View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16272_low_7 (Length: 437)

Name: NF16272_low_7
Description: NF16272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16272_low_7
NF16272_low_7
[»] chr5 (59 HSPs)
chr5 (20-421)||(7907873-7908275)
chr5 (308-421)||(2568650-2568762)
chr5 (276-412)||(17258817-17258952)
chr5 (354-421)||(10272442-10272509)
chr5 (278-421)||(34975356-34975498)
chr5 (284-413)||(12459943-12460071)
chr5 (302-407)||(37611175-37611279)
chr5 (302-407)||(37787905-37788009)
chr5 (258-413)||(16937799-16937953)
chr5 (321-413)||(17368676-17368767)
chr5 (356-420)||(18543210-18543273)
chr5 (350-412)||(4014431-4014493)
chr5 (276-338)||(13244485-13244547)
chr5 (347-413)||(33533543-33533609)
chr5 (267-388)||(10125643-10125763)
chr5 (307-420)||(37526164-37526276)
chr5 (307-420)||(37588325-37588437)
chr5 (353-413)||(11707055-11707115)
chr5 (353-421)||(12425563-12425631)
chr5 (307-406)||(7674655-7674753)
chr5 (284-391)||(8089958-8090064)
chr5 (356-407)||(12242723-12242774)
chr5 (354-421)||(36318766-36318833)
chr5 (354-421)||(36326003-36326070)
chr5 (352-406)||(7319017-7319071)
chr5 (302-413)||(18857358-18857470)
chr5 (276-330)||(35095721-35095774)
chr5 (276-386)||(41112832-41112941)
chr5 (352-418)||(41957460-41957526)
chr5 (261-314)||(36542205-36542258)
chr5 (313-421)||(6587078-6587185)
chr5 (361-413)||(6593299-6593351)
chr5 (352-420)||(12975340-12975407)
chr5 (321-413)||(17827524-17827615)
chr5 (361-421)||(25461083-25461143)
chr5 (276-420)||(32172646-32172789)
chr5 (352-420)||(32194088-32194156)
chr5 (351-418)||(1465028-1465094)
chr5 (346-413)||(3237093-3237160)
chr5 (350-413)||(7984969-7985032)
chr5 (354-417)||(29659347-29659410)
chr5 (361-420)||(31030148-31030207)
chr5 (373-420)||(34117566-34117613)
chr5 (362-413)||(43300878-43300929)
chr5 (276-334)||(1961993-1962051)
chr5 (298-412)||(3977309-3977422)
chr5 (360-418)||(6183439-6183497)
chr5 (352-406)||(36639529-36639583)
chr5 (353-399)||(38104867-38104913)
chr5 (294-414)||(1916246-1916362)
chr5 (352-417)||(18875357-18875422)
chr5 (352-413)||(31694518-31694579)
chr5 (367-420)||(34245717-34245770)
chr5 (354-419)||(39594801-39594866)
chr5 (352-388)||(8177541-8177577)
chr5 (260-336)||(11095413-11095489)
chr5 (362-414)||(11700162-11700214)
chr5 (314-413)||(29925841-29925940)
chr5 (359-411)||(40205090-40205142)
[»] chr7 (40 HSPs)
chr7 (258-415)||(24363516-24363673)
chr7 (307-413)||(19022549-19022655)
chr7 (277-406)||(7244687-7244816)
chr7 (260-413)||(30535563-30535715)
chr7 (258-413)||(34744028-34744182)
chr7 (278-420)||(25670522-25670663)
chr7 (284-388)||(23214880-23214983)
chr7 (277-377)||(24967097-24967196)
chr7 (353-421)||(44821951-44822019)
chr7 (259-420)||(46082027-46082189)
chr7 (359-411)||(48917362-48917414)
chr7 (295-370)||(36537951-36538025)
chr7 (263-421)||(752961-753118)
chr7 (276-413)||(2825170-2825301)
chr7 (354-404)||(25596042-25596092)
chr7 (359-420)||(18965726-18965787)
chr7 (304-413)||(48470044-48470153)
chr7 (350-406)||(529382-529438)
chr7 (295-399)||(43250653-43250755)
chr7 (352-420)||(44151489-44151557)
chr7 (295-406)||(9038119-9038228)
chr7 (374-421)||(18350738-18350785)
chr7 (351-406)||(27378836-27378891)
chr7 (373-420)||(30456480-30456527)
chr7 (350-413)||(33601417-33601479)
chr7 (295-334)||(48131415-48131454)
chr7 (263-305)||(2895343-2895385)
chr7 (343-385)||(26935557-26935599)
chr7 (316-406)||(28614440-28614530)
chr7 (376-418)||(32210262-32210304)
chr7 (360-414)||(47130802-47130856)
chr7 (350-411)||(9423601-9423662)
chr7 (359-404)||(12792579-12792624)
chr7 (359-420)||(46104583-46104644)
chr7 (276-328)||(5288195-5288247)
chr7 (316-407)||(11619131-11619222)
chr7 (352-420)||(15075094-15075162)
chr7 (361-421)||(17944361-17944421)
chr7 (307-407)||(21568459-21568559)
chr7 (321-413)||(39967920-39968012)
[»] chr1 (75 HSPs)
chr1 (276-420)||(31517674-31517817)
chr1 (276-413)||(7136932-7137068)
chr1 (276-404)||(10199342-10199469)
chr1 (347-421)||(34290228-34290302)
chr1 (276-389)||(6292517-6292628)
chr1 (276-399)||(32515375-32515497)
chr1 (352-420)||(23902076-23902144)
chr1 (350-413)||(25479581-25479644)
chr1 (352-420)||(28689461-28689531)
chr1 (276-399)||(37593618-37593740)
chr1 (350-413)||(38503472-38503535)
chr1 (307-421)||(49938739-49938853)
chr1 (307-421)||(2777884-2777997)
chr1 (258-316)||(6231732-6231790)
chr1 (284-405)||(19389909-19390030)
chr1 (321-419)||(37842334-37842431)
chr1 (307-421)||(51695459-51695573)
chr1 (295-420)||(7218027-7218151)
chr1 (352-413)||(26779934-26779995)
chr1 (352-413)||(27140478-27140539)
chr1 (348-421)||(45975682-45975755)
chr1 (350-399)||(46252689-46252738)
chr1 (353-413)||(12564509-12564569)
chr1 (350-417)||(5887001-5887068)
chr1 (350-421)||(35590899-35590970)
chr1 (307-413)||(3233979-3234085)
chr1 (359-413)||(7472311-7472365)
chr1 (350-420)||(14629973-14630043)
chr1 (350-388)||(15361065-15361103)
chr1 (276-338)||(24313610-24313672)
chr1 (359-421)||(43332476-43332538)
chr1 (356-421)||(4700079-4700144)
chr1 (352-420)||(5592694-5592762)
chr1 (257-420)||(37241736-37241899)
chr1 (275-391)||(4768762-4768877)
chr1 (352-412)||(12593462-12593522)
chr1 (352-412)||(47598430-47598490)
chr1 (350-413)||(219558-219621)
chr1 (350-421)||(1510317-1510388)
chr1 (354-417)||(4548717-4548780)
chr1 (350-413)||(10744301-10744364)
chr1 (297-412)||(17269251-17269365)
chr1 (259-338)||(17420277-17420355)
chr1 (263-338)||(18327067-18327142)
chr1 (350-413)||(24915058-24915121)
chr1 (350-421)||(27820344-27820415)
chr1 (343-406)||(28077069-28077132)
chr1 (276-371)||(40413956-40414050)
chr1 (295-370)||(42757130-42757204)
chr1 (350-413)||(51688705-51688767)
chr1 (323-409)||(3924628-3924713)
chr1 (276-338)||(4757412-4757474)
chr1 (378-420)||(5421955-5421997)
chr1 (296-334)||(8810080-8810118)
chr1 (284-338)||(15581328-15581382)
chr1 (284-338)||(28348729-28348783)
chr1 (359-421)||(29793774-29793836)
chr1 (352-406)||(35017583-35017637)
chr1 (352-418)||(35179134-35179200)
chr1 (299-385)||(38170647-38170732)
chr1 (257-334)||(4033932-4034009)
chr1 (350-391)||(8016279-8016320)
chr1 (352-417)||(16322845-16322910)
chr1 (352-417)||(27963379-27963444)
chr1 (347-420)||(28482237-28482310)
chr1 (258-383)||(33723298-33723422)
chr1 (261-338)||(36070255-36070332)
chr1 (354-411)||(38116089-38116146)
chr1 (302-371)||(38578570-38578638)
chr1 (352-413)||(39347976-39348037)
chr1 (351-388)||(47877134-47877171)
chr1 (352-420)||(4622086-4622154)
chr1 (352-420)||(12564883-12564951)
chr1 (352-420)||(27887127-27887195)
chr1 (352-420)||(30371141-30371209)
[»] chr4 (69 HSPs)
chr4 (276-413)||(28615334-28615470)
chr4 (294-420)||(2996566-2996691)
chr4 (307-417)||(52315161-52315271)
chr4 (350-421)||(17884060-17884131)
chr4 (276-420)||(18628487-18628620)
chr4 (287-410)||(4798511-4798633)
chr4 (354-420)||(16494816-16494882)
chr4 (259-413)||(21731573-21731726)
chr4 (276-416)||(42641573-42641714)
chr4 (277-331)||(51555705-51555759)
chr4 (352-406)||(53673667-53673721)
chr4 (260-420)||(42866061-42866220)
chr4 (350-421)||(7694017-7694088)
chr4 (350-413)||(17822872-17822935)
chr4 (262-385)||(32831438-32831559)
chr4 (361-420)||(36722687-36722746)
chr4 (350-421)||(49202637-49202708)
chr4 (354-420)||(10192277-10192342)
chr4 (359-417)||(11158373-11158431)
chr4 (350-412)||(29263371-29263433)
chr4 (276-386)||(33534103-33534212)
chr4 (350-404)||(40532601-40532655)
chr4 (350-404)||(47145971-47146025)
chr4 (276-329)||(1017111-1017164)
chr4 (297-386)||(1137739-1137827)
chr4 (307-420)||(23819082-23819194)
chr4 (361-410)||(30668384-30668433)
chr4 (276-369)||(37575870-37575962)
chr4 (360-413)||(47800623-47800676)
chr4 (350-411)||(55084488-55084549)
chr4 (358-414)||(1404416-1404472)
chr4 (376-420)||(27970051-27970095)
chr4 (352-420)||(49219132-49219200)
chr4 (373-421)||(56480340-56480388)
chr4 (352-419)||(11802528-11802595)
chr4 (285-336)||(22471350-22471401)
chr4 (276-335)||(25487491-25487550)
chr4 (263-337)||(8328040-8328114)
chr4 (354-412)||(17975380-17975438)
chr4 (283-325)||(22772417-22772459)
chr4 (276-338)||(24087410-24087472)
chr4 (276-338)||(24091537-24091599)
chr4 (315-381)||(25332807-25332873)
chr4 (299-413)||(27721717-27721830)
chr4 (354-420)||(30207582-30207648)
chr4 (285-335)||(39178209-39178259)
chr4 (350-420)||(43824276-43824346)
chr4 (261-411)||(46019548-46019697)
chr4 (324-386)||(46110230-46110291)
chr4 (276-417)||(46415725-46415866)
chr4 (298-420)||(50799986-50800106)
chr4 (353-391)||(53792593-53792631)
chr4 (354-399)||(2592320-2592365)
chr4 (352-397)||(5131259-5131304)
chr4 (354-399)||(14011248-14011293)
chr4 (361-398)||(30377433-30377470)
chr4 (352-413)||(34398694-34398755)
chr4 (344-413)||(35405947-35406016)
chr4 (358-420)||(44638187-44638250)
chr4 (260-385)||(51560207-51560331)
chr4 (266-334)||(3549479-3549547)
chr4 (352-420)||(8468941-8469009)
chr4 (350-406)||(24169270-24169326)
chr4 (287-331)||(24718746-24718790)
chr4 (321-421)||(28300278-28300377)
chr4 (260-336)||(42641416-42641492)
chr4 (377-413)||(44797886-44797922)
chr4 (350-406)||(49803215-49803271)
chr4 (361-413)||(52259631-52259683)
[»] chr6 (40 HSPs)
chr6 (283-407)||(10031738-10031861)
chr6 (315-421)||(20368153-20368258)
chr6 (276-417)||(35070401-35070541)
chr6 (366-421)||(31812036-31812091)
chr6 (315-420)||(4006707-4006811)
chr6 (308-420)||(34910374-34910486)
chr6 (352-420)||(2160946-2161014)
chr6 (270-338)||(27857432-27857500)
chr6 (318-418)||(31624085-31624184)
chr6 (350-420)||(6647380-6647450)
chr6 (359-421)||(9093572-9093634)
chr6 (276-338)||(26559173-26559235)
chr6 (258-304)||(31672445-31672491)
chr6 (351-421)||(34430469-34430539)
chr6 (296-381)||(769170-769254)
chr6 (350-411)||(4420645-4420706)
chr6 (359-420)||(33787761-33787822)
chr6 (359-415)||(5564144-5564200)
chr6 (319-383)||(31420975-31421038)
chr6 (267-331)||(34429639-34429703)
chr6 (350-421)||(415296-415367)
chr6 (295-390)||(30863269-30863363)
chr6 (359-405)||(835265-835311)
chr6 (278-388)||(7945820-7945929)
chr6 (352-421)||(29296304-29296371)
chr6 (276-334)||(31774455-31774513)
chr6 (358-420)||(32386578-32386640)
chr6 (290-412)||(34403856-34403977)
chr6 (361-418)||(837234-837291)
chr6 (359-416)||(1497978-1498035)
chr6 (276-317)||(7351605-7351646)
chr6 (352-385)||(9027606-9027639)
chr6 (360-421)||(26694870-26694931)
chr6 (352-405)||(27909647-27909700)
chr6 (352-413)||(32386115-32386176)
chr6 (353-421)||(1401101-1401169)
chr6 (363-407)||(2205610-2205654)
chr6 (321-413)||(2455259-2455351)
chr6 (259-311)||(4325222-4325274)
chr6 (353-389)||(7785754-7785790)
[»] chr2 (74 HSPs)
chr2 (259-334)||(41170688-41170763)
chr2 (276-406)||(8017441-8017570)
chr2 (263-421)||(40158710-40158867)
chr2 (290-399)||(12313121-12313229)
chr2 (267-399)||(33192216-33192346)
chr2 (350-406)||(35379023-35379079)
chr2 (350-421)||(1625892-1625963)
chr2 (298-399)||(43199740-43199840)
chr2 (361-421)||(43985021-43985081)
chr2 (260-421)||(33941901-33942058)
chr2 (347-413)||(16867739-16867805)
chr2 (278-336)||(40776033-40776091)
chr2 (343-404)||(44443330-44443391)
chr2 (295-391)||(5902502-5902597)
chr2 (276-420)||(14666541-14666684)
chr2 (313-389)||(28677630-28677705)
chr2 (368-420)||(36863650-36863702)
chr2 (259-331)||(44064517-44064589)
chr2 (313-381)||(44606081-44606148)
chr2 (261-336)||(4350766-4350841)
chr2 (362-421)||(9477944-9478003)
chr2 (350-413)||(38078417-38078480)
chr2 (350-421)||(43911006-43911077)
chr2 (296-406)||(8187407-8187516)
chr2 (276-334)||(29430836-29430894)
chr2 (350-391)||(7928306-7928347)
chr2 (358-419)||(44590028-44590089)
chr2 (353-421)||(656787-656855)
chr2 (361-421)||(1810657-1810716)
chr2 (276-420)||(14299565-14299708)
chr2 (351-407)||(15977991-15978047)
chr2 (353-413)||(18840796-18840856)
chr2 (361-413)||(29510592-29510644)
chr2 (284-420)||(35485910-35486045)
chr2 (323-391)||(36043926-36043994)
chr2 (361-421)||(40279189-40279249)
chr2 (304-421)||(2142645-2142763)
chr2 (350-413)||(9174815-9174878)
chr2 (261-336)||(11513972-11514047)
chr2 (284-407)||(15120189-15120311)
chr2 (284-383)||(16551782-16551880)
chr2 (350-413)||(29316782-29316845)
chr2 (350-421)||(29628750-29628821)
chr2 (361-420)||(39983335-39983394)
chr2 (325-412)||(40279268-40279355)
chr2 (325-412)||(40279338-40279425)
chr2 (350-413)||(41851535-41851598)
chr2 (354-412)||(3078651-3078709)
chr2 (351-413)||(6772528-6772590)
chr2 (352-418)||(10563567-10563633)
chr2 (351-413)||(11488277-11488339)
chr2 (284-338)||(12140606-12140660)
chr2 (276-338)||(13866952-13867014)
chr2 (284-338)||(40145526-40145580)
chr2 (295-397)||(41809198-41809299)
chr2 (329-410)||(1056116-1056196)
chr2 (348-381)||(1493518-1493551)
chr2 (351-412)||(7871644-7871705)
chr2 (346-415)||(12289795-12289864)
chr2 (340-389)||(19333322-19333371)
chr2 (350-391)||(35378539-35378580)
chr2 (347-412)||(39236499-39236564)
chr2 (359-412)||(40279408-40279461)
chr2 (259-336)||(40400817-40400894)
chr2 (325-410)||(43065433-43065517)
chr2 (263-336)||(43530032-43530105)
chr2 (351-407)||(3227691-3227747)
chr2 (353-413)||(6227751-6227811)
chr2 (352-404)||(9530737-9530789)
chr2 (361-421)||(14364197-14364257)
chr2 (360-408)||(24097813-24097861)
chr2 (350-418)||(33942145-33942213)
chr2 (352-404)||(34652045-34652097)
chr2 (278-330)||(34927045-34927097)
[»] chr8 (51 HSPs)
chr8 (350-420)||(9956821-9956891)
chr8 (276-385)||(6950350-6950458)
chr8 (261-338)||(2487927-2488004)
chr8 (259-336)||(16162836-16162913)
chr8 (259-418)||(7918699-7918848)
chr8 (350-413)||(27028831-27028894)
chr8 (295-413)||(7714242-7714359)
chr8 (350-404)||(42215089-42215143)
chr8 (296-413)||(778389-778505)
chr8 (276-421)||(34849095-34849240)
chr8 (350-406)||(20672757-20672813)
chr8 (352-420)||(28769348-28769416)
chr8 (350-410)||(30918116-30918176)
chr8 (351-419)||(43717945-43718013)
chr8 (276-331)||(1664450-1664505)
chr8 (308-406)||(779027-779124)
chr8 (350-420)||(30389092-30389162)
chr8 (276-406)||(44236757-44236886)
chr8 (353-410)||(4762512-4762569)
chr8 (352-421)||(8062321-8062390)
chr8 (352-413)||(11569466-11569527)
chr8 (352-421)||(31862485-31862554)
chr8 (352-421)||(38421256-38421325)
chr8 (284-413)||(43504751-43504879)
chr8 (350-414)||(1930034-1930098)
chr8 (353-413)||(11745662-11745722)
chr8 (353-413)||(27754404-27754464)
chr8 (352-420)||(31705078-31705146)
chr8 (356-420)||(31804467-31804531)
chr8 (276-331)||(1892158-1892213)
chr8 (295-407)||(12851182-12851295)
chr8 (350-413)||(33714243-33714306)
chr8 (350-412)||(2595004-2595066)
chr8 (276-330)||(4560584-4560638)
chr8 (350-420)||(5069690-5069760)
chr8 (308-410)||(7918412-7918513)
chr8 (350-420)||(8060662-8060732)
chr8 (350-396)||(21653098-21653144)
chr8 (347-413)||(37353253-37353319)
chr8 (351-421)||(38648343-38648413)
chr8 (361-418)||(6864477-6864534)
chr8 (351-404)||(11494155-11494208)
chr8 (359-420)||(11795085-11795146)
chr8 (281-330)||(13652298-13652347)
chr8 (281-330)||(13710941-13710990)
chr8 (276-413)||(30191075-30191211)
chr8 (352-413)||(30277254-30277315)
chr8 (276-413)||(39551143-39551279)
chr8 (268-336)||(2213484-2213552)
chr8 (350-414)||(11185220-11185284)
chr8 (360-412)||(39881769-39881821)
[»] chr3 (59 HSPs)
chr3 (285-406)||(30573857-30573977)
chr3 (284-420)||(43115049-43115184)
chr3 (260-323)||(30657375-30657438)
chr3 (315-421)||(39602183-39602288)
chr3 (313-413)||(21367667-21367767)
chr3 (259-336)||(44014715-44014792)
chr3 (276-388)||(24281072-24281183)
chr3 (350-418)||(40665424-40665492)
chr3 (350-421)||(402549-402620)
chr3 (301-420)||(14548680-14548798)
chr3 (308-411)||(54837000-54837102)
chr3 (276-334)||(41848650-41848708)
chr3 (296-421)||(45541563-45541687)
chr3 (321-421)||(1816575-1816674)
chr3 (366-413)||(18405854-18405901)
chr3 (350-413)||(20669172-20669235)
chr3 (350-413)||(25776117-25776180)
chr3 (350-413)||(33883757-33883820)
chr3 (350-417)||(34610813-34610880)
chr3 (350-413)||(36887504-36887567)
chr3 (307-406)||(37273141-37273239)
chr3 (311-414)||(51130749-51130851)
chr3 (350-413)||(53789468-53789531)
chr3 (352-418)||(1217809-1217875)
chr3 (352-406)||(2719475-2719529)
chr3 (260-420)||(11253495-11253653)
chr3 (260-328)||(25459548-25459616)
chr3 (353-421)||(34382934-34383002)
chr3 (352-404)||(34924547-34924599)
chr3 (311-391)||(47249455-47249534)
chr3 (300-396)||(47513670-47513765)
chr3 (350-413)||(39980729-39980792)
chr3 (353-412)||(41633361-41633420)
chr3 (276-383)||(42745068-42745174)
chr3 (258-305)||(44237524-44237571)
chr3 (261-420)||(48286729-48286887)
chr3 (361-411)||(2825149-2825199)
chr3 (321-419)||(24085316-24085414)
chr3 (284-338)||(50211809-50211863)
chr3 (313-419)||(50600149-50600254)
chr3 (350-420)||(52618996-52619066)
chr3 (355-420)||(1125778-1125843)
chr3 (307-388)||(21574515-21574595)
chr3 (352-413)||(25185985-25186046)
chr3 (260-333)||(35903085-35903158)
chr3 (276-317)||(40665514-40665555)
chr3 (351-420)||(44061032-44061100)
chr3 (352-389)||(48991875-48991912)
chr3 (352-404)||(16790387-16790439)
chr3 (352-396)||(21862184-21862228)
chr3 (373-413)||(22203430-22203470)
