View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16265_low_10 (Length: 452)
Name: NF16265_low_10
Description: NF16265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16265_low_10 |
 | |
|
| [»] chr1 (12 HSPs) |
| |
|
| [»] scaffold0400 (2 HSPs) |
| |
|
| [»] scaffold0365 (2 HSPs) |
| |
|
| [»] scaffold0289 (2 HSPs) |
| | |
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Alignment Details
Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 18 - 452
Target Start/End: Complemental strand, 15011629 - 15011195
Alignment:
| Q |
18 |
aagcatgaatctcatttgtgaaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttc |
117 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||| |||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
15011629 |
aagcatggatctcatttgtgaaagctttccgatttggcatttcttcattttgtaatgagtgaagtttcttcacagctacaacttgacctgtaggcagttc |
15011530 |
T |
|
| Q |
118 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
15011529 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgattatgttctcatacaccattttgccatca |
15011430 |
T |
|
| Q |
218 |
aagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtttgacaaaaaatgtatgatatcccatata |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||| |||||| |||||||| | |
|
|
| T |
15011429 |
aagctccatatttcaaatagattttcaatttgaaattcttgtacaggcttgtattcttttgtgcttgaagttcgacacaaaaggtatgagatcccataaa |
15011330 |
T |
|
| Q |
318 |
caattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatgattatgaaagttgccaccagatgttgagca |
417 |
Q |
| |
|
||||| ||||||||| || || ||||||||||||| || ||||||| |||||||||| ||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
15011329 |
caattaatgctaacagtagagggcctagagtgagggatagaactagcaccaaaattttgttagtcttatgataatgaaatttgccaccagatgttgagca |
15011230 |
T |
|
| Q |
418 |
aggctgcagaccagagacattaccacacaagcctt |
452 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||| |
|
|
| T |
15011229 |
aggctctaggccagagacattaccacataagcctt |
15011195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 18 - 452
Target Start/End: Complemental strand, 15037648 - 15037215
Alignment:
| Q |
18 |
aagcatgaatctcatttgtgaaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttc |
117 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || | || |
|
|
| T |
15037648 |
aagcatggatctcatttgtgaaagatttcagattagacatttcctcattttgtaatgaatgaagtttcttcacagctacaacttgacctgtgggcaactc |
15037549 |
T |
|
| Q |
118 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
15037548 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttcagtggcttcgataatgttctcatacaccattttgccatca |
15037449 |
T |
|
| Q |
218 |
aagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtttgacaaaaaatgtatgatatcccatata |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||| | |||||| |||||||| | |
|
|
| T |
15037448 |
aagctccatatttcaaatagattttcaatttgaaattcttgtgctggcttgtgttcttttgtgcttgaagttcgac-aaagaggtatgagatcccataaa |
15037350 |
T |
|
| Q |
318 |
caattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatgattatgaaagttgccaccagatgttgagca |
417 |
Q |
| |
|
|||| |||||||||| || || || |||||||||| || ||||||| |||||||||| ||||| |||||| |||||||| ||||||| ||||||||||| |
|
|
| T |
15037349 |
caatcaatgctaacaatagagggccgagagtgagggatagaactagcaccaaaattttgttagtattatgactatgaaaggtgccacccgatgttgagca |
15037250 |
T |
|
| Q |
418 |
aggctgcagaccagagacattaccacacaagcctt |
452 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||| |
|
|
| T |
15037249 |
aggctctaggccagagacattaccacataagcctt |
15037215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 18 - 450
Target Start/End: Complemental strand, 15017744 - 15017312
Alignment:
| Q |
18 |
aagcatgaatctcatttgtgaaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||| | || |
|
|
| T |
15017744 |
aagcatgaatctcatttgtgaaagctttcatattagacatttcttcattttgtaataaatgaagtttcttcacagctacaacttgacctgaaggcaactc |
