8091224)
chr2 (238-278)||(9383224-9383264)
chr2 (238-278)||(10156023-10156063)
chr2 (230-278)||(12124551-12124599)
chr2 (215-287)||(20120713-20120785)
chr2 (230-278)||(21558813-21558861)
chr2 (222-278)||(22608533-22608589)
chr2 (230-278)||(24593382-24593430)
chr2 (222-278)||(31543018-31543074)
chr2 (213-273)||(37830724-37830784)
chr2 (222-278)||(43043164-43043220)
[»] scaffold0011 (2 HSPs)
scaffold0011 (215-289)||(7717-7791)
scaffold0011 (215-278)||(185269-185332)
[»] chr3 (46 HSPs)
chr3 (215-289)||(38130951-38131025)
chr3 (215-278)||(25340916-25340979)
chr3 (215-278)||(25441492-25441555)
chr3 (215-287)||(48849755-48849826)
chr3 (215-274)||(4601854-4601913)
chr3 (215-278)||(14827531-14827594)
chr3 (223-278)||(24428473-24428528)
chr3 (215-278)||(29631192-29631255)
chr3 (215-278)||(35863805-35863868)
chr3 (215-278)||(45431954-45432017)
chr3 (215-278)||(45885469-45885532)
chr3 (215-289)||(53996294-53996368)
chr3 (235-278)||(977953-977996)
chr3 (215-278)||(2662098-2662161)
chr3 (215-278)||(11358240-11358303)
chr3 (223-282)||(16663236-16663295)
chr3 (215-278)||(16792966-16793029)
chr3 (235-278)||(21914847-21914890)
chr3 (215-278)||(22722408-22722471)
chr3 (215-278)||(27185483-27185546)
chr3 (215-278)||(32843254-32843317)
chr3 (215-278)||(34899103-34899166)
chr3 (215-274)||(51882192-51882251)
chr3 (215-278)||(52119382-52119445)
chr3 (215-261)||(8075808-8075854)
chr3 (215-277)||(22799718-22799780)
chr3 (216-278)||(38034802-38034864)
chr3 (235-273)||(42398001-42398039)
chr3 (236-278)||(43345020-43345062)
chr3 (220-278)||(44579642-44579700)
chr3 (221-274)||(2186425-2186478)
chr3 (237-278)||(10498709-10498750)
chr3 (230-275)||(11969657-11969702)
chr3 (238-279)||(17507714-17507755)
chr3 (221-278)||(23147976-23148033)
chr3 (215-274)||(334839-334899)
chr3 (215-275)||(8136624-8136684)
chr3 (230-274)||(19468461-19468505)
chr3 (222-278)||(20400083-20400139)
chr3 (218-278)||(21506753-21506813)
chr3 (230-278)||(32629086-32629134)
chr3 (238-278)||(35392009-35392049)
chr3 (215-278)||(39100075-39100139)
chr3 (238-274)||(43011332-43011368)
chr3 (238-278)||(50570204-50570244)
chr3 (222-278)||(55126012-55126068)
[»] chr6 (26 HSPs)
chr6 (216-289)||(655742-655815)
chr6 (215-278)||(26400870-26400933)
chr6 (215-289)||(14296949-14297023)
chr6 (215-274)||(8569719-8569778)
chr6 (215-278)||(17151242-17151305)
chr6 (215-278)||(29740488-29740551)
chr6 (215-278)||(32053794-32053857)
chr6 (216-278)||(20744144-20744206)
chr6 (230-274)||(1918465-1918509)
chr6 (215-271)||(21598970-21599026)
chr6 (215-274)||(2726409-2726468)
chr6 (215-278)||(4455588-4455651)
chr6 (215-278)||(5040825-5040888)
chr6 (223-278)||(7081654-7081709)
chr6 (223-278)||(8637437-8637492)
chr6 (215-278)||(13376318-13376381)
chr6 (235-278)||(18254113-18254156)
chr6 (215-278)||(21847200-21847263)
chr6 (223-274)||(31971539-31971590)
chr6 (215-278)||(33824887-33824950)
chr6 (217-278)||(2473609-2473670)
chr6 (237-278)||(8810646-8810687)
chr6 (221-278)||(9392666-9392723)
chr6 (215-260)||(15187087-15187132)
chr6 (215-260)||(15473474-15473519)
chr6 (215-278)||(34828312-34828376)
[»] scaffold0180 (1 HSPs)
scaffold0180 (215-278)||(17738-17800)
[»] chr8 (35 HSPs)
chr8 (215-278)||(32051524-32051587)
chr8 (215-273)||(12800892-12800950)
chr8 (215-272)||(12748913-12748970)
chr8 (213-278)||(13286137-13286201)
chr8 (215-291)||(8717467-8717543)
chr8 (237-289)||(12910820-12910872)
chr8 (213-277)||(36781415-36781479)
chr8 (215-278)||(444419-444482)
chr8 (215-278)||(11708992-11709055)
chr8 (215-274)||(13357433-13357492)
chr8 (215-278)||(19163528-19163591)
chr8 (215-278)||(27587227-27587290)
chr8 (215-289)||(6235543-6235617)
chr8 (215-289)||(7996935-7997009)
chr8 (215-277)||(25136836-25136898)
chr8 (224-278)||(42208470-42208524)
chr8 (223-287)||(32421566-32421630)
chr8 (234-278)||(43962035-43962079)
chr8 (215-274)||(15001267-15001326)
chr8 (215-274)||(17898089-17898148)
chr8 (215-274)||(32944832-32944891)
chr8 (215-278)||(40679721-40679784)
chr8 (215-277)||(24838162-24838224)
chr8 (236-278)||(30427737-30427779)
chr8 (215-273)||(37141368-37141426)
chr8 (233-278)||(11771713-11771758)
chr8 (225-278)||(24195255-24195308)
chr8 (221-278)||(37938501-37938558)
chr8 (237-289)||(2554226-2554278)
chr8 (230-278)||(9656004-9656052)
chr8 (215-291)||(17704006-17704082)
chr8 (230-278)||(19778071-19778119)
chr8 (230-278)||(23852917-23852965)
chr8 (218-278)||(39821890-39821950)
chr8 (230-274)||(40795387-40795431)
[»] chr5 (34 HSPs)
chr5 (215-278)||(22522793-22522856)
chr5 (217-278)||(16133059-16133120)
chr5 (221-274)||(20721060-20721113)
chr5 (230-291)||(20927632-20927693)
chr5 (215-278)||(6489013-6489076)
chr5 (215-278)||(6624782-6624845)
chr5 (215-274)||(13864354-13864413)
chr5 (215-278)||(17090872-17090935)
chr5 (215-278)||(28207138-28207201)
chr5 (215-278)||(37932336-37932399)
chr5 (215-278)||(40715941-40716004)
chr5 (215-289)||(18331702-18331776)
chr5 (216-289)||(10704324-10704397)
chr5 (215-276)||(26655472-26655533)
chr5 (215-276)||(26927057-26927118)
chr5 (237-289)||(18489090-18489142)
chr5 (230-274)||(35109410-35109454)
chr5 (215-278)||(3445239-3445302)
chr5 (215-278)||(16036833-16036896)
chr5 (215-278)||(26409259-26409322)
chr5 (215-278)||(34436857-34436920)
chr5 (215-289)||(11720889-11720962)
chr5 (221-291)||(12189985-12190055)
chr5 (215-277)||(23036699-23036761)
chr5 (216-278)||(34191439-34191501)
chr5 (216-274)||(40837896-40837954)
chr5 (221-278)||(31602823-31602880)
chr5 (233-274)||(41650949-41650990)
chr5 (215-278)||(4009872-4009936)
chr5 (230-278)||(18391606-18391654)
chr5 (215-279)||(18789041-18789105)
chr5 (215-278)||(24636639-24636703)
chr5 (221-261)||(39938781-39938821)
chr5 (238-278)||(42505878-42505918)
[»] chr1 (40 HSPs)
chr1 (215-278)||(8269360-8269423)
chr1 (215-278)||(34521182-34521245)
chr1 (219-278)||(25532979-25533038)
chr1 (215-278)||(34632175-34632238)
chr1 (215-278)||(42045364-42045427)
chr1 (215-278)||(45139998-45140061)
chr1 (215-278)||(52441503-52441566)
chr1 (216-278)||(18166608-18166670)
chr1 (215-277)||(39302952-39303014)
chr1 (221-277)||(13615610-13615666)
chr1 (230-278)||(19620582-19620630)
chr1 (222-278)||(26803450-26803506)
chr1 (221-289)||(33153878-33153946)
chr1 (235-278)||(3509953-3509996)
chr1 (215-274)||(6000135-6000194)
chr1 (215-270)||(8736449-8736504)
chr1 (215-274)||(9265828-9265887)
chr1 (215-278)||(17139509-17139572)
chr1 (215-274)||(27172714-27172773)
chr1 (215-278)||(41884797-41884860)
chr1 (215-278)||(42888581-42888644)
chr1 (215-278)||(47528439-47528502)
chr1 (216-278)||(41763148-41763210)
chr1 (217-278)||(26755622-26755683)
chr1 (221-278)||(40680490-40680547)
chr1 (221-278)||(43611430-43611487)
chr1 (237-278)||(49183179-49183220)
chr1 (215-278)||(3481566-3481630)
chr1 (238-278)||(8253745-8253785)
chr1 (215-278)||(13094032-13094098)
chr1 (215-271)||(17651372-17651428)
chr1 (215-278)||(24752639-24752703)
chr1 (237-289)||(25086478-25086530)
chr1 (222-278)||(28016189-28016245)
chr1 (215-287)||(28832163-28832235)
chr1 (238-278)||(34142379-34142419)
chr1 (230-278)||(38448873-38448921)
chr1 (225-269)||(39252148-39252192)
chr1 (230-278)||(47961296-47961344)
chr1 (215-278)||(52494062-52494126)
[»] scaffold0735 (1 HSPs)
scaffold0735 (215-278)||(1534-1597)
[»] scaffold0118 (2 HSPs)
scaffold0118 (224-278)||(40004-40058)
scaffold0118 (230-274)||(45422-45466)
[»] scaffold0021 (1 HSPs)
scaffold0021 (215-289)||(161136-161210)
[»] scaffold0983 (1 HSPs)
scaffold0983 (216-277)||(3308-3369)
[»] scaffold0896 (1 HSPs)
scaffold0896 (237-278)||(3147-3188)
[»] scaffold0122 (1 HSPs)
scaffold0122 (240-289)||(31172-31221)
[»] scaffold0040 (2 HSPs)
scaffold0040 (221-278)||(58859-58916)
scaffold0040 (230-278)||(53784-53832)
[»] scaffold0026 (1 HSPs)
scaffold0026 (215-276)||(75333-75394)
[»] scaffold0005 (1 HSPs)
scaffold0005 (217-278)||(239813-239874)


Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 38326633 - 38327015
Alignment:
Q  1 aagccgttactgattcgtcacaaaccgaattgcgagagatttggcgcactggttatgtagtttcaagctgaaccaaaattacctttacaaaaattggaat 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38326633 aagccgttactgattcgtcacaaactgaattgcgagagatttggtgcattggttatgtagtttcaagctgaaccaaaattacctttacaaaaattggaat 38326732  T
Q  101 gtannnnnnngaatcgaactagtttttaagccgaattgtatcaaataactaagattgttgttgnnnnnnnnntaaaatttgaaccaaatcgaatattagg 200  Q
    |||       |||||||||| ||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||    
T  38326733 gtatttttttgaatcgaactggtttttaagccgaattgtatcaaataactaagattgttgttgaaaaaaaa-taaaatttgaaccaaatcgaatattagg 38326831  T
Q  201 acannnnnnnnn--gcggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggataagtatta 298  Q
    |             ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||||| |||||    
T  38326832 aactttttttttttgcggtggccggggtttcaacctcggaccttgcatgtattatgttttgtccataccaactgagctaaactcacaaggataaatatta 38326931  T
Q  299 ggacatttttaaacacaagggaaacatttcaaaggaatttaaacaagagagatttttgtatggacaaaatcaaaatttgttcat 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38326932 ggacatttttaaacacaagggaaacatttcaaaggaatttaaacaagagagatttttgtatggacaaaatcaaaatttgttcat 38327015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 27462428 - 27462490
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| |||||||||||||||    
T  27462428 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagcta 27462490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 19416583 - 19416520
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  19416583 ggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 19416520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 10244788 - 10244733
Alignment:
Q  223 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  10244788 gggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 10244733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 16577852 - 16577915
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| | |||||||||| ||||||||||||||  |||||||||||||||    
T  16577852 ggtggccgaggtttgaaccccagaccttgcatatattatgtattgtccctaccaactgagctaa 16577915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 16587810 - 16587747
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| | |||||||||| ||||||||||||||  |||||||||||||||    
T  16587810 ggtggccgaggtttgaaccccagaccttgcatatattatgtattgtccctaccaactgagctaa 16587747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 19599214 - 19599155
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    ||||| |||||||| |||| |||||||||||| ||||||| |||||| ||||||||||||    
T  19599214 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgag 19599155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 40752831 - 40752894
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||  |||| ||||| |||||| |||||||||||||| |||| |||||||||||    
T  40752831 ggtggccggggttcgaaccccggacattgcatatattatgtattgtccatactaactgagctaa 40752894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 18714511 - 18714454
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  18714511 cggggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 18714454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 21286397 - 21286344
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggat 290  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||| |||||||    
T  21286397 gaccttgcatatattatgtattgtccataccaattgagctaagctctcaaggat 21286344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 44558781 - 44558829
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| |||||||||| ||||||| |||||| ||||||||||||||||    
T  44558781 aacctcagaccttgcatatattatgcattgtccataccaactgagctaa 44558829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 21105672 - 21105609
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||  ||||||| ||||||||| ||||||| ||| || ||||||||||||||||    
T  21105672 ggtggtcggggttcgaacctcgaaccttgcatatattatgcattttccataccaactgagctaa 21105609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 31038514 - 31038577