chr3 (352-420)||(23785248-23785316)
chr3 (350-406)||(24785212-24785268)
chr3 (276-328)||(25447625-25447677)
chr3 (267-383)||(26330248-26330363)
chr3 (352-388)||(34414793-34414829)
chr3 (286-338)||(48397651-48397703)
chr3 (276-336)||(49465599-49465659)
chr3 (281-341)||(50015957-50016017)
[»] scaffold0286 (1 HSPs)
scaffold0286 (352-420)||(16103-16171)
[»] scaffold0199 (1 HSPs)
scaffold0199 (276-331)||(6891-6946)
[»] scaffold0141 (1 HSPs)
scaffold0141 (276-338)||(9712-9774)
[»] scaffold0147 (1 HSPs)
scaffold0147 (350-399)||(4942-4991)
[»] scaffold0064 (1 HSPs)
scaffold0064 (259-324)||(53758-53823)
[»] scaffold0003 (1 HSPs)
scaffold0003 (352-410)||(306329-306387)


Alignment Details
Target: chr5 (Bit Score: 379; Significance: 0; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 20 - 421
Target Start/End: Complemental strand, 7908275 - 7907873
Alignment:
Q  20 tacataaaatagcatgtatatagccgtcataccaaaaccaattagtcataaattttttgtaattgaattgaacatacgtaatattgaaaaacagaacaac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7908275 tacataaaatagcatgtatatagccgtcataccaaaaccaattagtcataaattttttgtaattgaattgaacatacgtaatattaaaaaacagaacaac 7908176  T
Q  120 atgaacctgcaagaaaataacat-gaatgaaggaacatacctgctgaattgcaccaggaccaaactgtggaaagcaatgtgggatacctccactgttcca 218  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7908175 atgaacttgcaagaaaataacattgaatgaaggaacatacctgctgaattgcaccaggaccaaactgtggaaagcaatgtgggatacctccactgttcca 7908076  T
Q  219 gaagaaaattaatcagtatccaagggatcccaaatgagaacctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttg 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  7908075 gaagaaaattaatcagtatccaagggatcccaaatgagaacctgtttgaattggttcatttgagtttatctaataacataaacacttatgagactgtttg 7907976  T
Q  319 gaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7907975 gaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 7907876  T
Q  419 tac 421  Q
    |||    
T  7907875 tac 7907873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 308 - 421
Target Start/End: Complemental strand, 2568762 - 2568650
Alignment:
Q  308 gagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 407  Q
    |||| ||||| |||||||||||||||||| | || ||| ||||||||||||| |||| |||||| |||||| ||||||||| || ||||||| |||||||    
T  2568762 gagactgtttagaagaacttatgaaaacagctta-tgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaa 2568664  T
Q  408 cttataacttatac 421  Q
    |||||| |||||||    
T  2568663 cttatagcttatac 2568650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 412
Target Start/End: Original strand, 17258817 - 17258952
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| ||||| |||||||||| ||||| ||| ||| ||||| ||||| |||||||| | | || ||| || |||||||| ||||||||||||| |||    
T  17258817 atttgagcttatcaactaacataagcacttgtgacattctttgggagaacctatgaaaatagctta-tgacatgttcataagctgttttcagcttatttt 17258915  T
Q  376 cataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||||||| || || || |||| |||||| |||||    
T  17258916 cataagctcttcaggatagtttatgaaaacagcttat 17258952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 10272442 - 10272509
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||||||||| |||||||| ||||||||||  |||||| ||||||||||||| |||||||    
T  10272442 taagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatac 10272509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 278 - 421
Target Start/End: Complemental strand, 34975498 - 34975356
Alignment:
Q  278 ttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttca 377  Q
    ||||| |||||||||||||||| ||||||||||| |||||| |||| || ||  |||||  ||| ||| |||| ||||| | |||||||||||| || ||    
T  34975498 ttgagcttatctactaacataatcacttatgagactgtttgaaagagctcatccaaacatagta-tgacatatccataaatcgttttcagcttatttcca 34975400  T
Q  378 taagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    | ||||||||| || ||||||  ||||||| ||||| |||||||    
T  34975399 ttagctctccaggatagcttacgaaaacaatttatagcttatac 34975356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 413
Target Start/End: Original strand, 12459943 - 12460071
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 383  Q
    |||||| || |||||| ||| | ||||| ||||||| ||||| |||||||||||| || ||| || |||||| ||||||||  ||||| |||||||||||    
T  12459943 ttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaactta-tgacatgttcatatgttgtttttggcttattttcataagct 12460041  T
Q  384 ctccaagacagcttatcaaaacaacttata 413  Q
    || ||||| ||||| | || ||||||||||    
T  12460042 ctgcaagatagcttgtgaagacaacttata 12460071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 407
Target Start/End: Original strand, 37611175 - 37611279
Alignment:
Q  302 acttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatca 401  Q
    |||| ||||||||||||  ||| |||||||||||||| |  ||| || |||||||| ||||||||| ||| || |||||||||||||||| ||||||| |    
T  37611175 acttgtgagattgtttgagagagcttatgaaaacaacttg-tgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatga 37611273  T
Q  402 aaacaa 407  Q
    ||||||    
T  37611274 aaacaa 37611279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 407
Target Start/End: Original strand, 37787905 - 37788009
Alignment:
Q  302 acttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatca 401  Q
    |||| ||||||||||||  ||| |||||||||||||| |  ||| || |||||||| ||||||||| ||| || |||||||||||||||| ||||||| |    
T  37787905 acttgtgagattgtttgagagagcttatgaaaacaacttg-tgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatga 37788003  T
Q  402 aaacaa 407  Q
    ||||||    
T  37788004 aaacaa 37788009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 413
Target Start/End: Original strand, 16937799 - 16937953
Alignment:
Q  258 acctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactga-aatattcataa 356  Q
    ||||||||| ||||| | ||||||| |||||||||| |||||    || ||||| |||||||||||||||||||||||| | || ||| ||  |||||||    
T  16937799 acctgtttggattggcttatttgagcttatctactagcataagtt-ttgtgagagtgtttggaagaacttatgaaaacagctta-tgacaaatttcataa 16937896  T
Q  357 gttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    | | ||||||||||| |||| |||| ||||||| | ||| ||| |||||||||||||    
T  16937897 gcttttttcagcttattttcctaagttctccaatatagcgtataaaaacaacttata 16937953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 413
Target Start/End: Complemental strand, 17368767 - 17368676
Alignment:
Q  321 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||||| || ||| || |||||| |  |||||||||||| || ||||| |||||||||| ||||||| |||||||||||||    
T  17368767 agaacttatgaaaacaactta-tgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttata 17368676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 420
Target Start/End: Original strand, 18543210 - 18543273
Alignment:
Q  356 agttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||| ||||||    
T  18543210 agttgttttcagctta-tttcataagctctccaggatagcttatgaaaacaacttatatcttata 18543273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 412
Target Start/End: Original strand, 4014431 - 4014493
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| |||||| |||||    
T  4014431 ttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttat 4014493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 13244485 - 13244547
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||||||||||||| | | |||||||||||||| | ||||||||||| ||||||||||||||    
T  13244485 atttgagtttatctattgaaataaacacttatgacactgtttggaagagcttatgaaaacaac 13244547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 33533543 - 33533609
Alignment:
Q  347 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||||||| |||| || |||||||||||||||| ||||| | |||||| ||||||    
T  33533543 atattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttata 33533609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 388
Target Start/End: Original strand, 10125643 - 10125763
Alignment:
Q  267 aattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttca 366  Q
    |||||| | |||| || ||||||||| |||| | ||||| ||| ||||| ||  |||||||||| ||||||| || ||| || || ||||| ||||||||    
T  10125643 aattggcttatttaagcttatctactgacatgagcacttgtgacattgtctgagagaacttatgtaaacaactta-tgacatgttgataaggtgttttca 10125741  T
Q  367 gcttaatttcataagctctcca 388  Q
    ||||| ||||||||||||||||    
T  10125742 gcttattttcataagctctcca 10125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 420
Target Start/End: Original strand, 37526164 - 37526276
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||| ||||||  ||| |||||||| ||||| || ||| || || ||||| ||||||||||||| || |||||||||||||  ||| ||||| ||||||    
T  37526164 tgagactgtttgagagagcttatgaatacaaccta-tgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaaca 37526262  T
Q  407 acttataacttata 420  Q
    ||||||| ||||||    
T  37526263 acttatagcttata 37526276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 420
Target Start/End: Original strand, 37588325 - 37588437
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||| ||||||  ||| |||||||| ||||| || |||||| || ||||| ||||||||||||| || |||||||||||||  | | ||||| ||||||    
T  37588325 tgagactgtttgagagagcttatgaatacaaccta-tgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaaca 37588423  T
Q  407 acttataacttata 420  Q
    ||||||| ||||||    
T  37588424 acttatagcttata 37588437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 11707115 - 11707055
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||||||||||| ||||| ||||||| ||||| ||||||| |||||| ||||||    
T  11707115 ataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaacagcttata 11707055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 12425631 - 12425563
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||||| |||| ||||||||| ||||||||| ||||| | |||||| |||||| |||||||    
T  12425631 ataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatac 12425563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 406
Target Start/End: Complemental strand, 7674753 - 7674655
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||| || ||||||||||||||| ||||||| || ||| || || ||||| ||||||||||||| ||||| ||  ||||||||| ||||||| ||||||    
T  7674753 tgagactgcttggaagaacttatggaaacaactta-tgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaaca 7674655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 8090064 - 8089958
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 383  Q
    ||||||||||||| || ||||   |||| | ||||  ||| |||||||||||||| || ||| |||||| |||| ||||||||||||| |||||||||||    
T  8090064 ttatctactaacacaagcactcgcgagactatttgagagagcttatgaaaacaactta-tgatatattcctaagctgttttcagcttattttcataagct 8089966  T
Q  384 ctccaaga 391  Q
    || |||||    
T  8089965 cttcaaga 8089958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 407
Target Start/End: Original strand, 12242723 - 12242774
Alignment:
Q  356 agttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 407  Q
    |||||||||||||||| || |||||||||||||||| ||||||| |||||||    
T  12242723 agttgttttcagcttacttccataagctctccaagatagcttatgaaaacaa 12242774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 36318833 - 36318766
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||| ||||||||||||| || |||||  ||||||||| ||||||| ||||||||||| |||||||||    
T  36318833 taagctgttttcagcttatttacataaattctccaagatagcttatgaaaacaacttaaaacttatac 36318766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 36326070 - 36326003
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||||||||| || |||||  ||||||||| ||||||  ||| |||||||||||||||||    
T  36326070 taagttgttttcagcttatttacataaattctccaagatagcttacgaaagcaacttataacttatac 36326003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 7319017 - 7319071
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||||||||| |||||||| ||||||||| ||||||||| ||||||| ||||||    
T  7319017 cataagttgttctcagcttattttcataagttctccaagatagcttatgaaaaca 7319071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 413
Target Start/End: Original strand, 18857358 - 18857470
Alignment:
Q  302 acttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataag--ctctccaagacagcttat 399  Q
    |||| ||||| || || |||||| ||||||||||| | || ||| || |||||||| |||||| | |||||||||||||   ||||||||||||||||||    
T  18857358 acttgtgagaatgcttagaagaatttatgaaaacagc-taatgacatgttcataagctgtttttaacttaatttcataacacctctccaagacagcttat 18857456  T
Q  400 caaaacaacttata 413  Q
     |||||| ||||||    
T  18857457 gaaaacagcttata 18857470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 35095721 - 35095774
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatg 330  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||    
T  35095721 atttgagtttatctactaa-ataaacactaatgagactgtttggaagagcttatg 35095774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 386
Target Start/End: Original strand, 41112832 - 41112941
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| |||||||||  ||||||||||| ||| ||||| ||| |||||||||||||| | | | |||| || ||| |||  ||||||| ||||| |||    
T  41112832 atttgagcttatctacttgcataaacacttgtgacattgtctggcagaacttatgaaaatagc-ttctgacatgttcgtaatctgttttcggcttatttt 41112930  T
Q  376 cataagctctc 386  Q
    |||||||||||    
T  41112931 cataagctctc 41112941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 418
Target Start/End: Original strand, 41957460 - 41957526
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    ||||||||||||||| |||| ||||||||| |||| | || ||||||| |||||| |||||||||||    
T  41957460 cataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataactta 41957526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 36542205 - 36542258
Alignment:
Q  261 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattg 314  Q
    |||||||||||| |  |||||| |||||||||||||||| ||||||||||||||    
T  36542205 tgtttgaattggcttgtttgagcttatctactaacataagcacttatgagattg 36542258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 421
Target Start/End: Original strand, 6587078 - 6587185
Alignment:
Q  313 tgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    ||||||||||||||||  |||||| | || ||| |  |||||||| ||||| ||||||| ||||| ||| ||||||  | ||||||| ||||||||||||    
T  6587078 tgtttggaagaacttaaaaaaacagctta-tgacaggttcataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttat 6587176  T
Q  413 aacttatac 421  Q
    | |||||||    
T  6587177 agcttatac 6587185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 6593351 - 6593299
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||| |||||||||||||| |||  |||||||||||||| ||||||    
T  6593351 ttttcagcttattttcataagctctctaaggtagcttatcaaaacagcttata 6593299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 12975407 - 12975340
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||||||| |||| || |||||||||||||||| ||||||| || ||| |||||| ||||||    
T  12975407 cataagttgttttcaactta-ttccataagctctccaagatagcttatgaacacagcttatagcttata 12975340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 413
Target Start/End: Complemental strand, 17827615 - 17827524
Alignment:
Q  321 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| ||||||||| || |||||| ||| ||| || ||||||||||| |||| ||| ||||| |||| ||||||  |||||||||||||    
T  17827615 agaacttaggaaaacaactta-tgaaatgttcgtaaattattttcagcttattttcgtaacctctctaagatagcttacaaaaacaacttata 17827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 421
Target Start/End: Complemental strand, 25461143 - 25461083
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||||||| |||||| || ||||||| | ||||||| ||||||||||||||| |||||    
T  25461143 ttttcagcttattttcatcagttctccaatagagcttatgaaaacaacttataacatatac 25461083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 420
Target Start/End: Complemental strand, 32172789 - 32172646
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| |||| ||||| ||||| ||||| |||||| |||||| ||| |||||| ||||||| || ||| || | ||||||   ||||||||||| ||     
T  32172789 atttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaactta-tgacatgtccataagccattttcagcttatttc 32172691  T
Q  376 cataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||| || ||| || || ||||||| |||||| |||||| ||||||    
T  32172690 cattagttcttcatgatagcttatgaaaacagcttatagcttata 32172646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 32194088 - 32194156
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||||||| ||  |||||||||| |||| ||||||  |||||| |||||| ||||||    
T  32194088 cataagttgttttcagcttatttatataagctctcaaagatagcttaaaaaaacatcttatagcttata 32194156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 418
Target Start/End: Original strand, 1465028 - 1465094
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    ||||||||||||||||||||| ||||| |||  |||||||| ||||||| |||| |||||||| ||||    
T  1465028 tcataagttgttttcagcttattttcacaagtcctccaagatagcttat-aaaataacttatagctta 1465094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 3237160 - 3237093
Alignment:
Q  346 aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||| |||||| || |||||||||||||  | || ||||||| |||||| ||||||    
