View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16267_low_10 (Length: 408)
Name: NF16267_low_10
Description: NF16267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16267_low_10 |
 |  |
|
| [»] scaffold0627 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 368; Significance: 0; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 23 - 398
Target Start/End: Complemental strand, 8547829 - 8547454
Alignment:
| Q |
23 |
tgggatacataagataagaagaagaaatttgaggatccacttatttctccatgttggtgttccgagtgtgtgtatctcaacaattaccacacgctcaatc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547829 |
tgggatacataagataagaagaagaaatttgaggatccacttatttctccatgttggtgttccgagtgtgtgtatctcaacaattaccacacgctcaatc |
8547730 |
T |
 |
| Q |
123 |
tcacatgcataatcacatattgcacgtctagcatatttcttccaaatatttatcactttatattcattagttttaggatagaaaccacaaccagctgctt |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547729 |
tcacatgcataatcacatattgcacgtctagcatatttcttccaaatatttatcactttatattcattagttttaggatagaaaccacaaccagctgctt |
8547630 |
T |
 |
| Q |
223 |
cttgatttaaaacataatctgtgtcatttggcatacgaatcgtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagg |
322 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547629 |
cttgatttaaaatataagctgtgtcatttggcatacgaatcgtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagg |
8547530 |
T |
 |
| Q |
323 |
gtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcacaatatcaaaatgatcacgatctctg |
398 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547529 |
gtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcacaatatcaaaatgatcacgatctctg |
8547454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 262 - 382
Target Start/End: Complemental strand, 9074245 - 9074125
Alignment:
| Q |
262 |
tcgtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccact |
361 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||| || ||| | |
|
|
| T |
9074245 |
tcgtggtagcttcaggaagtcttatgaactcccctgtgactgggttgcagatcactgaagggtttccggtagttggttcagacaaacaaagtaaaccatt |
9074146 |
T |
 |
| Q |
362 |
gcaagaattcacaatatcaaa |
382 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
9074145 |
gcaagaattcacaatatcaaa |
9074125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 378
Target Start/End: Complemental strand, 1599802 - 1599691
Alignment:
| Q |
267 |
gtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaag |
366 |
Q |
| |
|
|||| |||| ||||||||||||||||||| |||||||| |||||||||||||| ||||||||| | ||| |||||||||||||| || ||| |||||| |
|
|
| T |
1599802 |
gtagattcaggaagtcttatgaactccccagtgattgggttgcagatcactaatgggtttccgaaatatgggtcagacaaacaaagtaaaccattgcaag |
1599703 |
T |
 |
| Q |
367 |
aattcacaatat |
378 |
Q |
| |
|
|||||||||||| |
|
|
| T |
1599702 |
aattcacaatat |
1599691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 264 - 382
Target Start/End: Original strand, 8529538 - 8529656
Alignment:
| Q |
264 |
gtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgc |
363 |
Q |
| |
|
||||||| |||| ||||||||||||||||||| |||| ||| ||||||||||||| |||||||| || ||| |||||||||||||| || ||| ||| |
|
|
| T |
8529538 |
gtagtagattcaggaagtcttatgaactcccccgtgactgggttgcagatcactattgggtttccaaaagatgggtcagacaaacaaagtaaaccattgc |
8529637 |
T |
 |
| Q |
364 |
aagaattcacaatatcaaa |
382 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8529638 |
aagaattcacaatatcaaa |
8529656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 8536110 - 8536220
Alignment:
| Q |
272 |
ttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattc |
371 |
Q |
| |
|
|||| |||||||||| |||||||| |||| ||| |||||||||||||| |||||||| || ||| |||||||||||||| || ||| ||||||||||| |
|
|
| T |
8536110 |
ttcaggaagtcttataaactccccagtgactgggttgcagatcactaatgggtttccaaaagatgggtcagacaaacaaagtaaaccattgcaagaattc |
8536209 |
T |
 |
| Q |
372 |
acaatatcaaa |
382 |
Q |
| |
|
||||||||||| |
|
|
| T |
8536210 |
acaatatcaaa |
8536220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 2844514 - 2844444
Alignment:
| Q |
306 |
ttgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcacaat |
376 |
Q |
| |
|
||||| |||||||||||| ||||| ||| || |||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
2844514 |
ttgcaaatcactaaagggcttccgatagatgtttcagataaacaaagcaagccattgcaagaattcacaat |
2844444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 2856347 - 2856277
Alignment:
| Q |
306 |
ttgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcacaat |
376 |
Q |
| |
|
||||| |||||||||||| ||||| ||| || |||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
2856347 |
ttgcaaatcactaaagggcttccgatagatgtttcagataaacaaagcaagccattgcaagaattcacaat |
