View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16265_low_1 (Length: 1017)

Name: NF16265_low_1
Description: NF16265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16265_low_1
NF16265_low_1
[»] chr3 (42 HSPs)
chr3 (1-834)||(595889-596719)
chr3 (826-944)||(600684-600804)
chr3 (867-1006)||(53190759-53190903)
chr3 (866-1006)||(27899081-27899226)
chr3 (866-1009)||(21348722-21348870)
chr3 (867-1009)||(30599915-30600062)
chr3 (869-1009)||(43765139-43765284)
chr3 (864-999)||(54898434-54898574)
chr3 (864-1009)||(51684607-51684757)
chr3 (867-1006)||(2226152-2226296)
chr3 (881-1006)||(35905712-35905842)
chr3 (867-1006)||(46112487-46112631)
chr3 (867-1009)||(17515310-17515457)
chr3 (867-1009)||(23293167-23293314)
chr3 (867-1006)||(41977750-41977894)
chr3 (920-1009)||(42279562-42279654)
chr3 (919-1009)||(46197774-46197867)
chr3 (915-1009)||(48830803-48830900)
chr3 (867-1009)||(3152215-3152362)
chr3 (867-953)||(23291570-23291658)
chr3 (870-1006)||(2377032-2377173)
chr3 (867-944)||(48829356-48829435)
chr3 (861-953)||(53094274-53094368)
chr3 (866-944)||(46114115-46114196)
chr3 (867-953)||(611223-611311)
chr3 (867-953)||(38191895-38191983)
chr3 (867-953)||(38193511-38193599)
chr3 (867-953)||(41979353-41979441)
chr3 (867-953)||(46308807-46308895)
chr3 (864-904)||(27897148-27897188)
chr3 (867-944)||(51686404-51686483)
chr3 (892-953)||(54412548-54412611)
chr3 (956-1006)||(7884873-7884924)
chr3 (865-953)||(46609147-46609237)
chr3 (867-913)||(7884942-7884988)
chr3 (866-941)||(30598336-30598413)
chr3 (870-953)||(42282474-42282559)
chr3 (956-1009)||(44276193-44276247)
chr3 (866-1009)||(44794207-44794354)
chr3 (867-953)||(3150252-3150340)
chr3 (867-953)||(44795891-44795979)
chr3 (867-953)||(54900075-54900163)
[»] chr8 (25 HSPs)
chr8 (865-1006)||(8609787-8609933)
chr8 (867-1009)||(13282478-13282625)
chr8 (866-1006)||(38547227-38547372)
chr8 (867-1009)||(41042581-41042728)
chr8 (865-1009)||(26242311-26242460)
chr8 (867-1006)||(13108336-13108480)
chr8 (919-1009)||(41825641-41825734)
chr8 (867-953)||(42943427-42943515)
chr8 (870-1009)||(42941777-42941921)
chr8 (864-953)||(5038063-5038153)
chr8 (922-1009)||(13486096-13486186)
chr8 (919-1009)||(7745109-7745202)
chr8 (919-1009)||(9673162-9673255)
chr8 (919-1009)||(22272390-22272483)
chr8 (868-975)||(5036446-5036557)
chr8 (867-953)||(22273892-22273980)
chr8 (867-944)||(34681076-34681155)
chr8 (867-944)||(26238726-26238805)
chr8 (867-969)||(27691154-27691260)
chr8 (864-953)||(13106801-13106892)
chr8 (857-953)||(38548832-38548930)
chr8 (866-953)||(33762714-33762803)
chr8 (919-1009)||(40339677-40339770)
chr8 (867-953)||(601705-601793)
chr8 (867-953)||(27692838-27692926)
[»] chr1 (26 HSPs)
chr1 (863-1009)||(27087279-27087430)
chr1 (865-1006)||(31238475-31238621)
chr1 (865-1006)||(4855946-4856092)
chr1 (865-1006)||(25278348-25278494)
chr1 (866-1006)||(6818658-6818803)
chr1 (867-1006)||(34778118-34778262)
chr1 (867-1009)||(2869579-2869726)
chr1 (864-1009)||(51896129-51896279)
chr1 (919-1009)||(15104495-15104588)
chr1 (867-1006)||(37344342-37344486)
chr1 (864-953)||(31236816-31236907)
chr1 (866-1009)||(3013447-3013601)
chr1 (860-1005)||(50556078-50556228)
chr1 (870-953)||(3011858-3011943)
chr1 (866-953)||(25278989-25279078)
chr1 (866-941)||(37088149-37088226)
chr1 (866-1009)||(46583533-46583681)
chr1 (865-944)||(25278852-25278933)
chr1 (864-953)||(25276739-25276830)
chr1 (868-953)||(50554164-50554251)
chr1 (870-953)||(51894570-51894655)
chr1 (864-953)||(26223584-26223675)
chr1 (867-944)||(52641888-52641967)
chr1 (867-953)||(34776569-34776657)
chr1 (867-953)||(37345963-37346051)
chr1 (867-953)||(46582010-46582098)
[»] chr5 (20 HSPs)
chr5 (865-1006)||(17574316-17574462)
chr5 (867-1006)||(7267843-7267987)
chr5 (867-1009)||(36057590-36057737)
chr5 (867-1009)||(34327635-34327782)
chr5 (865-953)||(12738737-12738827)
chr5 (865-953)||(12801560-12801650)
chr5 (867-1006)||(2179787-2179931)
chr5 (921-1006)||(30468260-30468348)
chr5 (861-1005)||(8539669-8539818)
chr5 (919-1009)||(18624985-18625078)
chr5 (867-953)||(30463900-30463988)
chr5 (867-953)||(8541272-8541360)
chr5 (867-953)||(2852886-2852974)
chr5 (865-953)||(28813766-28813858)
chr5 (867-953)||(21842993-21843081)
chr5 (866-969)||(24541230-24541337)
chr5 (888-953)||(43492134-43492201)
chr5 (866-953)||(7269447-7269536)
chr5 (921-976)||(35395389-35395446)
chr5 (867-941)||(34328840-34328916)
[»] chr7 (26 HSPs)
chr7 (865-1006)||(34776895-34777041)
chr7 (867-1006)||(39859209-39859353)
chr7 (892-1006)||(13168145-13168267)
chr7 (867-1009)||(37115503-37115650)
chr7 (867-1006)||(6602335-6602479)
chr7 (870-1009)||(24228386-24228530)
chr7 (866-1009)||(47386186-47386334)
chr7 (867-1009)||(30940402-30940549)
chr7 (867-1009)||(38474120-38474267)
chr7 (892-1006)||(45359361-45359480)
chr7 (866-953)||(13169684-13169773)
chr7 (860-953)||(35403620-35403715)
chr7 (865-953)||(6605398-6605488)
chr7 (865-1009)||(27666042-27666191)
chr7 (865-953)||(39857643-39857733)
chr7 (867-953)||(34774998-34775086)
chr7 (867-953)||(37113941-37114029)
chr7 (921-997)||(37796170-37796249)
chr7 (921-1009)||(48852324-48852415)
chr7 (868-941)||(24226582-24226657)
chr7 (867-968)||(56330-56435)
chr7 (865-953)||(22155848-22155938)
chr7 (865-953)||(22211763-22211853)
chr7 (867-914)||(23906309-23906356)
chr7 (919-1009)||(35693347-35693442)
chr7 (867-953)||(47384294-47384382)
[»] chr2 (20 HSPs)
chr2 (866-1009)||(39664745-39664893)
chr2 (865-1007)||(44709744-44709891)
chr2 (867-1006)||(19908246-19908391)
chr2 (866-1006)||(16763075-16763220)
chr2 (861-1009)||(17696200-17696353)
chr2 (865-1009)||(40560221-40560370)
chr2 (866-1009)||(2766933-2767081)
chr2 (861-1009)||(14389081-14389234)
chr2 (867-1009)||(6797507-6797654)
chr2 (866-1009)||(39455168-39455316)
chr2 (871-1009)||(42519202-42519346)
chr2 (919-1006)||(16377197-16377287)
chr2 (867-944)||(19581414-19581493)
chr2 (867-941)||(34400314-34400390)
chr2 (864-953)||(16376733-16376824)
chr2 (870-944)||(19906685-19906761)
chr2 (867-953)||(39456781-39456869)
chr2 (865-953)||(16764612-16764702)
chr2 (867-953)||(14387349-14387437)
chr2 (867-953)||(39663154-39663242)
[»] scaffold0564 (1 HSPs)
scaffold0564 (869-1006)||(8264-8404)
[»] chr4 (23 HSPs)
chr4 (867-1006)||(35404425-35404569)
chr4 (868-1009)||(49523125-49523271)
chr4 (870-1009)||(41761723-41761867)
chr4 (866-1009)||(41781538-41781686)
chr4 (867-1006)||(51011926-51012070)
chr4 (867-1009)||(48813787-48813934)
chr4 (866-953)||(20493826-20493915)
chr4 (917-1009)||(42980687-42980782)
chr4 (865-953)||(35401747-35401837)
chr4 (919-1009)||(48646724-48646817)
chr4 (892-1009)||(2693230-2693351)
chr4 (866-953)||(49524734-49524823)
chr4 (892-1006)||(52868129-52868248)
chr4 (892-953)||(39345589-39345652)
chr4 (867-944)||(48645255-48645334)
chr4 (866-953)||(43507166-43507255)
chr4 (867-953)||(319273-319361)
chr4 (867-953)||(4173741-4173829)
chr4 (867-953)||(33266011-33266099)
chr4 (867-953)||(43508654-43508742)
chr4 (867-953)||(43519424-43519512)
chr4 (866-936)||(320918-320990)
chr4 (867-953)||(33264382-33264470)
[»] chr6 (14 HSPs)
chr6 (919-1009)||(9398714-9398807)
chr6 (892-1009)||(20523391-20523513)
chr6 (866-1006)||(32439071-32439216)
chr6 (919-1009)||(7372935-7373028)
chr6 (864-1006)||(32516874-32517021)
chr6 (919-1009)||(10568453-10568546)
chr6 (866-1009)||(13613559-13613707)
chr6 (867-944)||(10569929-10570008)
chr6 (868-1006)||(11355223-11355366)
chr6 (921-1009)||(6899541-6899632)
chr6 (956-1009)||(7049850-7049904)
chr6 (867-953)||(32518498-32518586)
chr6 (864-934)||(7371172-7371244)
chr6 (867-953)||(9400036-9400124)
[»] scaffold1454 (1 HSPs)
scaffold1454 (870-1006)||(1266-1407)
[»] scaffold0058 (3 HSPs)
scaffold0058 (865-1009)||(3292-3441)
scaffold0058 (865-1009)||(4464-4613)
scaffold0058 (865-953)||(14344-14434)
[»] scaffold0002 (1 HSPs)
scaffold0002 (874-941)||(436272-436341)


Alignment Details
Target: chr3 (Bit Score: 691; Significance: 0; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 691; E-Value: 0
Query Start/End: Original strand, 1 - 834
Target Start/End: Original strand, 595889 - 596719
Alignment:
Q  1 cctacaaagtcggagacgaatttgatggtttactcaaacaaatacaaactatgaaaataaacttaaacatatgtacctgtcatgtagagcgaacaaaact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  595889 cctacaaagtcggagacgaatttgatggtttactcaaacaaatacaaactgtgaaaataaactttaacatatgtacctgtcatgtagagcgaacaaaact 595988  T
Q  101 ccatctgaagaacgagagacatcaatctcaatacaatcaactcgagattgaagagcagatcgatacgcggccatctacaaaacacgtttacatttcaact 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  595989 ccatctgaagaacgagagacatcaatctcaatacaatcaactcgagattgaagagcagatcgatacgcggccatctacaaaacacatttacatttcaact 596088  T
Q  201 aaaaaa-taaaagagtgcagattctgacacctaatacgacactgacacattgacactagtattaatttaataatttaatcataagtgcatttgcctatnn 299  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||      
T  596089 aaaaaaataaaagagtgcaaattctgacacctgatacgacactgacagattgacaccggtattaatttaataatttaatcataaatgcatttgcctataa 596188  T
Q  300 nnnnnn-tgtaatcgtatgtgtcggacacagatacgtcttcaatatgaagtgtcagtgctacagagtgtataaacttacggtgttaggtgatgcgttgga 398  Q
           ||||||| |||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  596189 aaaaaaatgtaatcatatgtgtcggacacagatacgtgttcaatttcaagtgtca-tgctacagagtgtataaacttacggtgttaggtgatgcgttgga 596287  T
Q  399 agaatcaccaccgtgagcacaaacaagaggaggattattaacccaaccacatctcttgagttgaatctgatgaaaacgacggagacggaaatggaagaag 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  596288 agaatcaccaccgtgagcacaaacaagaggaggattattaacccaaccacatctcttgagttgaatctgatgaaaacgacggagacggaaatggaagaag 596387  T
Q  499 attggtggcaatatagctacaatgataagacacaaaatcatcaccttccgtgaacataatcttcttattgagattgattttgatttagagtttcttgata 598  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  596388 attggtggcaatatagctacaatgatgagacacaaaatcatcacctttcgtgaacataatcttcttattgagattgattttgatttagagtttcttgatc 596487  T
Q  599 ttaaagaatctcttgttgatctatacaacattgttgtaatttgattggtggttgaatgaataaattctatatctctaattttctgttgtttttcattact 698  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  596488 ttaaagaatctcttgttgatctatacaacattgttgtaatttgattggtggttgaatgaatgaattctatatctctaattttctgttgtttttcattact 596587  T
Q  699 ttaacataattccccaattcagacagacactcacaatcgttaatcctttaaattggaatggccaggaatgaataagcatactctcacttctcacctaacc 798  Q
    |||||||||||||||||||    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  596588 ttaacataattccccaatt----cagacactcacactcgttaatcctttaaattggaatggccaggaatgaataagcatactctcacttctcacctaacc 596683  T
Q  799 ttaatatttcgacaatttcaccgattaaaaacaaaa 834  Q
    ||||||||| ||||||||||||||||||||| ||||    
T  596684 ttaatatttagacaatttcaccgattaaaaagaaaa 596719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 826 - 944
Target Start/End: Original strand, 600684 - 600804
Alignment:
Q  826 aaaacaaaatggttaaatatgtttttgatacatataaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaat 923  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||||  |||||||||    
T  600684 aaaacaaaatggttaaatatgtttttggtacatataaatttgactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaat 600783  T
Q  924 tttgcgaaatatctatttagt 944  Q
    ||| | |||||||||||||||    
T  600784 tttacaaaatatctatttagt 600804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 867 - 1006
Target Start/End: Complemental strand, 53190903 - 53190759
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  53190903 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 53190804  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||| || |||||||||||| ||||||||||||||||    
T  53190803 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 53190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 866 - 1006
Target Start/End: Complemental strand, 27899226 - 27899081
