View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16265_low_36 (Length: 265)
Name: NF16265_low_36
Description: NF16265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16265_low_36 |
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Alignment Details
Target: chr4 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 49858780 - 49858979
Alignment:
| Q |
1 |
taattgtcacacttttattaccaaattaactttaacatcattacaataaatgttaaacgnnnnnnntattgacttcaaagaggtgtaaaagagggttgaa |
100 |
Q |
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| T |
49858780 |
taattgtcacacttttattaccaaattaactttaacatcattacaataaatgttaaacgaaaaaaatattgacttcaaagaggtgtaaaagagggttcaa |
49858879 |
T |
|
| Q |
101 |
ttaagagtgttcaatcctttgctctttttatcaaaaaggggttgttggatcatacaagtctaatgtatcttatggtgaaaaaccaataactaaatcttgt |
200 |
Q |
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| T |
49858880 |
ttaagagtgttcaatcctttgctctttttatcaaaaaggggttgttggatcatacaaatctaatgtattttatggtgaaaaaccaataactaaatcttgt |
49858979 |
T |
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