View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16265_high_18 (Length: 365)
Name: NF16265_high_18
Description: NF16265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16265_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 92 - 357
Target Start/End: Original strand, 683258 - 683523
Alignment:
| Q |
92 |
aaaactctcgagaagcgtgttaactaagtttctatttctatataagatatatctcattttcaaatcaacattatcatcaatttatatttctattttcctt |
191 |
Q |
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||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |
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| T |
683258 |
aaaactctcaagaatcgtgttaactaagtttctatttctatataagatatatctcattttcaaatcaacattatcatcattttttatttctattttcctt |
683357 |
T |
|
| Q |
192 |
ctggtttctttatttgctttgtttcaacaagaaatggcattgatcgttaagttacttgtgttgttgttcgtctttctgtttttacagagtttgaagcatg |
291 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
683358 |
ctggtttctttattttctttgtttcaacaagaaatggcattgatcgttaagttacttgtgttgttgttcgtttttctgtttttacagagtttgaagcatg |
683457 |
T |
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| Q |
292 |
gaaaggggaatgattaatcacaaccctaagaaacgaaaactggtgctaaacgatgatgatgatgat |
357 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
683458 |
gaaaggggaatgattaatcacaaccctaagaaacgaaaactggtgctaaacgatgatgatgatgat |
683523 |
T |
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