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| | ||||||||||  | |||| |||||| ||||||||||||||||    
T  31038514 ggtggccggggtttgaaccccagaccttgcatacaatatgcattgtccataccaactgagctaa 31038577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 41237916 - 41237975
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    ||||| || ||||| ||||||| ||||||||| ||||| |||||||| ||||||||||||    
T  41237916 ggtggtcgaggtttgaacctcgaaccttgcatatattacgtattgtccataccaactgag 41237975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 41527611 - 41527552
Alignment:
Q  233 ctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggataa 292  Q
    |||||||||||||| ||||||| |||||| ||||||||| |||||| ||| | |||||||    
T  41527611 ctcggaccttgcatatattatgcattgtccataccaactaagctaagctcacgaggataa 41527552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 46987155 - 46987092
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| ||||||||  |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  46987155 ggtgtccggggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 46987092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 47607902 - 47607965
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| |||| ||||  ||||||||||| ||||||||| ||||  |||||||||||||||    
T  47607902 ggtggccggagtttgaaccctggaccttgcatatattatgtaatgtccctaccaactgagctaa 47607965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 5352397 - 5352335
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| ||  || ||||||||||| || ||||||||||||||  |||||||||||||||    
T  5352397 gtggccgggattcgaatctcggaccttgtatatattatgtattgtccttaccaactgagctaa 5352335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 5579762 - 5579688
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    ||||| |||||||| |||| | |||||||||| ||||||| | ||||  ||||||||||||||| ||| ||||||    
T  5579762 ggtggtcggggtttgaaccccagaccttgcatatattatgcactgtccctaccaactgagctaagctcacaagga 5579688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 274
Target Start/End: Original strand, 19626518 - 19626576
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||| |||| |||| |||||||||||| ||||||| |||||| | ||||||||||    
T  19626518 gtggccggtgtttgaaccccggaccttgcatatattatgcattgtccaaaccaactgag 19626576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 27833393 - 27833455
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    ||||| |||||||| |||| |||||||| ||| ||||||| ||||||  ||||||||||||||    
T  27833393 ggtggtcggggtttgaaccccggaccttacatatattatgcattgtccttaccaactgagcta 27833455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 46737853 - 46737791
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| |||| |||| |||||||||||| ||||||| |||||| | || |||||||||||    
T  46737853 gtggccggtgtttgaaccccggaccttgcatatattatgcattgtccaaacaaactgagctaa 46737791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 3672569 - 3672618
Alignment:
Q  240 cttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    ||||||| |||||||||||||| ||| |||||||||||| ||| ||||||    
T  3672569 cttgcatatattatgtattgtccatatcaactgagctaaactcacaagga 3672618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 8615074 - 8615029
Alignment:
Q  233 ctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| ||||||| ||||||  |||||||||||||||    
T  8615074 ctcggaccttgcatatattatgcattgtccttaccaactgagctaa 8615029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 43579047 - 43579108
Alignment:
Q  217 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||  ||||  |||| |||||||||||||| ||||||  |||||||||||||||    
T  43579047 tggccggggttcgaacccaggactttgcatgtattatgcattgtccctaccaactgagctaa 43579108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 2512378 - 2512312
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatg---tattgtcaataccaactgagctaa 278  Q
    |||||||||||||| ||||||| ||||||||| |||||||    |||||  ||||||||||||||||    
T  2512378 ggtggccggggtttgaacctcgtaccttgcatatattatgctacattgttcataccaactgagctaa 2512312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 20243325 - 20243261
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgt-attatgtattgtcaataccaactgagctaa 278  Q
    |||| ||||||||  |||| |||||||||||| | |||||| |||||| ||||||||||||||||    
T  20243325 ggtgtccggggttcaaaccccggaccttgcatattattatgcattgtccataccaactgagctaa 20243261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 25888949 - 25888893
Alignment:
Q  235 cggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggata 291  Q
    |||||||||||| ||||||| || |||  ||||||||||||||| ||| ||||||||    
T  25888949 cggaccttgcatatattatgcatcgtccttaccaactgagctaagctcacaaggata 25888893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 38374186 - 38374246
Alignment:
Q  218 ggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||| ||||  ||||||||||| || |||| |||||| ||||||| ||||||||    
T  38374186 ggccggggtttgaaccctggaccttgcatatactatgcattgtccataccaattgagctaa 38374246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 42336124 - 42336076
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||||||||||||||| ||||||  || ||||||||||||    
T  42336124 aaccccggaccttgcatgtattatgcattgtccttatcaactgagctaa 42336076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 45046217 - 45046269
Alignment:
Q  225 gtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    |||| |||| |||||||||||| ||||||||| |||| ||| |||||||||||    
T  45046217 gtttgaaccccggaccttgcatatattatgtactgtccatatcaactgagcta 45046269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 56551584 - 56551647
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||||||  |||||||||||||||    
T  56551584 ggtggccggggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgagctaa 56551647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 278
Target Start/End: Original strand, 47814244 - 47814306
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||||| |||| |||||||||||| |||||||| ||||| ||||||||||||||||    
T  47814244 gtggccggggtttgaaccccggaccttgcatatattatgtgttgtccataccaactgagctaa 47814306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 2431066 - 2431003
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||| ||||||  ||||||||| | |||||||||||||||||||||||||||||    
T  2431066 ggtggtcggggtttgaacctcataccttgcatattttatgtattgtcaataccaactgagctaa 2431003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 10564461 - 10564520
Alignment:
Q  219 gccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| |||||| |||||| ||| |||||||||||||| ||||||||||||||||    
T  10564461 gccggggtttgaacctcagaccttacatatattatgtattgtccataccaactgagctaa 10564520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 11949755 - 11949818
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||| |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  11949755 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 11949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 22630352 - 22630419
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctc 282  Q
    ||||| |||||||| |||||| |||||||||| ||||||| ||||||| ||||||||||| |||||||    
T  22630352 ggtggtcggggtttgaacctcagaccttgcatatattatgcattgtcactaccaactgagataatctc 22630419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 43034334 - 43034393
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||||||||| |||||| |||||||||| ||||||| |||||| ||||||||||||    
T  43034334 ggtggccggggtttgaacctcagaccttgcatatattatgcattgtccataccaactgag 43034393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 28435240 - 28435314
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||| ||||||| |||| || ||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  28435240 ggtggctggggtttgaaccccgaaccttgcatatattatgcattgtccataccaactgagctaaactcacaagga 28435314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 42139915 - 42139850
Alignment:
Q  213 gcggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||||| |||| ||||| |||||||||||||| |||||| ||||||| | ||||||    
T  42139915 gcggtggccggggtttgaaccccggacattgcatgtattatgcattgtccataccaaataagctaa 42139850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 20383550 - 20383494
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  20383550 ggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 20383494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 3936696 - 3936633
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||  |||| |||||||||||| ||||||| |||||  ||||||||||||||||    
T  3936696 ggtggccggggttcgaaccccggaccttgcatatattatgcattgttcataccaactgagctaa 3936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 7230349 - 7230286
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  7230349 ggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 7230286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 9946496 - 9946433
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||| |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  9946496 ggtggtcggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 9946433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 16304090 - 16304153
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| || | |||||||||||| ||||||| |||||| ||||||||||||||||    
T  16304090 ggtggccgcggtttgaatcccggaccttgcatatattatgcattgtccataccaactgagctaa 16304153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 6087816 - 6087742
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||| ||||||| |||| | |||||||||| ||||||| ||| || |||||||||||||||| ||| ||||||    
T  6087816 ggtggctggggtttgaaccccagaccttgcatatattatgcattatctataccaactgagctaagctcacaagga 6087742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 675980 - 675924
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||| |||||||||||| ||||||| |||||| | ||||||||||||||    
T  675980 ggggtttgaaccccggaccttgcatatattatgcattgtccaaaccaactgagctaa 675924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 16431682 - 16431622
Alignment:
Q  218 ggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||| |||| | |||||||||| | ||||| |||||| ||||||||||||||||    
T  16431682 ggccggggtttgaaccccagaccttgcatattttatgcattgtccataccaactgagctaa 16431622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 49041973 - 49042029
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaact 271  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| ||| |||||    
T  49041973 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtctatatcaact 49042029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 836227 - 836290
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| ||| |||| ||||||||||||||||| |||| || ||||||  |||||||||||||||    
T  836227 ggtggtcggagtttgaacctcggaccttgcatatattttgcattgtccctaccaactgagctaa 836290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 2888943 - 2888868
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgta-ttgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||||||| |||| |||||||||||| ||||||  | |||||  ||||||||||||||| ||| ||||||    
T  2888943 ggtggccggggtttgaaccgcggaccttgcatatattatacatttgtccctaccaactgagctaagctcacaagga 2888868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 5924718 - 5924655
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| || ||||| |||| |||||||| ||| |||||||||||||| ||| ||||||||||||    
T  5924718 ggtggtcgaggtttgaaccccggaccttccatatattatgtattgtccatagcaactgagctaa 5924655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 11198397 - 11198334
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||||| |||||||  ||||| || | |||||||||||    
T  11198397 ggtggccggggtttgaaccccggaccttgcatatattatgccttgtccattctaactgagctaa 11198334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 19588223 - 19588160
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| ||||  ||||||||||| | ||||| |||||| ||||||| ||||||||    
T  19588223 ggtggccggggtttgaaccctggaccttgcatattttatgcattgtccataccaattgagctaa 19588160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 19854619 - 19854560
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||| |||| ||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  19854619 aaccccggatcttgcatatattatgcattgtccataccaactgagctaagctcacaagga 19854560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 19908761 - 19908702