T  3237160 aatattcataagttgtgttcagcatattttcataagctctttaggatagcttatgaaaacagcttata 3237093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 7985032 - 7984969
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| ||||||||||||| ||||||||  ||||||||| ||||||| |||| | ||||||    
T  7985032 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaaaagcttata 7984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 417
Target Start/End: Complemental strand, 29659410 - 29659347
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 417  Q
    |||||||||||||||||| ||  |||| ||||| |||| | ||||| |||||||||||||||||    
T  29659410 taagttgttttcagcttatttatataaactctctaagataacttatgaaaacaacttataactt 29659347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 420
Target Start/End: Original strand, 31030148 - 31030207
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||| || ||||||||||||| |||||||||  ||||| ||||||| ||||||    
T  31030148 ttttcagcttatttccataagctctccaggacagcttaggaaaactacttatagcttata 31030207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 420
Target Start/End: Original strand, 34117566 - 34117613
Alignment:
Q  373 tttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||||||||||| ||||||| ||| ||||||||| ||||||    
T  34117566 tttcataagctctccaagatagcttatgaaagcaacttatagcttata 34117613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 413
Target Start/End: Complemental strand, 43300929 - 43300878
Alignment:
Q  362 tttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||| ||||||||| ||||||||| ||||||  |||||||||||||    
T  43300929 tttcagcttattttcataagttctccaagatagcttacaaaaacaacttata 43300878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 1962051 - 1961993
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 334  Q
    ||||||||||||||||| | |||||||||| ||||| |||| |||| | ||||||||||    
T  1962051 atttgagtttatctactcatataaacacttgtgagaatgttcggaatagcttatgaaaa 1961993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 412
Target Start/End: Complemental strand, 3977422 - 3977309
Alignment:
Q  298 aaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagctt 397  Q
    |||||||| ||||||||||| ||| |||||||||||||| | || ||| || ||| | || ||| ||||||||| ||||||||  ||||||  ||| |||    
T  3977422 aaacacttgtgagattgtttagaaaaacttatgaaaacagctta-tgacatgttccttagctgtcttcagcttattttcataatttctccacaacaactt 3977324  T
Q  398 atcaaaacaacttat 412  Q
    || |||||| |||||    
T  3977323 atgaaaacagcttat 3977309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 418
Target Start/End: Complemental strand, 6183497 - 6183439
Alignment:
Q  360 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    |||||||||||| || |||||||||||||| ||||||||| || ||| |||||| ||||    
T  6183497 gttttcagcttatttccataagctctccaaaacagcttatgaatacagcttatagctta 6183439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 36639583 - 36639529
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||||||||||||  |||| ||||||||||||| ||||| ||||||| ||||||    
T  36639583 cataagttgttttcctcttattttcataagctcttcaagatagcttatgaaaaca 36639529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 38104867 - 38104913
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttat 399  Q
    ||||||||||||||||||| || ||||||||||| |||| |||||||    
T  38104867 ataagttgttttcagcttatttccataagctctctaagatagcttat 38104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 414
Target Start/End: Complemental strand, 1916362 - 1916246
Alignment:
Q  294 acataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagaca 393  Q
    ||||||||||||  ||||||||||| |||| ||| |||||||||| || | | ||||  ||||||| |||||||||| ||||| |||  ||||||||| |    
T  1916362 acataaacactt--gagattgtttgaaagagcttgtgaaaacaactta-taatatatctataagttattttcagctt-atttcctaaaatctccaagata 1916267  T
Q  394 gcttatcaaaacaacttataa 414  Q
    | | || ||||||||||||||    
T  1916266 gttcatgaaaacaacttataa 1916246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 417
Target Start/End: Complemental strand, 18875422 - 18875357
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 417  Q
    ||||||||||||||| |||  || ||||||||||||| || | ||||| |||||| ||||||||||    
T  18875422 cataagttgttttcaacttgtttccataagctctccaggatatcttattaaaacagcttataactt 18875357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 413
Target Start/End: Complemental strand, 31694579 - 31694518
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||||||| |||| ||||||||||||| ||||  ||||||  | |||||||||||    
T  31694579 cataagttgttttcaacttattttcataagctctacaagtgagcttaagagaacaacttata 31694518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 420
Target Start/End: Complemental strand, 34245770 - 34245717
Alignment:
Q  367 gcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||| |||||| ||||||||| || ||||||| ||||||||||||| ||||||    
T  34245770 gcttattttcatcagctctccatgatagcttataaaaacaacttatagcttata 34245717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 419
Target Start/End: Complemental strand, 39594866 - 39594801
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 419  Q
    |||||||||||||||||| ||||||||| ||  ||||| | ||||| |||||| |||| |||||||    
T  39594866 taagttgttttcagcttattttcataagttcaacaagatatcttatgaaaacagcttacaacttat 39594801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 388
Target Start/End: Original strand, 8177541 - 8177577
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctcca 388  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  8177541 cataagttgttttcaggttattttcataagctctcca 8177577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 11095413 - 11095489
Alignment:
Q  260 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    ||||||| | ||||| |||| || ||||||||| |||||||||||| ||| ||||||||  ||||||| || |||||    
T  11095413 ctgtttggactggtttatttaagcttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaaca 11095489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 414
Target Start/End: Complemental strand, 11700214 - 11700162
Alignment:
Q  362 tttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 414  Q
    ||||| |||| ||||||||| |||||| || ||| ||||||||||||||||||    
T  11700214 tttcatcttattttcataagttctccacgatagcatatcaaaacaacttataa 11700162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 413
Target Start/End: Complemental strand, 29925940 - 29925841
Alignment:
Q  314 gtttggaagaacttatgaaaacaacgtactga-aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||| |||||||||||||||| | || ||| ||| |||||  ||| |||||| |||| ||||||||| ||||||| | |||||||  |||||||||||    
T  29925940 gtttgggagaacttatgaaaacagctta-tgacaatgttcatgtgtttttttcaacttattttcataagttctccaatatagcttatgtaaacaacttat 29925842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 40205090 - 40205142
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 411  Q
    ||||||||||||| ||  |||||||||||| || ||||||| |||||||||||    
T  40205090 tgttttcagcttatttctataagctctccaggatagcttatgaaaacaactta 40205142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 258 - 415
Target Start/End: Original strand, 24363516 - 24363673
Alignment:
Q  258 acctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataag 357  Q
    ||||||||| |||| || |||||||||||||||||| ||||| |||||||||||| |||||| ||  |||| | |||||| ||| ||| || | ||||||    
T  24363516 acctgtttggattgttttatttgagtttatctactagcataagcacttatgagatagtttgggaggccttaaggaaacaaggtattgacatgtccataag 24363615  T
Q  358 ttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataac 415  Q
    |||||||||||||| || ||||| ||||||| || ||||||| |||||||||||||||    
T  24363616 ttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttataac 24363673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 307 - 413
Target Start/End: Original strand, 19022549 - 19022655
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactga-aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaac 405  Q
    ||||||||||||| |||| ||||||||||||| || ||| ||| |||||||||||| |||| |||| ||||||||| ||||||| | ||||||| |||||    
T  19022549 tgagattgtttgggagaatttatgaaaacaactta-tgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaac 19022647  T
Q  406 aacttata 413  Q
    ||||||||    
T  19022648 aacttata 19022655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 406
Target Start/End: Complemental strand, 7244816 - 7244687
Alignment:
Q  277 tttgagtttatctactaacataaacacttatgagatt-gtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||||||||||||  ||||||||||| | ||||| ||||| |||| || ||| ||||||  || ||| ||  ||||||||||||||||||||| |||    
T  7244816 tttgagtttatctactgccataaacacttctaagatttgtttgaaagagctgatggaaacaattta-tgacatgctcataagttgttttcagcttatttt 7244718  T
Q  376 cataagctctccaagacagcttatcaaaaca 406  Q
    |||||||||||||| | ||||||| ||||||    
T  7244717 cataagctctccaatatagcttatgaaaaca 7244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 413
Target Start/End: Complemental strand, 30535715 - 30535563
Alignment:
Q  260 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagtt 359  Q
    ||||||||||||  | ||||||||| || |||| ||||||||||||  |||| ||||| | |||||||||||||||||| || ||| || ||| |||| |    
T  30535715 ctgtttgaattgacttatttgagttaatttactgacataaacacttgagagactgttttggagaacttatgaaaacaactta-tgatatgttcgtaagct 30535617  T
Q  360 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| ||| ||||||| | |||  |||| |||||||  ||||| ||||||    
T  30535616 gttttcaggttattttcatatgttctataagatagcttatggaaacagcttata 30535563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 413
Target Start/End: Complemental strand, 34744182 - 34744028
Alignment:
Q  258 acctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactga-aatattcataa 356  Q
    ||||||||||||||  | ||||||| |||||||||||||| || | || ||||| |||||||||||||| ||||||| ||| || ||| ||| |||| ||    
T  34744182 acctgtttgaattgaataatttgagcttatctactaacat-aagatttgtgagactgtttggaagaactaatgaaaagaactta-tgacaattttcacaa 34744085  T
Q  357 gttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    | | |||||  |||| ||| ||||| ||||||| | ||||||| |||||||||||||    
T  34744084 gcttttttcgccttatttttataagttctccaatatagcttatgaaaacaacttata 34744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 278 - 420
Target Start/End: Original strand, 25670522 - 25670663
Alignment:
Q  278 ttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttca 377  Q
    ||||| ||||||| | |||||| | ||| ||||| ||||||  | |||||||||||||||| || ||| || || |||| |||||||||||||| |||||    
T  25670522 ttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaactta-tgacatgttaataaattgttttcagcttattttca 25670620  T
Q  378 taagctctccaagacagcttatcaaaacaacttataacttata 420  Q
     ||||||||||||| |  |||| ||||||| | ||| ||||||    
T  25670621 caagctctccaagatatgttataaaaacaattgatagcttata 25670663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 388
Target Start/End: Complemental strand, 23214983 - 23214880
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 383  Q
    |||||||||| ||||||||||||||||| ||||||  |||| ||||||||||||| || ||| || | |||||| | | |||||||||  |||||||| |    
T  23214983 ttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaactta-tgacatttccataagctctattcagcttatgttcataagat 23214885  T
Q  384 ctcca 388  Q
    |||||    
T  23214884 ctcca 23214880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 24967196 - 24967097
Alignment:
Q  277 tttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttc 376  Q
    |||||| ||||||||||  ||||||| |||||||| |||||||||||  ||||| ||||||| || | | |||| || ||||||||||||||||| ||||    
T  24967196 tttgagcttatctactagtataaacatttatgagactgtttggaagagattatggaaacaactta-taacatatccagaagttgttttcagcttattttc 24967098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 44822019 - 44821951
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||||| |||| ||||||||| ||||||  | ||||||| |||||| ||||||||||||||    
T  44822019 ataagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatac 44821951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 420
Target Start/End: Complemental strand, 46082189 - 46082027
Alignment:
Q  259 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagt 358  Q
    |||||||| ||||| | ||||||  ||| |||||  |||||||| || ||||| ||||    ||| |||||||||||||| || ||| ||   |||||||    
T  46082189 cctgtttggattggctaatttgatcttacctactggcataaacaattttgagactgttaatgagagcttatgaaaacaactta-tgacatgaccataagt 46082091  T
Q  359 tgttttcagcttaatttcataagctctccaagacagc--ttatcaaaacaacttataacttata 420  Q
    ||||||||||||| ||||||||||||||||  | |||   ||| ||||||||||||||||||||    
T  46082090 tgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataacttata 46082027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 48917362 - 48917414
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 411  Q
    ||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  48917362 tgtttccagcttattttcataagctctccaagatagcttatgaaaacaactta 48917414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 36538025 - 36537951
Alignment:
Q  295 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagctt 370  Q
    ||||||||||| ||||||||||||  |||||||||| ||||||| || ||| || ||||||||||||||| |||||    
T  36538025 cataaacacttgtgagattgtttgagagaacttatggaaacaactta-tgacatgttcataagttgtttttagctt 36537951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 421
Target Start/End: Complemental strand, 753118 - 752961
Alignment:
Q  263 tttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgtt 362  Q
    ||||| |||| | ||||||| |||||||||  ||||| ||| | | ||| || ||| |||||||||||||||||   || ||| ||||  ||||| ||||    
T  753118 tttgatttggcttatttgagcttatctacttgcataagcacctctaagactgattgaaagaacttatgaaaacagttta-tgacatatcaataagctgtt 753020  T
Q  363 ttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    || |||| | ||||||| |||| |||||| || ||||||||||| |||||| |||||||    
T  753019 tttagctaattttcatatgctccccaagatagtttatcaaaacagcttatagcttatac 752961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 413
Target Start/End: Original strand, 2825170 - 2825301
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| ||||||||| | |||| ||||| ||||| | ||||||||||||||||||| || | |      || |||||||||| ||||||||||| ||     
T  2825170 atttgagcttatctacttatataagcacttgtgagactctttggaagaacttatgaaaccatctt------atgttcataagttattttcagcttatttc 2825263  T
Q  376 cataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||| |||| | || ||||| | |||||||||||||    
T  2825264 cataagttctctaggatagcttgtgaaaacaacttata 2825301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 25596092 - 25596042
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 404  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||| ||||    
T  25596092 taagttgttttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 420
Target Start/End: Original strand, 18965726 - 18965787
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||||  |||||||||  |||||||| ||||||| ||||||||||||||| ||||    
T  18965726 tgttttcagcttgttttcataagacctccaagatagcttatgaaaacaacttataacctata 18965787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 413
Target Start/End: Complemental strand, 48470153 - 48470044
Alignment:
Q  304 ttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaa 403  Q
    |||||||||||||||| |||||||||||||||| | ||  | | | |||||||| | |||| ||||||  |||||||| | | ||| | ||||||| |||    
T  48470153 ttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagcttttttgagcttatgttcataagttattcaaaatagcttatgaaa 48470054  T
Q  404 acaacttata 413  Q
    ||||||||||    
T  48470053 acaacttata 48470044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 529438 - 529382
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    |||||||| |||||||| | || ||||||||||||||||||| ||||||| ||||||    
T  529438 ttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaaca 529382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 399
Target Start/End: Original strand, 43250653 - 43250755
Alignment:
Q  295 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacag 394  Q
    ||||||||||| ||| ||||||||| |  ||||||||||||| | || ||| || ||| |||||||||||||| |||  |||||||||||||||| | ||    
T  43250653 cataaacacttgtga-attgtttgggattacttatgaaaacagctta-tgacatgttcgtaagttgttttcagtttatattcataagctctccaaaatag 43250750  T
Q  395 cttat 399  Q
    |||||    
T  43250751 cttat 43250755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 44151489 - 44151557
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||| ||||||||||||| || |||||||| | ||||| || |||| ||||||||||||| ||||||    
T  44151489 cataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttata 44151557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 406
Target Start/End: Complemental strand, 9038228 - 9038119
Alignment:
Q  295 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacag 394  Q
    ||||| ||||||||||| ||||  ||||||||||| |||||| | || ||| || ||||||| |||||||||||||| ||||| ||| |||||| || ||    
T  9038228 cataagcacttatgagaatgttcagaagaacttataaaaacagctta-tgacatgttcataa-ttgttttcagcttattttcacaagttctccatgatag 9038131  T
Q  395 cttatcaaaaca 406  Q
     |||| ||||||    
T  9038130 tttatgaaaaca 9038119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 18350738 - 18350785
