View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16267_high_12 (Length: 268)
Name: NF16267_high_12
Description: NF16267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16267_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 28035176 - 28035419
Alignment:
| Q |
11 |
aagaactatttagtaaaattattgcaatcatgataaatctttttctatctaatctttataaaaatactcaaaatgaaataaagagtaagttcaattgtgc |
110 |
Q |
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| T |
28035176 |
aagaactatttagtaaaattattgcaatcatgataaatctttttctatctaatctttataaaaatactcaaaatgaaataaagagtaagttcaattgtgc |
28035275 |
T |
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| Q |
111 |
ttaattttagccatgaataattctagcaaatccattttaatacacttctttttaacttttattc-cttatcagatgaaatacacacgagtttgaccacct |
209 |
Q |
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| T |
28035276 |
ttaattttagccatgaataattctagcaaatccattttaatacacttctttttaacttttattctcttattagatgaaatacacatgagtctgaccactt |
28035375 |
T |
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| Q |
210 |
tacgtaaaacctatttctaaagtggtgtgacctgtatgcatatt |
253 |
Q |
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| T |
28035376 |
taccgaaaacctatttctaaagtggtgtgatctgtatgtatatt |
28035419 |
T |
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