15017645 |
T |
|
| Q |
118 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtca |
217 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
15017644 |
tgctttgtaaacacttgcatgtcctccaaccccaatgagatgtttgttgtcaaaatcttccgtggcttcgattatgttctcatacaccattttgccatca |
15017545 |
T |
|
| Q |
218 |
aagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtttgacaaaaaatgtatgatatcccatata |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||| |||||||| | |
|
|
| T |
15017544 |
aagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgtattcttctgtgcttgaagttcgacaaaaaaagtatgagatcccataaa |
15017445 |
T |
|
| Q |
318 |
caattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatgattatgaaagttgccaccagatgttgagca |
417 |
Q |
| |
|
||||| ||||||||| || |||||||||||||| | || ||||||| || ||||||| || ||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
15017444 |
caattaatgctaacagtagaggacctagagtgagtgatagaactagcacccaaattttgtttgtcttatgattatgaaacttgccaccagatattgagca |
15017345 |
T |
|
| Q |
418 |
aggctgcagaccagagacattaccacacaagcc |
450 |
Q |
| |
|
||||| || ||||||| ||||||||||||||| |
|
|
| T |
15017344 |
aggctctaggccagagatattaccacacaagcc |
15017312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 18 - 452
Target Start/End: Complemental strand, 15002736 - 15002302
Alignment:
| Q |
18 |
aagcatgaatctcatttgtgaaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttc |
117 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||| |||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
15002736 |
aagcatggatctcatttgtgaaagctttcctatttggcatttcttcattttgtaatgagtgaagtttcttcacagctacaacttgacctgtaggcagttc |
15002637 |
T |
|
| Q |
118 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||| |
|
|
| T |
15002636 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgattatgttctcgtacaccatttttccatca |
15002537 |
T |
|
| Q |
218 |
aagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtttgacaaaaaatgtatgatatcccatata |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||| |||||||| | |
|
|
| T |
15002536 |
aagctccatatttcaaatagattttcaattttcaattcttgtgcaggcttgtattcttttgtgcttgaagttcgacaaaaaaggtatgagatcccataaa |
15002437 |
T |
|
| Q |
318 |
caattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatgattatgaaagttgccaccagatgttgagca |
417 |
Q |
| |
|
|||| |||||||||| || || || |||||||||| || ||||||| |||||||||| ||||| |||||| |||||||| ||||||| ||||||||||| |
|
|
| T |
15002436 |
caatcaatgctaacaatagagggccgagagtgagggatagaactagcaccaaaattttgttagtattatgactatgaaaggtgccacccgatgttgagca |
15002337 |
T |
|
| Q |
418 |
aggctgcagaccagagacattaccacacaagcctt |
452 |
Q |
| |
|
||||| || ||||| ||||||||||||||||||| |
|
|
| T |
15002336 |
aggctctaggccagaaacattaccacacaagcctt |
15002302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 18 - 452
Target Start/End: Complemental strand, 15033081 - 15032653
Alignment:
| Q |
18 |
aagcatgaatctcatttgtgaaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttc |
117 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || | || |
|
|
| T |
15033081 |
aagcatggatctcatttgtgaaagctttcagattaggcatttcttcattttgtaatgaatgaagtttcttcacagctacaacttgacctgtgggcaactc |
15032982 |
T |
|
| Q |
118 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtca |
217 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||| |||||||||||||| ||| |
|
|
| T |
15032981 |
tgctttgtaaacacttccatgtcctccaaccccaaggagatgcttgtcgtcaaaatcttcagtggcttcgattatgttctcgtacaccattttgccatca |
15032882 |
T |
|
| Q |
218 |
aagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtttgacaaaaaatgtatgatatcccatata |
317 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| || |||| |||| |||||| ||| | |
|
|
| T |
15032881 |
aagctccatatttcaaacagattttcaatttgaaattcttgtgcaggcttgtattcttttgcgcttgaaattcgacacaaaaggtatgagatc------a |
15032788 |
T |
|
| Q |
318 |
caattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatgattatgaaagttgccaccagatgttgagca |
417 |
Q |
| |
|
||||| ||||||||| || || ||||||||||||| || ||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
15032787 |
caattaatgctaacagtagagggcctagagtgagggatagaactagcaccaaaattttgttagtcttatgattatgaaatttgccaccagatgttgagca |
15032688 |
T |
|
| Q |
418 |
aggctgcagaccagagacattaccacacaagcctt |
452 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||| |
|
|
| T |
15032687 |
aggctctaggccagagacattaccacataagcctt |
15032653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 18 - 452
Target Start/End: Original strand, 14532228 - 14532662
Alignment:
| Q |
18 |
aagcatgaatctcatttgtgaaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttc |
117 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||| ||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||| | || |
|
|
| T |
14532228 |
aagcatggatctcatttgtgaatgctttcagattagacatttcttcattttgtaatgagtgaagtttcttcacagcaacaacttgacctgtaggcaactc |
14532327 |
T |
|
| Q |
118 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtca |
217 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| || ||| |
|
|
| T |
14532328 |
tgctttgtaaacacttccatgccctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatggtctcgtacaccatttttccatca |
14532427 |
T |
|
| Q |
218 |
aagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtttgacaaaaaatgtatgatatcccatata |
317 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||||||| ||| | |||| ||||||||||||||||||||||||||||| |||||| ||||| || |
|
|
| T |
14532428 |
aagctccatattgcaaatagattttcagtttgaaattcttctgcgtggttgtcttcttttgtgcttgaagtttgacaaaaaaggtatgagatcccgtaag |
14532527 |
T |
|
| Q |
318 |
caattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatgattatgaaagttgccaccagatgttgagca |
417 |
Q |
| |
|
||| |||| ||||| || | ||||||||||||||||||||||||| ||||||| || ||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
14532528 |
caaaaaatgccaacaatagagtacctagagtgaggggtaaaactagcaccaaaatattgctagtcttatgactatgaaagttgccacctgatgttgagca |
14532627 |
T |
|
| Q |
418 |
aggctgcagaccagagacattaccacacaagcctt |
452 |
Q |
| |
|
| | || ||||||||||||||||||||||||| |
|
|
| T |
14532628 |
acacactaggccagagacattaccacacaagcctt |
14532662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 63 - 452
Target Start/End: Original strand, 14522152 - 14522541
Alignment:
| Q |
63 |
cattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgctt |
162 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||| ||||||||||| || | ||||||||||||||| |||||||| |||||||||| ||||||| ||| |
|
|
| T |
14522152 |
catttggtagtgaatggagtttcttcacagctaccacttgacctgttggcaactctgctttgtaaacacttccatgtactccaaccccgatgagattctt |
14522251 |
T |
|
| Q |
163 |
gttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgca |
262 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||||||||||| ||||||||||||| |||||||||||| | || |
|
|
| T |
14522252 |
gttgtcaaaatcttctgtggcttcgatgatattctcatacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctaca |
14522351 |
T |
|
| Q |
263 |
ggcttgttttcttttgtgcttgaagtttgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaacta |
362 |
Q |
| |
|
|||||| |||||||||||||||||| |||||| |||||| |||||||| |||| | |||||||||| | || ||||||||||||| |||||||| |
|
|
| T |
14522352 |
tgcttgtcttcttttgtgcttgaagtgcaacaaaattggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaacta |
14522451 |
T |
|
| Q |
363 |
gctccaaaattttattagtcttatgattatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctt |
452 |
Q |
| |
|
|| |||||||||| ||||| |||||| |||| ||||| ||||| |||||||||||||||| || |||||||||||||| |||||||||| |
|
|
| T |
14522452 |
gcaccaaaattttgttagttttatgactatggaagtttccacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctt |
14522541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 38 - 244