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    |||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||    
T  27899226 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 27899127  T
Q  962 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||| |||||||| || |||||||||||| ||||||||||||||||    
T  27899126 ccataaaaatggtccctccgtccaaaagctccgttagtggtgatga 27899081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 866 - 1009
Target Start/End: Original strand, 21348722 - 21348870
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    |||||||||||||| |||  | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||    
T  21348722 tgactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 21348821  T
Q  962 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||||| || |||||||||||| | |||||||||||| ||||    
T  21348822 ccatcaaaatggtccctccgtccaaaagctctgttagtggtgataatgt 21348870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 867 - 1009
Target Start/End: Complemental strand, 30600062 - 30599915
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | |||||||||| | |||||||||||||||   | |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  30600062 gactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtc 30599963  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
     ||||||||||| || |||||||||||| | |||||||||||||||||    
T  30599962 gatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 30599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 869 - 1009
Target Start/End: Original strand, 43765139 - 43765284
Alignment:
Q  869 ctaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtcca 964  Q
    ||||||||||| |||| | ||| |||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| |||||  ||| |||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  965 tcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||| || || ||||||||| |||||||||||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 43765284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 864 - 999
Target Start/End: Original strand, 54898434 - 54898574
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagac 959  Q
    |||||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||    
T  54898434 tttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagac 54898533  T
Q  960 gtccatcaaaatggtc-caccgtccaaaagccccgttagtg 999  Q
    || ||||||||||||| | |||||||||||| |||||||||    
T  54898534 gttcatcaaaatggtctctccgtccaaaagctccgttagtg 54898574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 864 - 1009
Target Start/End: Original strand, 51684607 - 51684757
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gac 959  Q
    ||||||||||| |||| |||| | ||| |||||| ||||||| ||||||||  | | |||||||||| ||||||||||||||| | |||||| ||  |||    
T  51684607 tttgactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagac 51684706  T
Q  960 gtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  51684707 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 51684757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 867 - 1006
Target Start/End: Complemental strand, 2226296 - 2226152
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||| | || |||||||||| | | ||||||||||||||    
T  2226196 catcaaaatgttccctccgtccaaaaactctgttagtggtgatga 2226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 881 - 1006
Target Start/End: Complemental strand, 35905842 - 35905712
Alignment:
Q  881 attcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-c 975  Q
    |||||| ||| |||||||||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| |||||| |||||||||||| |    
T  35905842 attcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtcc 35905743  T
Q  976 caccgtccaaaagccccgttagtggtgatga 1006  Q
    | |||||||||||| ||| ||||||||||||    
T  35905742 ctccgtccaaaagctccggtagtggtgatga 35905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 867 - 1006
Target Start/End: Original strand, 46112487 - 46112631
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  ||  |||||||||| ||||||||||||||| | ||||  ||| |||||||    
T  46112487 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtc 46112586  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||| || |||| |||||||   ||||||||||||||    
T  46112587 catcaaaatggtccctccgttcaaaagctatgttagtggtgatga 46112631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 867 - 1009
Target Start/End: Original strand, 17515310 - 17515457
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||| |||||| |||||||||  |   |||||||||||||||||||||||||| ||||||  ||| | |||||    
T  17515310 gactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 17515409  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||| || | |||||||| | |||||||||||||||||||    
T  17515410 catcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgt 17515457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 867 - 1009
Target Start/End: Complemental strand, 23293314 - 23293167
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaattttca--tgaattttgcgaaatatctatttagttcctgaattataga--cgtc 962  Q
    ||||||||||||| |||  ||||| |||||  ||||||| ||||||||  |   |||||||||||||||||||||||||| | |||||| || |  ||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  963 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||| ||||  |||||||||||| |||||||||||||||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 23293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 867 - 1006
Target Start/End: Original strand, 41977750 - 41977894
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtc 962  Q
    ||||||||||||| |||| | ||| ||||||||||||||||||||||   | | ||||||| |||||||||| | ||||| |||||||| ||  ||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    | |||||||||| || ||||||||||||  ||||| |||||||||    
T  41977850 cgtcaaaatggtccctccgtccaaaagcttcgttaatggtgatga 41977894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 920 - 1009
Target Start/End: Original strand, 42279562 - 42279654
Alignment:
Q  920 gaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||| ||||||||||||||| ||||||  ||| ||||||| ||||||||||| || |||||||||||| | |||||||||||||||||    
T  42279562 gaattttgcaaaatatctatttagtccctgaattttacagacgtctatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 919 - 1009
Target Start/End: Original strand, 46197774 - 46197867
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||| ||||||||||||||||||||||  ||| |||||||||| |||||||| ||  ||||||||||  ||||||||| |||||||||    
T  46197774 tgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttagtgatgatgatgt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 915 - 1009
Target Start/End: Complemental strand, 48830900 - 48830803
Alignment:
Q  915 ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||  |||||||||||||||||   |||||| ||  ||||||||||||||||||||  |||||||||||| | |||||||||||||||||    
T  48830900 ttcatgaatttaacgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 48830803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 867 - 1009
Target Start/End: Complemental strand, 3152362 - 3152215
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| ||| || |||||||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||  ||| |||||||    
T  3152362 gactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3152263  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||   || || |||||||||||  |||||| | ||||||||||    
T  3152262 catcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgt 3152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 23291570 - 23291658
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||| | |||| | ||| |||||||||||||||||||||||  | | ||||||||||||||||||||||||||  |||||||    
T  23291570 gactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatt 23291658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 870 - 1006
Target Start/End: Original strand, 2377032 - 2377173
Alignment:
Q  870 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtccat 965  Q
    |||||||||| |||| || || |||||| |||||| | |||||||  | | |||||||||| ||| || ||||||||  ||||||| ||  |||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  966 caaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    ||||||||| || ||||| |||||| ||||||||||||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttagtggtgatga 2377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 867 - 944
Target Start/End: Original strand, 48829356 - 48829435
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaattt--tcatgaattttgcgaaatatctatttagt 944  Q
    ||||||||||||| |||| | ||| |||||| |||| || |||||||||  || ||||||||||||||||||||||||||    
T  48829356 gactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagt 48829435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 861 - 953
Target Start/End: Complemental strand, 53094368 - 53094274
Alignment:
Q  861 aaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||| |||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  53094368 aaatatgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 53094274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 866 - 944
Target Start/End: Complemental strand, 46114196 - 46114115
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaa-tcggccaaatttt--catgaattttgcgaaatatctatttagt 944  Q
    |||||| ||||||| ||| || ||| |||||||||||| ||||||||||||   | ||||||||||||||||||||||||||    
T  46114196 tgactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagt 46114115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 611311 - 611223
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||||||||||| ||||||||  | | |||||||| ||||||| ||||||||  ||||||||    
T  611311 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatt 611223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 38191895 - 38191983
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | |||||||||| |||||| |||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 38191983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 38193599 - 38193511
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  38193599 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 38193511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 41979441 - 41979353
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  41979441 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 41979353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 46308807 - 46308895
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 46308895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 864 - 904
Target Start/End: Original strand, 27897148 - 27897188
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaat 904  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  27897148 tttgactaatacctcaaattctttcttaaattttaaaaaat 27897188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 867 - 944
Target Start/End: Complemental strand, 51686483 - 51686404
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 944  Q
    ||||||||||||| |||| | |||||||||| ||||||| ||||||||  | | | ||||||||||||||| ||||||||    
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagt 51686404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 892 - 953
Target Start/End: Complemental strand, 54412611 - 54412548
Alignment:
Q  892 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| || ||||||  | | |||||||||||| ||||||||||||||||||||||    
T  54412611 aattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaatt 54412548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 956 - 1006
Target Start/End: Complemental strand, 7884924 - 7884873
Alignment:
Q  956 agacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||||||||||||  |||||||||||  ||||||||||||||||    