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    ||||| |||||||  ||||||||||||||||| ||||||| ||||||  |||||||||||    
T  19908761 ggtggtcggggttcgaacctcggaccttgcatatattatgcattgtccttaccaactgag 19908702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 20799394 - 20799449
Alignment:
Q  223 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  20799394 gggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 20799449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 23247590 - 23247653
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| | |||||||||| |||||||  ||||| |||||||| |||||||    
T  23247590 ggtggccggggtttaaaccccagaccttgcatatattatgcgttgtccataccaaccgagctaa 23247653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 23810018 - 23809955
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| ||||  | ||||||||| |||||||  ||||| ||||||||||||||||    
T  23810018 ggtggccggggtttgaaccctgaaccttgcatatattatgctttgtccataccaactgagctaa 23809955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 24664983 - 24665046
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||  |||| |||||||||||| ||||||| ||| || ||||||||||||||||    
T  24664983 ggtggtcggggttcgaaccccggaccttgcatatattatgcattctccataccaactgagctaa 24665046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 24885792 - 24885851
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    ||||||| |||| | || |||||||||||||| | |||||||||||| ||||||||||||    
T  24885792 ggtggccagggtatgaaactcggaccttgcatattttatgtattgtccataccaactgag 24885851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 32711790 - 32711849
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    ||||||| |||||| ||||||||||| ||||| | ||||| |||||| ||||||||||||    
T  32711790 ggtggccagggtttaaacctcggaccatgcatattttatgcattgtccataccaactgag 32711849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 35287499 - 35287562
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||  |||| |||||||||||| | ||||| |||||  ||||||||||||||||    
T  35287499 ggtggccggggttggaaccccggaccttgcatattttatgcattgttcataccaactgagctaa 35287562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 43782297 - 43782360
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| || ||||| |||| | |||||||||| ||||||| ||||||| |||||||||||||||    
T  43782297 ggtggtcgaggtttgaaccgcagaccttgcatatattatgcattgtcattaccaactgagctaa 43782360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 51458727 - 51458684
Alignment:
Q  235 cggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||| | |||||||||||| ||||||||||||||||    
T  51458727 cggaccttgcatattttatgtattgtccataccaactgagctaa 51458684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 54857607 - 54857670
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||||| | ||||| |||||  |||||||| |||||||    
T  54857607 ggtggccggggtttgaaccccggaccttgcatattttatgcattgtttataccaaccgagctaa 54857670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 10519208 - 10519141
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatg----tattatgtattgtcaataccaactgagctaa 278  Q
    |||| ||||||||| ||||||| ||||||||||    ||||||| |||||| ||||||||||||||||    
T  10519208 ggtgaccggggtttgaacctcgaaccttgcatgtatatattatgcattgtctataccaactgagctaa 10519141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 19479469 - 19479543
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    ||||| |||||||| |||| |||||||||||| ||||||| |||||  |||  ||||||||||| ||| ||||||    
T  19479469 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgttcatattaactgagctaagctcacaagga 19479543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 22040711 - 22040645
Alignment:
Q  223 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||| |||| || ||||||||| ||||||| |||||| ||| |||||||||||| ||| ||||||    
T  22040711 gggtttgaaccccgaaccttgcatatattatgcattgtccatatcaactgagctaaactcgcaagga 22040645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 2186347 - 2186388
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  2186347 gaccttgcatatattatgcattgtccataccaactgagctaa 2186388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 14577501 - 14577562
Alignment:
Q  217 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||| |||  ||||| |||||| ||||||| ||||||  |||||||||||||||    
T  14577501 tggccggggtttgaactccggactttgcatatattatgcattgtccttaccaactgagctaa 14577562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 34247488 - 34247435
Alignment:
Q  236 ggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    ||||||||||| ||||||| ||||||  ||||||||||||||| ||| ||||||    
T  34247488 ggaccttgcatatattatgcattgtccttaccaactgagctaaactcacaagga 34247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 40070966 - 40071019
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||| ||| ||||||||||||| ||||||| |||||  ||||||||||||    
T  40070966 cggggtttgaacttcggaccttgcatatattatgcattgttcataccaactgag 40071019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 52270044 - 52270085
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  52270044 gaccttgcatatattatgcattgtccataccaactgagctaa 52270085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 897487 - 897431
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||| |||||||| ||| ||||||  |||||| ||||||||||||||||    
T  897487 ggggtttgaaccccggaccttacatatattatacattgtccataccaactgagctaa 897431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 21052572 - 21052612
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| ||||||||||| || ||||||||||||||||    
T  21052572 accttgcatatattatgtattatccataccaactgagctaa 21052612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 23160099 - 23160047
Alignment:
Q  225 gtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    |||| ||||||||||||| ||| ||||||| ||||||  ||||||||||||||    
T  23160099 gtttgaacctcggaccttacatatattatgcattgtccctaccaactgagcta 23160047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 46676505 - 46676553
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  46676505 aaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 46676553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 49021813 - 49021761
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||| | |||||||||||| |||||||||| ||||| ||| ||||||    
T  49021813 gaccttgcatattttatgtattgtccataccaactgcgctaaactcacaagga 49021761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 22523004 - 22523067
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||| ||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  22523004 ggtggccgggatttgaacctcgaaccttgcatatattatgtattgtccataccaactgagctaa 22523067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 7206192 - 7206131
Alignment:
Q  217 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||  |||||||||||||||    
T  7206192 tggccggggtttaaacctcggaccttgcatatattatgcattgtctctaccaactgagctaa 7206131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 35820293 - 35820356
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| |||||||||||||||||||| ||||||  |||||||||||||||    
T  35820293 ggtggccgaggtttgaaccccggaccttgcatgtattatgcattgtccctaccaactgagctaa 35820356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 27848227 - 27848167
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgta-ttgtcaataccaactgag 274  Q
    |||||||||||||| |||| |||||||||||| ||||||| | ||||||||||||||||||    
T  27848227 ggtggccggggtttgaaccccggaccttgcatatattatgcatttgtcaataccaactgag 27848167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 29734754 - 29734686
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||| |||| |||||||||||| ||||||| |||||| ||| |||||||||||| ||| ||||||    
T  29734754 cggggtttgaaccacggaccttgcatatattatgcattgtccatatcaactgagctaaactcacaagga 29734686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 10735823 - 10735886
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||||| ||||||| || |||  |||||||||||||||    
T  10735823 ggtggccggggtttgaaccccggaccttgcatatattatgcatcgtccctaccaactgagctaa 10735886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 22061356 - 22061293
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| ||| ||||||||||||| | |||||||||||  ||||||| ||||||||    
T  22061356 ggtggccggggtttgaacatcggaccttgcatattttatgtattgtacataccaattgagctaa 22061293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 24592838 - 24592901
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| | |||||||||| ||||||| ||||||  |||||||||||||||    
T  24592838 ggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaa 24592901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 25186234 - 25186297
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| ||||||| |||| |||||||||||| ||||||| |||||| ||| ||||||||||||    
T  25186234 ggtggctggggtttgaaccccggaccttgcatatattatgcattgtccatatcaactgagctaa 25186297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 29544696 - 29544633
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||||| ||||||| ||||||  |||||| ||||||||    
T  29544696 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccctaccaattgagctaa 29544633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 34977273 - 34977214
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||||||||| |||  |||||||||||| ||||||| |||||| ||||||||||||    
T  34977273 ggtggccggggtttaaactccggaccttgcatatattatgcattgtccataccaactgag 34977214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 44526197 - 44526134
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| || | |||||||||| | ||||||| |||||| ||||||||||||||||    
T  44526197 ggtggccggggtttgaatcccggaccttgcgtatattatgcattgtccataccaactgagctaa 44526134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 278
Target Start/End: Original strand, 8781643 - 8781705
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||| |||| ||||||||||||  |||||| |||||| ||||||||||||||||    
T  8781643 gtggtcggggtttgaaccccggaccttgcatacattatgcattgtccataccaactgagctaa 8781705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 41859921 - 41859847
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||||||| |||| | |||||||||| | ||||| |||||| |||||||||||| ||| ||| ||||||    
T  41859921 ggtggccggggtttgaaccccagaccttgcatattttatgcattgtccataccaactgagttaaactcacaagga 41859847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 41763872 - 41763933
Alignment:
Q  217 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||| |||| |||||| ||||| || |||| |||||| ||||||||||||||||    
T  41763872 tggccggggtttgaaccccggaccgtgcatatactatgcattgtccataccaactgagctaa 41763933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 9686503 - 9686463
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  9686503 accttgcatatattatgtattgtctataccaactgagctaa 9686463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 20565074 - 20565130
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  20565074 ggggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 20565130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 43117189 - 43117245
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||||| |||||||||| ||||||| ||||||  |||||||||||||||    
T  43117189 ggggtttgaacctcagaccttgcatatattatgcattgtccttaccaactgagctaa 43117245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 2257040 - 2256981
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||||||||  |||| | |||||||||| ||||||| |||||| ||||||||||||    
T  2257040 ggtggccggggttcgaaccccagaccttgcatatattatgcattgtccataccaactgag 2256981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 20455960 - 20455897
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||  |||| |||||||||||| ||||||| |||||| ||||||| ||||||||    
T  20455960 ggtggccgggattcgaaccccggaccttgcatatattatgcattgtccataccaattgagctaa 20455897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 30089118 - 30089055
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| ||||||||| || ||||||| ||||||  |||||||||||||||    