Target Start/End: Complemental strand, 14483360 - 14483154
Alignment:
| Q |
38 |
aaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccat |
137 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| | ||||||||||||||| |||||| |
|
|
| T |
14483360 |
aaagctttcagattggacatttctccattttgtaatgaatggagtttcttcacagctacaacctgtcctgtaggcaactctgctttgtaaacacttccat |
14483261 |
T |
|
| Q |
138 |
gtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatag |
237 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | ||||| ||||||||| |||||| |
|
|
| T |
14483260 |
gtcctccaaccccaatgagatgcttgttgtcaaaatcttttgtggcttcgataatgttctcgtacaccatttttcaatcaaaactccatattgaaaatag |
14483161 |
T |
|
| Q |
238 |
attttca |
244 |
Q |
| |
|
||||||| |
|
|
| T |
14483160 |
attttca |
14483154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 41 - 244
Target Start/End: Complemental strand, 14468409 - 14468206
Alignment:
| Q |
41 |
gctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtc |
140 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |
|
|
| T |
14468409 |
gctttcagattggacatttctccattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggcaactctgctttgtaaacacttccatgtc |
14468310 |
T |
|
| Q |
141 |
ctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagatt |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| | |||||| |||||||| ||||| || ||||| ||||||||| ||||||||| |
|
|
| T |
14468309 |
ctccaaccccaatgagatgcttgttgtcaaactcttctgtggcttcaacaatgttttcatacacaatttttccatcaaaactccatattgaaaatagatt |
14468210 |
T |
|
| Q |
241 |
ttca |
244 |
Q |
| |
|
|||| |
|
|
| T |
14468209 |
ttca |
14468206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 38 - 289
Target Start/End: Complemental strand, 14504591 - 14504340
Alignment:
| Q |
38 |
aaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccat |
137 |
Q |
| |
|
|||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| | ||||||||||||||| |||||| |
|
|
| T |
14504591 |
aaagctttcaaattggacatttctccattttgtaatgaatggagtttcttcacagctacaacctgtcctgtaggcaactctgctttgtaaacacttccat |
14504492 |
T |
|
| Q |
138 |
gtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatag |
237 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||| |||||||||||||| | ||| || |||||||||||||| || ||||| ||||||||| |||||| |
|
|
| T |
14504491 |
gtcctccaaccccgatgagatgtttgttgtcaaactcttctgtggcttctacaatattttcatacaccatttttccatcaaaactccatattgaaaatag |
14504392 |
T |
|
| Q |
238 |
attttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtt |
289 |
Q |
| |
|
||||||| | || |||||| |||| |||| |||||||||| | |||||| |
|
|
| T |
14504391 |
attttcagtgtgtgattcttctgcaaccttggattcttttgtgttcgaagtt |
14504340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 63 - 206
Target Start/End: Complemental strand, 15041171 - 15041025
Alignment:
| Q |
63 |
cattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagat---g |
159 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||| |||||||| ||||| | |||||||||||| || |||||||| |||||||||||||||||| |
|
|
| T |
15041171 |
catttggtagtgaatggagtttcttcacagctaccacttgaccagtaggcaactctgctttgtaatcacttccatgtactccaaccccaatgagattgat |
15041072 |
T |
|
| Q |
160 |
cttgttgtcaaaatcttctgtggcttcgataatgttctcatacacca |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
15041071 |
cttgctgtcaaaatcttcagtggcttcgatgatattctcatacacca |
15041025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 15041001 - 15040939
Alignment:
| Q |
390 |
tatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctt |
452 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||| |
|
|
| T |
15041001 |
tatgaaagttgccaccagatgttgagcaatgctctaggccagagacattaccacacaagcctt |
15040939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 18 - 452
Target Start/End: Complemental strand, 13417 - 12974
Alignment:
| Q |
18 |
aagcatgaatctcatttgtgaaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttc |
117 |
Q |
| |
|
||||||| |||||||| |||| ||||||| |||| ||||||| |||| || |||| |||| |||||||||||||||||||||||||||| ||| | || |
|
|
| T |
13417 |
aagcatggatctcattattgaatgctttcatattagacatttcttcatgttctaataaatgaagtttcttcacagctacaacttgacctgaaggcaactc |
13318 |
T |
|
| Q |
118 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||| |
|
|
| T |
13317 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgattatgttctcatataccatttttccatca |
13218 |
T |
|
| Q |
218 |
aagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtttgacaaaaaatgtatgatatcccatata |
317 |
Q |
| |
|
||||||||| || |||| ||||||||| |||||||||||| || |||||||| ||||||| | |||||||| || | |||| |||||| | |||||| | |
|
|
| T |
13217 |
aagctccatgttgcaaagagattttcagtttgaaattcttctgtaggcttgtattctttttttcttgaagtgtggtagaaaaggtatgagaacccataaa |
13118 |
T |
|
| Q |
318 |
caattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatga---------ttatgaaagttgccaccaga |
408 |
Q |
| |
|
||| | |||||||||| || | || |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||| || |
|
|
| T |
13117 |
caaataatgctaacaatagagttccaagagtgaggggtaaaactagatccaaaattttgttagtcttatgactatgaaagttatgaaagtttccacctga |
13018 |
T |
|
| Q |
409 |
tgttgagcaaggctgcagaccagagacattaccacacaagcctt |
452 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
13017 |
tgttgagcaaggctctagaccagagacattaccacacaagcctt |
12974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 26 - 422
Target Start/End: Complemental strand, 7109 - 6713
Alignment:
| Q |
26 |
atctcatttgtgaaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgt |
125 |
Q |
| |
|
|||||| ||| ||||||||||||||| || | || |||||||||||||||||||||||||||| ||||||||||| ||||| || | |||||||||| |
|
|
| T |
7109 |
atctcacttgcgaaagctttcagattggacgtctctccattttgtaatgaatggagtttcttcaccgctacaacttgtcctgtggggaactctgctttgt |
7010 |
T |
|
| Q |
126 |
aaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctcca |
225 |
Q |
| |
|
||||| |||| |||||||| | |||||||||||||||||||||||| ||||| || ||||| | ||||||||||||||||| ||| || ||||||||||| |
|
|
| T |
7009 |
aaacacttccgtgtcctcctatcccaatgagatgcttgttgtcaaactcttcagttgcttcaacaatgttctcatacaccaattttccatcaaagctcca |
6910 |
T |
|
| Q |
226 |
tatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtttgacaaaaaatgtatgatatcccatatacaattgat |
325 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| |||| |||| | |||| | ||||| | || | || |
|
|
| T |
6909 |
tattgcaaatagattttcagtttgaaattctcctgcagtcttgtattcttttgtgcttgaagttcgacataaaaggcatgagaggccataaagaaataat |
6810 |
T |
|
| Q |
326 |
gctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatgattatgaaagttgccaccagatgttgagcaaggct |
422 |
Q |
| |
|
||| |||| || | |||||||||| ||||||||| | | ||||||| | |||||||||||| |||||||||| ||||| ||||||||||||||| |
|
|
| T |
6809 |
gctgacaatagagtgcctagagtgatgggtaaaacaaccaccaaaatgtgtttagtcttatgactatgaaagttaccacctaatgttgagcaaggct |
6713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 18 - 452
Target Start/End: Complemental strand, 14060 - 13617
Alignment:
| Q |
18 |
aagcatgaatctcatttgtgaaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttc |
117 |
Q |
| |
|
||||||| |||||||| |||| ||||||| |||| ||||||| |||| || |||| |||| |||||||||||||||||||||||||||| ||| | || |
|
|
| T |
14060 |
aagcatggatctcattattgaatgctttcatattagacatttcttcatgttctaataaatgaagtttcttcacagctacaacttgacctgaaggcaactc |
13961 |
T |
|
| Q |
118 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||| |
|
|
| T |
13960 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgattatgttctcatataccatttttccatca |
13861 |
T |
|
| Q |
218 |
aagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtttgacaaaaaatgtatgatatcccatata |
317 |
Q |
| |
|
||||||||| || |||| ||||||||| |||||||||||| || |||||||| ||||||| | |||||||| || | |||| |||||| | |||||| | |
|
|
| T |
13860 |