T  7884924 agacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 865 - 953
Target Start/End: Original strand, 46609147 - 46609237
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||| |||| |||| ||||| |||||| ||||||||||||| ||  | | ||||||||| |||||||| | ||||| ||||||||    
T  46609147 ttgactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatt 46609237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 867 - 913
Target Start/End: Complemental strand, 7884988 - 7884942
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaat 913  Q
    ||||||||||||| |||| | ||| ||||||||||||||||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaat 7884942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 866 - 941
Target Start/End: Original strand, 30598336 - 30598413
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 941  Q
    |||||||||||||| |||| | ||| |||||| ||||||||| ||||||  | | |||||||||||||||| ||||||    
T  30598336 tgactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattt 30598413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 870 - 953
Target Start/End: Complemental strand, 42282559 - 42282474
Alignment:
Q  870 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||| |||| | ||| |||||| ||||||| | ||||||  ||  |||||||||||||||||||||||||| | ||||||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaatt 42282474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 956 - 1009
Target Start/End: Complemental strand, 44276247 - 44276193
Alignment:
Q  956 agacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||| |||||||||||||||  |||||||||||| | |||||||||||||||||    
T  44276247 agacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 44276193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 866 - 1009
Target Start/End: Original strand, 44794207 - 44794354
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattat--agacgt 961  Q
    |||||||||||||| |||| | ||| |||||| |||| |||||||| ||  | | |||||||||||||||||| | ||||| |||||||| |  ||| ||    
T  44794207 tgactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagt 44794305  T
Q  962 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||| | || || |||||||||||  |||||| | ||||||||||    
T  44794306 ccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 44794354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 3150252 - 3150340
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  3150252 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 3150340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 44795979 - 44795891
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| |||||||||| || ||  ||| |||||||||||||||||| | ||||| | ||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaatt 44795891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 54900163 - 54900075
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | || || ||||||||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatt 54900075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 1e-37; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 865 - 1006
Target Start/End: Complemental strand, 8609933 - 8609787
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 960  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| |||||    
T  8609933 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 8609834  T
Q  961 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||    
T  8609833 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 8609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 867 - 1009
Target Start/End: Original strand, 13282478 - 13282625
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| | |||||    
T  13282478 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 13282577  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  13282578 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 13282625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 866 - 1006
Target Start/End: Original strand, 38547227 - 38547372
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaat--tttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    ||||||||||||||  ||| | ||| ||||||||||||||||||||||   | |||||||||||||||||||| | ||||| ||||||  ||| ||||||    
T  38547227 tgactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgt 38547326  T
Q  962 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    ||||||||||||| || || ||||||||| ||||||||||||||||    
T  38547327 ccatcaaaatggtccctccatccaaaagctccgttagtggtgatga 38547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 867 - 1009
Target Start/End: Complemental strand, 41042728 - 41042581
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaattataga--cgtc 962  Q
    ||||||||||| | || | | ||| ||||||||||||| ||||||||||   | ||||||||| |||||||||||||||| |||||||| || |  ||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtc 41042629  T
Q  963 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||    
T  41042628 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 41042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 865 - 1009
Target Start/End: Complemental strand, 26242460 - 26242311
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 960  Q
    |||| ||||||||||  ||| ||||| |||||| ||||||| ||||||||  | | | ||||||||||||||||||||||||  |||||  ||| |||||    
T  26242460 ttgattaatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacg 26242361  T
Q  961 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||||| || |||||||||||| |||||||||| ||||||||    
T  26242360 tccatcaaaatggtccctccgtccaaaagctccgttagtggcgatgatgt 26242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 867 - 1006
Target Start/End: Complemental strand, 13108480 - 13108336
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    |||||||| |||| |||| | ||| ||||||||||||||||| ||||   | | |||||||||||||||||| | ||||| ||||||  ||| |||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||| || ||||||||||||  |||||||||||||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatga 13108336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 919 - 1009
Target Start/End: Complemental strand, 41825734 - 41825641
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||||||||||||||||| ||||||  ||| |||||||||||||||||||| | |||||||||||| | |||||| ||||||||||    
T  41825734 tgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcactccgtccaaaagctctgttagtagtgatgatgt 41825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 42943515 - 42943427
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatt 42943427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 870 - 1009
Target Start/End: Original strand, 42941777 - 42941921
Alignment:
Q  870 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccat 965  Q
    |||||||||| |||| | ||| |||||||||||||| ||||||||  | | ||||||||| ||||||| |||||||| ||||||  ||| ||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  966 caaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||| || || |||||||||| | |||||||||| ||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgt 42941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 864 - 953
Target Start/End: Complemental strand, 5038153 - 5038063
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||||| |||| | ||| |||||||||||||||| ||||||  ||| |||||||||||||||| ||||||||| ||||||||    
T  5038153 tttgactaatacctcaaattcgt-cttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatt 5038063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 922 - 1009
Target Start/End: Complemental strand, 13486186 - 13486096
Alignment:
Q  922 attttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||||||||||||||| ||||||  ||| ||||||||||||||||||| || | |||||||||| || ||||| ||||||||||    
T  13486186 attttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctctgtccaaaagctccattagtagtgatgatgt 13486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 919 - 1009
Target Start/End: Complemental strand, 7745202 - 7745109
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||||||||| |||||||| |||| ||| ||  ||| ||||||||||||||||  || ||||||||| |||||||||||||||||||    
T  7745202 tgaattttgcgaaatatttatttagtccctgtattttacagacatccatcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 7745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 919 - 1009
Target Start/End: Complemental strand, 9673255 - 9673162
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||| |||||||||||||| | ||||||  ||| ||||||||||||||||||| || ||||| ||||||  ||||||||||||||||||    
T  9673255 tgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgatgatgt 9673162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 919 - 1009
Target Start/End: Original strand, 22272390 - 22272483
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||| |||||||||||||| ||||||  ||| | |||||||||||||| || || || ||||||||| |||||||||||||||||||    
T  22272390 tgaattttgcgtaatatctatttagtccctgaattttacaaacgtccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgt 22272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 868 - 975
Target Start/End: Original strand, 5036446 - 5036557
Alignment:
Q  868 actaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtcc 963  Q
    |||||||||||| |||| | |||||||||||||||||| | ||||||  | | ||||||||| |||||||||||||||| | ||||  ||| |||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  964 atcaaaatggtc 975  Q
    ||||||||||||    
T  5036546 atcaaaatggtc 5036557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 22273980 - 22273892
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaattt-tc-atgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||  | ||| |||||||||||||||||||||||| ||  |||||||||| ||||||||||||||| ||||||||    
T  22273980 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatt 22273892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 867 - 944
Target Start/End: Complemental strand, 34681155 - 34681076
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 944  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||||||  | | ||||||||||||||||||||||||||    
T  34681155 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagt 34681076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 867 - 944
Target Start/End: Original strand, 26238726 - 26238805
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 944  Q
    ||||||||||||| |||| | ||| |||||| ||||||| ||||||||  | | ||||||||||||||||||||||||||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagt 26238805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 867 - 969
Target Start/End: Original strand, 27691154 - 27691260
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||  ||| |||||||    
T  27691154 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 27691253  T
Q  963 catcaaa 969  Q
    |||||||    
T  27691254 catcaaa 27691260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 864 - 953
Target Start/End: Original strand, 13106801 - 13106892
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||| | |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  13106801 tttgactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatt 13106892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 857 - 953
Target Start/End: Complemental strand, 38548930 - 38548832
Alignment:
Q  857 atataaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||| || |||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||| | ||||||||    
T  38548930 atatatatatgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatt 38548832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 866 - 953
Target Start/End: Complemental strand, 33762803 - 33762714
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||| ||||||||| | ||||| ||||||||    
