View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16271_high_12 (Length: 237)
Name: NF16271_high_12
Description: NF16271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16271_high_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 39791937 - 39792166
Alignment:
| Q |
18 |
aatatgacaatattaaagcacaattttggatacatt----------tgcgactattggttagacattcaagcatgaaaatgactatttatcctttgattt |
107 |
Q |
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| T |
39791937 |
aatatgacaatattaaagcacaattttggatacattgaagcacaattgtgactattggttacacattcaagcatgaaaatgactatttatcctttgattt |
39792036 |
T |
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| Q |
108 |
ttaaatcagtgattatagttttgcactttgtccacaaaaatgcatttcttaaatccatcaatatggtcttgattggagaggtaaaaatggaatatttttg |
207 |
Q |
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| T |
39792037 |
ttaaatcagtgattatagttttgcactttgtccacaaaaatgcatttcttaaatccatcaatatggtcttgattggagaggtaaaaatggaatatttttg |
39792136 |
T |
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| Q |
208 |
aacttcaaatcagtttcaaaaccaatttgc |
237 |
Q |
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| T |
39792137 |
aacttcaaatcagtttcaaaaccaatttgc |
39792166 |
T |
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