aagctccatgttgcaaagagattttcagtttgaaattcttctgtaggcttgtattctttttttcttgaagtgtggtagaaaaggtatgagaacccataaa |
13761 |
T |
|
| Q |
318 |
caattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatga---------ttatgaaagttgccaccaga |
408 |
Q |
| |
|
||| | |||||||||| || | || |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||| || |
|
|
| T |
13760 |
caaataatgctaacaatagagttccaagagtgaggggtaaaactagatccaaaattttgttagtcttatgactatgaaagttatgaaagtttccacctga |
13661 |
T |
|
| Q |
409 |
tgttgagcaaggctgcagaccagagacattaccacacaagcctt |
452 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
13660 |
tgttgagcaaggctctagaccagagacattaccacacaagcctt |
13617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 26 - 422
Target Start/End: Complemental strand, 7753 - 7357
Alignment:
| Q |
26 |
atctcatttgtgaaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgt |
125 |
Q |
| |
|
|||||| ||| ||||||||||||||| || | || |||||||||||||||||||||||||||| ||||||||||| ||||| || | |||||||||| |
|
|
| T |
7753 |
atctcacttgcgaaagctttcagattggacgtctctccattttgtaatgaatggagtttcttcaccgctacaacttgtcctgtggggaactctgctttgt |
7654 |
T |
|
| Q |
126 |
aaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctcca |
225 |
Q |
| |
|
||||| |||| |||||||| | |||||||||||||||||||||||| ||||| || ||||| | ||||||||||||||||| ||| || ||||||||||| |
|
|
| T |
7653 |
aaacacttccgtgtcctcctatcccaatgagatgcttgttgtcaaactcttcagttgcttcaacaatgttctcatacaccaattttccatcaaagctcca |
7554 |
T |
|
| Q |
226 |
tatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtttgacaaaaaatgtatgatatcccatatacaattgat |
325 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| |||| |||| | |||| | ||||| | || | || |
|
|
| T |
7553 |
tattgcaaatagattttcagtttgaaattctcctgcagtcttgtattcttttgtgcttgaagttcgacataaaaggcatgagaggccataaagaaataat |
7454 |
T |
|
| Q |
326 |
gctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatgattatgaaagttgccaccagatgttgagcaaggct |
422 |
Q |
| |
|
||| |||| || | |||||||||| ||||||||| | | ||||||| | |||||||||||| |||||||||| ||||| ||||||||||||||| |
|
|
| T |
7453 |
gctgacaatagagtgcctagagtgatgggtaaaacaaccaccaaaatgtgtttagtcttatgactatgaaagttaccacctaatgttgagcaaggct |
7357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 123; Significance: 5e-63; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 67 - 289
Target Start/End: Complemental strand, 17027469 - 17027247
Alignment:
| Q |
67 |
ttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttg |
166 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||| | ||||||| ||||||| ||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
17027469 |
ttgtaatgaatggagtttcttcacagctacaacttgtccaataggcaactctgcttggtaaacacttccatgacctccaaccccaatgagatacttgttg |
17027370 |
T |
|
| Q |
167 |
tcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggct |
266 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||||| | |||||||||| ||| ||||||||| || || |||| |
|
|
| T |
17027369 |
tcaaactcttcggtggcttcgataatgttctcatacaccatttttccatcaaagctccatactgcaaatagattatcagtttgaaattattctgtcggct |
17027270 |
T |
|
| Q |
267 |
tgttttcttttgtgcttgaagtt |
289 |
Q |
| |
|
||| ||||||||| |||||||| |
|
|
| T |
17027269 |
tgtattcttttgtcattgaagtt |
17027247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 67 - 289
Target Start/End: Complemental strand, 17557961 - 17557739
Alignment:
| Q |
67 |
ttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttg |
166 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||| | ||||||| ||||||| ||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
17557961 |
ttgtaatgaatggagtttcttcacagctacaacttgtccaataggcaactctgcttggtaaacacttccatgacctccaaccccaatgagatacttgttg |
17557862 |
T |
|
| Q |
167 |
tcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggct |
266 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||||| | |||||||||| ||| ||||||||| || || |||| |
|
|
| T |
17557861 |
