View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16266_low_13 (Length: 235)
Name: NF16266_low_13
Description: NF16266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16266_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 187331 - 187111
Alignment:
| Q |
1 |
gtgagtaaactgttatgtttcatacttttttcttactcgttgacttatcaatggtttaactgttgaaagtcaaacaatggtttccttattcaaaatttca |
100 |
Q |
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| T |
187331 |
gtgagtaaactgttatgtttcatacttttttcttactcgttgacttatcaatggtttaactgttgaaagtcaaaaaatggtttccttattcaaaatttca |
187232 |
T |
|
| Q |
101 |
ggggttgatgaaacttggaagcaattgagtaggtatatatcaaacatcgtaagttctatggttcgattttaggatttatgtcgttgataattatagtgat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
187231 |
ggggttgatgaaacttggaagcaattgagtaggtatatatcaaacatcgtaagttctatggtttgattttaggatttatgtcgttgataattatagtgat |
187132 |
T |
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| Q |
201 |
acttctaccttaagaagaaat |
221 |
Q |
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||||||||||||||||||||| |
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| T |
187131 |
acttctaccttaagaagaaat |
187111 |
T |
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