T  33762803 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatt 33762714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 919 - 1009
Target Start/End: Complemental strand, 40339770 - 40339677
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||| || |||||||||||||||| | ||||  ||| ||| ||||||||||||||| ||  | ||||||||| |||||||| ||||||||||    
T  40339770 tgaattatgtgaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 601793 - 601705
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||| ||||||||| | ||||| ||||||||    
T  601793 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatt 601705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 27692926 - 27692838
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||| ||||||| | ||||| ||||||||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatt 27692838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 8e-36; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 863 - 1009
Target Start/End: Original strand, 27087279 - 27087430
Alignment:
Q  863 atttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttataga 958  Q
    ||||||||||||||||| |||| | |||||||||||||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| | |    
T  27087279 atttgactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaa 27087378  T
Q  959 cgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  27087379 cgtccatcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgt 27087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 865 - 1006
Target Start/End: Complemental strand, 31238621 - 31238475
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacg 960  Q
    ||||||||||||||| |||  | ||| ||||||||||||||||||||||||   | |||||||||||||||||||||||||| ||||||  ||| |||||    
T  31238621 ttgactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 31238522  T
Q  961 tccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 1006  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||    
T  31238521 tccatcaaaatggtccatctgtccaaaagctccgttagtggtgatga 31238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 865 - 1006
Target Start/End: Complemental strand, 4856092 - 4855946
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 960  Q
    ||||||||||||||| |||| | ||| ||||||||||||||||||||||   | | |||||||||||||||||| | ||||| ||||||  ||| |||||    
T  4856092 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 4855993  T
Q  961 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||||| || |||||||||||| |||||| |||||||||    
T  4855992 tccatcaaaatggtccctccgtccaaaagctccgttaatggtgatga 4855946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 865 - 1006
Target Start/End: Complemental strand, 25278494 - 25278348
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 960  Q
    ||||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||||||||| ||||||||| | ||||  ||| | |||    
T  25278494 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacg 25278395  T
Q  961 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||    
T  25278394 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 25278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 866 - 1006
Target Start/End: Complemental strand, 6818803 - 6818658
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgt 961  Q
    |||||||||||||| |||| | ||| ||||||||||||||||||||| |  | | || |||| || ||||||||||||||| |||||||| ||  |||||    
T  6818803 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgt 6818704  T
Q  962 ccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||    
T  6818703 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 867 - 1006
Target Start/End: Complemental strand, 34778262 - 34778118
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtc 962  Q
    ||||||||||||| |||| | ||| ||||||||||||||||||||||   | | |||||||||||||||||| | ||||| |||||||| ||  || |||    
T  34778262 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtc 34778163  T
Q  963 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 1006  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||    
T  34778162 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 34778118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 867 - 1009
Target Start/End: Original strand, 2869579 - 2869726
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||||||  | | ||||||||||||||||||||||||||  || ||  ||| |||||||    
T  2869579 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtc 2869678  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||| || |||||||||||| | |||||||||||||||||    
T  2869679 catcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 2869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 864 - 1009
Target Start/End: Complemental strand, 51896279 - 51896129
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagac 959  Q
    ||||||| |||||||| || | | |||||||||||||||||| | |||||||   | |||||||||||||||||||||||||| ||||||  ||| |||     
T  51896279 tttgactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagat 51896180  T
Q  960 gtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||| || || |||||||||||| | |||||||||||||||||    
T  51896179 gtccatcaaaatagtccctccgtccaaaagctctgttagtggtgatgatgt 51896129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 919 - 1009
Target Start/End: Original strand, 15104495 - 15104588
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggtcc-accgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||||||||||||||||| ||||||  ||| |||||||||||||||||||||  |||||||||||| || ||||||||||||||||    
T  15104495 tgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgatgt 15104588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 867 - 1006
Target Start/End: Original strand, 37344342 - 37344486
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||||||||| |||||||||   ||||  ||| | |||||    
T  37344342 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtc 37344441  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||| || |||||||||||| ||||||||||||||||    
T  37344442 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 37344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 864 - 953
Target Start/End: Original strand, 31236816 - 31236907
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||||| |||| | ||| |||||||||||||||| |||||||   | |||||||||||||||||||||||||||||||||||    
T  31236816 tttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaatt 31236907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 866 - 1009
Target Start/End: Complemental strand, 3013601 - 3013447
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    |||||||||||||| |||| | ||| |||||||||| ||| | ||||||  | |||||||||||||||||||||||||||| ||||||  ||| ||||||    
T  3013601 tgactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgt 3013502  T
Q  962 c------catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |      ||||||||| || || |||||||||||| |||||||||||||||||||    
T  3013501 ccatggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 860 - 1005
Target Start/End: Complemental strand, 50556228 - 50556078
Alignment:
Q  860 taaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttat 955  Q
    |||||| |||||||| |||| |||| |  || |||||||||||||| | ||||||  |   |||||||||||||||||||||||||| ||| ||  |||     
T  50556228 taaattagactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttac 50556129  T
Q  956 agacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatg 1005  Q
    ||||||| ||||||||||| || |||||||||||| |||||||||||||||    
T  50556128 agacgtctatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 870 - 953
Target Start/End: Original strand, 3011858 - 3011943
Alignment:
Q  870 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||| |||| | |||||||||||||||||| | ||||||  ||| ||||||||||||||||||||||||||  |||||||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaatt 3011943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 866 - 953
Target Start/End: Complemental strand, 25279078 - 25278989
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||| |||| | ||| |||||| ||||||| ||||||||  ||| | |||||||||||||||||||||||| ||||||||    
T  25279078 tgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaatt 25278989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 866 - 941
Target Start/End: Complemental strand, 37088226 - 37088149
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 941  Q
    |||||||||||||| |||| | ||| |||||||||||||||||||||||  ||| |||||||||||||||| ||||||    
T  37088226 tgactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattt 37088149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 866 - 1009
Target Start/End: Complemental strand, 46583681 - 46583533
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    |||||||||||||| |||| | ||| |||||| ||||||||| ||| |||   | |||||||||||||||||| | ||||| ||||||  ||| ||||||    
T  46583681 tgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 46583582  T
Q  962 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||| | || || |||||||||||  |||||| ||||||||||||    
T  46583581 ccatcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgt 46583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 865 - 944
Target Start/End: Original strand, 25278852 - 25278933
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 944  Q
    ||||||||||||||| |||||| ||| |||||| ||||||| | ||||||  | | ||||||||||||||||||||||||||    
T  25278852 ttgactaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagt 25278933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 864 - 953
Target Start/End: Original strand, 25276739 - 25276830
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  25276739 tttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatt 25276830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 868 - 953
Target Start/End: Original strand, 50554164 - 50554251
Alignment:
Q  868 actaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||  ||||| ||||||||||||||||||    
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaatt 50554251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 870 - 953
Target Start/End: Original strand, 51894570 - 51894655
Alignment:
Q  870 taatacctcatattcattcttaaattttaaaaaatcggccaaattt-tca-tgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||| ||| |||| ||||| ||||||||||||| || ||||||| ||  ||||||||||||||||| |||||||| ||||||||    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaatt 51894655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 864 - 953
Target Start/End: Original strand, 26223584 - 26223675
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||||| |||| | ||| |||||| ||||||||| ||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  26223584 tttgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 26223675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 867 - 944
Target Start/End: Original strand, 52641888 - 52641967
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 944  Q
    ||||||||||||| |||| | ||| |||||| ||||||| ||||||||  | | ||||||||||||||||| ||||||||    
T  52641888 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagt 52641967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 34776569 - 34776657
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||| ||||||||| | ||||| ||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatt 34776657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 37346051 - 37345963
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| |||||||| |||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  37346051 gactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatt 37345963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 46582010 - 46582098