T  30089118 ggtggccgaggtttgaaccccggaccttgtatatattatgcattgtccctaccaactgagctaa 30089055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 30125722 - 30125659
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| ||||||||| || ||||||| ||||||  |||||||||||||||    
T  30125722 ggtggccgaggtttgaaccccggaccttgtatatattatgcattgtccctaccaactgagctaa 30125659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 31815879 - 31815938
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    ||||| |||||||| |||| |||||||||||| ||||||| ||||||  |||||||||||    
T  31815879 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgag 31815938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 42066781 - 42066718
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||  |||| |||||||||||| |||| || |||||| ||||||||||||||||    
T  42066781 ggtggccgaggttcaaaccccggaccttgcatatattgtgcattgtccataccaactgagctaa 42066718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 44810774 - 44810711
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| ||||||| |||| |||||||||||| |||||||||||| |  ||||||||| |||||    
T  44810774 ggtggctggggtttgaaccccggaccttgcatatattatgtattgcctctaccaactgggctaa 44810711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 19213026 - 19212964
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| |||||| ||| ||| ||||||||| |||||||||||||| | | ||||||||||||    
T  19213026 gtggccagggtttgaacttcgaaccttgcatatattatgtattgtccaaaacaactgagctaa 19212964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 25598575 - 25598617
Alignment:
Q  236 ggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||    
T  25598575 ggaccttgcatatattatgcattgtccataccaactgagctaa 25598617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 41778936 - 41778998
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    |||||||||| ||  ||||||||||||||||| ||||||| |||||| | | |||||||||||    
T  41778936 ggtggccgggattcgaacctcggaccttgcatatattatgcattgtccaaatcaactgagcta 41778998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 4927443 - 4927504
Alignment:
Q  217 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||| |||| |||||||| ||| |||||||  |||||  |||||||||||||||    
T  4927443 tggccggggtttgaaccccggaccttacatatattatgctttgtccctaccaactgagctaa 4927504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 11954014 - 11953954
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagct 276  Q
    |||||||||||||| || || |||| |||||| ||||||||||||||  |||||||||||||    
T  11954014 ggtggccggggttt-aatcttggacattgcatatattatgtattgtccctaccaactgagct 11953954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 42791363 - 42791318
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtc 261  Q
    ||||||||||||| |||| |||||||||||| ||||||| ||||||    
T  42791363 gtggccggggtttgaaccccggaccttgcatatattatgcattgtc 42791318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 231608 - 231644
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgag 274  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  231608 accttgcatatattatgtattgtccataccaactgag 231644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 660814 - 660870
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaact 271  Q
    ||||| |||||||| ||||  ||||||||||| ||||||| |||||| |||||||||    
T  660814 ggtggtcggggtttgaaccctggaccttgcatatattatgcattgtccataccaact 660870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 8091160 - 8091224
Alignment:
Q  225 gtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||| |||| |||||||||||| ||||||| |||||| ||||| |||||| ||| ||| ||||||    
T  8091160 gtttgaaccccggaccttgcatatattatgcattgtccatacctactgagataagctcacaagga 8091224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 9383224 - 9383264
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| ||||||| |||||| ||||||||||||||||    
T  9383224 accttgcatatattatgcattgtccataccaactgagctaa 9383264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 10156063 - 10156023
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| ||||||||||||||  |||||||||||||||    
T  10156063 accttgcatatattatgtattgtccttaccaactgagctaa 10156023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 12124599 - 12124551
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  12124599 aaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 12124551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 20120713 - 20120785
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaag 287  Q
    |||| ||||| ||| |||| || ||||||||| ||||||| ||||||  ||||||||||||||| ||| ||||    
T  20120713 ggtgtccgggatttgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaagctcacaag 20120785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 21558813 - 21558861
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||||||||| ||||||| ||||||  ||||| |||||||||    
T  21558813 aacctcggaccttgcatatattatgcattgtccttaccagctgagctaa 21558861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 22608589 - 22608533
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| ||||||  ||||||||| ||||||| ||||||  |||||||||||||||    
T  22608589 ggggtttgaacctcataccttgcatatattatgcattgtctctaccaactgagctaa 22608533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 24593430 - 24593382
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  24593430 aaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 24593382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 31543074 - 31543018
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||| |||||||||||| ||||||| ||| || |||||| |||||||||    
T  31543074 ggggtttgaaccccggaccttgcatatattatgcattatccataccatctgagctaa 31543018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 37830784 - 37830724
Alignment:
Q  213 gcggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactga 273  Q
    |||||||||||||||| || || ||| |||| || ||||||||||||||  ||||||||||    
T  37830784 gcggtggccggggtttgaatcttggatcttgtatatattatgtattgtccctaccaactga 37830724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 43043164 - 43043220
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||| ||||||||||||  |||||| |||||| |||||||| |||||||    
T  43043164 ggggtttgaaccccggaccttgcatacattatgcattgtctataccaaccgagctaa 43043220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 7791 - 7717
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    ||||| |||||||| ||||||||||||||||||| ||||| |||||| |||||||||||| ||| ||| ||||||    
T  7791 ggtggtcggggtttgaacctcggaccttgcatgttttatgcattgtccataccaactgagttaagctcgcaagga 7717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 185332 - 185269
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| ||||||||| |||| |||| ||||||| | ||||| |||||| ||||||||||||||||    
T  185332 ggtgaccggggtttgaaccccggatcttgcatattttatgcattgtccataccaactgagctaa 185269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 38130951 - 38131025
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| |||||||||||| ||| ||| ||||||    
T  38130951 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagttaagctcacaagga 38131025  T

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Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 25340916 - 25340979
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  25340916 ggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 25340979  T

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Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 25441492 - 25441555
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| | |||||||||| ||||||| |||||| ||||||||||||||||    
T  25441492 ggtggccggggtttgaaccccagaccttgcatatattatgcattgtccataccaactgagctaa 25441555  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 48849755 - 48849826
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaag 287  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| |||||||||||| ||| ||| ||||    
T  48849755 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtc-ataccaactgagttaagctcacaag 48849826  T

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Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 4601913 - 4601854
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| | ||||||||||    
T  4601913 ggtggccggggtttgaaccccggaccttgcatttattatgcattgtccaaaccaactgag 4601854  T

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Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 14827594 - 14827531
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||| ||||||| | ||||| |||||| ||||||||||||||||    
T  14827594 ggtggccggggtttaaaccccggatcttgcatattttatgcattgtccataccaactgagctaa 14827531  T

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Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 24428473 - 24428528
Alignment:
Q  223 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| |||||||||| |||||| ||||||| |||||| ||||||||||||||||    
T  24428473 gggtttgaacctcggactttgcatatattatgcattgtccataccaactgagctaa 24428528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 29631255 - 29631192
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| || | || ||||||||| ||||||| |||||| ||||||||||||||||    
T  29631255 ggtggccggggtttgaatcccgaaccttgcatatattatgcattgtccataccaactgagctaa 29631192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 35863805 - 35863868
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| | |||||||||| ||||||||||||||  |||||||||||||||    
T  35863805 ggtggccgaggtttgaaccccagaccttgcatatattatgtattgtccttaccaactgagctaa 35863868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 45432017 - 45431954
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||||| |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  45432017 ggtggccagggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 45431954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 45885469 - 45885532
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||||| |||||||||| ||||||| |  ||| ||||||||||||||||    
T  45885469 ggtggccggggtttgaacctcagaccttgcatatattatgcaaggtccataccaactgagctaa 45885532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 53996368 - 53996294
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||| ||  |||| | |||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  53996368 ggtggccgggattcgaaccccagaccttgcatatattatgcattgtccataccaactgagctaagctcacaagga 53996294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 977953 - 977996
Alignment:
Q  235 cggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||    
T  977953 cggaccttgcatatattatgcattgtccataccaactgagctaa 977996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 2662161 - 2662098
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| |||| ||| ||| ||||||||| ||||||| ||||||  |||||||||||||||    
T  2662161 ggtggccggagtttaaacttcgaaccttgcatatattatgcattgtctttaccaactgagctaa 2662098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 11358303 - 11358240
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||| ||||||| ||||||| ||||||  ||||||| |||||||    
T  11358303 ggtggccggggtttgaaccccggatcttgcatatattatgaattgtcgctaccaaccgagctaa 11358240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 16663236 - 16663295
Alignment:
Q  223 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctc 282  Q
    |||||| |||| |||||||||||| ||||||| ||| || |||||||||||| |||||||    
T  16663236 gggtttgaaccccggaccttgcatatattatgcattatccataccaactgagataatctc 16663295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 16792966 - 16793029
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| ||||||||| ||||  ||||||||||| ||||||| |||||| |||||||||| |||||    
T  16792966 ggtgaccggggtttgaaccctggaccttgcatatattatgcattgtctataccaactgtgctaa 16793029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 21914847 - 21914890
Alignment:
Q  235 cggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||||  |||||||||||||| |||||||||||||||    
T  21914847 cggaccttgcatacattatgtattgtcattaccaactgagctaa 21914890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 22722471 - 22722408