tcaaactcttcggtggcttcgataatgttctcatacaccatttttccatcaaagctccatactgcaaatagattatcagtttgaaattattctgtcggct |
17557762 |
T |
|
| Q |
267 |
tgttttcttttgtgcttgaagtt |
289 |
Q |
| |
|
||| ||||||||| |||||||| |
|
|
| T |
17557761 |
tgtattcttttgtcattgaagtt |
17557739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0289
Description:
Target: scaffold0289; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 73 - 228
Target Start/End: Original strand, 5106 - 5261
Alignment:
| Q |
73 |
tgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaa |
172 |
Q |
| |
|
|||||||||||| || ||||| || |||||||||| || | ||||||||||||||| |||| || |||| | |||||||||||||||| ||||| |
|
|
| T |
5106 |
tgaatggagttttttaacagcaactacttgacctgagggcaactctgctttgtaaacacttccttgcgctcctagtccaatgagatgcttgtcatcaaac |
5205 |
T |
|
| Q |
173 |
tcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatat |
228 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
5206 |
tcttctgtggcttcaataatgttctcatacaccattttcccatcaaaactccatat |
5261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 73 - 228
Target Start/End: Original strand, 13939 - 14094
Alignment:
| Q |
73 |
tgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaa |
172 |
Q |
| |
|
|||||||||||| || ||||| || |||||||||| || | ||||||||||||||| |||| || |||| | |||||||||||||||| ||||| |
|
|
| T |
13939 |
tgaatggagttttttaacagcaactacttgacctgagggcaactctgctttgtaaacacttccttgcgctcctagtccaatgagatgcttgtcatcaaac |
14038 |
T |
|
| Q |
173 |
tcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatat |
228 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
14039 |
tcttctgtggcttcaataatgttctcatacaccattttcccatcaaaactccatat |
14094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 73 - 242
Target Start/End: Original strand, 17825636 - 17825805
Alignment:
| Q |
73 |
tgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaa |
172 |
Q |
| |
|
||||||||| || || ||||| || ||||||||||| || |||||||||||||||| ||||||| |||||||| || |||||||| || | |||||| |
|
|
| T |
17825636 |
tgaatggagctttttaacagcaactacttgacctgtgtctaattctgctttgtaaacacttccatgccctccaactccgatgagatgtttatcatcaaaa |
17825735 |
T |
|
| Q |
173 |
tcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagatttt |
242 |
Q |
| |
|
|| |||||||||| ||||| |||||||||||||||||| | ||||| |||||||| ||||||||||| |
|
|
| T |
17825736 |
tcgtctgtggcttgaataatattctcatacaccattttgtcatcaaaactccatatggtaaatagatttt |
17825805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 242
Target Start/End: Original strand, 15676564 - 15676783
Alignment:
| Q |
23 |
tgaatctcatttgtgaaagctttcagattaaacatttcatcattttgtaatgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctt |
122 |
Q |
| |
|
||||||||||||| |||| || |||| ||| |||| |||||| || |||||||| ||| || ||||| || |||||||||| | | | ||||||| |
|
|
| T |
15676564 |
tgaatctcatttgcgaaacagtttagatcaaaattttcctcatttgttactgaatggaattttttaacagcaactacttgacctgaatgcaaatctgctt |
15676663 |
T |
|
| Q |
123 |
tgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagct |
222 |
Q |
| |
|
||||||| ||||| || |||| || |||||||||||||||| ||||| |||| ||||||||| || |||||||||||||||||||| || ||||| || |
|
|
| T |
15676664 |
tgtaaacttttccttgcgctcctactccaatgagatgcttgtcatcaaactcttatgtggcttcaattatgttctcatacaccattttcccatcaaaact |
15676763 |
T |
|
| Q |
223 |
ccatatttcaaatagatttt |
242 |
Q |
| |
|
||||||| ||||| ||||| |
|
|
| T |
15676764 |
ccatattgtaaatacatttt |
15676783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 242
Target Start/End: Original strand, 15664780 - 15664949
Alignment:
| Q |
73 |
tgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaa |
172 |
Q |
| |
|
|||||||||||| || ||||| || ||||||||||| || | | ||||||||||||| |||| || |||| | |||||||||||||||| ||||| |
|
|
| T |
15664780 |
tgaatggagttttttaacagcaactacttgacctgtgggcaactttgctttgtaaacacttccttgcgctcctgctccaatgagatgcttgtcatcaaac |
