View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16265_high_32 (Length: 269)
Name: NF16265_high_32
Description: NF16265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16265_high_32 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 41845484 - 41845247
Alignment:
| Q |
10 |
gaagcatagggccaaagatttcttctgtcattattgctgattcaagtgggggatctagtaatattgttggttccataaatctacataatattttagtcca |
109 |
Q |
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| T |
41845484 |
gaagcacagggccaaagatttcttctgtcattattgctgattcaagtgggggatctagtaatattgttggttccataaatctacgtaatattttagtcca |
41845385 |
T |
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| Q |
110 |
aataaaacggtgaggaaaatattgtatataatagtatattctcttatgtatgtttattaggagaagtgaaaataaaaacaacataacaatttttgaaagg |
209 |
Q |
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| T |
41845384 |
aataaaacggtgaggaaaatattttatataatagtatattctcttatgtatgtttattaggagaagtgaaaataaaaacaagataacaatttttaaaagg |
41845285 |
T |
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| Q |
210 |
gaaatgttatttatagcgaaaaagcatttcaagaagaa |
247 |
Q |
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| T |
41845284 |
gaaatgttatttatagcgaaaaagcatttcaagaagaa |
41845247 |
T |
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