View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16266_high_6 (Length: 302)
Name: NF16266_high_6
Description: NF16266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16266_high_6 |
 | |
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| [»] chr8 (3 HSPs) |
| |
|
| [»] chr6 (32 HSPs) |
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| [»] chr5 (2 HSPs) |
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| [»] scaffold0288 (1 HSPs) |
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| [»] chr3 (1 HSPs) |
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| [»] scaffold0477 (1 HSPs) |
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| [»] scaffold0475 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 37 - 302
Target Start/End: Complemental strand, 16686413 - 16686148
Alignment:
| Q |
37 |
gtcacttaggtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||| |
|
|
| T |
16686413 |
gtcacttaggtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtctcgggtcttcgtccaccttca |
16686314 |
T |
|
| Q |
137 |
tcttcagttcaattatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtc |
236 |
Q |
| |
|
| | ||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16686313 |
tttgcagttcaattatctttttcctcatcttctttcctttctctcccaccatcaattcattgaccaatttctccacctcatctctcttcacattggtgtc |
16686214 |
T |
|
| Q |
237 |
aatttccatgccaatctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
16686213 |
aatttccatgccaatctcccattcattgcaaatatatctgcattttgctggctgatcagcaaaaaa |
16686148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 37 - 302
Target Start/End: Complemental strand, 20863989 - 20863724
Alignment:
| Q |
37 |
gtcacttaggtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttca |
136 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||| |||||||||| ||||||||||| ||||||| ||| | ||||||||||| || || |||||| |
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|
| T |
20863989 |
gtcacttaagtttgattttgtttaagcaacacctccttaatcactttgtccaagttcatatatgaaccaccttccggtcttgtgtcctcctctgccttct |
20863890 |
T |
|
| Q |
137 |
tcttcagttcaattatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtc |
236 |
Q |
| |
|
|||||| ||| || |||||| | ||||| || |||||||||||||||| |||| |||||| |||| | |||||||||| |||||||| ||||||||||| |
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|
| T |
20863889 |
tcttcaactcatttgtcttttgcctcatcctccttcctttctctcccaccatcaattcatttaccagcatctccacctcctctctcttgacattggtgtc |
20863790 |
T |
|
| Q |
237 |
aatttccatgccaatctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
|||||| || ||||||| ||||| |||||||| ||| ||||||||| ||||||||||||||||| |
|
|
| T |
20863789 |
aatttcgatcccaatctcccatttgttgcaaatgtatctgcagtttgtcggctgatcagcaaaaaa |
20863724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 51 - 302
Target Start/End: Original strand, 1674226 - 1674477
Alignment:
| Q |
51 |
attttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaatt |
150 |
Q |
| |
|
||||||||||||||| || ||| |||||||||| |||||||||||||||||||||||||| ||||| |||| || || |||||| |||||| ||| || |
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|
| T |
1674226 |
attttgtttaagcaacacttccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttcttcttcaattccatg |
1674325 |
T |
|
| Q |
151 |
atctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaa |
250 |
Q |
| |
|
||||| | ||||||| ||||| ||||||||||| |||| |||||||| | |||||||| | |||||||||||||| || ||||||||||| |||| |
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|
| T |
1674326 |
gccttttgcctcatcttttttccattctctcccaccatcaattcattgataagcttctccaaaccctctctcttcacattcgtatcaatttccataccaa |
1674425 |
T |
|
| Q |
251 |
tctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||| ||||||||| |||||| || | ||||||| |||||||||||||||||| |
|
|
| T |
1674426 |
tcttccattcattacaaataaatctacagtttgttggctgatcagcaaaaaa |
1674477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 37 - 302
Target Start/End: Original strand, 4557111 - 4557376
Alignment:
| Q |
37 |
gtcacttaggtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| || || |||||| |
|
|
| T |
4557111 |
gtcacttaggtttgattttgtttaagcaaaacctccttaatcactttttccaaattcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttcg |
4557210 |
T |
|
| Q |
137 |
tcttcagttcaattatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtc |
236 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||||| ||| | |||| |||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
4557211 |
tcttcatctcaattatctttttccacatcttctttcctttctccccctccatcaattcattgaccaaattctctacctcatctctcttcacattggtgtc |
4557310 |
T |
|
| Q |
237 |
aatttccatgccaatctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4557311 |
aatttccatgccaatctcccatgtattgcaaatatatctgcagtttgctggctgatcagcaaaaaa |
4557376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 37 - 302
Target Start/End: Original strand, 4570958 - 4571223
Alignment:
| Q |
37 |
gtcacttaggtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttca |
136 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| || || |||||| |
|
|
| T |
4570958 |
gtcacttaggtgtgattttatttaagcaaaacctccttaatcactttttccaagttcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttct |
4571057 |
T |
|
| Q |
137 |
tcttcagttcaattatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtc |
236 |
Q |
| |
|
|||||| || ||||| |||||| |||||||||||||||| |||||||| |||| |||||||||||| ||||||||||||| |||||||||||| || || |
|
|
| T |
4571058 |
tcttcatctccattatatttttcctcatcttctttcctttatctcccaccatcaattcattgaccaaattctccacctcatttctcttcacattagtatc |
4571157 |
T |
|
| Q |
237 |
aatttccatgccaatctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||||| || ||||||| |||| |||||| |||||| | |||||||||||||||||||||||||| |
|
|
| T |
4571158 |
gatttcgattccaatctcccatgtattgcagatatatctacagtttgctggctgatcagcaaaaaa |
4571223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 43 - 298
Target Start/End: Original strand, 4585628 - 4585883
Alignment:
| Q |
43 |
taggtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttca |
142 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||| || || |||||| |||||| |
|
|
| T |
4585628 |
taggtttgattttatttaagcaaaacctccttaatcactttttccaagtttatgtatgaacaacctccaggtctcgtgtcctcctccgccttcttcttca |
4585727 |
T |
|
| Q |
143 |
gttcaattatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttc |
242 |
Q |
| |
|
|| ||| ||||| | ||||||||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||| |
|
|
| T |
4585728 |
actcgattgccttttgcctcatcttctttccattctctcccaccatcaattcattgaccaacttctccacctcctctctcttcacattggtgtcaacttc |
4585827 |
T |
|
| Q |
243 |
catgccaatctaccattcattgcaaatatatatgcagtttgctggctgatcagcaa |
298 |
Q |
| |
|
||| ||||||| |||||||||||||||| | | ||||||| |||||||||||||| |
|
|
| T |
4585828 |
catcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaa |
4585883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 46 - 302
Target Start/End: Complemental strand, 4613855 - 4613599
Alignment:
| Q |
46 |
gtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagtt |
145 |
Q |
| |
|
|||||||||||||| |||| ||||| | |||||||| ||||||||||| ||||||||||| || ||||| ||||| || || |||||| |||||| | |
|
|
| T |
4613855 |
gtttgattttgtttcagcagcacctcattgatcactttgtccaagttcatatatgaacaacctcctggtctcgtgtcctcctctgccttcttcttcaact |
4613756 |
T |
|
| Q |
146 |
caattatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccat |
245 |
Q |
| |
|
||||| ||||| | |||| |||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4613755 |
caattgccttttgcctcattttctttcctttctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccat |
4613656 |
T |
|
| Q |
246 |
gccaatctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||||| | |||||||||||| |||||| ||||||||||||||||||| || ||||| |
|
|
| T |
4613655 |
cccaatttcccattcattgcatatatatctgcagtttgctggctgatccgcgaaaaa |
4613599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 51 - 302
Target Start/End: Original strand, 4516321 - 4516572
Alignment:
| Q |
51 |
attttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaatt |
150 |
Q |
| |
|
||||||||| |||| |||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| || || |||||| |||||| ||| || |
|
|
| T |
4516321 |
attttgtttgagcagcacctccttaatcactttttccaagttcacatatgaacaaccacctggtcttgtgtcctcctctgccttcttcttcaattccatg |
4516420 |
T |
|
| Q |
151 |
atctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaa |
250 |
Q |
| |
|
||||| | |||||||||||||||| |||||||| || | |||||||| || |||||||||||| ||||||||||||||||| |||||||| |||| |
|
|
| T |
4516421 |
gccttttgcctcatcttctttcctttatctcccaccattaattcattgatcagcttctccacctcctctctcttcacattggtatcaatttctgctccaa |
4516520 |
T |
|
| Q |
251 |
tctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||| ||||||||||||||||||| |||| |||| |||||| ||||||||||| |
|
|
| T |
4516521 |
tctcccattcattgcaaatatatctgcaatttgttggctgctcagcaaaaaa |
4516572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 46 - 302
Target Start/End: Original strand, 4598166 - 4598422
Alignment:
| Q |
46 |
gtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagtt |
145 |
Q |
| |
|
|||||||| |||||||| || |||||| |||||||||| || |||||||||||||||||||| ||| |||| || || || || ||||||||||||| | |
|
|
| T |
4598166 |
gtttgattctgtttaagaaacacctccttaatcactttctctaagttcatgtatgaacaacctccaagtctcgtttcctcctccgccttcatcttcaaat |
4598265 |
T |
|
| Q |
146 |
caattatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccat |
245 |
Q |
| |
|
||||| |||||| | |||| ||||||||||| |||||| |||| ||| ||||||| |||||||||||| |||||||||||||| || ||||||| || |
|
|
| T |
4598266 |
caattgtcttttgcctcattttctttcctttatctcccgacatcaattcgttgaccagcttctccacctcctctctcttcacattagtttcaattttgat |
4598365 |
T |
|
| Q |
246 |
gccaatctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||| ||| ||||||| || ||||| |
|
|
| T |
4598366 |
tccaatctcccattcattgcaaatatatctgcagttggcttgctgatccgcgaaaaa |
4598422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 4480693 - 4480912