15664879 |
T |
|
| Q |
173 |
tcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagatttt |
242 |
Q |
| |
|
||||| || ||||| ||||||||||||||||||||||| || ||||| ||||||||| ||||| ||||| |
|
|
| T |
15664880 |
tcttccgttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacatttt |
15664949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 229
Target Start/End: Complemental strand, 14606478 - 14606322
Alignment:
| Q |
73 |
tgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaa |
172 |
Q |
| |
|
||||||||| || |||||||| || ||||||||||| | | | ||||||||| ||| ||||||| |||||||| ||||||||||| || | |||||| |
|
|
| T |
14606478 |
tgaatggagctttttcacagcaactacttgacctgtgtgcaactttgctttgtagacacttccatgccctccaactccaatgagatgtttttcatcaaaa |
14606379 |
T |
|
| Q |
173 |
tcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatatt |
229 |
Q |
| |
|
|||||||||||||| | |||||||||||||| | ||| || |||||| |||||||| |
|
|
| T |
14606378 |
tcttctgtggcttccaaaatgttctcatacaaaaattttccatcaaagttccatatt |
14606322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 229
Target Start/End: Complemental strand, 16025655 - 16025499
Alignment:
| Q |
73 |
tgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaa |
172 |
Q |
| |
|
||||||||| || |||||||| || ||||||||||| | | | ||||||||| ||| ||||||| |||||||| ||||||||||| || | |||||| |
|
|
| T |
16025655 |
tgaatggagctttttcacagcaactacttgacctgtgtgcaactttgctttgtagacacttccatgccctccaactccaatgagatgtttttcatcaaaa |
16025556 |
T |
|
| Q |
173 |
tcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatatt |
229 |
Q |
| |
|
|||||||||||||| | |||||||||||||| | ||| || |||||| |||||||| |
|
|
| T |
16025555 |
tcttctgtggcttccaaaatgttctcatacaaaaattttccatcaaagttccatatt |
16025499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 242
Target Start/End: Complemental strand, 17849102 - 17848933
Alignment:
| Q |
73 |
tgaatggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaa |
172 |
Q |
| |
|
|||||||||||| |||||||| || ||||||||||| | | |||||||||||| |||| || ||||| || || |||||||| || | |||||| |
|
|
| T |
17849102 |
tgaatggagttttttcacagccactacttgacctgtgtccaacacggctttgtaaacacttccctgccctcctactccgatgagatgtttatcatcaaaa |
17849003 |
T |
|
| Q |
173 |
tcttctgtggcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagatttt |
242 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| || ||||| |||||||| ||||||||||| |
|
|
| T |
17849002 |
tcttctgtggcttcaataatactctcatacaccatttttccatcaaaactccatatggtaaatagatttt |
17848933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 16173128 - 16172994
Alignment:
| Q |
76 |
atggagtttcttcacagctacaacttgacctgtaggtagttctgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatct |
175 |
Q |
| |
|
|||||| || |||||||| || ||||||||||| ||| ||||||||||||||| |||| || |||||||| ||||| |||| |||| ||||||||| |
|
|
| T |
16173128 |
atggagctttttcacagcaactacttgacctgtgtgtaactctgctttgtaaacacttccttgccctccaactccaataagatatttgtcatcaaaatct |
16173029 |
T |
|
| Q |
176 |
tctgtggcttcgataatgttctcatacaccatttt |
210 |
Q |
| |
|
| ||||||||| | |||||||| || |||||||| |
|
|
| T |
16173028 |
tgtgtggcttccaagatgttctcgtagaccatttt |
16172994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 16103418 - 16103293
Alignment:
| Q |
118 |
tgctttgtaaacatttccatgtcctccaaccccaatgagatgcttgttgtcaaaatcttctgtggcttcgataatgttctcatacaccattttgccgtca |
217 |
Q |
| |
|
||||||||| ||| ||||||| || ||||| ||||| ||||| || | |||||||||||||||||||| | |||||| ||| |||| ||||| || ||| |
|
|
| T |
16103418 |
tgctttgtagacacttccatgccccccaacaccaattagatgtttctcatcaaaatcttctgtggcttccacaatgttttcaaacacaatttttccatca |
16103319 |
T |
|
| Q |
218 |
aagctccatatttcaaatagattttc |
243 |
Q |
| |
|
||| |||||||| ||||| |||||| |
|
|
| T |
16103318 |
aagttccatattgtaaatacattttc |
16103293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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