Alignment:
Q  374 ttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  18350738 ttcataagctctccatgatagcttatgaaaacagcttataacttatac 18350785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 27378836 - 27378891
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||||||||||||||| ||| |||||||||||||||| || || |||| ||||||    
T  27378836 tcataagttgttttcagtttattttcataagctctccaggatagtttatgaaaaca 27378891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 420
Target Start/End: Original strand, 30456480 - 30456527
Alignment:
Q  373 tttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||||||||||| || |||| ||||| ||||||||||||||    
T  30456480 tttcataagctctccaagatagtttatgaaaaccacttataacttata 30456527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 33601417 - 33601479
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| | |||||||||||| |||||||| |||| |||| ||||||| |||||||||||||    
T  33601417 ttcataagcttttttcagcttaaattcataagttctctaagatagcttat-aaaacaacttata 33601479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 48131454 - 48131415
Alignment:
Q  295 cataaacacttatgagattgtttggaagaacttatgaaaa 334  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  48131454 cataagcacttatgagactgtttggaagaacttatgaaaa 48131415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 305
Target Start/End: Complemental strand, 2895385 - 2895343
Alignment:
Q  263 tttgaattggttcatttgagtttatctactaacataaacactt 305  Q
    ||||||| |||||||||||| |||||||||| |||||||||||    
T  2895385 tttgaatcggttcatttgagattatctactagcataaacactt 2895343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 385
Target Start/End: Original strand, 26935557 - 26935599
Alignment:
Q  343 tgaaatattcataagttgttttcagcttaatttcataagctct 385  Q
    ||||||||||||||| ||||||||||||| || ||||||||||    
T  26935557 tgaaatattcataagctgttttcagcttatttccataagctct 26935599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 406
Target Start/End: Complemental strand, 28614530 - 28614440
Alignment:
Q  316 ttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    |||| |||||||||||||||||| ||    ||| |||| ||| | ||||||| ||||||||||||| ||||||| ||||||| | ||||||    
T  28614530 ttgggagaacttatgaaaacaacatataacaattttcacaagcttttttcagtttaatttcataagttctccaatacagcttttaaaaaca 28614440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 418
Target Start/End: Complemental strand, 32210304 - 32210262
Alignment:
Q  376 cataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||    
T  32210304 cataagctctcaaagatagcttataaaaacaacttataactta 32210262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 414
Target Start/End: Original strand, 47130802 - 47130856
Alignment:
Q  360 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 414  Q
    ||||||| |||| ||||| ||| ||||||||| ||||||| ||||||||||||||    
T  47130802 gttttcaacttattttcacaagttctccaagatagcttatgaaaacaacttataa 47130856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 9423601 - 9423662
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 411  Q
    |||||||||||||||||||||| ||  | |||||||||| || ||||||| |||||| ||||    
T  9423601 ttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaacagctta 9423662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 12792579 - 12792624
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaa 404  Q
    ||||||||||||| ||||||||||||| ||||| ||||||| ||||    
T  12792579 tgttttcagcttattttcataagctcttcaagatagcttatgaaaa 12792624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 420
Target Start/End: Original strand, 46104583 - 46104644
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||| ||||||| ||||||||||||| ||  | ||||||| ||||||||||||| ||||||    
T  46104583 tgtttccagcttattttcataagctcttcagcatagcttatgaaaacaacttatagcttata 46104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 5288247 - 5288195
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaactta 328  Q
    ||||||| | |||||||| ||||| ||||||||||| ||||||| ||||||||    
T  5288247 atttgagctaatctactagcataagcacttatgagactgtttgggagaactta 5288195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 407
Target Start/End: Original strand, 11619131 - 11619222
Alignment:
Q  316 ttggaagaacttatgaaaacaacgtactga-aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 407  Q
    |||| |||| ||||||||||||| || ||| ||| |||||||| | |||||| |||||||||||||| |||||||   ||||||| |||||||    
T  11619131 ttgggagaatttatgaaaacaactta-tgacaattttcataagcttttttcaacttaatttcataagttctccaacgtagcttataaaaacaa 11619222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 15075094 - 15075162
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||| |||||| |||||| || ||||||||||| |||  || |||| |||| |||||||||||||||    
T  15075094 cataagctgtttttagcttatttccataagctctctaaggtagtttatgaaaataacttataacttata 15075162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 421
Target Start/End: Original strand, 17944361 - 17944421
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||||||||||||||||  | ||||||| | ||||| ||||||||||| ||| |||||    
T  17944361 ttttcagcttaatttcataaattatccaagataacttatgaaaacaacttacaacatatac 17944421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 407
Target Start/End: Original strand, 21568459 - 21568559
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||| ||||||| |||||||||||||||| | ||    ||| |||||||| | |||||| |||| || |||||| ||||||| | ||||||| ||||||    
T  21568459 tgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataaaaaca 21568558  T
Q  407 a 407  Q
    |    
T  21568559 a 21568559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 413
Target Start/End: Complemental strand, 39968012 - 39967920
Alignment:
Q  321 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||| | ||  | | | |||||||| |||||||| |||| |||||| || ||||  ||| ||||||| |||||||||||||    
T  39968012 agaacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttata 39967920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 420
Target Start/End: Original strand, 31517674 - 31517817
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| |||| ||||  ||||| ||||| ||||| ||||||| ||||||||| ||||||||  | ||| || |||||||| ||||||||||||| |||    
T  31517674 atttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactca-tgacatgttcataagctgttttcagcttatttt 31517772  T
Q  376 cataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||||||||||| |||| || ||| |||||| ||||||    
T  31517773 cataagctctccaagacagattatgaagacagcttatagcttata 31517817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 413
Target Start/End: Original strand, 7136932 - 7137068
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    |||||||||||||| |  |||||||||||| | | |  ||||| |||||||||||||||   | || ||| ||||||||||||| ||||||||||| |||    
T  7136932 atttgagtttatctcccgacataaacacttgttaaagagtttgaaagaacttatgaaaatcgctta-tgacatattcataagttattttcagcttatttt 7137030  T
Q  376 cataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||| ||||||||| ||||||| |||||| ||||||    
T  7137031 cataagttctccaagatagcttatgaaaacagcttata 7137068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 276 - 404
Target Start/End: Original strand, 10199342 - 10199469
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| |||||||||||||||| ||||| ||| | | ||||| |||||| ||||||| | | || ||| || |||||||||||||||||||||| |||    
T  10199342 atttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagctta-tgacatgttcataagttgttttcagcttatttt 10199440  T
Q  376 cataagctctccaagacagcttatcaaaa 404  Q
    ||||||||||| || | ||||||| ||||    
T  10199441 cataagctctctaaaatagcttatgaaaa 10199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 421
Target Start/End: Complemental strand, 34290302 - 34290228
Alignment:
Q  347 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||| |||||| |||||| |||||||    
T  34290302 atattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttatac 34290228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 389
Target Start/End: Complemental strand, 6292628 - 6292517
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| ||||||||| |||||| ||||| ||||||||||||| |||| || | |||||| | || ||| || |||||||| ||||||||||||| |||    
T  6292628 atttgagcttatctactgacataagcacttttgagattgtttgggagaattttt-aaaacagctta-tgacatgttcataagctgttttcagcttatttt 6292531  T
Q  376 cataagctctccaa 389  Q
    ||||||||||||||    
T  6292530 cataagctctccaa 6292517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 276 - 399
Target Start/End: Original strand, 32515375 - 32515497
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||| ||| |||||| ||||| |||| ||| || |  |||||||||||||| ||||  |     
T  32515375 atttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgta-tgacatgtcaataagttgttttcaacttatatc 32515473  T
Q  376 cataagctctccaagacagcttat 399  Q
     |||||||||||| || |||||||    
T  32515474 tataagctctccatgatagcttat 32515497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 23902076 - 23902144
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||||||| || ||||||||||| |||| ||||| | ||||||||||||| ||||||    
T  23902076 cataagttgttttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttata 23902144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 25479644 - 25479581
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||| |||||||||||||||| |||||||||||||| | || ||||||| |||||||||||||    
T  25479644 ttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttata 25479581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 28689461 - 28689531
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagct--tatcaaaacaacttataacttata 420  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||  ||| ||||||||||||| ||||||    
T  28689461 cataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttata 28689531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 399
Target Start/End: Original strand, 37593618 - 37593740
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| |||| ||||  ||||||||||| | ||| ||||||| | |||| ||||| ||||| || ||| || |||||||| ||||||||||||| |||    
T  37593618 atttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaactta-tgacatgttcataagctgttttcagcttatttt 37593716  T
Q  376 cataagctctccaagacagcttat 399  Q
    |||||||||| ||| | |||||||    
T  37593717 cataagctcttcaaaatagcttat 37593740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 38503472 - 38503535
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||| |  |||||||||||||    
T  38503472 ttcataagttgttttcagcttattttcataagttctccaagatagctaacaaaaacaacttata 38503535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 421
Target Start/End: Complemental strand, 49938853 - 49938739
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactga-aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaac 405  Q
    ||||||||||||| |||||||||||||||| | || ||| ||| |||| ||| | |||||| |||| ||||||||| |||| || | ||||||| |||||    
T  49938853 tgagattgtttgggagaacttatgaaaacagctta-tgacaattttcaaaagcttttttcaacttattttcataagttctctaatatagcttataaaaac 49938755  T
Q  406 aacttataacttatac 421  Q
    |||||||||| |||||    
T  49938754 aacttataacatatac 49938739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 421
Target Start/End: Complemental strand, 2777997 - 2777884
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||| ||||| | ||||||||||||| |||| || |||  ||||||||||  |||||||||||| ||||||||| ||||||||  | ||||| ||||||    
T  2777997 tgagactgtttaggagaacttatgaaaccaactta-tgacgtattcataagccgttttcagcttattttcataagttctccaagttaacttattaaaaca 2777899  T
Q  407 acttataacttatac 421  Q
     |||||| |||||||    
T  2777898 gcttatagcttatac 2777884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 6231732 - 6231790
Alignment:
Q  258 acctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtt 316  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||| || ||||||||||    
T  6231732 acctgtttgaattggtttatttgaggttatctactagcataaacatttgtgagattgtt 6231790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 405
Target Start/End: Complemental strand, 19390030 - 19389909
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttc-agcttaatttcataagc 382  Q
    ||||||||||||||||  | || ||| | ||||||| ||||| |||||||| ||| || ||| || |||||||||||||||  |||||| ||||| ||||    
T  19390030 ttatctactaacataagtagttgtgacactgtttgggagaacgtatgaaaaaaactta-tgatatgttcataagttgttttttagcttattttcacaagc 19389932  T
Q  383 tctccaagacagcttatcaaaac 405  Q
    ||||||||| ||||||| |||||    
T  19389931 tctccaagatagcttatgaaaac 19389909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 419
Target Start/End: Original strand, 37842334 - 37842431
Alignment:
Q  321 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 419  Q
    |||||||||||||||| | || ||| || ||||||||  |||||||||||| ||| ||||| ||| ||||| ||||||| ||||||||||||| |||||    
T  37842334 agaacttatgaaaacatc-taatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttat 37842431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 421
Target Start/End: Original strand, 51695459 - 51695573
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||| |||||||||||||||||  ||||||| ||    | | |||||||| | ||||||||||| ||||||||  ||||||||| ||||||| ||||||    
T  51695459 tgagactgtttggaagaacttatataaacaacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaaca 51695558  T
Q  407 acttataacttatac 421  Q
     || |||||||||||    
T  51695559 tctgataacttatac 51695573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 420
Target Start/End: Original strand, 7218027 - 7218151
Alignment:
Q  295 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacag 394  Q
    ||||||||||| |||||||||||||  || ||| ||||||| || || ||| |  |||| ||| |||||||| |||| ||||||||| |||||| || ||    
T  7218027 cataaacacttctgagattgtttgggggagcttgtgaaaacgactta-tgacacgttcacaagctgttttcaacttattttcataagttctccaggatag 7218125  T
Q  395 cttatcaaaacaacttataacttata 420  Q
     |||| ||||||||||||| ||||||    
T  7218126 gttatgaaaacaacttatagcttata 7218151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 413
Target Start/End: Original strand, 26779934 - 26779995
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||||||| |||| ||||||||| ||| ||||| ||||||| |||||||||||||    
T  26779934 cataagttgttttcaacttattttcataagttcttcaagatagcttatgaaaacaacttata 26779995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 413
Target Start/End: Complemental strand, 27140539 - 27140478
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||||||| || ||||||||||||| || ||||||| |||||| ||||||    
T  27140539 cataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 421
Target Start/End: Complemental strand, 45975755 - 45975682
Alignment:
Q  348 tattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||| ||||||||||||| ||||||||  ||||||||| ||||||| |||||| ||| || |||||||    
T  45975755 tattcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagcttgtagcttatac 45975682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 46252689 - 46252738
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttat 399  Q
    |||||||||||||||||| ||| ||||||||||||||||||| |||||||    
T  46252689 ttcataagttgttttcaggttattttcataagctctccaagatagcttat 46252738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 12564509 - 12564569
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||||||||||| || |||||| ||||||||| ||||||| |||||||| ||||    
T  12564509 ataagttgttttcagcttatttccataagttctccaagatagcttatgaaaacaacctata 12564569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 417
Target Start/End: Original strand, 5887001 - 5887068
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 417  Q
    |||||||||||||||||||||| |||| |||| |||||||||  ||||||  ||||| ||||||||||    
T  5887001 ttcataagttgttttcagcttattttcgtaagttctccaagatggcttatagaaacagcttataactt 5887068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 35590899 - 35590970
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||| |||||||||||||||| || ||||||||||||| || ||||||| ||| | ||||||| |||||||    
T  35590899 ttcatcagttgttttcagcttatttccataagctctccatgatagcttatgaaatcgacttatagcttatac 35590970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 413
Target Start/End: Original strand, 3233979 - 3234085
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||| |||| || |||||||||||||||||| ||    | | |||||||||| |||||  |||| ||||||||| ||||||| | ||||||| ||||||    
T  3233979 tgagactgttagggagaacttatgaaaacaacttataacagttttcataagtttttttctacttattttcataagttctccaatatagcttataaaaaca 3234078  T
Q  407 acttata 413  Q
    |||||||    
T  3234079 acttata 3234085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 7472365 - 7472311
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||    
T  7472365 tgttttcagcttattttcataagctctccaagatagcttatggaaacagcttata 7472311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 420
Target Start/End: Original strand, 14629973 - 14630043
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||||||||| || |||||  ||||||||| ||||||| |||| | |||||| ||||||    