Alignment:
| Q |
51 |
attttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaatt |
150 |
Q |
| |
|
||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||| || || ||| || |||||| || || |
|
|
| T |
4480693 |
attttgtttaagcaagacctccttaatcactttgtccaagttcatgtatgaacaaccaccaggtcttgtgtcctcctctgccatcttcttcaactccatg |
4480792 |
T |
|
| Q |
151 |
atctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaa |
250 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| | || |||||||| ||| ||||||| || ||||||||||||||||| || ||||| | |||| |
|
|
| T |
4480793 |
gccttttgcttcatcttctttcctttctctcccaccaacaattcattgattaacctctccacatcttctctcttcacattggtatcgatttcgagtccaa |
4480892 |
T |
|
| Q |
251 |
tctaccattcattgcaaata |
270 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
4480893 |
tctcccattcattgcaaata |
4480912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 37 - 302
Target Start/End: Original strand, 4579418 - 4579683
Alignment:
| Q |
37 |
gtcacttaggtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttca |
136 |
Q |
| |
|
|||||||| ||| |||||||||| || || |||||| |||||||||| |||||||||||||||||||| || |||||||| ||||| || || ||||| |
|
|
| T |
4579418 |
gtcacttaagttcgattttgtttgagtaacacctccttaatcactttctccaagttcatgtatgaacagcctccaggtctcgtgtcctcctccaccttct |
4579517 |
T |
|
| Q |
137 |
tcttcagttcaattatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtc |
236 |
Q |
| |
|
|||||| |||||| ||||| | ||||||||||| ||||||||||||| |||| |||||| |||| |||||||||||| |||||||||||||| ||||| |
|
|
| T |
4579518 |
tcttcaactcaattgccttttgcctcatcttctttgctttctctcccaccatcaattcattaaccagcttctccacctcctctctcttcacattagtgtc |
4579617 |
T |
|
| Q |
237 |
aatttccatgccaatctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||||| || ||||| | |||| |||||| | |||| ||||| || |||| |||||||| ||||| |
|
|
| T |
4579618 |
gatttcaattccaattttccatgtattgcataaatatctgcagcttactgggtgatcagcgaaaaa |
4579683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 47 - 294
Target Start/End: Original strand, 4592227 - 4592474
Alignment:
| Q |
47 |
tttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttc |
146 |
Q |
| |
|
||||||||| ||||||||| |||||| | |||| ||| ||||||||||| ||||||||||| |||||||| |||| || || |||||| |||||| || |
|
|
| T |
4592227 |
tttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgttctcctctgccttcttcttcaactc |
4592326 |
T |
|
| Q |
147 |
aattatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatg |
246 |
Q |
| |
|
||| ||||||| ||||||||||||||||||||||||| |||| |||||||| | ||||||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
4592327 |
gattgcctttttcctcatcttctttcctttctctcccaccatcaattcattgataagtttctccacctcctctctctttacattcgtatcaatttccatc |
4592426 |
T |
|
| Q |
247 |
ccaatctaccattcattgcaaatatatatgcagtttgctggctgatca |
294 |
Q |
| |
|
||||||| |||||||||| ||||| | | ||||||| |||||||||| |
|
|
| T |
4592427 |
ccaatctcccattcattgtaaataagtctacagtttgttggctgatca |
4592474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 302
Target Start/End: Original strand, 4560495 - 4560757
Alignment:
| Q |
40 |
acttaggtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatct |
139 |
Q |
| |
|
||||| |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| |||||||| |||| | || ||||| ||| |
|
|
| T |
4560495 |
acttatgtttgattttgtttaagcaacacctccttaatcactttctccaagttcatgtatgaacaacctccaggtctcgtgtacacctccgcctttttct |
4560594 |
T |
|
| Q |
140 |
tcagttcaattatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaat |
239 |
Q |
| |
|
|||| || || ||||| | |||||||||||||||| |||| |||| ||||||||||| |||||||| || || ||||| ||||| || ||||| |
|
|
| T |
4560595 |
tcagctccatggccttttgcctcatcttctttcctttatctcaggacatcaattcattgaccagtttctccacgtcctccctctttacatttgtatcaat |
4560694 |
T |
|
| Q |
240 |
ttccatgccaatctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||| | ||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||| |
|
|
| T |
4560695 |
ttcgtttccaatcttccattcattgcaaatatatcttcagtttgctggctgatctgcaaaaaa |
4560757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 48 - 302
Target Start/End: Original strand, 4574305 - 4574559
Alignment:
| Q |
48 |
ttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttca |
147 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||| |||||||| ||||| | || ||||| ||||||| ||| |
|
|
| T |
4574305 |
ttgattttgtttaagcaacacctccttaatcactttctccaagtttgtgtatgaacaacctccaggtctcgtgtccacctccaccttcttcttcagctca |
4574404 |
T |
|
| Q |
148 |
attatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgc |
247 |
Q |
| |
|
|| |||| | |||||||||||||||| ||||| |||| ||||||||||| ||||||||||| || ||||| ||||| || || |||||| | | |
|
|
| T |
4574405 |
atggctttttgcctcatcttctttcctttatctccggacatcaattcattgaccagtttctccacctcctccctctttacattagtatcgatttcctttc |
4574504 |
T |
|
| Q |
248 |
caatctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||| | |||||| |
|
|
| T |
4574505 |
caatctcccattcattgcaaatatatctgcagtttgctggctgatccgaaaaaaa |
4574559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 48 - 299