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||  | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  46582010 gactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 46582098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 3e-35; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 865 - 1006
Target Start/End: Original strand, 17574316 - 17574462
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 960  Q
    ||||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| |||||    
T  17574316 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 17574415  T
Q  961 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||    
T  17574416 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 17574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 867 - 1006
Target Start/End: Original strand, 7267843 - 7267987
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaattt-tca-tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| ||||||||||||||| |||||||  ||| |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  7267843 gactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtc 7267942  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||| | || |||||||||||| ||||||||||||||||    
T  7267943 catcaaaatgatccctccgtccaaaagctccgttagtggtgatga 7267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 867 - 1009
Target Start/End: Complemental strand, 36057737 - 36057590
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||||||  | | |||||||||||||||||||||||||  ||||||  ||| |||||||    
T  36057737 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtc 36057638  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||| || |||||||||||| |||||| ||||||||||||    
T  36057637 catcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgt 36057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 867 - 1009
Target Start/End: Original strand, 34327635 - 34327782
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| ||||||  ||||| |||||||||  |   |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  34327635 gactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 34327734  T
Q  963 catcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||||| | |||||||||||| | |||||||||||||||||    
T  34327735 catcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgt 34327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 865 - 953
Target Start/End: Complemental strand, 12738827 - 12738737
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||||    
T  12738827 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatt 12738737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 865 - 953
Target Start/End: Complemental strand, 12801650 - 12801560
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||||    
T  12801650 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatt 12801560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 867 - 1006
Target Start/End: Original strand, 2179787 - 2179931
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||  | ||| |||||||||||||||| ||||||  | | ||||||||| |||||||||||||| | ||||||  ||| |||| ||    
T  2179787 gactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatc 2179886  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||| || |||||||||||| || |||||||||||||    
T  2179887 catcaaaatggtccctccgtccaaaagctccattagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 921 - 1006
Target Start/End: Complemental strand, 30468348 - 30468260
Alignment:
Q  921 aattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||||||||||||||| | |||||| ||  ||||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  30468348 aattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 30468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 861 - 1005
Target Start/End: Original strand, 8539669 - 8539818
Alignment:
Q  861 aaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttata 956  Q
    |||| |||||||||||||| |||| | ||| |||||| |||||||   ||||||  ||| |||||||||||||||||||||||||| ||||||  ||| |    
T  8539669 aaatatgactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttaca 8539768  T
Q  957 gacgtccatcaaaatggtc-caccgtccaaaagccccgttagtggtgatg 1005  Q
     |||||||||||||| ||| | || ||||||||| ||||||||| |||||    
T  8539769 aacgtccatcaaaatagtcgctccatccaaaagctccgttagtgttgatg 8539818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 919 - 1009
Target Start/End: Complemental strand, 18625078 - 18624985
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaattataga--cgtccatcaaaatggtcc-accgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||| |||||||||||||||| |||||||| || |  ||||||||||||||||||  |||||||||||| |||||||| ||||||||||    
T  18625078 tgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttagtagtgatgatgt 18624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 30463900 - 30463988
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaatt 30463988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 8541360 - 8541272
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| |  || |||||||||||||||||||||||  | | |||||||||||||||||||||||||| | ||||||    
T  8541360 gactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatt 8541272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 2852886 - 2852974
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||||||||||||| ||| ||  | | |||||||||||||||||| | ||||||||||||||    
T  2852886 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatt 2852974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 865 - 953
Target Start/End: Complemental strand, 28813858 - 28813766
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaa--tcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||||| |||| | ||| ||||| ||||||  | |||||||||  | | |||||||||||||||||||||||||| ||||||||    
T  28813858 ttgactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaatt 28813766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 21843081 - 21842993
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||| |||   |||||||||||||||||||| | ||||| ||||||||    
T  21843081 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatt 21842993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 866 - 969
Target Start/End: Complemental strand, 24541337 - 24541230
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    |||||||||||||| |||| |  || |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||  ||| ||||||    
T  24541337 tgactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 24541238  T
Q  962 ccatcaaa 969  Q
    ||||||||    
T  24541237 ccatcaaa 24541230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 888 - 953
Target Start/End: Complemental strand, 43492201 - 43492134
Alignment:
Q  888 cttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||| ||||||| ||||| ||  | | |||||||||||||||||||||||||| ||||||||    
T  43492201 cttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatt 43492134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 866 - 953
Target Start/End: Complemental strand, 7269536 - 7269447
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||| |||| |  || ||||||||||||||||| || ||  | | |||||||||||||||||| | ||||| ||||||||    
T  7269536 tgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 7269447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 921 - 976
Target Start/End: Original strand, 35395389 - 35395446
Alignment:
Q  921 aattttgcgaaatatctatttagttcctgaatt--atagacgtccatcaaaatggtcc 976  Q
    |||| ||||||||||| ||||||||||||||||   |||||||||||||||| |||||    
T  35395389 aattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaaggtcc 35395446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 941
Target Start/End: Complemental strand, 34328916 - 34328840
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 941  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||||||  | |||||||||||| ||||| ||||||    
T  34328916 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattt 34328840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 8e-33; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 865 - 1006
Target Start/End: Complemental strand, 34777041 - 34776895
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 960  Q
    |||| |||||||||| |||| ||||||||||||||||||| |||||||||  ||| |||||||||||||||||||||||||| ||||||  ||| |||||    
T  34777041 ttgattaatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacg 34776942  T
Q  961 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||||| || |||||||||| | ||||||||| ||||||    
T  34776941 tccatcaaaatggtccctccgtccaaaaactccgttagtgatgatga 34776895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 867 - 1006
Target Start/End: Complemental strand, 39859353 - 39859209
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| | ||||  ||| |||||||    
T  39859353 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtc 39859254  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    | |||||||||| || |||||||||||| ||||||||||||||||    
T  39859253 cgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 39859209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 892 - 1006
Target Start/End: Original strand, 13168145 - 13168267
Alignment:
Q  892 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt---tcctgaa--ttatagacgtccatcaaaatggtcca-ccgtcc 983  Q
    |||||||||||||||||||||||  | | ||||||||||||||||||||||||||   |||||||  ||| |||||||||||||||||||||| ||||||    
T  13168145 aattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccgtcc 13168244  T
Q  984 aaaagccccgttagtggtgatga 1006  Q
    |||||| ||||||||||||||||    
T  13168245 aaaagctccgttagtggtgatga 13168267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 867 - 1009
Target Start/End: Complemental strand, 37115650 - 37115503
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtc 962  Q
    ||||||||||||| |||| |  || |||||||||||||| | ||||||  ||| |||||||||| ||||||||||||||| |||||||| ||  ||||||    
T  37115650 gactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtc 37115551  T
Q  963 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||| ||||  |||||||||||| |||||||||||||||||||    
T  37115550 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 37115503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 867 - 1006
Target Start/End: Original strand, 6602335 - 6602479
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    |||||||| |||| ||||   ||| ||||||||||||||||| ||| ||   | |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  6602335 gactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 6602434  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||| || |||||||||||| ||||||||||||||||    
T  6602435 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 870 - 1009
Target Start/End: Complemental strand, 24228530 - 24228386
Alignment:
Q  870 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccat 965  Q
    ||||||||||  ||| ||||| ||||||||||||| |||||||||  | | ||||||||||||||||||||||||||  |||||  ||| ||||||||||    
T  24228530 taatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 24228431  T
Q  966 caaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||| ||  ||||||||||| || ||||||||||||||||    
T  24228430 caaaatggtcccttcgtccaaaagctccattagtggtgatgatgt 24228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 866 - 1009
Target Start/End: Complemental strand, 47386334 - 47386186
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgt 961  Q
    |||||||||||||| |||| | ||| |||||||||||||| | ||||||  | | ||||||||||||||||| ||||||||  || |||| ||  |||||    
T  47386334 tgactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgt 47386235  T