T  14629973 ttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagcttata 14630043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 388
Target Start/End: Complemental strand, 15361103 - 15361065
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctcca 388  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  15361103 ttcataagttgttttcagcttattttcataagctctcca 15361065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 24313610 - 24313672
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    |||||||||||||||||| || |||||||| |||||||||||  ||||| || ||||||||||    
T  24313610 atttgagtttatctactagcacaaacacttgtgagattgtttaaaagaaattgtgaaaacaac 24313672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 421
Target Start/End: Complemental strand, 43332538 - 43332476
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||||||||| ||| ||||||||| ||||| ||||||| |||||| |||| |||||||||    
T  43332538 tgttttcagcttattttaataagctcttcaagatagcttatgaaaacagcttacaacttatac 43332476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 4700079 - 4700144
Alignment:
Q  356 agttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||||||| |||||||||||||||| || || |||| ||||||  ||||| |||||||    
T  4700079 agttgttttcagcttattttcataagctctccaggatagtttataaaaacagtttatagcttatac 4700144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 5592694 - 5592762
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagac-agcttatcaaaacaacttataacttata 420  Q
    |||||||||||| ||||||| |||||||||||||  ||||| ||||||| ||||||||||||| ||||||    
T  5592694 cataagttgtttccagcttattttcataagctct-taagactagcttatgaaaacaacttatagcttata 5592762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 420
Target Start/End: Original strand, 37241736 - 37241899
Alignment:
Q  257 aacctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatg-aaaacaacgtactgaaatattcata 355  Q
    |||||||||| ||||  | |||| || |||||||||  ||||| |||||  |||||||||| | ||| | |||| |||||||| || ||| |||||||||    
T  37241736 aacctgtttggattgacttatttaagcttatctactg-cataagcacttgcgagattgtttaggagagcatatgcaaaacaactta-tgatatattcata 37241833  T
Q  356 agttgttttc-agcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||| ||||| |||||| |||||||||||||| | || | ||||| |||||||||| || ||||||    
T  37241834 agtttttttccagcttattttcataagctctctaggatatcttatgaaaacaacttctagcttata 37241899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 391
Target Start/End: Original strand, 4768762 - 4768877
Alignment:
Q  275 catttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatt 374  Q
    |||||||||||||| |||  ||||||||||| |||||  |||||| | |||||| ||||||| | ||| || || | ||||| |||||||||||||| ||    
T  4768762 catttgagtttatcaactggcataaacacttgtgagacagtttgggaaaacttacgaaaacagcttac-gacatgtccataacttgttttcagcttattt 4768860  T
Q  375 tcataagctctccaaga 391  Q
     |||||  |||||||||    
T  4768861 ccataaattctccaaga 4768877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 412
Target Start/End: Original strand, 12593462 - 12593522
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||||||||||||| || ||| ||||||| |||||||| ||||||| |||||| |||||    
T  12593462 cataagttgttttcaggtttattccataagcgctccaagatagcttatgaaaacagcttat 12593522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 412
Target Start/End: Original strand, 47598430 - 47598490
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||||||||||||||||  |  ||||||||||||| || ||||||| ||||||||||||    
T  47598430 cataagttgttttcagcttgttgccataagctctccaggatagcttatgaaaacaacttat 47598490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 219558 - 219621
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| ||||||||||| | || |||||||||| || ||||||||||  ||||||||||||    
T  219558 ttcataagctgttttcagctcatttccataagctcttcaggacagcttatgtaaacaacttata 219621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 1510317 - 1510388
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||| | |||||| |||| |||| |||| ||||||| | ||||||| ||||||||||||||| |||||    
T  1510317 ttcataagcttttttcaacttattttcgtaagttctccaatagagcttataaaaacaacttataacctatac 1510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 417
Target Start/End: Complemental strand, 4548780 - 4548717
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 417  Q
    ||||||||||| |||||| ||||  ||||||||||||| ||||||| |||||| ||||| ||||    
T  4548780 taagttgtttttagcttattttctgaagctctccaagatagcttatgaaaacagcttatgactt 4548717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 10744364 - 10744301
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| |||||||| |||| ||| ||||| |||| |||||||||||| |||||| ||||||    
T  10744364 ttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaacagcttata 10744301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 412
Target Start/End: Complemental strand, 17269365 - 17269251
Alignment:
Q  297 taaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagct 396  Q
    ||||||||| ||||||||||||| ||  |||||||||| | | || ||| || ||||| ||||||||| | |||| |  | ||||||||||| || ||||    
T  17269365 taaacacttgtgagattgtttggtagtgcttatgaaaatacctta-tgacatgttcatgagttgtttttaacttattaccgtaagctctccaggatagct 17269267  T
Q  397 tatcaaaacaacttat 412  Q
    ||| ||||||||||||    
T  17269266 tatgaaaacaacttat 17269251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 17420355 - 17420277
Alignment:
Q  259 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||||| |||||||| |||||||||| | || || ||||||||||| | ||| ||||| ||||| ||||||||||||||    
T  17420355 cctgtttcaattggtttatttgagttttt-tattagcataaacacttgttagactgttttgaagagcttatgaaaacaac 17420277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 18327067 - 18327142
Alignment:
Q  263 tttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    |||| ||||| | ||||||| |||||||||  ||||| ||||| ||| | | ||||||||||||||||||||||||    
T  18327067 tttggattggcttatttgagcttatctactgtcataagcacttttgacactatttggaagaacttatgaaaacaac 18327142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 24915058 - 24915121
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| | |||||| |||| ||||| ||| ||||||||||||||||| |||||| ||||||    
T  24915058 ttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttata 24915121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 27820344 - 27820415
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||| | ||||||||||| ||||||||  ||||||||| ||||||| |||||| | |||| |||||||    
T  27820344 ttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttatac 27820415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 28077069 - 28077132
Alignment:
Q  343 tgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    |||||| |||||||||||||||||||||| ||  |||||||||| || | ||||||| ||||||    
T  28077069 tgaaatgttcataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaaaca 28077132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 371
Target Start/End: Original strand, 40413956 - 40414050
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagctta 371  Q
    ||||||||||||| ||  |||| ||||||| | ||||||||||| |||||||| |||| |||| |  |||||| | ||||||||||||||| ||||    
T  40413956 atttgagtttatcaaccgacatcaacacttgtaagattgtttgggagaacttacgaaagcaac-tgatgaaatgtccataagttgttttcaactta 40414050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 42757130 - 42757204
Alignment:
Q  295 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagctt 370  Q
    ||||| ||||| ||| | |||||||||||||||| ||||||||| || | | ||||||||||| ||||||||||||    
T  42757130 cataaccacttgtgacactgtttggaagaacttacgaaaacaactta-ttacatattcataagctgttttcagctt 42757204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 51688767 - 51688705
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||| ||||| ||||||||||||||||||||| |||||| || ||||||  |||||||||||||    
T  51688767 ttcagaagtttttttcagcttaatttcataag-tctccacgatagcttacgaaaacaacttata 51688705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 409
Target Start/End: Complemental strand, 3924713 - 3924628
Alignment:
Q  323 aacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaact 409  Q
    |||||||||||||||  || |||||| || ||||||||||||| ||||| || ||||| |||| || || ||||||| |||||||||    
T  3924713 aacttatgaaaacaattta-tgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaacaact 3924628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 4757474 - 4757412
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||||| ||||||| | |||||||||||| |||||   ||||| ||||||||||||||||||    
T  4757474 atttgagcttatctattgacataaacacttgtgagaccatttggcagaacttatgaaaacaac 4757412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 420
Target Start/End: Original strand, 5421955 - 5421997
Alignment:
Q  378 taagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||    
T  5421955 taagctctctaagatagcttatcaaaacaacttatagcttata 5421997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 8810118 - 8810080
Alignment:
Q  296 ataaacacttatgagattgtttggaagaacttatgaaaa 334  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  8810118 ataatcacttctgagattgtttggaagaacttatgaaaa 8810080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 15581382 - 15581328
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||||||| |||||| ||||| ||||||||||||||||| || ||| |||||||    
T  15581382 ttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaac 15581328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 28348783 - 28348729
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    |||||||||| ||||||||||| |||||||||||| ||||  ||| |||||||||    
T  28348783 ttatctactagcataaacacttgtgagattgtttgaaagatattacgaaaacaac 28348729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 421
Target Start/End: Complemental strand, 29793836 - 29793774
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||| |||| |||||||||||||| |||| ||||||| ||  ||||||||| |||||||    
T  29793836 tgttttcaacttagtttcataagctctcgaagatagcttatgaactcaacttatagcttatac 29793774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 35017637 - 35017583
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    |||||||| |||||| |||| || ||||||||||||| |||||||||| ||||||    
T  35017637 cataagttattttcaacttatttccataagctctccaggacagcttatgaaaaca 35017583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 418
Target Start/End: Complemental strand, 35179200 - 35179134
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    |||||| ||||||||||||| ||||||||| ||||||  | | ||||| |||||| |||||||||||    
T  35179200 cataagctgttttcagcttattttcataagttctccataataacttatgaaaacagcttataactta 35179134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 385
Target Start/End: Original strand, 38170647 - 38170732
Alignment:
Q  299 aacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctct 385  Q
    ||||||| ||||| || |||| ||| |||||||||||| | || ||| || |||||||||||||||||||||  |||| ||||||||    
T  38170647 aacacttgtgagactgcttgggagagcttatgaaaacagctta-tgacatgttcataagttgttttcagcttgttttcctaagctct 38170732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 4033932 - 4034009
Alignment:
Q  257 aacctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 334  Q
    |||||||||| ||||  ||||||||  || ||||||  ||||||||||| ||||||||||||  ||| ||||||||||    
T  4033932 aacctgtttgcattgactcatttgaacttgtctactggcataaacacttgtgagattgtttgagagagcttatgaaaa 4034009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 8016320 - 8016279
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaaga 391  Q
    ||||||| |||||||||||||| |||| ||||||||||||||    
T  8016320 ttcataacttgttttcagcttattttcctaagctctccaaga 8016279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 417
Target Start/End: Complemental strand, 16322910 - 16322845
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 417  Q
    ||||||||||||| |||||| || |||||||||| ||| | ||| ||| |||||| ||||||||||    
T  16322910 cataagttgtttttagcttatttccataagctcttcaaaatagcctatgaaaacagcttataactt 16322845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 417
Target Start/End: Original strand, 27963379 - 27963444
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 417  Q
    ||||||||||||| |||||| ||  ||||||||||||  | ||||||| ||||||||||| |||||    
T  27963379 cataagttgtttttagcttatttatataagctctccataatagcttatgaaaacaacttagaactt 27963444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 28482237 - 28482310
Alignment:
Q  347 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||  | |||| |||||| |||| |||||||||||||| | ||||| |||||| |||||| ||||||    
T  28482237 atattcataaactatttttagcttattttcgtaagctctccaagataacttataaaaacagcttatagcttata 28482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 383
Target Start/End: Original strand, 33723298 - 33723422
Alignment:
Q  258 acctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataag 357  Q
    ||||||||| ||||  | ||||||  |||||||||| ||||||||||| ||||| || |||| | |||||||| ||||| | |  ||| || ||||| ||    
T  33723298 acctgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagc-tcatgacatgttcatgag 33723396  T
Q  358 ttgttttcagcttaatttcataagct 383  Q
     ||||||||||||| || ||||||||    
T  33723397 atgttttcagcttatttccataagct 33723422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 36070332 - 36070255
Alignment:
Q  261 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    |||||| ||||||| ||||||  |||||| ||  ||||| ||||| ||||| ||||| | ||||||||||||||||||    
T  36070332 tgtttggattggtttatttgatattatcttctggcataagcacttgtgagactgtttaggagaacttatgaaaacaac 36070255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 38116089 - 38116146
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 411  Q
    |||||||||| ||||||| ||||||||| ||||||||| | ||||  |||||||||||    
T  38116089 taagttgtttccagcttactttcataagttctccaagataacttaagaaaacaactta 38116146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 371
Target Start/End: Complemental strand, 38578638 - 38578570
Alignment:
Q  302 acttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagctta 371  Q
    |||| ||||| ||||||||  |||||||||||||||| || | | |||||||||||||||||| ||||||    
T  38578638 acttgtgagactgtttggactaacttatgaaaacaactta-taacatattcataagttgttttgagctta 38578570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 413
Target Start/End: Original strand, 39347976 - 39348037
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||||||| || |||||||| | || || || |||| |||||||||||||    
T  39347976 cataagttgttttcagcttatttccataagctttgcaggatagtttatgaaaacaacttata 39348037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 388
Target Start/End: Complemental strand, 47877171 - 47877134
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctcca 388  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  47877171 tcataagttgttttcagcttattttcataagctttcca 47877134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 4622154 - 4622086
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||| |||||| |||||| ||||| ||||||||||||| ||| |||  ||||| |||||| ||||||    
T  4622154 cataagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttata 4622086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 12564883 - 12564951
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||| ||||||||||||| || | ||||| ||  |||| ||||||| ||||||||||||| ||||||    
T  12564883 cataagctgttttcagcttatttccgtaagcactaaaagatagcttatgaaaacaacttatagcttata 12564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 27887127 - 27887195
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||| ||||||| |||||| ||| ||| |||||||| || || |||| ||||||||||||| ||||||    
T  27887127 cataaattgtttttagcttatttttatatgctctccatgatagtttatgaaaacaacttatagcttata 27887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 30371209 - 30371141
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||||||| ||  ||| ||||||||| |   ||||| ||||||||||||| ||||||    
T  30371209 cataagttgttttcagcttatttcaatacgctctccaaaatgtcttatgaaaacaacttatagcttata 30371141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 413
Target Start/End: Complemental strand, 28615470 - 28615334
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttg-ttttcagcttaatt 374  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| | || ||| || ||||||||||| ||||  ||||| ||    
T  28615470 atttaagtttatctactagcataaacacttgtgagattgtttgg-agaacttatgaaaacagc-taatgacattttcataagttgttttttggcttattt 28615373  T
Q  375 tcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||| ||  | ||||||| |||||||||||||    
T  28615372 tcataagctcttcattatagcttatgaaaacaacttata 28615334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 2996691 - 2996566
Alignment:
Q  294 acataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagaca 393  Q
    |||||| ||||| ||||| ||||||  ||| |||||||||||||| || ||| || | |||||| | |||||| |||| ||||||| ||||||||||| |    
T  2996691 acataagcacttttgagactgtttgagagagcttatgaaaacaactta-tgacatgtccataagcttttttcaacttattttcatacgctctccaagata 2996593  T
Q  394 gcttatcaaaacaacttataacttata 420  Q
    |||||| ||||||||||||||||||||    
T  2996592 gcttatgaaaacaacttataacttata 2996566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 417