Target Start/End: Original strand, 4563708 - 4563959
Alignment:
| Q |
48 |
ttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttca |
147 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||| ||| |||| ||| || | ||| |||||| ||| |
|
|
| T |
4563708 |
ttgattttgtttaagcaaaacctccttgatcactttgtccaagttcatgtatgaacaacctccagctctcgtgttttcctccactttcttcttcaactca |
4563807 |
T |
|
| Q |
148 |
attatctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgc |
247 |
Q |
| |
|
||| ||||| | ||||||||||||||||||||| |||| ||||||||| | ||||||||||| |||||||| ||||| || || |||||||| | |
|
|
| T |
4563808 |
attgccttttgccgcatcttctttcctttctctcctgacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcc |
4563907 |
T |
|
| Q |
248 |
caatctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaa |
299 |
Q |
| |
|
|||||| |||||||||| ||||| | | ||||||| |||||||||| |||| |
|
|
| T |
4563908 |
caatctcccattcattgtaaataagtctacagtttgttggctgatcaccaaa |
4563959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 299
Target Start/End: Complemental strand, 4267295 - 4267050
Alignment:
| Q |
54 |
ttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaattatc |
153 |
Q |
| |
|
||||||||||| |||||| |||| ||||| |||||||||||||||||| |||||||||||||||||| || || |||||| |||||| || | | |
|
|
| T |
4267295 |
ttgtttaagcatgacctccttaataactttgtccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcctcttcaactccaagaca |
4267196 |
T |
|
| Q |
154 |
tttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatct |
253 |
Q |
| |
|
|||| ||||||| | ||||||||||||||||| |||| ||||||||| |||||||| || ||||||||||||||||| || | ||||| | ||||||| |
|
|
| T |
4267195 |
ttttgcttcatcatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
4267096 |
T |
|
| Q |
254 |
accattcattgcaaatatatatgcagtttgctggctgatcagcaaa |
299 |
Q |
| |
|
|||||||| ||||||| || | ||||||| |||||||||| |||| |
|
|
| T |
4267095 |
cccattcatagcaaataaatctacagtttgttggctgatcaccaaa |
4267050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 3171744 - 3171960
Alignment:
| Q |
54 |
ttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaattatc |
153 |
Q |
| |
|
|||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| |||||| || || || |||||| |||||| || || | |
|
|
| T |
3171744 |
ttgtttaagcaagacctccttaatcactttatccaagttcatgtatgaacaaccaccaaatcttgtatcctcctctgccttcttcttcaactccatggcc |
3171843 |
T |
|
| Q |
154 |
tttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatct |
253 |
Q |
| |
|
||| | ||||||||||||||||||||||||| |||| ||| |||| || ||||| ||||| ||||||| |||||||| ||||||||||| ||||||| |
|
|
| T |
3171844 |
ctttgcctcatcttctttcctttctctcccaccatcaattcgttgatcagtttctctacctcccctctctttacattggtatcaatttccatcccaatct |
3171943 |
T |
|
| Q |
254 |
accattcattgcaaata |
270 |
Q |
| |
|
|||||| | ||||||| |
|
|
| T |
3171944 |
tccattcttggcaaata |
3171960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 299
Target Start/End: Complemental strand, 4515253 - 4515005
Alignment:
| Q |
51 |
attttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaatt |
150 |
Q |
| |
|
||||||||||||||| |||||| | |||||||| |||||||||| ||||||| | || ||| |||| ||||| ||||| |||||| | |||| || || |
|
|
| T |
4515253 |
attttgtttaagcaacacctccttgatcactttgtccaagttcaagtatgaagacccgccaagtctagtgtcctcgtctgccttctttttcaactccata |
4515154 |
T |
|
| Q |
151 |
atctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaa |
250 |
Q |
| |
|
| ||||||| |||| || ||||||||||||||||| |||| ||||||||| | ||| || ||||| |||||||||||||| | || ||||| || |||| |
|
|
| T |
4515153 |
acctttttcctcattttatttcctttctctcccaccatcaattcattgacaagcttttcaacctcctctctcttcacattcatatcgatttcgatcccaa |
4515054 |
T |
|
| Q |
251 |
tctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaa |
299 |
Q |
| |
|
||| |||||||||||||||| || | ||||||| ||| |||||| |||| |
|
|
| T |
4515053 |
tctcccattcattgcaaataaatctacagtttgttggttgatcaccaaa |
4515005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 51 - 299
Target Start/End: Original strand, 4505857 - 4506105
Alignment:
| Q |
51 |
attttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaatt |
150 |
Q |
| |
|
||||||||||||||| |||||| |||| ||||| |||||||||||| |||||||||||||||||||||| || || | ||| || | |||| || || |
|
|
| T |
4505857 |
attttgtttaagcaacacctccttaataactttgtccaagttcatgaatgaacaaccaccaggtcttgtatcctcctttgccctctttttcaactccatg |
4505956 |
T |
|
| Q |
151 |
atctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaa |
250 |
Q |
| |
|
| ||||||| ||||||| |||||||||||||| || || | ||||| ||||| |||||| || | ||||| |||||||| || |||||||| || |||| |
|
|
| T |
4505957 |
acctttttcctcatcttgtttcctttctctccaaccataatttcatcgaccagcttctctacattttctctattcacattagtatcaatttcgattccaa |
4506056 |
T |
|
| Q |
251 |
tctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaa |
299 |
Q |
| |
|
||| | |||||||||||||| || | ||||||| ||| |||||| |||| |
|
|
| T |
4506057 |
tctccaattcattgcaaataaatctacagtttgttggttgatcaccaaa |
4506105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 51 - 302