Q  962 ccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||||||   |||||||||||| |||||||||||||||||||    
T  47386234 ccatcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgt 47386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 867 - 1009
Target Start/End: Complemental strand, 30940549 - 30940402
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattataga--cgtc 962  Q
    ||||||||||| | |||  ||||| |||||||||||||||||||||||  |   | |||||| ||||||||||||||||| |||||||| || |  |||     
T  30940549 gactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgtt 30940450  T
Q  963 catcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||||    
T  30940449 catcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgt 30940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 867 - 1009
Target Start/End: Complemental strand, 38474267 - 38474120
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtc 962  Q
    ||||||||||||| |||  | ||  |||||| ||||||||| ||||||  | | |||||||||||||||||||||||||| | |||||| ||  |||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  963 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
     |||||||||||||| |||||||||||| |||||||||||||||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgt 38474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 892 - 1006
Target Start/End: Original strand, 45359361 - 45359480
Alignment:
Q  892 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaa 986  Q
    |||||||||||||||| |||||   | | |||||||||||||||||||||||||| | ||||  ||| ||||||||||||||||||| || || ||||||    
T  45359361 aattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccatccaaa 45359460  T
Q  987 agccccgttagtggtgatga 1006  Q
    ||| ||||||||||||||||    
T  45359461 agctccgttagtggtgatga 45359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 866 - 953
Target Start/End: Complemental strand, 13169773 - 13169684
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||| |||| | ||| |||||| |||||||||||||||||   | |||||||||||||||||||||||||| ||||||||    
T  13169773 tgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatt 13169684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 860 - 953
Target Start/End: Complemental strand, 35403715 - 35403620
Alignment:
Q  860 taaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||||||||| |||| | ||| |||||||||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  35403715 taaatttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 35403620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 865 - 953
Target Start/End: Complemental strand, 6605488 - 6605398
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaattt--tcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||| |||||||||| |||  | ||| |||||||||||||||| |||||||  || |||||||||||||||| ||||||||| ||||||||    
T  6605488 ttgattaatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaatt 6605398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 865 - 1009
Target Start/End: Complemental strand, 27666191 - 27666042
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattataga--cg 960  Q
    ||||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| |||||||| || |  ||    
T  27666191 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacg 27666092  T
Q  961 tccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||   ||||  ||||||||||| ||||||| | ||||||||||    
T  27666091 tccatcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgt 27666042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 865 - 953
Target Start/End: Original strand, 39857643 - 39857733
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||| |||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||||||||||||||||||| || |||||    
T  39857643 ttgattaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatt 39857733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 34774998 - 34775086
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||| |||| |||| |  || |||||||||||||||| ||||||  |||||||||||||| ||||| ||||||||| ||||||||    
T  34774998 gactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaatt 34775086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 37113941 - 37114029
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| ||||||||||||| || ||||||  | | |||||||||||||||||||||||||| ||| ||||    
T  37113941 gactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatt 37114029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 921 - 997
Target Start/End: Complemental strand, 37796249 - 37796170
Alignment:
Q  921 aattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggt-ccaccgtccaaaagccccgttag 997  Q
    |||||||||||||||||||||||| |||||||| ||  ||||||||||||||| || || ||||||| |||| |||||||    
T  37796249 aattttgcgaaatatctatttagtccctgaattttacggacgtccatcaaaatagtccctccgtccataagctccgttag 37796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 921 - 1009
Target Start/End: Complemental strand, 48852415 - 48852324
Alignment:
Q  921 aattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||| ||||||||||||| | | |||||| ||  ||||||||||||||||||| | | |||||||||| | |||||||||||||||||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttagtggtgatgatgt 48852324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 868 - 941
Target Start/End: Original strand, 24226582 - 24226657
Alignment:
Q  868 actaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 941  Q
    |||||||||||| |||| | ||| |||||| ||||||||||||||||  | | |||||||||||||||| ||||||    
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattt 24226657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 867 - 968
Target Start/End: Original strand, 56330 - 56435
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||| |||||||||| || ||  | | |||||||||||||||||| | ||||| ||||||  ||| |||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  963 catcaa 968  Q
    ||||||    
T  56430 catcaa 56435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 865 - 953
Target Start/End: Complemental strand, 22155938 - 22155848
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |  ||| | ||| |||||| ||||||||||||||||  | |||||||||||| ||||| |||||| || ||||||||    
T  22155938 ttgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatt 22155848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 865 - 953
Target Start/End: Complemental strand, 22211853 - 22211763
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |  ||| | ||| |||||| ||||||||||||||||  | |||||||||||| ||||| |||||| || ||||||||    
T  22211853 ttgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatt 22211763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 867 - 914
Target Start/End: Complemental strand, 23906356 - 23906309
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt 914  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||    
T  23906356 gactaatacctcaaattcctccttgaattttaaaaaatcggccaaatt 23906309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 919 - 1009
Target Start/End: Complemental strand, 35693442 - 35693347
Alignment:
Q  919 tgaattttgcgaaatatctat--ttagttcctgaattata--gacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||| ||||||| |  ||||| |||||||| ||  |||||||||||||||||| || || ||||||||  | |||||||||||||||||    
T  35693442 tgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtggtgatgatgt 35693347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 47384294 - 47384382
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||  ||||||||  | | |||||||||||||||||||| ||||| || |||||    
T  47384294 gactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatt 47384382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 1e-31; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 866 - 1009
Target Start/End: Complemental strand, 39664893 - 39664745
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgt 961  Q
    |||||||||||||| |||| | ||| |||||||||||||||||||||||  | |  ||||||| ||||||||||||||||| |||||||| ||  |||||    
T  39664893 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgt 39664794  T
Q  962 ccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||||    
T  39664793 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 39664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 865 - 1007
Target Start/End: Complemental strand, 44709891 - 44709744
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacg 960  Q
    ||||||||||||||| |||| | ||| |||||||||||| ||||||||||    | |||||||||||||||| ||||||||| ||||||  ||| |||||    
T  44709891 ttgactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacg 44709792  T
Q  961 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgat 1007  Q
    |||||||||||||| || ||||||||||||  ||||||||||||||||    
T  44709791 tccatcaaaatggtccctccgtccaaaagcttcgttagtggtgatgat 44709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 867 - 1006
Target Start/End: Complemental strand, 19908391 - 19908246
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaa-tcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    ||||||||||||| |||| | ||| |||||||||||| |||||||||||  | | |||||||||||||||||||||||||| | ||||  ||| ||||||    
T  19908391 gactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgt 19908292  T
Q  962 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    || |||||||||| || |||||||||||| ||||||||||||||||    
T  19908291 ccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 19908246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 866 - 1006
Target Start/End: Original strand, 16763075 - 16763220
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    |||||||||||||| |||| | ||| |||||| ||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||    
T  16763075 tgactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 16763174  T
Q  962 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    ||||||||||||| || |||||||||| | | |||||||| |||||    
T  16763175 ccatcaaaatggtccctccgtccaaaatctctgttagtggcgatga 16763220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 861 - 1009
Target Start/End: Original strand, 17696200 - 17696353
Alignment:
Q  861 aaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattataga 958  Q
    ||||| || |||||||||| |||| | ||| |||||| ||||||||||||||||  | | |||||||||  ||||||||||||||| |||||||| || |    
T  17696200 aaattagattaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttaca 17696299  T
Q  959 --cgtccatcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 1009  Q
      |||| |||||||||||| | |||||||||||| |||||||||||||||||||    
T  17696300 aacgtcaatcaaaatggtcactccgtccaaaagctccgttagtggtgatgatgt 17696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 865 - 1009
Target Start/End: Original strand, 40560221 - 40560370
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 960  Q
    ||||||||||| ||| |||| |  || |||||||||||||| ||||||||  | | |||||||||||||||||||||||||| ||||||  ||| |||||    
T  40560221 ttgactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 40560320  T
Q  961 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||| || || |||||||||||  | |||||||||||||||||    
T  40560321 tccatcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgt 40560370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 866 - 1009
Target Start/End: Original strand, 2766933 - 2767081
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    ||||||||| |||| |||| | ||| |||||| ||||||||| |||| |  | | |||||||||||||||||||||||||| ||||||  ||| ||||||    
T  2766933 tgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 2767032  T
Q  962 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    | ||||||||||| || | |||||||||| |||||||||||||||||||    
T  2767033 ctatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgt 2767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 861 - 1009