Target Start/End: Original strand, 52315161 - 52315271
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||||||||||||||||||||| |||||||| ||    | ||||||||||||| |||||||||| ||||||||| | ||||| | |||||||  |||||    
T  52315161 tgagattgtttggaagaacttatcaaaacaacttatcacattattcataagttgctttcagcttattttcataagttttccaaaatagcttatggaaaca 52315260  T
Q  407 acttataactt 417  Q
    |||||||||||    
T  52315261 acttataactt 52315271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 421
Target Start/End: Complemental strand, 17884131 - 17884060
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||||||||||| | ||||||||||||||||| | ||||||| ||||||||| |||||||||||    
T  17884131 ttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatac 17884060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 420
Target Start/End: Original strand, 18628487 - 18628620
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| ||||||||| |||||||||||| ||||| ||||||| ||| |||||||||||||| || ||          ||||||||||||||||| ||     
T  18628487 atttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaactta-tg----------aagttgttttcagcttatttc 18628575  T
Q  376 cataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||| | ||||| ||||||  ||||||||||||    
T  18628576 cataagctctccaagataacttatgaaaacagtttataacttata 18628620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 410
Target Start/End: Original strand, 4798511 - 4798633
Alignment:
Q  287 tctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctc 386  Q
    |||| ||||| |||||||| ||||| |||| |||||| |||||| ||||  | | |||| || | |||||| |||||| |||||| || |||||||||||    
T  4798511 tctattaacaaaaacacttgtgagactgttaggaagagcttatggaaacggctt-ctgacatgtacataagctgttttgagcttatttgcataagctctc 4798609  T
Q  387 caagacagcttatcaaaacaactt 410  Q
    ||||| ||||||| ||||||||||    
T  4798610 caagatagcttatgaaaacaactt 4798633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 420
Target Start/End: Original strand, 16494816 - 16494882
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||||| |||| ||| | ||||||||||||| ||||||| ||||||||||||| ||||||    
T  16494816 taagttgttttcaacttagttttacaagctctccaagatagcttatgaaaacaacttatagcttata 16494882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 413
Target Start/End: Original strand, 21731573 - 21731726
Alignment:
Q  259 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagt 358  Q
    |||||||| ||||||| |||||||  |||||||| ||||||    || ||||||||||||| |||||||||||||||| | ||    ||| |||||||      
T  21731573 cctgtttggattggtttatttgagcatatctactgacataagtt-ttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaac 21731671  T
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    | |||||| |||| ||||||||  ||||||| | ||||||| |||||||||||||    
T  21731672 ttttttcaacttactttcataaattctccaatatagcttataaaaacaacttata 21731726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 416
Target Start/End: Original strand, 42641573 - 42641714
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgtttt-cagctta-at 373  Q
    ||||||| |||||||||  | | ||||||| ||| | |||||  ||||||||||||||||| | || ||| || |||| ||| |||||| ||||||| ||    
T  42641573 atttgagcttatctactggcgtgaacacttgtgatactgttttcaagaacttatgaaaacacctta-tgacatgttcacaagctgttttgcagcttatat 42641671  T
Q  374 ttcataagctctccaagacagcttatcaaaacaacttataact 416  Q
    ||||||||||| |||| | ||||||| ||||||||||||||||    
T  42641672 ttcataagctcaccaaaatagcttatgaaaacaacttataact 42641714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 331
Target Start/End: Original strand, 51555705 - 51555759
Alignment:
Q  277 tttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 331  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||| |||||||    
T  51555705 tttgagtttatctactcacataagcacttatgagattgtttagaagagcttatga 51555759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 53673667 - 53673721
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||| ||||||    
T  53673667 cataagttgttttcagcttatttacataagctctccaagatagcttatgaaaaca 53673721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 420
Target Start/End: Complemental strand, 42866220 - 42866061
Alignment:
Q  260 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagtt 359  Q
    ||||||| ||||| |  ||||||||||| ||||  ||||||||| | ||||| | ||||| |||||||||| |||||   || ||| || | |||||| |    
T  42866220 ctgtttggattggcttgtttgagtttatttactggcataaacacctttgagactctttgggagaacttatgtaaacattcta-tgatatgtccataagat 42866122  T
Q  360 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    | ||| |||||| || ||||||||||| | || ||||||| ||||||||||||| ||||||    
T  42866121 gcttttagcttacttccataagctctcaaggatagcttatgaaaacaacttatagcttata 42866061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 7694017 - 7694088
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||||||||||||| || ||||| ||||||| || | ||||| |||||| |||||| |||||||    
T  7694017 ttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttatac 7694088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 17822872 - 17822935
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| | |||| |||||| ||||||||| ||||||||| ||||||| |||||||||||||    
T  17822872 ttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttata 17822935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 385
Target Start/End: Original strand, 32831438 - 32831559
Alignment:
Q  262 gtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgt 361  Q
    ||||| ||||| ||||||||| ||||||||| |||||| ||||| ||| |   ||||| |||||  ||||||||||| || | | ||||||||||| | |    
T  32831438 gtttggattggctcatttgagcttatctactgacataagcacttttgataccttttgggagaacagatgaaaacaactta-taacatattcataagatat 32831536  T
Q  362 tttcagcttaatttcataagctct 385  Q
    ||||||||| ||||||||||||||    
T  32831537 tttcagctt-atttcataagctct 32831559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 420
Target Start/End: Original strand, 36722687 - 36722746
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||| |||||| ||||||||||||| || || | ||||||||||||||||||||||||||    
T  36722687 ttttaagcttattttcataagctcttcaggataacttatcaaaacaacttataacttata 36722746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 421
Target Start/End: Complemental strand, 49202708 - 49202637
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||||||||||||| |||| |||||| || | ||||||| ||||||  ||||||||||||| |||||||    
T  49202708 ttcataagttgttttcaacttattttcattagttatccaagatagcttacgaaaacaacttatagcttatac 49202637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 420
Target Start/End: Complemental strand, 10192342 - 10192277
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||||| |||| ||||||| |||||||| || ||||| | ||||||||||||||||||||    
T  10192342 taagttgttttcaacttattttcata-gctctccaggatagcttttgaaaacaacttataacttata 10192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 11158373 - 11158431
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 417  Q
    ||||||||||||| || || |||||||| |||| ||||||| |||||||||||||||||    
T  11158373 tgttttcagcttatttccacaagctctctaagatagcttatgaaaacaacttataactt 11158431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 29263433 - 29263371
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||||||||||||||||||| || || ||||||| || || ||||||| ||||||||||||    
T  29263433 ttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaacaacttat 29263371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 386
Target Start/End: Original strand, 33534103 - 33534212
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| ||||||| | ||||||  |||| ||||| | ||||  ||| |||||||||||||  |  ||| |||| |||||||||||||||||||| |||    
T  33534103 atttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattg-tgacatatccataagttgttttcagcttatttt 33534201  T
Q  376 cataagctctc 386  Q
    |||||||||||    
T  33534202 cataagctctc 33534212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 40532601 - 40532655
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 404  Q
    ||||||||||||||||| |||| |||| || ||||||||||||||||||| ||||    
T  40532601 ttcataagttgttttcatcttattttcgtaggctctccaagacagcttatgaaaa 40532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 47146025 - 47145971
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 404  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||| |||| ||||    
T  47146025 ttcataagttgttttcaccttattttcataagctcttcaagacagtttatgaaaa 47145971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 1017164 - 1017111
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttat 329  Q
    ||||||| | ||||||| |||||||||||| ||||| |||||||||||||||||    
T  1017164 atttgagctaatctactgacataaacacttgtgagactgtttggaagaacttat 1017111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 386
Target Start/End: Complemental strand, 1137827 - 1137739
Alignment:
Q  297 taaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctc 386  Q
    ||||||||| ||| | ||||| | |||||||||||||||| | || ||| || |||||||||||||||||| ||| || |||||||||||    
T  1137827 taaacacttgtgacactgtttaggagaacttatgaaaacatctta-tgacatgttcataagttgttttcagtttatttccataagctctc 1137739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 420
Target Start/End: Complemental strand, 23819194 - 23819082
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||| |||||||||||  ||| ||||||| | || ||| || | ||||||||||||||| |||| ||  ||||||||| ||||| ||||||| ||||||    
T  23819194 tgagactgtttggaagagtttaagaaaacagctta-tgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaaca 23819096  T
Q  407 acttataacttata 420  Q
      ||||||||||||    
T  23819095 tgttataacttata 23819082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 30668384 - 30668433
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 410  Q
    |||||||||||||||||||| || ||||||| ||||||| ||||||||||    
T  30668384 ttttcagcttaatttcataaactatccaagatagcttataaaaacaactt 30668433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 369
Target Start/End: Original strand, 37575870 - 37575962
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagct 369  Q
    |||||||||||||| ||| ||||||| ||  ||| ||||||||  |||||||||||||| ||| || | | ||| |||||||||||||||||||    
T  37575870 atttgagtttatctgctagcataaactctcgtgacattgtttgagagaacttatgaaaataactta-taacatactcataagttgttttcagct 37575962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 360 - 413
Target Start/End: Complemental strand, 47800676 - 47800623
Alignment:
Q  360 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||| ||||||||||||| ||||| ||||||| |||||| ||||||    
T  47800676 gttttcagcttattttcataagctcttcaagatagcttatgaaaacagcttata 47800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 55084488 - 55084549
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 411  Q
    |||||||| || |||||||||| |||||||||||||| |||| |||| || |||||||||||    
T  55084488 ttcataagctggtttcagcttattttcataagctctctaagatagctcatgaaaacaactta 55084549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 414
Target Start/End: Complemental strand, 1404472 - 1404416
Alignment:
Q  358 ttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 414  Q
    |||||||||||||| |||||||||||||||| || || |||| ||||| ||||||||    
T  1404472 ttgttttcagcttactttcataagctctccatgatagtttatgaaaaccacttataa 1404416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 27970095 - 27970051
Alignment:
Q  376 cataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  27970095 cataagctctccatgacagcttatgaaaacaagttataacttata 27970051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 49219200 - 49219132
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||||||| || ||||| ||||  |||| || |||| ||||||||||||| ||||||    
T  49219200 cataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttata 49219132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 56480388 - 56480340
Alignment:
Q  373 tttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||||||||||||||| || |||| |||||| ||||||||||||||    
T  56480388 tttcataagctctccaagatagtttatgaaaacagcttataacttatac 56480340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 419
Target Start/End: Complemental strand, 11802595 - 11802528
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 419  Q
    |||||| ||||||||||||| | ||||||||||||||  | ||||||| |||||||||| || |||||    
T  11802595 cataagctgttttcagcttattctcataagctctccataatagcttatgaaaacaacttgtagcttat 11802528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 336
Target Start/End: Complemental strand, 22471401 - 22471350
Alignment:
Q  285 tatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    |||||||| |||||| ||||| ||||| ||||||| ||||||||||||||||    
T  22471401 tatctactgacataagcacttgtgagactgtttgggagaacttatgaaaaca 22471350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 335
Target Start/End: Original strand, 25487491 - 25487550
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaac 335  Q
    ||||||||||||||| || ||||| ||||| | ||||||||||||||| |||||| ||||    
T  25487491 atttgagtttatctattagcataagcacttgtaagattgtttggaagagcttatgcaaac 25487550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 8328040 - 8328114
Alignment:
Q  263 tttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaa 337  Q
    ||||||||| |  ||||||| ||||||| |  ||||| ||||||||||| ||||||||| | |||||||||||||    
T  8328040 tttgaattgatgtatttgagcttatctattggcataagcacttatgagactgtttggaatagcttatgaaaacaa 8328114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 17975380 - 17975438
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    ||||||||||| |||||| || || ||||||||||||| ||||||| |||||| |||||    
T  17975380 taagttgtttttagcttatttccagaagctctccaagatagcttataaaaacagcttat 17975438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 325
Target Start/End: Original strand, 22772417 - 22772459
Alignment:
Q  283 tttatctactaacataaacacttatgagattgtttggaagaac 325  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||    
T  22772417 tttatctactagcataaacacttttgagattgtttgggagaac 22772459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 24087472 - 24087410
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||||||||||||||||||||||||||||   | | ||||| | |||||||||| |||||||    
T  24087472 atttgagtttatctactaacataaacacttgccaaactgttttggagaacttatggaaacaac 24087410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 24091599 - 24091537
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||||||||||||||||||||||||||||   | | ||||| | |||||||||| |||||||    
T  24091599 atttgagtttatctactaacataaacacttgccaaactgttttggagaacttatggaaacaac 24091537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 25332873 - 25332807
Alignment:
Q  315 tttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataag 381  Q
    ||||| |||||||  ||||||||| ||  | | |||||||||||||||||||||||| |||||||||    
T  25332873 tttgggagaacttgcgaaaacaacttatggcattattcataagttgttttcagcttattttcataag 25332807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 27721830 - 27721717
Alignment:
Q  299 aacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagctta 398  Q
    ||||||| |||||||||||   ||| ||||| ||||| || || ||| |||| |||||| ||||||||||||| ||||  |||||||||| || | ||||    
T  27721830 aacacttgtgagattgtttaagagagcttataaaaactactta-tgacatatccataagctgttttcagcttattttcgcaagctctccaggataactta 27721732  T
Q  399 tcaaaacaacttata 413  Q
    | |||||| ||||||    
T  27721731 tgaaaacagcttata 27721717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 420
Target Start/End: Original strand, 30207582 - 30207648
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||| ||||||||||||| || ||||| ||||| |||  ||||||| ||||||||||||| ||||||    
T  30207582 taagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttata 30207648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 39178209 - 39178259
Alignment:
Q  285 tatctactaacataaacacttatgagattgtttggaagaacttatgaaaac 335  Q
    |||||||| |||||||||||| ||| | ||||||| |||||||||||||||    
T  39178209 tatctactgacataaacacttttgacactgtttgggagaacttatgaaaac 39178259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 420
Target Start/End: Complemental strand, 43824346 - 43824276
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||||||||| || |||||||| |||| || | ||||  |||| | |||||||||||||    
T  43824346 ttcataagttgttttcagcttatttccataagctttccaggataacttacgaaaaaagcttataacttata 43824276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 411
Target Start/End: Original strand, 46019548 - 46019697
Alignment:
Q  261 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttg 360  Q
    ||||||||||| || ||||||| |||| |||||  ||||| |||| ||||||||| || ||||  |||| || | ||| || ||| || || ||||||||    
T  46019548 tgtttgaattgatttatttgagcttatgtactagtataaaaacttgtgagattgtctgaaagagtttataaacagaactta-tgacatgttgataagttg 46019646  T
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 411  Q
    |||||| ||||  |||||||||||| |  || | ||||| |||||||||||    
T  46019647 ttttcaacttatattcataagctcttcgggataacttatgaaaacaactta 46019697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 46110291 - 46110230
Alignment:
