View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16269_high_3 (Length: 246)
Name: NF16269_high_3
Description: NF16269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16269_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 230
Target Start/End: Original strand, 36005775 - 36005995
Alignment:
| Q |
10 |
gttgggatggactcctcggattagttgtctttataccggataccaaattttaaaaaataatacatacaaaaaggttttcatagttgatttcttgtgcaat |
109 |
Q |
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| T |
36005775 |
gttgggatggactcctcggattaattgtctttataccggataccaaatttaaaaaaaatatagatacaaaaaggttctcatagttgatttcttgtgcaat |
36005874 |
T |
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| Q |
110 |
atatagtcacaagatatagtacaaagagaggaatggagaagcatcatcgtatatgacatgacacattgatatagcattaagataagatgcgagatgcggc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36005875 |
atatagtcacaagatatagtacaaagagaggaatggagaagcatcatcgtatatgacatgacacattgatatagcattaagataagatgcgagatgcggc |
36005974 |
T |
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| Q |
210 |
taccagtaaacatcatataat |
230 |
Q |
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||||||||||||||||||||| |
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| T |
36005975 |
taccagtaaacatcatataat |
36005995 |
T |
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