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||| ||||||||||||||||| | ||||| |||||  |||| |||||||||||    
T  22722471 ggtggtcggggtttgaacctcggaccttgcatattttatgcattgttcatactaactgagctaa 22722408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 27185546 - 27185483
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| || ||||| |||| | |||||||||| ||||||||||||||  |||||||||||||||    
T  27185546 ggtggtcgaggtttgaaccccagaccttgcatatattatgtattgtccctaccaactgagctaa 27185483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 32843254 - 32843317
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| | |||||||||| | ||||| |||||| | ||||||||||||||    
T  32843254 ggtggccggggtttgaaccccagaccttgcatattttatgcattgtccaaaccaactgagctaa 32843317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 34899166 - 34899103
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||| |||| |||||||||||| ||||||| ||||||  ||| |||||||||||    
T  34899166 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccctacgaactgagctaa 34899103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 51882192 - 51882251
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||||||||| ||||  ||| ||||||| ||||||| |||||| ||||||||||||    
T  51882192 ggtggccggggtttgaaccctggatcttgcatatattatgcattgtccataccaactgag 51882251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 52119445 - 52119382
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||  |||| || ||||||||| ||||||| ||||||  |||||||||||||||    
T  52119445 ggtggccggggttcgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaa 52119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 8075854 - 8075808
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtc 261  Q
    |||||||||||||| |||||| |||||||||| ||||||| ||||||    
T  8075854 ggtggccggggtttgaacctcagaccttgcatatattatgcattgtc 8075808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 22799718 - 22799780
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    ||||| || ||||| ||||||||||||||||||| ||||| ||||||  ||| ||||||||||    
T  22799718 ggtggtcgaggtttgaacctcggaccttgcatgttttatgcattgtccttacaaactgagcta 22799780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Original strand, 38034802 - 38034864
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| ||||| |||| |||||||||||| | ||||||||||||   ||||||||||||||    
T  38034802 gtggccgaggtttgaaccccggaccttgcatattttatgtattgtcccaaccaactgagctaa 38034864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 42398001 - 42398039
Alignment:
Q  235 cggaccttgcatgtattatgtattgtcaataccaactga 273  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  42398001 cggaccttgcatatattatgcattgtcaataccaactga 42398039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 43345020 - 43345062
Alignment:
Q  236 ggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||| |||||||||||||  ||||||||||||||||    
T  43345020 ggaccttgcatatattatgtattgttcataccaactgagctaa 43345062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 44579700 - 44579642
Alignment:
Q  220 ccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||  |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  44579700 ccggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 44579642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 2186425 - 2186478
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||| |||| | |||||| ||| |||||||||||||| ||||||||||||    
T  2186425 cggggtttgaaccccagaccttacatatattatgtattgtccataccaactgag 2186478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 10498709 - 10498750
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  10498709 gaccttgcatatattatgcattgtccataccaactgagctaa 10498750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 11969657 - 11969702
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagc 275  Q
    ||||||||||||||||||||||||| ||| ||  ||||||||||||    
T  11969657 aacctcggaccttgcatgtattatgcattttccttaccaactgagc 11969702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 17507714 - 17507755
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgagctaat 279  Q
    ||||||||| ||||||| |||||||||| |||||||||||||    
T  17507714 accttgcatatattatgcattgtcaatatcaactgagctaat 17507755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 23147976 - 23148033
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||  |||| ||||||| |||| ||||||||||||||  |||||||||||||||    
T  23147976 cggggttcgaaccccggacctcgcatatattatgtattgtccttaccaactgagctaa 23148033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 334839 - 334899
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgta-ttgtcaataccaactgag 274  Q
    |||||||||||||| |||| |||||||||||| | ||||| | ||||| ||||||||||||    
T  334839 ggtggccggggtttgaaccccggaccttgcatattttatgcatttgtccataccaactgag 334899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 8136624 - 8136684
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagc 275  Q
    ||||| |||||||| ||||| ||||||||||| ||||||| || ||| |||||||| ||||    
T  8136624 ggtggtcggggtttgaaccttggaccttgcatatattatgcatcgtccataccaaccgagc 8136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 19468505 - 19468461
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||| |||||||||||| ||||||| |||||| ||||||||||||    
T  19468505 aaccacggaccttgcatatattatgcattgtccataccaactgag 19468461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 20400139 - 20400083
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||||| |||||||||| ||||||||||||||  |  ||||||||||||    
T  20400139 ggggtttgaacctcagaccttgcatatattatgtattgtctctgtcaactgagctaa 20400083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 21506753 - 21506813
Alignment:
Q  218 ggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||  |||| | |||||||||| | ||||| |||||| ||||||||||||||||    
T  21506753 ggccggggttcaaaccccagaccttgcatattttatgcattgtccataccaactgagctaa 21506813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 32629134 - 32629086
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  32629134 aaccccggaccttgcatattttatgcattgtccataccaactgagctaa 32629086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 35392049 - 35392009
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| ||| ||||||||||||||| |||||||||||||||    
T  35392049 accttacatatattatgtattgtcattaccaactgagctaa 35392009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 39100075 - 39100139
Alignment:
Q  215 ggtggccggggtttcaacc-tcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| ||||||||||||| ||||||| |||||  ||| ||||||||||||    
T  39100075 ggtggccgaggtttgaaccatcggaccttgcatatattatgcattgtttataacaactgagctaa 39100139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 43011368 - 43011332
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  43011368 accttgcatgtattatgtattgtctatatcaactgag 43011332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 50570204 - 50570244
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| ||||||| |||||| ||||||||||||||||    
T  50570204 accttgcatatattatgcattgtctataccaactgagctaa 50570244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 55126068 - 55126012
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| ||||||| ||||||||| ||||||||||||||   | ||||||||||||    
T  55126068 ggggtttgaacctcgaaccttgcatatattatgtattgtcctcatcaactgagctaa 55126012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 655742 - 655815
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    ||||||||||||  |||| |||||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  655742 gtggccggggttcgaaccccggaccttgcatatattatgcattgtcgataccaactgagctaagctcacaagga 655815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 26400933 - 26400870
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||  |||| |||||||||||| |||||||||||||| ||||||| ||||||||    
T  26400933 ggtggccggggttcaaaccccggaccttgcatatattatgtattgtccataccaattgagctaa 26400870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 14296949 - 14297023
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||||||| |||| |||||||| ||| | |||||||||||| ||||||||| |||||| ||| ||||||    
T  14296949 ggtggccggggtttgaaccccggaccttacatattttatgtattgtccataccaactcagctaagctcacaagga 14297023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 8569778 - 8569719
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| ||||||| ||||    
T  8569778 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaattgag 8569719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 17151305 - 17151242
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| | |||||||||| ||||||||||||||| |||||||| ||||||    
T  17151305 ggtggccgaggtttgaaccccagaccttgcatatattatgtattgtcactaccaacttagctaa 17151242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 29740551 - 29740488
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||| | ||||||| |||||| ||||||| ||||||||    
T  29740551 ggtggccggggtttgaaccccggaccttgcgtatattatgcattgtccataccaattgagctaa 29740488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 32053857 - 32053794
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| |||| |||| || ||||||||| ||||||| |||||| ||||||||||||||||    
T  32053857 ggtggccggagtttgaaccacgaaccttgcatatattatgcattgtccataccaactgagctaa 32053794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 20744206 - 20744144
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||| |||| | |||||||||| ||||||| |||||| ||||||||||||||||    
T  20744206 gtggtcggggtttgaaccccagaccttgcatatattatgcattgtccataccaactgagctaa 20744144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 1918465 - 1918509
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||    
T  1918465 aacctcggaccttgcatatattatgcattgtctataccaactgag 1918509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 21599026 - 21598970
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaact 271  Q
    |||||||||||||| |||| || ||||||||| |||||||||||||  |||||||||    
T  21599026 ggtggccggggtttaaaccccgtaccttgcatatattatgtattgttcataccaact 21598970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 2726409 - 2726468
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||| ||||||||  |||| |||||||||||| ||||||| |||||| ||||||||||||    
T  2726409 ggtgaccggggttcgaaccccggaccttgcatatattatgcattgtccataccaactgag 2726468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 4455588 - 4455651
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||| |||| | |||||||||| |||||||  ||||| ||||||||||||||||    
T  4455588 ggtggtcggggtttgaaccccagaccttgcatatattatgccttgtccataccaactgagctaa 4455651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 5040825 - 5040888
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| |||| |||  |||||||||||| |||||||| |||||  |||||||||||||||    
T  5040825 ggtggccggagtttgaacaccggaccttgcatatattatgttttgtctttaccaactgagctaa 5040888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 7081654 - 7081709
Alignment:
Q  223 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||||  |||||||||| ||||||||||||||  || ||||||||||||    
T  7081654 gggtttcaaccttagaccttgcatatattatgtattgtctttatcaactgagctaa 7081709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 8637437 - 8637492
Alignment:
Q  223 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| ||||||||||||||||| ||||||| ||||||  |||||||||| ||||    
T  8637437 gggtttgaacctcggaccttgcatatattatgcattgtccctaccaactgaactaa 8637492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 13376381 - 13376318
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||||  |||| |||||| ||||||||||||| |||||| ||||||| ||||||||    
T  13376381 ggtggccagggttagaaccccggaccatgcatgtattatgcattgtccataccaattgagctaa 13376318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 18254113 - 18254156
Alignment:
Q  235 cggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||||||||| ||||||  |||||||||||||||    
T  18254113 cggaccttgcatgtattatgcattgtccttaccaactgagctaa 18254156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 21847263 - 21847200
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||  |||| || ||||||||| ||||||||||||||  |||||||||||||||    