Target Start/End: Complemental strand, 14389234 - 14389081
Alignment:
Q  861 aaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattat--a 956  Q
    |||| |||||||||||||| |||| |  || |||||| ||||||||||||||||  | | |||||||||||||||||||||||||| |||||||| |  |    
T  14389234 aaatatgactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttcca 14389135  T
Q  957 gacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
     | ||||||||||||||| || |||||||||||   ||||||| ||||||||||    
T  14389134 aatgtccatcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgt 14389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 867 - 1009
Target Start/End: Original strand, 6797507 - 6797654
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||| | ||||||  || ||||||||||||| ||| |||||  ||| |||||||||||||||||||||||||| ||| ||  ||| |||||||    
T  6797507 gactaataccttaaattcatatttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtc 6797606  T
Q  963 catcaaaatgg-tccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
     |||||||||| ||| |||||||||||| | ||||  |||||||||||    
T  6797607 tatcaaaatggttcctccgtccaaaagctctgttacgggtgatgatgt 6797654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 866 - 1009
Target Start/End: Original strand, 39455168 - 39455316
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaattt--tcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    ||||||||| |||| |||  | ||| ||||||||||||||||  |||||   || |||||||||| ||||||||||||||| | ||||  ||| ||||||    
T  39455168 tgactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgt 39455267  T
Q  962 ccatcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||||| | |||| ||||||| |||||||||| ||||||||    
T  39455268 ccatcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgt 39455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 871 - 1009
Target Start/End: Complemental strand, 42519346 - 42519202
Alignment:
Q  871 aatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaa-ttttgcgaaatatctatttagttcctgaa--ttatagacgtccat 965  Q
    ||||||||| |||| | ||| ||||||||||||| |  ||||||  | | |||| |||||| ||||||||||||||| ||||||  ||| ||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  966 caaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||| || || ||||||||| |||||||||||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 42519202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 919 - 1006
Target Start/End: Complemental strand, 16377287 - 16377197
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaattataga--cgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||| ||||||||||||||| | |||||| || |  ||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  16377287 tgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 867 - 944
Target Start/End: Original strand, 19581414 - 19581493
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 944  Q
    ||||||||||||| |||| | |||||||||| ||||||| ||||||||  | | ||||||||||||||||||||||||||    
T  19581414 gactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagt 19581493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 867 - 941
Target Start/End: Original strand, 34400314 - 34400390
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 941  Q
    ||||||||||||| |||||| ||| |||||| ||||||||||||||||  | | |||||||||||||||| ||||||    
T  34400314 gactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattt 34400390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 864 - 953
Target Start/End: Original strand, 16376733 - 16376824
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||||| |||| |  || |||||||||||||||| ||||||  | | |||||||| ||||||| ||||||||| ||||||||    
T  16376733 tttgactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatt 16376824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 870 - 944
Target Start/End: Original strand, 19906685 - 19906761
Alignment:
Q  870 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 944  Q
    |||||||| | |||| | ||| |||||||||||||||| ||||||  | | ||||||||||||||||||||||||||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagt 19906761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 39456869 - 39456781
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||| ||| |||||| ||| ||||||||||||| ||  |||||  | |||||||||||| ||||| ||||||||| ||||||||    
T  39456869 gactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaatt 39456781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 865 - 953
Target Start/End: Complemental strand, 16764702 - 16764612
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||||| |||| | ||| |||||| | ||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  16764702 ttgactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 16764612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 14387349 - 14387437
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||| ||||||||| | ||||| ||||||||    
T  14387349 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatt 14387437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 39663154 - 39663242
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||| | |||| | ||| |||||| ||||||||| ||||||  | | |||||||||| ||||| ||||||||| ||||||||    
T  39663154 gactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatt 39663242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 869 - 1006
Target Start/End: Original strand, 8264 - 8404
Alignment:
Q  869 ctaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattatagacgtccatc 966  Q
    ||||||||||| |||| | ||| ||||||||||||| |||||||||  ||| |||||||||| ||||||||||||||| |||||||| || |||||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaattttatacgtccatc 8363  T
Q  967 aaaatggtcca-ccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||| || ||||||||||||  |||||||||||||||    
T  8364 aaaatggtacatccgtccaaaagcttcgttagtggtgatga 8404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 7e-27; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 867 - 1006
Target Start/End: Complemental strand, 35404569 - 35404425
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||||| ||| ||||||||||||||||| |||||  | | | ||||||||||||||| |||||| | ||||||  ||| |||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtc 35404470  T
Q  963 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 1006  Q
    || |||||||||||| |||||||||||| ||||||||||||||||    
T  35404469 caacaaaatggtccatccgtccaaaagctccgttagtggtgatga 35404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 868 - 1009
Target Start/End: Original strand, 49523125 - 49523271
Alignment:
Q  868 actaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtcc 963  Q
    |||||||||||| |||| |  || ||||||||||||||||| |||||  | |||||||||||||||||||||||||||| ||||||  ||| |||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  964 atcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||| || ||||||||||   |||||||||||||||||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgt 49523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 870 - 1009
Target Start/End: Complemental strand, 41761867 - 41761723
Alignment:
Q  870 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccat 965  Q
    |||||||||| |||| | ||| |||||| ||||||||||||||||  | |   |||||||||||||||||||||||| ||||||  ||| ||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  966 caaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||| || ||||||||||||  ||||||||||||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgt 41761723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 866 - 1009
Target Start/End: Original strand, 41781538 - 41781686
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    |||||||||||||| |||  ||||| |||||||||||||||| ||||||  | | |||||||||| |||||| |||||||| ||||||  ||| |||| |    
T  41781538 tgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacat 41781637  T
Q  962 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||||| || |||||||||||| ||||||||| |||||||||    
T  41781638 ccatcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 41781686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 867 - 1006
Target Start/End: Original strand, 51011926 - 51012070
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    |||||||| |||| |||| | ||| |||||||||||||||| ||||||  ||| ||||||||||||||||||||||||||  |||||  ||| |||||||    
T  51011926 gactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtc 51012025  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||| || |||||||||||| | |||||| |||||||    
T  51012026 catcaaaatggtccctccgtccaaaagctctgttagtagtgatga 51012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 867 - 1009
Target Start/End: Original strand, 48813787 - 48813934
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 962  Q
    ||||||||||||| |||| | ||| |||||| ||||||| |||||||||   | |||||||||| |||||| |||||||||||||||  |||||||||||    
T  48813787 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtc 48813886  T
Q  963 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||| ||  ||||||||||| | ||| |||||||||||||    
T  48813887 catcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgt 48813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 866 - 953
Target Start/End: Original strand, 20493826 - 20493915
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||| |||| |  || |||||||||| ||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  20493826 tgactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatt 20493915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 917 - 1009
Target Start/End: Original strand, 42980687 - 42980782
Alignment:
Q  917 catgaattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||| |||||| |||||||||| ||| |||| ||  ||||||||||||||||||||  |||||||||||| | |||||||||||||||||    
T  42980687 catgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42980782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 865 - 953
Target Start/End: Original strand, 35401747 - 35401837
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||||| |||| | ||| |||||||||||||||||||||||  | | ||||||||| |||||||||||||||| | ||||||    
T  35401747 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatt 35401837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 919 - 1009
Target Start/End: Complemental strand, 48646817 - 48646724
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggtcc-accgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||| |||||||||||||||||| ||||||  ||| |||| | ||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  48646817 tgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccgtccaaaagcttcgttagtggtgatgatgt 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 892 - 1009
Target Start/End: Complemental strand, 2693351 - 2693230
Alignment:
Q  892 aattttaaaaaatcggccaaattt--tcatgaattttgcgaaatatctatttagttcctgaattat-agacgtccatcaaaatggtcca-ccgtccaaaa 987  Q
    |||||||||||||| |||||||||  || | ||||||||||||||||||||||||   |||||| | | | |||||||||||||||||| ||||||| ||    
T  2693351 aattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaattttaaaatgtccatcaaaatggtccatccgtccataa 2693252  T
Q  988 gccccgttagtggtgatgatgt 1009  Q
    |  || |||||| |||||||||    
T  2693251 gttccattagtgatgatgatgt 2693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 866 - 953
Target Start/End: Complemental strand, 49524823 - 49524734
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||| ||||| ||||||||| ||||||||    
T  49524823 tgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatt 49524734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 892 - 1006
Target Start/End: Complemental strand, 52868248 - 52868129
Alignment:
