View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16272_low_17 (Length: 224)
Name: NF16272_low_17
Description: NF16272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16272_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 7907513 - 7907322
Alignment:
| Q |
19 |
aaatatatctcagcctcactaccagctggagaagtgagaacgagtttaggcaaattcccttcaccttcggtaacttttactcccaaagtacttttttctt |
118 |
Q |
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| T |
7907513 |
aaatatatctcagcctcactaccagctggagaagtgagaacgagtttaggtaaatttccttcaccttcggtaacttttactcccaaagtagttttttctt |
7907414 |
T |
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| Q |
119 |
tgtttcccaaacttgcaaatgcaattccactacatcgcagaaaaataattgttgatgaattattacaagctaggaaaatttgaagagaaaag |
210 |
Q |
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| T |
7907413 |
tgtttcccaaacttgcaaatgcaattccactacatcgcagaaaaataattgttgatgaattattacaagctaggaaaatttgaagagaaaag |
7907322 |
T |
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