Target Start/End: Original strand, 4617022 - 4617273
Alignment:
| Q |
51 |
attttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaatt |
150 |
Q |
| |
|
||||||||||||||| || ||| |||| ||||| | |||||||||||||||||||||||| ||||| |||| || || |||||| |||||| || || |
|
|
| T |
4617022 |
attttgtttaagcaacacatccttaataactttgttcaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttcttcttcaactccatg |
4617121 |
T |
|
| Q |
151 |
atctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaa |
250 |
Q |
| |
|
||||| |||||| ||||||||||| ||||| |||||| |||||||| || ||| ||| ||| |||||||||||||| || || |||||||| |||| |
|
|
| T |
4617122 |
gccttttgcttcattttctttcctttatctccggctatcacttcattgatcagctttgccaactcctctctcttcacattcgtatcgatttccataccaa |
4617221 |
T |
|
| Q |
251 |
tctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||| ||||||||| |||||| || | |||| || |||||| || |||||||| |
|
|
| T |
4617222 |
tctcccattcattacaaataaatctacagtctgttggctggtcggcaaaaaa |
4617273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 270
Target Start/End: Complemental strand, 4504523 - 4504310
Alignment:
| Q |
57 |
tttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaattatcttt |
156 |
Q |
| |
|
||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| |||||||||| || || |||||| |||||| || || |||| |
|
|
| T |
4504523 |
tttaagcaagacgtccttaatcactttgtccaagttcatgtatgaacaaccaccaagtcttgtgtcctcctctgccttcttcttcaactccatggccttt |
4504424 |
T |
|
| Q |
157 |
ttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatctacc |
256 |
Q |
| |
|
| | ||||||||||||||||||||||||| |||| |||||| | | ||||| ||||| ||||||| ||||||| ||||| | ||| ||||||| || |
|
|
| T |
4504423 |
tgcctcatcttctttcctttctctcccaccatcaattcattaataagtttctctacctcttctctctgtacattggcatcaatcttcatcccaatctccc |
4504324 |
T |
|
| Q |
257 |
attcattgcaaata |
270 |
Q |
| |
|
|||| | ||||||| |
|
|
| T |
4504323 |
attcttcgcaaata |
4504310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 51 - 299
Target Start/End: Original strand, 4461123 - 4461371
Alignment:
| Q |
51 |
attttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaatt |
150 |
Q |
| |
|
||||||||||||||| || ||| |||| ||||| ||||||||| |||||||| ||| |||||||| || || || || ||||| |||| | ||| || |
|
|
| T |
4461123 |
attttgtttaagcaagacatccttaatgactttgtccaagttcttgtatgaaacacctccaggtctggtatcctcctccaccttcttcttgaattccatg |
4461222 |
T |
|
| Q |
151 |
atctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaa |
250 |
Q |
| |
|
| ||||| | ||||||||||||| ||||||| || |||| ||| ||||||||||||||||||||||| |||||||||| | || ||||| | |||| |
|
|
| T |
4461223 |
accttttgcctcatcttctttccaatctctccaaccatcaattcgttgaccaacttctccacctcatccctcttcacatctttatcgatttcaagtccaa |
4461322 |
T |
|
| Q |
251 |
tctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaa |
299 |
Q |
| |
|
||| ||||| ||||||||| || | |||||||||||||||||| |||| |
|
|
| T |
4461323 |
tctcccatttgttgcaaataaatctacagtttgctggctgatcaccaaa |
4461371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 302
Target Start/End: Original strand, 4601789 - 4602040
Alignment:
| Q |
51 |
attttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaatt |
150 |
Q |
| |
|
||||||||||||||| |||||| |||| ||||| |||| |||| |||||||||||||||| |||| ||| || | ||| || |||||| || || |
|
|
| T |
4601789 |
attttgtttaagcaacacctccttaataactttgtccaggttcttgtatgaacaaccacctagtctagtgctctcctttgccatcttcttcaactccatg |
4601888 |
T |
|
| Q |
151 |
atctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaa |
250 |
Q |
| |
|
||||| | |||||||||| ||||| ||||| |||||| |||||||| || |||| ||| ||| |||||||||||||| || || |||||||| |||| |
|
|
| T |
4601889 |
gccttttgcctcatcttcttgcctttatctccggctatcacttcattgatcagcttcgccaactcctctctcttcacatttgtatcgatttccataccaa |
4601988 |
T |
|
| Q |
251 |
tctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||| ||||||||| |||||| || | ||||||| ||||||||| |||||||| |
|
|
| T |
4601989 |
tctcccattcattacaaataaatctacagtttgttggctgatcggcaaaaaa |
4602040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 57 - 299
Target Start/End: Original strand, 4469809 - 4470051
Alignment:
| Q |
57 |
tttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaattatcttt |
156 |
Q |
| |
|
||||||||| || ||| |||| ||||| ||||||||| |||||||| ||| |||||||| || || || || ||||| |||| | || || |||||| |
|
|
| T |
4469809 |
tttaagcaagacatccttaatgactttgtccaagttcttgtatgaaacacctccaggtctggtatcctcctccaccttcttcttgaactccatgatcttt |
4469908 |
T |
|
| Q |
157 |
ttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatctacc |
256 |
Q |
| |
|
| | ||||||||||||| |||||||| || |||| ||||||||| | |||||||||||||||||||||||||| | || ||||| | ||||||| || |
|
|
| T |
4469909 |
tccctcatcttctttccattctctccaaccatcaattcattgactagcttctccacctcatctctcttcacatctttatcgatttcaagtccaatctccc |
4470008 |
T |
|
| Q |
257 |
attcattgcaaatatatatgcagtttgctggctgatcagcaaa |
299 |
Q |
| |
|
|||||||||||||| || | || |||||| |||||||| |||| |
|
|
| T |
4470009 |
attcattgcaaataaatctacaatttgctagctgatcaccaaa |