Q  892 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt--atagacgtccatcaaaatggtc-caccgtccaaa 986  Q
    |||||||||||||||| ||||||  |  || ||||||||||||||||||||||||  |||||||  | ||||| | |||||||||||| |  ||||||||    
T  52868248 aattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaaatggtcacttcgtccaaa 52868149  T
Q  987 agccccgttagtggtgatga 1006  Q
    ||| |||||||||| |||||    
T  52868148 agctccgttagtggcgatga 52868129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 892 - 953
Target Start/End: Original strand, 39345589 - 39345652
Alignment:
Q  892 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||||||||||||  | | |||||||||||||||| ||||||||| ||||||||    
T  39345589 aattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatt 39345652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 867 - 944
Target Start/End: Original strand, 48645255 - 48645334
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 944  Q
    ||||||||||||| |||| | ||| |||||| ||||||| | ||||||  | ||||||||||||||||||||||||||||    
T  48645255 gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagt 48645334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 866 - 953
Target Start/End: Original strand, 43507166 - 43507255
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  43507166 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 43507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 319273 - 319361
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||| ||  | | |||||||||||||||||| | ||||||||||||||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatt 319361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 4173829 - 4173741
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  4173829 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 4173741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 33266099 - 33266011
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    |||||||| |||| |||| ||||| |||||| |||||||||| || ||  ||| |||||||||||||||||| | ||||| ||||||||    
T  33266099 gactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatt 33266011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 43508742 - 43508654
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 43508654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 43519424 - 43519512
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  43519424 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 43519512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 936
Target Start/End: Complemental strand, 320990 - 320918
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatc 936  Q
    |||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | ||||||||||||||||||    
T  320990 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatc 320918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Original strand, 33264382 - 33264470
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||| ||  | | |||||||||| ||||||| | ||||||||||||||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatt 33264470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 4e-22; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 919 - 1009
Target Start/End: Original strand, 9398714 - 9398807
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||| || |||||||||||  |||||||||||||||||||    
T  9398714 tgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgt 9398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 892 - 1009
Target Start/End: Original strand, 20523391 - 20523513
Alignment:
Q  892 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaa 986  Q
    |||||| ||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||||||||||||||| || |||||||||    
T  20523391 aattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 20523490  T
Q  987 agccccgttagtggtgatgatgt 1009  Q
    ||  | |||||||||||||||||    
T  20523491 agttctgttagtggtgatgatgt 20523513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 866 - 1006
Target Start/End: Complemental strand, 32439216 - 32439071
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    |||||||||||||| |||  |  || |||||||||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||    
T  32439216 tgactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 32439117  T
Q  962 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    ||||||||||||| || |||||||||||  | |||||| |||||||    
T  32439116 ccatcaaaatggtccctccgtccaaaagatctgttagtagtgatga 32439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 919 - 1009
Target Start/End: Complemental strand, 7373028 - 7372935
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||||||||||| |||||||| ||||||  ||| || |||||||||||||||| || |||||||||||| || ||||||||||||||||    
T  7373028 tgaattttgcgaaatatttatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtccaaaagctccattagtggtgatgatgt 7372935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 864 - 1006
Target Start/End: Original strand, 32516874 - 32517021
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagac 959  Q
    |||||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||| | ||||| ||||||||  | ||||  ||| | ||    
T  32516874 tttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatac 32516973  T
Q  960 gtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    |||||||||||| || || |||||||||||| ||||||||||||||||    
T  32516974 gtccatcaaaattgtccctccgtccaaaagctccgttagtggtgatga 32517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 919 - 1009
Target Start/End: Original strand, 10568453 - 10568546
Alignment:
Q  919 tgaattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||| ||||||||| |||||||| |||||||| ||  |||||| |||||||| ||||  |||||||||||| |||||||||||||||||||    
T  10568453 tgaatttagcgaaatatttatttagtccctgaattttacagacgtctatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 10568546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 866 - 1009
Target Start/End: Complemental strand, 13613707 - 13613559
Alignment:
Q  866 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 961  Q
    |||||||||||| | |||| | ||| |||||| ||||||||| ||||||  | | |||||||||||||||||| | ||||| ||||||  ||| ||||||    
T  13613707 tgactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 13613608  T
Q  962 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||| | || || |||||||||||  || ||||||||||||||||    
T  13613607 ccatcaaattagtccctccgtccaaaaggtccattagtggtgatgatgt 13613559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 867 - 944
Target Start/End: Complemental strand, 10570008 - 10569929
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 944  Q
    ||||||||||||| |||| | ||| |||||||||||||| ||||||||  | |||||||||||| |||||||||||||||    
T  10570008 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagt 10569929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 868 - 1006
Target Start/End: Original strand, 11355223 - 11355366
Alignment:
Q  868 actaatacctcatattcattcttaaattttaaaaaatcggccaaatt-ttca-tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtcc 963  Q
    |||||||||||| |||| | ||| |||||||||||||||| ||||||  ||| ||||||||  |||||||||||| | | ||||||  ||| ||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  964 atcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    | ||||||||| || |||||||||||| ||| ||||||||||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatga 11355366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 921 - 1009
Target Start/End: Original strand, 6899541 - 6899632
Alignment:
Q  921 aattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtccac-cgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||| |||||||||||||||| ||| |||| ||  ||| ||||||||||||||||   ||||||||||| ||||||||| |||||||||    
T  6899541 aattttgtgaaatatctatttagtccctaaattttacagacatccatcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgt 6899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 956 - 1009
Target Start/End: Original strand, 7049850 - 7049904
Alignment:
Q  956 agacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    |||||||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  7049850 agacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgt 7049904  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 32518586 - 32518498
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  32518586 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatt 32518498  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 7371172 - 7371244
Alignment:
Q  864 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaata 934  Q
    ||||||||||||||||  ||| | ||| |||||| ||||||||||||||||  | | ||||||||||||||||    
T  7371172 tttgactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaata 7371244  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 953
Target Start/End: Complemental strand, 9400124 - 9400036
Alignment:
Q  867 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||| |||| | ||| |||||| ||||||| | ||||||  | | |||||||||||||||||||| ||||| || |||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaatt 9400036  T

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Target: scaffold1454 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 870 - 1006
Target Start/End: Original strand, 1266 - 1407
Alignment:
Q  870 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccat 965  Q
    |||||||||| || | | ||| ||||||||||||| ||  |||||  | ||||||||||  |||||||||||||||| ||||||  ||| ||||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  966 caaaatggt-ccaccgtccaaaagccccgttagtggtgatga 1006  Q
    ||||||||| || |||||||||||| ||||||||||||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttagtggtgatga 1407  T

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Target: scaffold0058 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 865 - 1009
Target Start/End: Original strand, 3292 - 3441
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 960  Q
    ||||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||  ||| |||||    
T  3292 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 3391  T
Q  961 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||| | || || |||||||||||  |||||| | ||||||||||    
T  3392 tccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 3441  T

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Target: scaffold0058; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 865 - 1009
Target Start/End: Original strand, 4464 - 4613
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 960  Q
    ||||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||  ||| |||||    
T  4464 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 4563  T
Q  961 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 1009  Q
    ||||||||| | || || |||||||||||  |||||| | ||||||||||    
T  4564 tccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 4613  T

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Target: scaffold0058; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 865 - 953
Target Start/End: Complemental strand, 14434 - 14344
Alignment:
Q  865 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 953  Q
    ||||||||||||||| |||| | ||| |||||| |||||||||| || ||  | | |||||||||||||||||| | ||||| ||||||||    
T  14434 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 14344  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 874 - 941
Target Start/End: Original strand, 436272 - 436341
Alignment:
Q  874 acctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 941  Q
    |||||| |||| ||||| |||||| ||||||| ||||||||  | ||| |||||||||||||||||||||    
T  436272 acctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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