T  21847263 ggtggccgggattcgaaccccgtaccttgcatatattatgtattgtccctaccaactgagctaa 21847200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 31971590 - 31971539
Alignment:
Q  223 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||| ||||||||||||||||| ||||||| ||||||  |||||||||||    
T  31971590 gggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgag 31971539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 33824950 - 33824887
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| |||||||||||| ||||||| ||||||  || ||||||||||||    
T  33824950 ggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccttatcaactgagctaa 33824887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 2473670 - 2473609
Alignment:
Q  217 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||| |||| |  ||||||||| ||||||||||||||  ||| |||||||||||    
T  2473670 tggccggggtttaaaccccataccttgcatatattatgtattgtccctactaactgagctaa 2473609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 8810687 - 8810646
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||||||||||||||  |||||||||||||||    
T  8810687 gaccttgcatatattatgtattgtctttaccaactgagctaa 8810646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 9392666 - 9392723
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||||||||||||||| ||||||| ||| |  ||| ||||||||||||    
T  9392666 cggggtttaaacctcggaccttgcatatattatgcatttttcataacaactgagctaa 9392723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 15187132 - 15187087
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgt 260  Q
    ||||| |||||||| ||||||||||||||||| ||||||| |||||    
T  15187132 ggtggtcggggtttgaacctcggaccttgcatatattatgcattgt 15187087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Original strand, 15473474 - 15473519
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgt 260  Q
    ||||| |||||||| ||||||||||||||||| ||||||| |||||    
T  15473474 ggtggtcggggtttgaacctcggaccttgcatatattatgcattgt 15473519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 34828376 - 34828312
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgt-attatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||  |||||| |||||| ||| | |||||| |||||| ||||||||||||||||    
T  34828376 ggtggccggggttcgaacctcagaccttacatattattatgcattgtccataccaactgagctaa 34828312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 17800 - 17738
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| ||||||| |||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  17800 ggtggctggggtttgaacc-cggaccttgcatgtattatgcattgtccataccaactgagctaa 17738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 32051524 - 32051587
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| | ||||||||||||||    
T  32051524 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccaaaccaactgagctaa 32051587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 12800892 - 12800950
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactga 273  Q
    ||||| |||||||| |||| |||||||||||| |||||||||||||| |||||||||||    
T  12800892 ggtggtcggggtttgaaccccggaccttgcatatattatgtattgtccataccaactga 12800950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 12748970 - 12748913
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactg 272  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| ||||||||||    
T  12748970 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactg 12748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 13286201 - 13286137
Alignment:
Q  213 gcggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||||| |||| |||| ||||||| ||||||| |||||| ||||||||||||||||    
T  13286201 gcggtggccggggtttgaacc-cggatcttgcatatattatgcattgtctataccaactgagctaa 13286137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 8717467 - 8717543
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggata 291  Q
    |||||||| ||||| |||| || ||||||||| ||||||| |||||| |||||||||||||||| ||| | ||||||    
T  8717467 ggtggccgaggtttgaaccccgaaccttgcatatattatgcattgtccataccaactgagctaaactcacgaggata 8717543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 12910820 - 12910872
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||| ||||||    
T  12910820 gaccttgcatatattatgcattgtccataccaactgagctaatctcacaagga 12910872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 36781479 - 36781415
Alignment:
Q  213 gcggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    ||||||| |||||||| |||| ||||| |||||| ||||||||||||||  ||||||||||||||    
T  36781479 gcggtggtcggggtttaaaccccggactttgcatatattatgtattgtccttaccaactgagcta 36781415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 444482 - 444419
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||||| ||||||| ||||||  |||||| ||||||||    
T  444482 ggtggccggggtttaaaccccggaccttgcatatattatgcattgtccttaccaattgagctaa 444419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 11709055 - 11708992
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||| ||| ||||||||||||| ||||||| ||||||  |||||||||||||||    
T  11709055 ggtggtcggggtttgaacttcggaccttgcatatattatgcattgtccctaccaactgagctaa 11708992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 13357433 - 13357492
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||| ||||| ||||||| ||||||||| ||||||| |||||| ||||||||||||    
T  13357433 ggtggccgaggtttgaacctcgtaccttgcatatattatgcattgtccataccaactgag 13357492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 19163528 - 19163591
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||| |||| ||||||||||||  |||||| |||||| ||||||||||||||||    
T  19163528 ggtggtcggggtttgaaccccggaccttgcataaattatgcattgtccataccaactgagctaa 19163591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 27587290 - 27587227
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||||| ||| ||| ||||||  |||||||||||||||    
T  27587290 ggtggccggggtttgaaccccggaccttgcatatatcatgcattgtccttaccaactgagctaa 27587227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 6235543 - 6235617
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||||||| || | |||||||| ||| ||||||| || ||| |||||||||||||||| ||| ||||||    
T  6235543 ggtggccggggtttgaatcccggaccttacatatattatgcatcgtccataccaactgagctaaactcacaagga 6235617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 7997009 - 7996935
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    ||||| |||||||| |||| | |||||||||| |||||||  ||||| |||||||||||||||| ||| ||||||    
T  7997009 ggtggtcggggtttgaaccccagaccttgcatatattatgcgttgtccataccaactgagctaagctcacaagga 7996935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 25136836 - 25136898
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    |||||||| ||||| ||||||||||||||||| | |||||  ||||| |||||||||||||||    
T  25136836 ggtggccgaggtttgaacctcggaccttgcatattttatgccttgtccataccaactgagcta 25136898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 42208470 - 42208524
Alignment:
Q  224 ggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| ||||||||||||||||| ||||||| ||||||  |||||||||||||||    
T  42208470 ggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgagctaa 42208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 32421630 - 32421566
Alignment:
Q  223 gggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaag 287  Q
    |||||| |||| |||||||||||| |||||| ||||||| |||||||||||| ||| ||| ||||    
T  32421630 gggtttgaaccccggaccttgcatatattatatattgtccataccaactgagttaagctcacaag 32421566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 43962035 - 43962079
Alignment:
Q  234 tcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||    
T  43962035 tcggaccttgcatatattatgtattgtccttaccaactgagctaa 43962079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 15001267 - 15001326
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||||||||| ||||| ||||||||||| | ||||| |||||| | ||||||||||    
T  15001267 ggtggccggggtttgaaccttggaccttgcatattttatgcattgtcgaaaccaactgag 15001326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 17898148 - 17898089
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||||||||  || | |||||||||||| |||||||| ||||| ||||||||||||    
T  17898148 ggtggccggggttagaatcccggaccttgcatatattatgttttgtccataccaactgag 17898089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 32944832 - 32944891
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    ||||| |||||||| |||||| |||||||||| | ||||| |||||| ||||||||||||    
T  32944832 ggtggtcggggtttgaacctcagaccttgcatattttatgcattgtccataccaactgag 32944891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 40679721 - 40679784
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| |||||||||||| | |||| ||||| | ||||||||||||||||    
T  40679721 ggtggccgaggtttgaaccccggaccttgcatattttatatattgaccataccaactgagctaa 40679784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 24838162 - 24838224
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    |||||||||||||| |||| |||||||||||| | ||||| ||||||   |||||||||||||    
T  24838162 ggtggccggggtttgaaccccggaccttgcatattttatgcattgtcctaaccaactgagcta 24838224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 30427779 - 30427737
Alignment:
Q  236 ggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||    
T  30427779 ggaccttgcatatattatgcattgtccataccaactgagctaa 30427737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 37141426 - 37141368
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactga 273  Q
    ||||||||| |||| |||| || ||||||||| ||||||| |||||| |||||||||||    
T  37141426 ggtggccggagtttgaaccccgaaccttgcatatattatgcattgtccataccaactga 37141368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 11771758 - 11771713
Alignment:
Q  233 ctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| ||||||||||||||  || ||||||||||||    
T  11771758 ctcggaccttgcatatattatgtattgtctctatcaactgagctaa 11771713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 24195308 - 24195255
Alignment:
Q  225 gtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||| |||||||||||| |||||||||||||  ||| ||||||||||||    
T  24195308 gtttgaaccccggaccttgcatatattatgtattgttcatatcaactgagctaa 24195255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 37938558 - 37938501
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| ||| |||||||||| |||||| ||||||| ||| || ||||||||||||||||    
T  37938558 cgggatttgaacctcggactttgcatatattatgcattatccataccaactgagctaa 37938501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 2554226 - 2554278
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||| | |||||||||||| ||| |||||||||||| ||| ||||||    
T  2554226 gaccttgcatattttatgtattgtccatatcaactgagctaagctcacaagga 2554278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 9656004 - 9656052
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||||||||| | ||||| ||||||  |||||||||||||||    
T  9656004 aacctcggaccttgcatattttatgcattgtccttaccaactgagctaa 9656052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 291
Target Start/End: Complemental strand, 17704082 - 17704006
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggata 291  Q
    |||||||| ||||| || | | |||||||||| ||||||| ||||||  ||||||||||||||| ||| | ||||||    
T  17704082 ggtggccgaggtttgaatcacagaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggata 17704006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 19778119 - 19778071
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  19778119 aaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 19778071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 23852965 - 23852917
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||||||| ||||||| |||||| ||||| ||||||||||    
T  23852965 aaccacggaccttgcatatattatgcattgtccataccgactgagctaa 23852917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 39821950 - 39821890
Alignment:
Q  218 ggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||| |||| | |||||||||| ||||||| ||||||  |||||||||||||||    
T  39821950 ggcctgggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaa 39821890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 40795431 - 40795387