4470051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 270
Target Start/End: Complemental strand, 4490481 - 4490268
Alignment:
| Q |
57 |
tttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaattatcttt |
156 |
Q |
| |
|
|||||||| || ||| |||||||||| ||||||||||||||||||| |||||| |||| ||||| || | |||||| |||||| || | |||| |
|
|
| T |
4490481 |
tttaagcatgacatccttaatcactttgtccaagttcatgtatgaactaccaccgagtctcgtgtcctccgctgccttcttcttcaactccgtcgccttt |
4490382 |
T |
|
| Q |
157 |
ttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatctacc |
256 |
Q |
| |
|
| | ||||||||||||||||||||||||| |||| |||||||| || ||||| ||||| |||||||| |||||||| ||||||| ||| ||||||| || |
|
|
| T |
4490381 |
tgcctcatcttctttcctttctctcccaccatcaattcattgatcagtttctctacctcttctctctttacattggtatcaattttcatcccaatctccc |
4490282 |
T |
|
| Q |
257 |
attcattgcaaata |
270 |
Q |
| |
|
|||| | ||||||| |
|
|
| T |
4490281 |
attcttcgcaaata |
4490268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 4607037 - 4606958
Alignment:
| Q |
37 |
gtcacttaggtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtct |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
4607037 |
gtcacttaggtttgattttgtttaagcaaaaccttcttaatcactttttccaagttcatgtatgaaaaaccacctggtct |
4606958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 4457715 - 4457813
Alignment:
| Q |
172 |
cctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatctaccattcattgcaaata |
270 |
Q |
| |
|
||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||| || || |||||||| ||||||| ||||||||||||||| |
|
|
| T |
4457715 |
cctttttctcccaccatcaattcattgactaacttctccacctcatctctcttcacatttgtatcgatttccatcccaatctctcattcattgcaaata |
4457813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 302
Target Start/End: Original strand, 4568076 - 4568307
Alignment:
| Q |
74 |
taatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaattat-----ctttttcttcatcttc |
168 |
Q |
| |
|
|||||||||| |||||||||||||||||| || |||||||||||||||| | || |||||| ||||| ||||| | ||||| | ||||||| |
|
|
| T |
4568076 |
taatcactttgtccaagttcatgtatgaagaatcaccaggtcttgtgtccttctctgccttcttcttc--ttcaactccacggccttttgcctcatcttt |
4568173 |
T |
|
| Q |
169 |
tttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatctaccattcattgcaaa |
268 |
Q |
| |
|
|||||||||| |||||| || | |||||| | || |||||||||||| |||||||||||||| || |||||||| || || |||| | | | ||| |||| |
|
|
| T |
4568174 |
tttcctttctgtcccaccattaattcattcatcagcttctccacctcctctctcttcacatttgtatcaatttcgattccgatctccaacttattacaaa |
4568273 |
T |
|
| Q |
269 |
tatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||||| |||||| || |||||| |||| |||||| |
|
|
| T |
4568274 |
tatatctgcagtatgttggctgctcagaaaaaaa |
4568307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 302
Target Start/End: Complemental strand, 4256741 - 4256492
Alignment:
| Q |
54 |
ttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgt-cttcgtcggccttcatcttcagttcaattat |
152 |
Q |
| |
|
||||||||||| |||||| |||| ||||| ||||||||||| ||||| |||| | || || |||| |||| || | |||| |||||| ||| || | |
|
|
| T |
4256741 |
ttgtttaagcatgacctccttaataactttgtccaagttcatcaatgaatgaccagctgggctggtgttcttc-tctgtcttcttcttcaattccatgac |
4256643 |
T |
|
| Q |
153 |
ctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatc |
252 |
Q |
| |
|
||||| | |||||||||||||||| |||||| |||| |||||||| || |||||||||||||||||||||||||| || | ||||| || |||||| |
|
|
| T |
4256642 |
cttttgcctcatcttctttcctttttctcccgacatcaattcattgatcagattctccacctcatctctcttcacattagtattgatttcaattccaatc |
4256543 |
T |
|
| Q |
253 |
taccattcattgcaaatatatatgcagtttgctgg-ctgatcagcaaaaaa |
302 |
Q |
| |
|
| |||||| | |||||| || | ||||||| ||| ||||||||||||||| |
|
|
| T |
4256542 |
tcccattcgctacaaataaatctacagtttgttggtctgatcagcaaaaaa |
4256492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 300
Target Start/End: Original strand, 4625954 - 4626200
Alignment:
| Q |
54 |
ttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaattatc |
153 |
Q |
| |
|
|||||||||||| || || |||||| ||| |||| |||||||||||||||||||| || || ||| || || |||||| |||||| || || | |
|
|
| T |
4625954 |
ttgtttaagcaagacatcattaatcagtttatccatattcatgtatgaacaaccaccgggactaatgttctcctctgccttcttcttcaactccatggcc |
4626053 |
T |
|
| Q |
154 |
tttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatct |
253 |
Q |
| |
|
|||| | ||||||||||||| || ||||| | |||| | |||||| || ||||| ||| | || ||||||||||| | || |||||||| ||||||| |
|
|
| T |
4626054 |
ttttgcctcatcttctttccgttatctcctgccatcaatgcattgatcagtttctctaccccctccctcttcacattagcatcgatttccattccaatct |
4626153 |
T |
|
| Q |
254 |
accattcattgcaaatatatatgcagtttgctggctgatcagcaaaa |
300 |
Q |
| |
|
||||||||||||||||||| | || |||| |||||||||||||||| |
|
|
| T |
4626154 |
cccattcattgcaaatatatctacaatttgttggctgatcagcaaaa |
4626200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 294
Target Start/End: Original strand, 4492955 - 4493198
Alignment:
| Q |
51 |
attttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaatt |
150 |