2856277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 2873957 - 2873887
Alignment:
| Q |
306 |
ttgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcacaat |
376 |
Q |
| |
|
||||| |||||||||||| ||||| ||| || |||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
2873957 |
ttgcaaatcactaaagggcttccgatagatgtttcagataaacaaagcaagccattgcaagaattcacaat |
2873887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 2904463 - 2904393
Alignment:
| Q |
306 |
ttgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcacaat |
376 |
Q |
| |
|
||||| ||| |||||||| ||||||||| || |||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
2904463 |
ttgcaaatcgctaaagggcttccggtagatgtttcagataaacaaagcaagccattgcaagaattcacaat |
2904393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 2874199 - 2874139
Alignment:
| Q |
44 |
aagaaatttgaggatccactt----atttctccatgttggtgttccgagtgtgtgtatctc |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
2874199 |
aagaaatttgaggatccacttcaacatttctccatgatggtgttccgagcgtgtgtatctc |
2874139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 2904705 - 2904643
Alignment:
| Q |
44 |
aagaaatttgaggatccactt----atttctccatgttggtgttccgagtgtgtgtatctcaa |
102 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| || ||||||||| ||||||||||||| |
|
|
| T |
2904705 |
aagaaatttgaggatccacttcaagatttctccatgatgttgttccgagcgtgtgtatctcaa |
2904643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 2856589 - 2856529
Alignment:
| Q |
44 |
aagaaatttgaggatccactt----atttctccatgttggtgttccgagtgtgtgtatctc |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| || ||||||||| ||||||||||| |
|
|
| T |
2856589 |
aagaaatttgaggatccacttcaacatttctccatgatgatgttccgagcgtgtgtatctc |
2856529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 8536024 - 8536071
Alignment:
| Q |
171 |
tttatcactttatattcattagttttaggatagaaaccacaaccagct |
218 |
Q |
| |
|
|||||||| |||||||||||||||||||| | ||||||| |||||||| |
|
|
| T |
8536024 |
tttatcaccttatattcattagttttaggttggaaaccaaaaccagct |
8536071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 373
Target Start/End: Complemental strand, 11353992 - 11353898
Alignment:
| Q |
279 |
agtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcac |
373 |
Q |
| |
|
|||||||| ||||| ||| | ||||||||||| | |||||| ||||| | ||| ||| ||||| ||||||||||||||| |||| |||||||| |
|
|
| T |
11353992 |
agtcttataaactcacctataattggattgcaaacaactaaatggtttacagtatatggctcagataaacaaagcaagccattgcaggaattcac |
11353898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 373
Target Start/End: Original strand, 11373401 - 11373495
Alignment:
| Q |
279 |
agtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcac |
373 |
Q |
| |
|
|||||||| ||||| ||| | ||||||||||| | |||||| ||||| | ||| ||| ||||| ||||||||||||||| |||| |||||||| |
|
|
| T |
11373401 |
agtcttataaactcacctataattggattgcaaacaactaaatggtttacagtatatggctcagataaacaaagcaagccattgcaggaattcac |
11373495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 1600002 - 1599940
Alignment:
| Q |
44 |
aagaaatttgaggatccactt----atttctccatgttggtgttccgagtgtgtgtatctcaa |
102 |
Q |
| |
|
||||||||||||||||||||| ||||||||| | ||||||||| ||||||| |||||||| |
|
|
| T |
1600002 |
aagaaatttgaggatccacttcaacatttctccaggatggtgttccaagtgtgtttatctcaa |
1599940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 8644623 - 8644684
Alignment:
| Q |
45 |
agaaatttgaggatccactt----atttctccatgttggtgttccgagtgtgtgtatctcaa |
102 |
Q |
| |
|
||||||||||||||| |||| ||||||||||| ||||||||| ||||||| |||||||| |
|
|
| T |
8644623 |
agaaatttgaggatctacttcagcatttctccatgatggtgttccaagtgtgtttatctcaa |
8644684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 8644717 - 8644769
Alignment:
| Q |
147 |
cgtctagcatatttcttccaaatatttatcactttatattcattagttttagg |
199 |
Q |
| |
|
|||||| ||||||| | |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
8644717 |
cgtctaacatatttgtcccaaatatacatcaccttatattcattagttttagg |
8644769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: scaffold0627
Description:
Target: scaffold0627; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 163 - 397
Target Start/End: Original strand, 5187 - 5418
Alignment:
| Q |
163 |
tccaaatatttatcactttatattcattagttttaggatagaaaccacaaccagctgcttcttgatttaaaacataatctgtgtcatttggcatacgaat |
262 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||| || ||| | | ||||||| ||||||||||| |
|
|
| T |
5187 |
tccaaatatgtatcactttatattcattagtcgtaggatagaaaccaaaaccagct---tcttgtcctattacacgaaccgtgtcatgtggcatacgaac |
5283 |
T |
 |
| Q |
263 |
cgtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactg |
362 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| | |