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||| |||||||||||| |||||||||||||  ||||||||||||    
T  40795431 aaccccggaccttgcatatattatgtattgttcataccaactgag 40795387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 22522793 - 22522856
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| |||||||| |||||||    
T  22522793 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaaccgagctaa 22522856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 16133059 - 16133120
Alignment:
Q  217 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||| |||||| |||||||||| ||||||| ||||||  |||||||||||||||    
T  16133059 tggccggggtttaaacctctgaccttgcatatattatgcattgtccttaccaactgagctaa 16133120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 20721113 - 20721060
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||| |||| |||||||||||| |||||||||||||| ||||||||||||    
T  20721113 cggggtttgaaccccggaccttgcatatattatgtattgtccataccaactgag 20721060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 20927693 - 20927632
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggata 291  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||| ||| ||| ||||    
T  20927693 aacctcggatcttgcatatattatgtattgtccataccaactgagctaagctcacaaagata 20927632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 6489076 - 6489013
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| | |||||||||| ||||||| ||||||  |||||||||||||||    
T  6489076 ggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaa 6489013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 6624845 - 6624782
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||  |||| |||||||||||| ||||||| |||||| || |||||||||||||    
T  6624845 ggtggccggggttcgaaccccggaccttgcatatattatgcattgtccatgccaactgagctaa 6624782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 13864413 - 13864354
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    ||||| |||||||| |||| |||||||||||| |||||||||||||  ||||||||||||    
T  13864413 ggtggtcggggtttgaaccccggaccttgcatatattatgtattgttcataccaactgag 13864354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 17090935 - 17090872
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| ||||||||||||  |||||| ||| || ||||||||||||||||    
T  17090935 ggtggccggggtttgaaccccggaccttgcattaattatgcattatccataccaactgagctaa 17090872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 28207201 - 28207138
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||  ||||||||||||||||| | ||||| |||||| ||||||||||||||||    
T  28207201 ggtggccgggattcgaacctcggaccttgcatattttatgcattgtccataccaactgagctaa 28207138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 37932399 - 37932336
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||||  |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  37932399 ggtggccagggttcgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 37932336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 40715941 - 40716004
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| ||| ||| ||||||||    
T  40715941 ggtggccggggtttgaaccccggaccttgcatatattatgcattgtccatatcaattgagctaa 40716004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 18331776 - 18331702
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    ||||||||||| || |||| |||||||||||| | ||||| |||||| ||||||| |||||||| ||| ||||||    
T  18331776 ggtggccggggcttgaaccccggaccttgcatattttatgcattgtccataccaagtgagctaagctcacaagga 18331702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 10704324 - 10704397
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||  |||| |||| |||||||||||| | ||||| |||||| |||||||||||||||| ||| ||||||    
T  10704324 gtggccgtagtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacaagga 10704397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 26655533 - 26655472
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagct 276  Q
    |||||||||||||  |||| |||||||| ||| ||||||| |||||| ||||||||||||||    
T  26655533 ggtggccggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagct 26655472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 26927118 - 26927057
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagct 276  Q
    |||||||||||||  |||| |||||||| ||| ||||||| |||||| ||||||||||||||    
T  26927118 ggtggccggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagct 26927057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 18489090 - 18489142
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  18489090 gaccttgcatatattatgcattgtctataccaactgagctaaactcacaagga 18489142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 35109454 - 35109410
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  35109454 aacctcggaccttgcatatattatgtattgtctttaccaactgag 35109410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 3445239 - 3445302
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||| |||| ||||||||||||  |||||| ||||||  |||||||||||||||    
T  3445239 ggtggccgggatttgaaccccggaccttgcatacattatgcattgtccttaccaactgagctaa 3445302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 16036896 - 16036833
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| | |||| ||||  ||||||||||| |||||||||||||| || |||||||||||||    
T  16036896 ggtggccagagtttgaaccatggaccttgcatatattatgtattgtccatgccaactgagctaa 16036833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 26409322 - 26409259
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||  |||| |||||||| ||| ||||||| |||||| ||||||||||||||||    
T  26409322 ggtgggcggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagctaa 26409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 34436920 - 34436857
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||| |||| ||| |||||||| ||||||| ||||||  |||||||||||||||    
T  34436920 ggtgggcggggtttgaaccccggcccttgcatatattatgcattgtccctaccaactgagctaa 34436857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 11720962 - 11720889
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||||||| |||| || ||||||||| ||||||| ||||||  ||||||||||| ||| ||| ||||||    
T  11720962 ggtggccggggtttgaaccccg-accttgcatatattatgcattgtccctaccaactgagttaagctcacaagga 11720889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 12190055 - 12189985
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaaggata 291  Q
    |||||||| |||| | |||||| ||| |||||||||||||| ||||||||| ||||||  || ||||||||    
T  12190055 cggggtttgaacccccgaccttacatatattatgtattgtccataccaactaagctaagttcacaaggata 12189985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 23036699 - 23036761
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    |||||| | ||||| ||||||  ||||||||| |||||||| ||||| |||||||||||||||    
T  23036699 ggtggctgaggtttgaacctctaaccttgcatatattatgttttgtccataccaactgagcta 23036761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 34191501 - 34191439
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||||| |||| |||||||||||| | ||||| ||||||   ||||||||||||||    
T  34191501 gtggccggggtttgaaccccggaccttgcatattttatgcattgtcccaaccaactgagctaa 34191439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 274
Target Start/End: Original strand, 40837896 - 40837954
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||| |||||||| |||| |||||||||||| | |||| ||||||| ||||||||||||    
T  40837896 gtggtcggggtttgaaccccggaccttgcatattttatatattgtccataccaactgag 40837954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 31602823 - 31602880
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| || |||| ||||||||| ||||||| |||||  ||||||||||||||||    
T  31602823 cggggtttgaatctcgaaccttgcatatattatgcattgttcataccaactgagctaa 31602880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 41650949 - 41650990
Alignment:
Q  233 ctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||||||||| ||||||| |||||| ||||||||||||    
T  41650949 ctcggaccttgcatatattatgcattgtccataccaactgag 41650990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 4009936 - 4009872
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtatt-atgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| ||| |||||||| |||| ||| ||||||  |||||||||||||||    
T  4009936 ggtggccggggtttgaaccccggcccttgcatatattaatgcattgtccttaccaactgagctaa 4009872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 18391654 - 18391606
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||||||||| | ||||| ||||||  |||||||||||||||    
T  18391654 aacctcggaccttgcatattttatgcattgtccttaccaactgagctaa 18391606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 18789105 - 18789041
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaat 279  Q
    |||||| ||||||| |||| || ||||||||| | ||||| ||||||  ||||||||||||||||    
T  18789105 ggtggctggggtttgaaccccgaaccttgcatattttatgcattgtctctaccaactgagctaat 18789041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 24636639 - 24636703
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcat-gtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| ||||||| |||||||||||||||||  | ||||| |||||| |||| |||||||||||    
T  24636639 ggtggctggggtttgaacctcggaccttgcatatttttatgcattgtccatactaactgagctaa 24636703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 39938821 - 39938781
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtc 261  Q
    |||||||| ||| ||||||||||||| ||||||||||||||    
T  39938821 cggggtttaaacttcggaccttgcatatattatgtattgtc 39938781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 42505918 - 42505878
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| ||||||| |||||| ||||||||||||||||    
T  42505918 accttgcatatattatgcattgtccataccaactgagctaa 42505878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 8269360 - 8269423
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||| |||| |||||||||||| ||||||||||||||  |||||||||||||||    
T  8269360 ggtggtcggggtttgaaccccggaccttgcatatattatgtattgtccttaccaactgagctaa 8269423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 34521182 - 34521245
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| ||||| |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  34521182 ggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 34521245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 25533038 - 25532979
Alignment:
Q  219 gccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| |||| |||||||||||| ||||||| |||||| ||||||||||| ||||    
T  25533038 gccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgaactaa 25532979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 34632238 - 34632175
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||| ||||||||| ||||||| ||||||  |||||| ||||||||||||||||    
T  34632238 ggtggccgggatttgaacctcggatcttgcatatattatacattgtctataccaactgagctaa 34632175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 42045364 - 42045427
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||  | |||||||||| ||||||| |||||| ||||||||||||||||    
T  42045364 ggtggccggggtttgaactccagaccttgcatatattatgcattgtccataccaactgagctaa 42045427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 45139998 - 45140061
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||   ||||||||||| ||||||| |||||| ||||||||||||||||    
T  45139998 ggtggccggggtttaaactctggaccttgcatatattatgcattgtccataccaactgagctaa 45140061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 52441503 - 52441566
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||  |||  |||||||||||| ||||||| |||||| ||||||||||||||||    
T  52441503 ggtggccggggttcaaacgccggaccttgcatatattatgcattgtctataccaactgagctaa 52441566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 18166670 - 18166608
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||| |||| ||||| |||||| ||||||| |||||| ||||||||||||||||    
T  18166670 gtggtcggggtttgaaccccggactttgcatatattatgcattgtctataccaactgagctaa 18166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 39303014 - 39302952
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    |||||||||||||| |||| | |||||||||| | ||||||||||||  ||||||||||||||    