Q  324 acttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctc 386  Q
    ||||||||||||||| || ||| ||| ||||||||||||||||||||| ||  ||||||||||    
T  46110291 acttatgaaaacaactta-tgatatactcataagttgttttcagcttatttctataagctctc 46110230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 417
Target Start/End: Original strand, 46415725 - 46415866
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgttt-ggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatt 374  Q
    ||||||||| ||| ||| |||||   |||||||||| ||||| || |||  ||||| ||||||| || ||| || | |||||||||||||||||| | ||    
T  46415725 atttgagttcatccactgacataggaacttatgagactgttttgggagagtttatgcaaacaaccta-tgacatgtccataagttgttttcagctaattt 46415823  T
Q  375 tcataagctctccaagacagcttatcaaaacaacttataactt 417  Q
    |  ||||||||| | || ||||||| |||| ||||||||||||    
T  46415824 tactaagctctcgaggatagcttatgaaaagaacttataactt 46415866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 420
Target Start/End: Original strand, 50799986 - 50800106
Alignment:
Q  298 aaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagctt 397  Q
    |||||||| ||||||||||||| |||||| ||| ||||||| || ||| || |  ||||| |||||||||||| |||||  ||| |||||| || |||||    
T  50799986 aaacacttgtgagattgtttgggagaactaatgtaaacaactta-tgacatgtctataagctgttttcagctt-atttccaaagttctccatgatagctt 50800083  T
Q  398 atcaaaacaacttataacttata 420  Q
    |  |||||| |||||| ||||||    
T  50800084 aagaaaacagcttatagcttata 50800106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 53792631 - 53792593
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaaga 391  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  53792631 ataagttgttttcagcttattttcataaactctccaaga 53792593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 2592320 - 2592365
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttat 399  Q
    |||||||||||||||||| || |||||||||||||| | |||||||    
T  2592320 taagttgttttcagcttatttccataagctctccaaaatagcttat 2592365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 5131259 - 5131304
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagctt 397  Q
    |||||||||||||||||||| || ||||||||||||| || |||||    
T  5131259 cataagttgttttcagcttatttccataagctctccaggatagctt 5131304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 14011293 - 14011248
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttat 399  Q
    |||| ||||||||||||| || |||||||||||||||| |||||||    
T  14011293 taagctgttttcagcttatttccataagctctccaagatagcttat 14011248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 398
Target Start/End: Original strand, 30377433 - 30377470
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagctta 398  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  30377433 ttttcagcttattttcataagctctccaagatagctta 30377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 413
Target Start/End: Original strand, 34398694 - 34398755
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||| ||||| || ||||||||||||| ||  |||||| |||||| ||||||    
T  34398694 cataagttgttttcggcttacttccataagctctccatgatggcttatgaaaacagcttata 34398755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 35406016 - 35405947
Alignment:
Q  344 gaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||| |||||||| ||||||||||||| || ||||||||||||| || | ||| | |||||||| ||||    
T  35406016 gaaatgttcataagctgttttcagcttacttccataagctctccaggataacttttgaaaacaacctata 35405947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 420
Target Start/End: Original strand, 44638187 - 44638250
Alignment:
Q  358 ttgttttcagcttaatttcataagctctc--caagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||| ||||||||||||||  ||||| |||||||  |||||||||||| ||||||    
T  44638187 ttgttttcagctta-tttcataagctctctccaagatagcttatacaaacaacttatagcttata 44638250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 385
Target Start/End: Original strand, 51560207 - 51560331
Alignment:
Q  260 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagtt 359  Q
    |||||| ||||| || || |||| |||||||||  ||||| ||||||||||| | ||||| ||| |||||||||||| | || | | || ||||||| ||    
T  51560207 ctgtttcaattgctttatatgagcttatctactggcataagcacttatgagactctttgggagaccttatgaaaacacctta-tcacatgttcataactt 51560305  T
Q  360 gttttcagcttaatttcataagctct 385  Q
    ||||| |||||| | |||||| ||||    
T  51560306 gtttttagcttattctcataatctct 51560331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 3549479 - 3549547
Alignment:
Q  266 gaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 334  Q
    ||||||| | |||| |||||||||| |  ||||| ||||||||||| ||||||  ||||||||||||||    
T  3549479 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 3549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 8469009 - 8468941
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||| ||| |||||||||||||| |  | | ||||| ||||||||| ||| ||||||    
T  8469009 cataagttgttttcagattattttcataagctctctagaataacttatgaaaacaactaatagcttata 8468941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 24169326 - 24169270
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    |||||||| | |||||| |||| ||||||||||||||||||| ||||| | ||||||    
T  24169326 ttcataagattttttcaacttattttcataagctctccaagatagcttgtgaaaaca 24169270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 24718790 - 24718746
Alignment:
Q  287 tctactaacataaacacttatgagattgtttggaagaacttatga 331  Q
    |||||| |||||||||||||||||| |||||||  ||||||||||    
T  24718790 tctactgacataaacacttatgagactgtttggtcgaacttatga 24718746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 421
Target Start/End: Original strand, 28300278 - 28300377
Alignment:
Q  321 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||| ||||||||||| | || ||| || ||| ||||||||||||| |||| ||||||||||||| ||||| ||| ||| |||| |  ||||| ||||||    
T  28300278 agaatttatgaaaacagccta-tgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagtttatagcttata 28300376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 42641416 - 42641492
Alignment:
Q  260 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    ||||||||||||||| ||||| | ||| |||||  ||||| ||||| ||| | ||||||  ||||||||||||||||    
T  42641416 ctgtttgaattggtttatttgtgcttaactactgtcataatcacttttgaaactgtttgcgagaacttatgaaaaca 42641492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 413
Target Start/End: Complemental strand, 44797922 - 44797886
Alignment:
Q  377 ataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  44797922 ataagctctccaatacagcttataaaaacaacttata 44797886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 49803271 - 49803215
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||| || ||||||||||||| | || |||| ||||||||| ||||||||||||||    
T  49803271 ttcattagctgttttcagcttattgtcttaagttctccaagaaagcttatcaaaaca 49803215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 52259683 - 52259631
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||| |||| ||||||||||||||| ||| ||||||| |||||| ||||||    
T  52259683 ttttcaacttattttcataagctctcccagatagcttataaaaacagcttata 52259631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 407
Target Start/End: Complemental strand, 10031861 - 10031738
Alignment:
Q  283 tttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagc 382  Q
    |||||||||| |||||| ||||| ||||| |||||| |||| | ||||||| |||| ||| || |||| ||||||||||||||| |||| || | |||||    
T  10031861 tttatctactgacataagcacttgtgagactgtttgaaagagcctatgaaaccaacttac-gacatatccataagttgttttcatcttatttccttaagc 10031763  T
Q  383 tctccaagacagcttatcaaaacaa 407  Q
    ||||||||||||||||| |||||||    
T  10031762 tctccaagacagcttataaaaacaa 10031738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 421
Target Start/End: Original strand, 20368153 - 20368258
Alignment:
Q  315 tttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 414  Q
    ||||| |||||||||||||||||| || ||| || |||||||| |  ||||| |||| ||||||||| ||||||||| ||||||| ||||||||||||||    
T  20368153 tttgggagaacttatgaaaacaactta-tgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaacttataa 20368251  T
Q  415 cttatac 421  Q
    || ||||    
T  20368252 ctcatac 20368258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 417
Target Start/End: Original strand, 35070401 - 35070541
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| |||||||||||||||| ||||| || || ||||||| |||||  ||||||||| | ||  | || || |||||| |||||||| |||| |||    
T  35070401 atttgagcttatctactaacataagcacttgtgggactgtttgggagaacaaatgaaaacagcttaaggcaagat-cataagctgttttcaacttatttt 35070499  T
Q  376 cataagctctccaagacagcttatcaaaacaacttataactt 417  Q
    ||||||||||| || | ||||||  |||||| ||||||||||    
T  35070500 cataagctctcaaacatagcttacaaaaacagcttataactt 35070541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 421
Target Start/End: Original strand, 31812036 - 31812091
Alignment:
Q  366 agcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  31812036 agcttattttcataagctctccaagatagcttatgaaaacaacttatatcttatac 31812091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 420
Target Start/End: Complemental strand, 4006811 - 4006707
Alignment:
Q  315 tttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 414  Q
    ||||||||| ||| |||||||||| ||| || || | |||||||| ||||||||||| |||||||| |||||   || ||||||| |||||||||||||     
T  4006811 tttggaagagcttgtgaaaacaacttac-gatatgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatag 4006713  T
Q  415 cttata 420  Q
    ||||||    
T  4006712 cttata 4006707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 420
Target Start/End: Original strand, 34910374 - 34910486
Alignment:
Q  308 gagattgtttggaagaacttatgaaaacaacgtactgaaata-ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    |||||||||||||||||  |||||||||| | || ||| ||  ||||| |||||||||| ||||| ||||||||| ||||||| |||| |||| | ||||    
T  34910374 gagattgtttggaagaaactatgaaaacagctta-tgacattgttcatgagttgttttccgcttactttcataagttctccaaaacagattatgagaaca 34910472  T
Q  407 acttataacttata 420  Q
    ||||||| ||||||    
T  34910473 acttatagcttata 34910486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 2160946 - 2161014
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||||||| |||| || ||||| || ||||||||||||||  ||||||||||||| ||||||    
T  2160946 cataagttgttttcaacttatttccataatctttccaagacagcttaggaaaacaacttatatcttata 2161014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 27857500 - 27857432
Alignment:
Q  270 tggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||| ||||||||||||||||| ||||| |||||| ||| | ||||||| ||| ||||||||||||||    
T  27857500 tggtttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaac 27857432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 418
Target Start/End: Complemental strand, 31624184 - 31624085
Alignment:
Q  318 ggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 417  Q
    ||||||||||||||||||| | || ||| || |||||||| |||||||| |||| ||||||||  ||||||||| ||| ||| |||||| |||||| |||    
T  31624184 ggaagaacttatgaaaacagctta-tgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctt 31624086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 420
Target Start/End: Complemental strand, 6647450 - 6647380
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||| |||||||| |||| |||||||||||||| |||| ||||||| ||||||  ||||||| ||||    
T  6647450 ttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaacagattataacctata 6647380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 421
Target Start/End: Original strand, 9093572 - 9093634
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||||||||| |||| |||| |||| |||||||||||| |||||| |||||| |||||||    
T  9093572 tgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatac 9093634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 26559173 - 26559235
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||||||||| |||||  ||||| || || ||||| ||||||||||||||||||||||||||    
T  26559173 atttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaac 26559235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 31672445 - 31672491
Alignment:
Q  258 acctgtttgaattggttcatttgagtttatctactaacataaacact 304  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||    
T  31672445 acctatttgaattggtttatttgagtttatctactcacataaacact 31672491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 34430469 - 34430539
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||| | ||||||||||| ||||||||  ||||||||| ||||||| |||||| |||||||| |||||    
T  34430469 tcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataacatatac 34430539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 769254 - 769170
Alignment:
Q  296 ataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataag 381  Q
    |||||||||| ||||| |||||||| ||||||||||||||| | || ||| || |||||||| |||||||| |||| |||| ||||    
T  769254 ataaacacttgtgagactgtttggatgaacttatgaaaacatctta-tgacatgttcataagctgttttcaacttactttcttaag 769170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 4420706 - 4420645
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 411  Q
    |||||||| ||||||||||||| || |||||||||||||||| ||||||  |||| ||||||    
T  4420706 ttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaataactta 4420645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 420
Target Start/End: Original strand, 33787761 - 33787822
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||| || || |||||||||||||||| | ||||| |||||| |||||||||||||    
T  33787761 tgttttcagcctatttccataagctctccaagataacttatgaaaacagcttataacttata 33787822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 5564144 - 5564200
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataac 415  Q
    ||||||||||||| || ||||| |||| ||||||||||||| ||||||||| |||||    
T  5564144 tgttttcagcttatttgcataaactcttcaagacagcttatgaaaacaactgataac 5564200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 31421038 - 31420975
Alignment:
Q  319 gaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 383  Q
    ||||| |||||||||||||| || |   ||||||||||||||||||||||||| |||||||||||    
T  31421038 gaagagcttatgaaaacaactta-tcgcatattcataagttgttttcagcttattttcataagct 31420975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 34429639 - 34429703
Alignment:
Q  267 aattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 331  Q
    |||||||| ||||||| |||||||||| |||||||||||  || ||||||||||| | |||||||    
T  34429639 aattggtttatttgagcttatctactagcataaacacttgagatattgtttggaaaagcttatga 34429703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 421
Target Start/End: Complemental strand, 415367 - 415296
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||  |||||||||||| ||| |||||| ||||||  | ||||||| ||||||||||||| |||||||    
T  415367 ttcataatctgttttcagctttattccataagttctccactatagcttataaaaacaacttatagcttatac 415296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 30863363 - 30863269
Alignment:
Q  295 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaag 390  Q
    ||||||||||| | ||| | ||||| ||| |||||||||||||| || ||| || | |||||||||||||||||||| ||  ||||||||| ||||    
T  30863363 cataaacacttgttagactctttggtagagcttatgaaaacaactta-tgacatgtacataagttgttttcagcttacttctataagctcttcaag 30863269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 405
Target Start/End: Original strand, 835265 - 835311
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaac 405  Q
    ||||||||||||| ||||||||| ||||||||| ||||||| |||||    
T  835265 tgttttcagcttattttcataagttctccaagatagcttatgaaaac 835311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 388
Target Start/End: Original strand, 7945820 - 7945929
Alignment:
Q  278 ttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttca 377  Q
    ||||| ||||||||| |||||| ||||  ||| || |||||| |||| ||||||||||||| || ||  || || || ||||||||| |||||| || ||    
T  7945820 ttgagcttatctactgacataagcactcgtgacatggtttgggagaaattatgaaaacaactta-tggcatgtttattagttgttttaagcttatttcca 7945918  T
Q  378 taagctctcca 388  Q
    |||||||||||    
T  7945919 taagctctcca 7945929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 421
Target Start/End: Original strand, 29296304 - 29296371
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||| ||||||||||| ||||||||||| |  |||| ||||||  ||||||||||||| |||||||    
T  29296304 cataagttattttcagcttattttcataagctat--aagagagcttaagaaaacaacttataccttatac 29296371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 31774513 - 31774455
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 334  Q
    ||||||||||||||||   ||||| ||||||||||| ||||||||||| || |||||||    
T  31774513 atttgagtttatctaccggcataagcacttatgagactgtttggaagagctcatgaaaa 31774455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 420
Target Start/End: Original strand, 32386578 - 32386640
Alignment:
Q  358 ttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||| |||||||||||||||| || | || || |||||||| |||| ||||||    
T  32386578 ttgttttcagcttattttcataagctctccaggataactaatgaaaacaacgtataccttata 32386640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 412
Target Start/End: Complemental strand, 34403977 - 34403856