Q |
| |
|
||||||||||||||| || ||| | |||||||| |||||||||||||||||||||||||||||| |||||| || || |||||| | |||| || | |
|
|
| T |
4492955 |
attttgtttaagcaagacatccttgatcactttgtccaagttcatgtatgaacaaccaccaggtactgtgtcctcctctgccttctttttcaactccgtg |
4493054 |
T |
|
| Q |
151 |
atctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaa |
250 |
Q |
| |
|
||| || ||||||| |||||||||||||| || || | |||||||||| |||||||| | ||||| || ||||| | || ||||| | |||| |
|
|
| T |
4493055 |
gcttttctcctcatcttgtttcctttctctccaaccataatctcattgaccagattctccacattttctctattaacattcctatcgatttctactccaa |
4493154 |
T |
|
| Q |
251 |
tctaccattcattgcaaatatatatgcagtttgctggctgatca |
294 |
Q |
| |
|
||| | ||||||||||||| || | ||||||| |||||||||| |
|
|
| T |
4493155 |
tctccaattcattgcaaatcaatctacagtttgttggctgatca |
4493198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 4260145 - 4260035
Alignment:
| Q |
192 |
ttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatctaccattcattgcaaatatatatgcagtttgctggctga |
291 |
Q |
| |
|
|||||||| || |||| ||||||||||||| |||||||| || | |||||| || ||||||| |||||| || |||||| || | ||||||| ||||||| |
|
|
| T |
4260145 |
ttcattgatcagcttcgccacctcatctcttttcacattagtattaatttcaattccaatctcccattcgttacaaataaatctacagtttgttggctga |
4260046 |
T |
|
| Q |
292 |
tcagcaaaaaa |
302 |
Q |
| |
|
||||||||||| |
|
|
| T |
4260045 |
tcagcaaaaaa |
4260035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 302
Target Start/End: Original strand, 4622145 - 4622393
Alignment:
| Q |
54 |
ttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgt-gtcttcgtcggccttcatcttcagttcaattat |
152 |
Q |
| |
|
||||||||||| |||||| |||| ||||| |||||||| ||||||||||||||||||| || || |||| | || |||||| ||||| || || |
|
|
| T |
4622145 |
ttgtttaagcatgacctccttaataactttgtccaagttgttgtatgaacaaccaccagggctggtcgtct-catctgccttctccttcaactccatggc |
4622243 |
T |
|
| Q |
153 |
ctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatc |
252 |
Q |
| |
|
||||| |||||||||||||||| |||||| |||| |||||||| || ||| |||||| ||||| |||||||| || | ||||| || |||||| |
|
|
| T |
4622244 |
cttttgtctcatcttctttcctttatctcccgacatcaattcattgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatc |
4622343 |
T |
|
| Q |
253 |
taccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
| |||| |||||| |||||| | ||||||| |||||||||||| ||||| |
|
|
| T |
4622344 |
tcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaa |
4622393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 4392154 - 4392087
Alignment:
| Q |
55 |
tgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtc |
122 |
Q |
| |
|
||||||||||| |||||| |||||| ||| |||||||||||| ||||| |||||||||||| |||||| |
|
|
| T |
4392154 |
tgtttaagcaagacctccttaatcagtttgtccaagttcatgaatgaagaaccaccaggtcatgtgtc |
4392087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 258
Target Start/End: Complemental strand, 4299869 - 4299671
Alignment:
| Q |
54 |
ttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaattatc |
153 |
Q |
| |
|
||||||||||| ||||||| |||| ||||| |||||||||||||| ||||||||||| || | |||| || || ||||||| | || || | |
|
|
| T |
4299869 |
ttgtttaagcagaacctccttaataactttgtccaagttcatgtacgaacaaccacctggattagtgttctcctctgccttcaac------tcccttgcc |
4299776 |
T |
|
| Q |
154 |
tttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatct |
253 |
Q |
| |
|
|||| ||||||| | ||||||||||||||| |||| |||||||| || ||| |||||||| |||||| ||||||| || || ||||| || ||||||| |
|
|
| T |
4299775 |
ttttgtctcatcttatctcctttctctcccaccatcaattcattgatcagcttttccacctcctctctcctcacatttgtatcgatttcgattccaatct |
4299676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 51 - 302
Target Start/End: Complemental strand, 28000231 - 27999980
Alignment:
| Q |
51 |
attttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaatt |
150 |
Q |
| |
|
||||||||||| ||| || ||| |||||||||| |||||||||||||||||||||||||| ||||| |||| || || ||||| |||||| || || |
|
|
| T |
28000231 |
attttgtttaaacaacacttccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgcctttttcttcaactccatg |
28000132 |
T |
|
| Q |
151 |
atctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaa |
250 |
Q |
| |
|
||||| | ||||||| ||||| ||||||||||| |||| |||||||| | |||||||| || ||| |||||||||| | ||||||||||| |||| |
|
|
| T |
28000131 |
gccttttgcctcatcttttttccattctctcccaccatcaattcattgataagcttctccaaatcctctatcttcacattcatatcaatttccataccaa |
28000032 |
T |
|
| Q |
251 |
tctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||| ||||||||| |||||| || | ||||||| |||||||||||||||||| |
|
|
| T |
28000031 |
tcttccattcattacaaataaatctacagtttgttggctgatcagcaaaaaa |
27999980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 299
Target Start/End: Original strand, 24103002 - 24103247
Alignment:
| Q |
54 |
ttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaattatc |
153 |
Q |
| |
|
||||||||||| |||||| |||| ||||| |||||||||||||||||| ||||||||| |||||||| || || |||||| |||| | || | | | |
|
|
| T |
24103002 |
ttgtttaagcatgacctccttaataactttgtccaagttcatgtatgaaaaaccaccagatcttgtgttctcttctgccttcttcttgaactccaagacc |