T  39303014 ggtggccggggtttgaaccaccgaccttgcatattttatgtattgtccttaccaactgagcta 39302952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 13615610 - 13615666
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    |||||||  ||||| ||||||||||||||||||| ||||||  ||||||||||||||    
T  13615610 cggggttcgaaccttggaccttgcatgtattatgcattgtccttaccaactgagcta 13615666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 19620630 - 19620582
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||||||| ||||||||||||||  |||||||||||||||    
T  19620630 aaccccggaccttgcatatattatgtattgtccttaccaactgagctaa 19620582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 26803450 - 26803506
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||| ||||| |||||| ||||||| |||||| ||||||||||||||||    
T  26803450 ggggtttgaaccccggactttgcatatattatgcattgtccataccaactgagctaa 26803506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 33153878 - 33153946
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||| ||||||||||||| ||| ||||||| ||||||  ||||||||||| ||| ||| ||||||    
T  33153878 cggggtttgaacctcggaccttacatatattatgcattgtccctaccaactgagttaagctcacaagga 33153946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 3509953 - 3509996
Alignment:
Q  235 cggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||    
T  3509953 cggaccttgcatatattatgcattgtccataccaactgagctaa 3509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 6000135 - 6000194
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||| ||||||||| ||||||||||||||||| ||||||| ||||||   ||||||||||    
T  6000135 ggtgtccggggtttgaacctcggaccttgcatatattatgcattgtcctaaccaactgag 6000194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 8736504 - 8736449
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaac 270  Q
    |||||||||||||| |||| |||||||||||| | ||||| |||||| ||||||||    
T  8736504 ggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaac 8736449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 9265828 - 9265887
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||||||||||| || | | |||||||||||||||||  |||||| ||||||||||||    
T  9265828 ggtggccggggtttgaatcccagaccttgcatgtattatacattgtccataccaactgag 9265887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 17139509 - 17139572
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| |||||||| |||| ||||||||| || ||||||| ||||||  |||||||||||||||    
T  17139509 ggtggtcggggtttgaaccccggaccttgaatatattatgcattgtccctaccaactgagctaa 17139572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 27172714 - 27172773
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||||| ||||||| ||||| ||| ||||||| |||||||| ||||| ||||||||||||    
T  27172714 ggtggcaggggtttgaaccttggagcttgcatatattatgttttgtccataccaactgag 27172773  T

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Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 41884797 - 41884860
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||  |||| ||||||||| || |||||||||||||| | || |||||||||||    
T  41884797 ggtggccggggttcgaaccccggaccttgtatatattatgtattgtccaaactaactgagctaa 41884860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 42888644 - 42888581
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| ||||||  |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  42888644 ggtggcgggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 42888581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 47528439 - 47528502
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| ||||||||  ||||||||||||||| | ||||||| ||||||  |||||||||||||||    
T  47528439 ggtgtccggggttcgaacctcggaccttgcgtatattatgcattgtccttaccaactgagctaa 47528502  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Original strand, 41763148 - 41763210
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||||| |||| |||||||||||| | ||||| ||| ||  |||||||||||||||    
T  41763148 gtggccggggtttgaaccccggaccttgcatattttatgcattatccctaccaactgagctaa 41763210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 26755683 - 26755622
Alignment:
Q  217 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| ||||| |||| |||||||||||| ||| ||| |||||| ||| ||||||||||||    
T  26755683 tggccgaggtttgaaccccggaccttgcatatataatgcattgtccatatcaactgagctaa 26755622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 40680547 - 40680490
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| |||| |||||||||||| | |||| |||||||| |||||||| ||||||    
T  40680547 cggggttttaaccccggaccttgcatattttatatattgtcattaccaactaagctaa 40680490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 43611487 - 43611430
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| |||| |  ||||| ||| |||||||||||||| ||||||||||||||||    
T  43611487 cggggtttgaaccccataccttacatatattatgtattgtccataccaactgagctaa 43611430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 49183220 - 49183179
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||||||||||||||  |||||||||||||||    
T  49183220 gaccttgcatatattatgtattgtccttaccaactgagctaa 49183179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 3481630 - 3481566
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgta-ttgtcaataccaactgagctaa 278  Q
    |||||||||||||| |||| | |||||||||| ||||||| | |||||  |||||||||||||||    
T  3481630 ggtggccggggtttgaaccccagaccttgcatatattatgcatttgtccctaccaactgagctaa 3481566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 8253785 - 8253745
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| ||||||| |||||| ||||||||||||||||    
T  8253785 accttgcatatattatgcattgtccataccaactgagctaa 8253745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 13094098 - 13094032
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattat---gtattgtcaataccaactgagctaa 278  Q
    |||||||||||||| || |||| ||||||||| ||||||   | |||||||||||||| ||||||||    
T  13094098 ggtggccggggtttgaatctcgaaccttgcatatattattatgcattgtcaataccaagtgagctaa 13094032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 17651372 - 17651428
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaact 271  Q
    ||||||| |||||| |||||| |||||||||| | |||||||||||| ||| |||||    
T  17651372 ggtggccagggtttgaacctcagaccttgcatattttatgtattgtccatatcaact 17651428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 24752639 - 24752703
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgt-attatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||||  |||| | |||||||||| | |||||| |||||| ||||||||||||||||    
T  24752639 ggtggccggggttcgaaccccagaccttgcatattattatgcattgtccataccaactgagctaa 24752703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 25086530 - 25086478
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    |||||||||| | ||||| |||||| |||||||||||||||| ||| ||||||    
T  25086530 gaccttgcatattttatgcattgtccataccaactgagctaagctcacaagga 25086478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 28016189 - 28016245
Alignment:
Q  222 ggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||| |||| |||| ||||||| | |||||||||||| || |||||||||||||    
T  28016189 ggggtttgaaccccggatcttgcatattttatgtattgtccatcccaactgagctaa 28016245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 28832163 - 28832235
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaag 287  Q
    ||||| |||| ||| |||||| |||||||||| ||||||| |||||  |||||||||||| ||| ||| ||||    
T  28832163 ggtggtcgggatttgaacctcagaccttgcatatattatgcattgttcataccaactgagttaagctcacaag 28832235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 34142379 - 34142419
Alignment:
Q  238 accttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||| |||||||||||||  ||||||||||||||||    
T  34142379 accttgcatatattatgtattgtgcataccaactgagctaa 34142419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 38448873 - 38448921
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||||||| ||||||| ||||||  |||||||||||||||    
T  38448873 aaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 38448921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 39252148 - 39252192
Alignment:
Q  225 gtttcaacctcggaccttgcatgtattatgtattgtcaataccaa 269  Q
    |||| |||| |||||||||||| |||||||||||||| |||||||    
T  39252148 gtttgaaccccggaccttgcatatattatgtattgtcgataccaa 39252192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 47961296 - 47961344
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||||||||||||||| ||||||| ||||||  | |||||||||||||    
T  47961296 aacctcggaccttgcatatattatgcattgtctctgccaactgagctaa 47961344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 52494126 - 52494062
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcat-gtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| ||||||| |||||||||||||||||  | ||||| |||||| |||| |||||||||||    
T  52494126 ggtggctggggtttgaacctcggaccttgcatatttttatgcattgtccatactaactgagctaa 52494062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 1597 - 1534
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||| ||||||  |||| |||||||||||| | ||||| |||||| ||||||||||||||||    
T  1597 ggtggcgggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 1534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 40058 - 40004
Alignment:
Q  224 ggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    ||||| ||||||  ||||||||| ||||||| |||||| ||||||||||||||||    
T  40058 ggtttgaacctctaaccttgcatatattatgcattgtccataccaactgagctaa 40004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 45466 - 45422
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgag 274  Q
    |||| |||||||||||| |||||||||||||| | ||||||||||    
T  45466 aaccccggaccttgcatatattatgtattgtccaaaccaactgag 45422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 161210 - 161136
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    ||||| |||||||| |||| || ||||||||| | ||||| |||||| |||||||||||| ||| ||| ||||||    
T  161210 ggtggtcggggtttgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcacaagga 161136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 3308 - 3369
Alignment:
Q  216 gtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagcta 277  Q
    ||||||| ||||| |||| || ||||||||| |||||||| |||||  ||||||||||||||    
T  3308 gtggccgaggtttgaaccccgaaccttgcatatattatgtcttgtccttaccaactgagcta 3369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 3188 - 3147
Alignment:
Q  237 gaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||| ||||||||||||||  |||||||||||||||    
T  3188 gaccttgcatatattatgtattgtctttaccaactgagctaa 3147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 31172 - 31221
Alignment:
Q  240 cttgcatgtattatgtattgtcaataccaactgagctaatctcccaagga 289  Q
    ||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  31172 cttgcatatattatgcattgtccataccaactgagctaaactcgcaagga 31221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 58916 - 58859
Alignment:
Q  221 cggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||| |||||||||||||| ||  |||||| ||| || ||||||||||||||||    
T  58916 cggggtttaaacctcggaccttgtatacattatgcattatccataccaactgagctaa 58859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 53784 - 53832
Alignment:
Q  230 aacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||| |||||||||||||||||||| | ||||  |||||||||||||||    
T  53784 aaccccggaccttgcatgtattatgcactgtccttaccaactgagctaa 53832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 75394 - 75333
Alignment:
Q  215 ggtggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagct 276  Q
    |||||||||| ||  |||| |||||||||||| ||||||| ||||||  |||||||||||||    
T  75394 ggtggccgggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgagct 75333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 239874 - 239813
Alignment:
Q  217 tggccggggtttcaacctcggaccttgcatgtattatgtattgtcaataccaactgagctaa 278  Q
    |||||||||||| |||  ||||| |||||| ||||||| ||||||  |||||||||||||||    
T  239874 tggccggggtttgaactccggactttgcatatattatgcattgtccttaccaactgagctaa 239813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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