View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16271_high_6 (Length: 357)
Name: NF16271_high_6
Description: NF16271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16271_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 33357743 - 33357422
Alignment:
| Q |
1 |
tctctcaaatgtcaatgattgatttctcataatatatttcagcatttggtgataatggtttataat-aatacttcatcattcaatgcacagtggcattga |
99 |
Q |
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| T |
33357743 |
tctctcaaatgtcaatgattgaattctcataatatatttcagcatttggtgataatggtttataattaataatacttcattcaatgcacagtggcattga |
33357644 |
T |
|
| Q |
100 |
attcttgctttcagttccacattaactaaaggtaatttcttgttctataagcttaaacatatgaatctcaatgttcaattcaatgtatcagcttttggct |
199 |
Q |
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| T |
33357643 |
attcttgctttcaattccacattaactaaaggtaatttcttgttctataagcttaaacatatgaatttcaatgtt-----caatgtatcagcttttggct |
33357549 |
T |
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| Q |
200 |
tttctctgaaaagcacttcaaatcacgtttggaaaaccaagcattgtgccaattttgtttatgaatgatgaagattttgtgttctttataaaagggttct |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |
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| T |
33357548 |
tttctctgaaaagcacttcaaatcacgtttggaaaaccaagcattgtgccaattttgttt----atgatgaagattttgt---------------gttct |
33357468 |
T |
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| Q |
300 |
tagttttcttcattatttgaggttattaataatgtagaatgatgat |
345 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33357467 |
tagttttcttcattatttgaggttattaataatgtagaatgatgat |
33357422 |
T |
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