24103101 |
T |
|
| Q |
154 |
tttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatct |
253 |
Q |
| |
|
|||| ||||||| ||||||| ||||||||||| |||| ||||||||| |||||||| || ||||||||||||||||| || || ||||| | ||||||| |
|
|
| T |
24103102 |
ttttgcttcatcgtctttccgttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtatcgatttcgagtccaatct |
24103201 |
T |
|
| Q |
254 |
accattcattgcaaatatatatgcagtttgctggctgatcagcaaa |
299 |
Q |
| |
|
|||||||| ||||||| || | ||||||| ||| |||||| |||| |
|
|
| T |
24103202 |
cccattcatagcaaataaatctacagtttgttggttgatcaccaaa |
24103247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 299
Target Start/End: Complemental strand, 3848 - 3603
Alignment:
| Q |
54 |
ttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaattatc |
153 |
Q |
| |
|
||||||||||||||||||| |||| ||||| |||| |||||||||||||| |||||| ||||| |||| || || |||||| |||| | || | | |
|
|
| T |
3848 |
ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttcttctttaactccacggcc |
3749 |
T |
|
| Q |
154 |
tttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatct |
253 |
Q |
| |
|
|||| | ||||||||||||||||||||||||| ||| ||||||||| | |||||||||||||||||||||||||| | || ||||| | ||||||| |
|
|
| T |
3748 |
ttttgcctcatcttctttcctttctctcccaccgtcaattcattgactagcttctccacctcatctctcttcacatccatatcgatttcaagtccaatct |
3649 |
T |
|
| Q |
254 |
accattcattgcaaatatatatgcagtttgctggctgatcagcaaa |
299 |
Q |
| |
|
|||||| ||||||||| || | ||||||| |||||||||| |||| |
|
|
| T |
3648 |
cccattcgttgcaaataaatctacagtttgttggctgatcaccaaa |
3603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 51 - 302
Target Start/End: Original strand, 1281114 - 1281365
Alignment:
| Q |
51 |
attttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaatt |
150 |
Q |
| |
|
||||||||||||||| | ||| |||||||||| || ||||||||||||||||||||||| ||||| |||| || || ||| | |||||| ||| || |
|
|
| T |
1281114 |
attttgtttaagcaacatttccttaatcactttgtcgaagttcatgtatgaacaaccacccggtctagtgttctcctccgccgccttcttcaattccatg |
1281213 |
T |
|
| Q |
151 |
atctttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaa |
250 |
Q |
| |
|
||||| |||| |||||||||| || || |||||| |||||||| |||||| ||||||| |||||||||||||| || || |||||||| |||| |
|
|
| T |
1281214 |
gccttttctctcatattctttccttcatccccggctatcaattcattgatcaacttagccacctcctctctcttcacatttgtatcgatttccataccaa |
1281313 |
T |
|
| Q |
251 |
tctaccattcattgcaaatatatatgcagtttgctggctgatcagcaaaaaa |
302 |
Q |
| |
|
||| ||||||||| |||||| || | |||| || |||||||||||||||||| |
|
|
| T |
1281314 |
tcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaaa |
1281365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 3086530 - 3086651
Alignment:
| Q |
161 |
tcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatctaccattc |
260 |
Q |
| |
|
|||||||||||||||| |||||||| |||| |||||||| || |||||| ||||| |||||||||||||| || || ||||| || ||||||| |||| |
|
|
| T |
3086530 |
tcatcttctttcctttatctcccaccatcaattcattgatcagcttctcgacctcctctctcttcacattagtatcgatttcaattccaatctcccatat |
3086629 |
T |
|
| Q |
261 |
attgcaaatatatatgcagttt |
282 |
Q |
| |
|
|||||| |||||| | |||||| |
|
|
| T |
3086630 |
attgcagatatatctacagttt |
3086651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 3086426 - 3086479
Alignment:
| Q |
57 |
tttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccacc |
110 |
Q |
| |
|
||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
3086426 |
tttaagcaagacctccttaataactttgtccaagttcatgtatgaacaaccacc |
3086479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 258
Target Start/End: Complemental strand, 4815 - 4611
Alignment:
| Q |
54 |
ttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtcttgtgtcttcgtcggccttcatcttcagttcaattatc |
153 |
Q |
| |
|
||||||||||| |||||| |||||||||| |||||||||||||||||||| ||||||| || |||| || || |||||| |||||| || || | |
|
|
| T |
4815 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccaccagaactggtgttctcctctgccttcttcttcaactccatggcc |
4716 |
T |
|
| Q |
154 |
tttttcttcatcttctttcctttctctcccactatcagttcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatgccaatct |
253 |
Q |
| |
|
|||| | |||||||| ||||||| |||||| |||| |||||||| || ||| |||| |||||||||||||| || ||||||||||| ||| ||| |
|
|
| T |
4715 |
ttttgcctcatcttcattcctttatctcccgacatcaattcattgatcatattcgttaccttctctctcttcacattagtatcaatttccataccagtct |
4616 |
T |
|
| Q |
254 |
accat |
258 |
Q |
| |
|
|||| |
|
|
| T |
4615 |
cccat |
4611 |
T |
|
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Target: scaffold0475 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 3662 - 3598
Alignment:
| Q |
205 |
ttctccacctcatctctcttcacattggtgtcaatttccatgccaatctaccattcattgcaaat |
269 |
Q |
| |
|
||||||||||| |||||||||||||||| || ||||| | ||||||| ||||||||| ||||| |
|
|
| T |
3662 |
ttctccacctcctctctcttcacattggaatctatttcacttccaatctcccattcattccaaat |
3598 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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