|
|
| T |
5284 |
cgtattagcttcaggaagtcttatgaactcccccatgaatgggttgcagatcactaaagggtttccggtagttggttgagacaaacatagcaagccatta |
5383 |
T |
 |
| Q |
363 |
caagaattcacaatatcaaaatgatcacgatctct |
397 |
Q |
| |
|
|| |||||||||||| ||||| ||| |||||||| |
|
|
| T |
5384 |
caggaattcacaatactaaaattatcgcgatctct |
5418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 5049 - 5135
Alignment:
| Q |
23 |
tgggatacataagataagaagaagaaatttgaggatccac----ttatttctccatgttggtgttccgagtgtgtgtatctcaacaa |
105 |
Q |
| |
|
|||||| ||||||| | ||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
5049 |
tgggattcataagacatgaaaatgaaatttgaggatccacattgatatttctccatgttgatgttccgagtgtgtgtatctcgacaa |
5135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 163 - 394
Target Start/End: Original strand, 16716885 - 16717113
Alignment:
| Q |
163 |
tccaaatatttatcactttatattcattagttttaggatagaaaccacaaccagctgcttcttgatttaaaacataatctgtgtcatttggcatacgaat |
262 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| || |||| | | ||||||| |||||||||| |
|
|
| T |
16716885 |
tccaaatatgtatcactttatattcattagttttaggatagaaaccaaaaccagct---tcttgtcctattacatgaaccctgtcattcggcatacgaac |
16716981 |
T |
 |
| Q |
263 |
cgtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactg |
362 |
Q |
| |
|
||||||| |||| ||||||||||||| ||||| ||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||| | |
|
|
| T |
16716982 |
tgtagtagtttcaggaagtcttatgaattcccccatgaatgggttgcagatcactatagggtttccagtagttggttcagacaaacatagcaagccatta |
16717081 |
T |
 |
| Q |
363 |
caagaattcacaatatcaaaatgatcacgatc |
394 |
Q |
| |
|
|| ||||||||||||| ||| | ||||||||| |
|
|
| T |
16717082 |
catgaattcacaatattaaacttatcacgatc |
16717113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 16716750 - 16716836
Alignment:
| Q |
23 |
tgggatacataagataagaagaagaaatttgaggatccac----ttatttctccatgttggtgttccgagtgtgtgtatctcaacaa |
105 |
Q |
| |
|
|||||| ||||||| | ||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16716750 |
tgggattcataagacatgaaaatgaaatttgaggatccacattgatatttctccatgttggtgttccgagtgtgtgtatctcaacaa |
16716836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 266 - 382
Target Start/End: Complemental strand, 48361355 - 48361239
Alignment:
| Q |
266 |
agtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaa |
365 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||| || ||| |||||||||||||| || ||| ||||| |
|
|
| T |
48361355 |
agtagattcaggaagtcttatgaactcccctgtgactgggttgcagatcactaacgggtttcccaaagatggatcagacaaacaaagtaaaccattgcaa |
48361256 |
T |
 |
| Q |
366 |
gaattcacaatatcaaa |
382 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
48361255 |
gaattcacaatatcaaa |
48361239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 378
Target Start/End: Original strand, 35780427 - 35780544
Alignment:
| Q |
262 |
tcgtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaaggg-tttccggtagttggttcagacaaacaaagcaagccac |
360 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||| ||| ||||| |||||||||||| ||| ||||| ||| | ||||||||||||||| ||| |
|
|
| T |
35780427 |
tcgtagtagcttcaggaagtcttatgaactcccccgtgactgggttgcaaatcactaaagggtttttcggtatatggattagacaaacaaagcaaaccat |
35780526 |
T |
 |
| Q |
361 |
tgcaagaattcacaatat |
378 |
Q |
| |
|
|||||||||| ||||||| |
|
|
| T |
35780527 |
tgcaagaattgacaatat |
35780544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 35780336 - 35780383
Alignment:
| Q |
171 |
tttatcactttatattcattagttttaggatagaaaccacaaccagct |
218 |
Q |
| |
|
|||||||| |||||||||||||||||||| | ||||||| |||||||| |
|
|
| T |
35780336 |
tttatcaccttatattcattagttttaggttggaaaccaaaaccagct |
35780383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 48361435 - 48361388
Alignment:
| Q |
171 |
tttatcactttatattcattagttttaggatagaaaccacaaccagct |
218 |
Q |
| |
|
|||||||| |||||||||||||||||||| | ||||||| |||||||| |
|
|
| T |
48361435 |
tttatcaccttatattcattagttttaggttggaaaccaaaaccagct |
48361388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 264 - 382
Target Start/End: Original strand, 9443699 - 9443817
Alignment:
| Q |
264 |
gtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgc |
363 |
Q |
| |
|
||||||| |||| ||||||||||||||||||| |||| ||| ||||||||||||| |||||||| || ||| |||||||||||||| || ||| ||| |
|
|
| T |
9443699 |
gtagtagattcaggaagtcttatgaactcccccgtgactgggttgcagatcactattgggtttccaaaagatgggtcagacaaacaaagtaaaccattgc |
9443798 |
T |
 |
| Q |
364 |
aagaattcacaatatcaaa |
382 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
9443799 |
aagaattcacaatatcaaa |
9443817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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