Alignment:
Q  290 actaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaa 389  Q
    |||| ||||||||||| | ||| ||||| | |||| ||| ||||||||| || ||| || |||||||| |||||||| |||| || ||||||||||  |     
T  34403977 actagcataaacacttgttagactgtttaggagaagttaagaaaacaactta-tgacatgttcataaggtgttttcaccttatttccataagctctttag 34403879  T
Q  390 gacagcttatcaaaacaacttat 412  Q
     ||||||||| |||||| |||||    
T  34403878 tacagcttatgaaaacatcttat 34403856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 418
Target Start/End: Original strand, 837234 - 837291
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    ||||||||||| ||||||||| ||||||||| |||| || ||||| ||||||| ||||    
T  837234 ttttcagcttattttcataagttctccaagatagctaatgaaaactacttatagctta 837291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 416
Target Start/End: Complemental strand, 1498035 - 1497978
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataact 416  Q
    |||||||| |||| ||||||||||||||||||| || |||| |||||  |||||||||    
T  1498035 tgttttcaccttattttcataagctctccaagatagtttatgaaaacttcttataact 1497978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 7351605 - 7351646
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgttt 317  Q
    ||||||||||||||||| |||||| ||||| |||||||||||    
T  7351605 atttgagtttatctactgacataagcacttgtgagattgttt 7351646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 385
Target Start/End: Complemental strand, 9027639 - 9027606
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctct 385  Q
    |||||||||||||||||||| |||||||||||||    
T  9027639 cataagttgttttcagcttattttcataagctct 9027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 421
Target Start/End: Complemental strand, 26694931 - 26694870
Alignment:
Q  360 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||| ||||||||| ||| ||||| || |||| ||||||| ||||||| |||||    
T  26694931 gttttcagcttattttcataagttcttcaagatagtttatgaaaacaatttataacatatac 26694870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 27909647 - 27909700
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaac 405  Q
    |||||||||||||||||||| || |||||||||||||  | ||||||| |||||    
T  27909647 cataagttgttttcagcttatttccataagctctccagtaaagcttataaaaac 27909700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 413
Target Start/End: Original strand, 32386115 - 32386176
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||||||| ||||||||||| |||| || | || || |||||| ||||||    
T  32386115 cataagttgttttcagcttactttcataagctttccaggataactaatgaaaacagcttata 32386176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 1401169 - 1401101
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||| ||||| ||||||||  | ||||||||||||| || ||||||| |||||| |||||| |||||||    
T  1401169 ataacttgttctcagcttatctccataagctctccatgatagcttatgaaaacagcttatagcttatac 1401101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 2205610 - 2205654
Alignment:
Q  363 ttcagcttaatttcataagctctccaagacagcttatcaaaacaa 407  Q
    ||||||||| || |||||||||||||||| ||||||| |||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaaacaa 2205654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 413
Target Start/End: Complemental strand, 2455351 - 2455259
Alignment:
Q  321 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||||| || |  | | || ||||||||||||||||||| ||||| ||  |||||||||  || ||| |||||| ||||||    
T  2455351 agaacttatgaaaacaacttattacattgtttataagttgttttcagcttattttcacaacttctccaagattgcatatgaaaacagcttata 2455259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 4325222 - 4325274
Alignment:
Q  259 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgaga 311  Q
    |||||||| ||||  | |||| ||||||||||||||||||||||||| |||||    
T  4325222 cctgtttggattgactaattttagtttatctactaacataaacacttgtgaga 4325274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 389
Target Start/End: Original strand, 7785754 - 7785790
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaa 389  Q
    ||||||||||||||||||| || ||||||||||||||    
T  7785754 ataagttgttttcagcttatttccataagctctccaa 7785790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 334
Target Start/End: Complemental strand, 41170763 - 41170688
Alignment:
Q  259 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 334  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||| ||||| | ||||||| ||||||||||||    
T  41170763 cctgtttggattggcttatttgagtttatctactaacataaacacttgtgagactatttggaataacttatgaaaa 41170688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 276 - 406
Target Start/End: Complemental strand, 8017570 - 8017441
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| ||||||| | |||||| ||||| || |||| ||||| |||||||||||||||| | || ||| || ||||||| |||||||| || || |||    
T  8017570 atttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaacagctta-tgatatgttcataatttgttttctgcgtatttt 8017472  T
Q  376 cataagctctccaagacagcttatcaaaaca 406  Q
    |||||| ||||||||| ||||||| ||||||    
T  8017471 cataagttctccaagatagcttatgaaaaca 8017441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 421
Target Start/End: Complemental strand, 40158867 - 40158710
Alignment:
Q  263 tttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgtt 362  Q
    |||| ||||| | |||||||  |||||||| ||||||  |||| ||||| || ||||  ||||||||||||||| | || ||| || || ||||||||||    
T  40158867 tttggattggcttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagctta-tgacatgtttataagttgtt 40158769  T
Q  363 ttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||| |||||||||||||  | | ||||| ||||||||||||  |||||||    
T  40158768 ttcagcttaattacataagctctccagaataacttatgaaaacaacttattgcttatac 40158710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 12313121 - 12313229
Alignment:
Q  290 actaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaa 389  Q
    |||| ||||| ||||| ||||||||||||| |||| ||||||||||| | || ||  || ||||||||||| ||||| |||| |||||||||||||||||    
T  12313121 actagcataagcacttgtgagattgtttgggagaatttatgaaaacagctta-tgccatgttcataagttgatttcaccttattttcataagctctccaa 12313219  T
Q  390 gacagcttat 399  Q
    || |||||||    
T  12313220 gatagcttat 12313229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 399
Target Start/End: Complemental strand, 33192346 - 33192216
Alignment:
Q  267 aattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttca 366  Q
    |||||| | ||||||| |||||| || ||||||||||| |||||| |||||| |||||||||||||||||   || ||| |||| |||||| ||||||||    
T  33192346 aattggcttatttgagcttatctgctgacataaacactcatgagactgtttg-aagaacttatgaaaacagttta-tgacatatccataagctgttttca 33192249  T
Q  367 gcttaatttcataagctctccaagacagcttat 399  Q
    |||||  || |||||||||||| || |||||||    
T  33192248 gcttatatttataagctctccaggatagcttat 33192216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 406
Target Start/End: Original strand, 35379023 - 35379079
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  35379023 ttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 350 - 421
Target Start/End: Complemental strand, 1625963 - 1625892
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||| ||||||||||| | |||| |||| ||||||||| ||||||| |||||||||||||||||||||    
T  1625963 ttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatac 1625892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 43199740 - 43199840
Alignment:
Q  298 aaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagctt 397  Q
    |||||||| ||||| ||||||| |||| ||| ||| ||||| |  ||| || || |||||||||||||||||||||||||||||| |||||||| |||||    
T  43199740 aaacacttgtgagactgtttgggagaagttacgaatacaacttg-tgacatgtttataagttgttttcagcttaatttcataagccctccaagatagctt 43199838  T
Q  398 at 399  Q
    ||    
T  43199839 at 43199840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 361 - 421
Target Start/End: Original strand, 43985021 - 43985081
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||||||| ||||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  43985021 ttttcagcttattttcataagctcttcaagatagcttatgaaaacaacttataatttatac 43985081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 421
Target Start/End: Complemental strand, 33942058 - 33941901
Alignment:
Q  260 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagtt 359  Q
    ||||||| ||||| | ||||||| |||||||||  |||||  |||  |||| ||||||   | |||||||||||||||| || ||| |  |||||||| |    
T  33942058 ctgtttggattggcttatttgaggttatctactggcataagtactagtgagtttgttt---ataacttatgaaaacaactta-tgacaagttcataagct 33941963  T
Q  360 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    | ||||| |||| | |||||| |||||||||| ||||||| ||||||| |||||||||||||    
T  33941962 gctttcaacttattatcataaactctccaagatagcttatgaaaacaagttataacttatac 33941901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 413
Target Start/End: Complemental strand, 16867805 - 16867739
Alignment:
Q  347 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||||||| |||| || |||||||||||||||| ||||| | |||||| ||||||    
T  16867805 atattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttata 16867739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 40776033 - 40776091
Alignment:
Q  278 ttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    |||||||||||||||||||||| ||||||| |   ||||||||||||||||||||||||    
T  40776033 ttgagtttatctactaacataagcacttataaacctgtttggaagaacttatgaaaaca 40776091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 404
Target Start/End: Complemental strand, 44443391 - 44443330
Alignment:
Q  343 tgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 404  Q
    |||||| |||||||||||||||||||||| ||||||| |||||| |||| ||||||| ||||    
T  44443391 tgaaatgttcataagttgttttcagcttattttcatatgctctcaaagatagcttatgaaaa 44443330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 5902502 - 5902597
Alignment:
Q  295 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaaga 391  Q
    ||||||||||| ||||| |||||||||||||||||||||||| | || ||| || |||||||  ||||||||||||  ||| ||| | |||||||||    
T  5902502 cataaacacttgtgagactgtttggaagaacttatgaaaacagctta-tgacatgttcataaactgttttcagcttgtttttatatgttctccaaga 5902597  T

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Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 420
Target Start/End: Complemental strand, 14666684 - 14666541
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| |||| ||||  ||||||||||| |||||   ||  ||||||  |||| ||||||| || ||| || |||||| |||||||||| |||| |||    
T  14666684 atttgagcttatttacttccataaacacttgtgagacgtttcagaagaatatatggaaacaactta-tgacatgttcataggttgttttcaccttatttt 14666586  T
Q  376 cataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||   |||||| ||||| | ||||||||||||||||||||    
T  14666585 cataagcataccaagatagcttgtgaaaacaacttataacttata 14666541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 28677630 - 28677705
Alignment:
Q  313 tgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaa 389  Q
    ||||||| |||||||||||||||| | || ||| || |||||||||||||||| ||||| || ||||||||||||||    
T  28677630 tgtttgggagaacttatgaaaacagctta-tgacattttcataagttgttttcggcttatttccataagctctccaa 28677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 420
Target Start/End: Original strand, 36863650 - 36863702
Alignment:
Q  368 cttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||| ||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  36863650 cttattttcataagctctccaagatagcttatgaaaacaatttataacttata 36863702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 331
Target Start/End: Complemental strand, 44064589 - 44064517
Alignment:
Q  259 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 331  Q
    ||||||||| |||| |||||||||||||||| |||||||    |||| ||||| |||||||||||||||||||    
T  44064589 cctgtttgatttggatcatttgagtttatctgctaacattggaacttgtgagactgtttggaagaacttatga 44064517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 44606081 - 44606148
Alignment:
Q  313 tgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataag 381  Q
    |||||||||||||||||||||||||| || ||| || | |||||||||||||||||| | |||||||||    
T  44606081 tgtttggaagaacttatgaaaacaactta-tgacatgtccataagttgttttcagctgattttcataag 44606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 4350841 - 4350766
Alignment:
Q  261 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    |||||| ||||| | ||||||| || |||||| |||||| |||||| |||||||||||  ||||||||||||||||    
T  4350841 tgtttggattggcttatttgagcttctctactgacataagcacttaagagattgtttgagagaacttatgaaaaca 4350766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 9478003 - 9477944
Alignment:
Q  362 tttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||| |||| |||||||| ||||||| || ||||||| |||||||||||||||||||||    
T  9478003 tttcaacttattttcataacctctccaggatagcttatgaaaacaacttataacttatac 9477944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 38078417 - 38078480
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||||||| |||| | || |||||||||||||||| ||||||| |||||||| ||||    
T  38078417 ttcataagttgttttgagctcatttacataagctctccaagatagcttatgaaaacaacctata 38078480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 43911006 - 43911077
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||||||||||||| | ||| ||||| ||||||| ||||| | ||||||||||||  |||||||    
T  43911006 ttcataagttgttttcagcttattatcacaagctttccaagatagcttttgaaaacaacttatggcttatac 43911077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 406
Target Start/End: Original strand, 8187407 - 8187516
Alignment:
Q  296 ataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagc 395  Q
    |||| ||||| ||||| |||||| ||||||||||||| ||||| || |||||| |||  ||||||||||||| ||| || ||||| ||||||| |  |||    
T  8187407 ataaccacttgtgagactgtttgaaagaacttatgaatacaactta-tgaaattttcgcaagttgttttcaggttatttccataatctctccatggtagc 8187505  T
Q  396 ttatcaaaaca 406  Q
    |||| ||||||    
T  8187506 ttatgaaaaca 8187516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 29430894 - 29430836
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 334  Q
    ||||||| ||||||||| |||||||||||| || || | ||||||||||||||||||||    
T  29430894 atttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaa 29430836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 7928306 - 7928347
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaaga 391  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  7928306 ttcataagttgttttcagcttattttcataagttctccaaga 7928347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 44590089 - 44590028
Alignment:
Q  358 ttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 419  Q
    |||||||||||||| | ||| ||| ||| ||||| ||||||| |||||||||||||||||||    
T  44590089 ttgttttcagcttattctcacaagttcttcaagatagcttatgaaaacaacttataacttat 44590028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 421
Target Start/End: Original strand, 656787 - 656855
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||| ||||||| |||| ||||||||||||| ||||| ||||||| ||| ||||||| | |||||||    
T  656787 ataagtagttttcatcttattttcataagctctgcaagatagcttatgaaatcaacttacagcttatac 656855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 421
Target Start/End: Complemental strand, 1810716 - 1810657
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||||||| |||||||| |||| ||||| ||||||| |||||||| ||||||||||||    
T  1810716 ttttcagcttattttcataaactcttcaagatagcttataaaaacaac-tataacttatac 1810657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 420
Target Start/End: Original strand, 14299565 - 14299708
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||||||| |||| ||| ||| |||||  | || |||||||||||  ||||| ||||||| || ||| |||| ||||  |||||||||||||| ||     
T  14299565 atttgagtttagctaccaacgtaagcacttgagggactgtttggaagagtttatggaaacaactta-tgacatatccatacattgttttcagcttatttc 14299663  T
Q  376 cataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
     ||||||| || |||| ||| | | ||||||||| ||||||||||    
T  14299664 tataagctgtcaaagatagcctgtgaaaacaactcataacttata 14299708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 407
Target Start/End: Complemental strand, 15978047 - 15977991
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 407  Q
    |||||| |||||||||||||| |||||||| |||||||| | ||||||| |||||||    
T  15978047 tcataaattgttttcagcttattttcataatctctccaaaatagcttatgaaaacaa 15977991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 18840856 - 18840796
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||| |||| || |||||||||||||||||| ||||| ||| || ||||||    
T  18840856 ataagttgttttcatcttatttccataagctctccaagacatcttataaaaccagcttata 18840796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 29510644 - 29510592
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||| |||||||||||||||||||| |||| ||||||  |||||||||||||    
T  29510644 ttttcggcttaatttcataagctctcaaagatagcttaggaaaacaacttata 29510592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 420
Target Start/End: Complemental strand, 35486045 - 35485910
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 383  Q
    ||||||||  ||||||  |||| ||||| ||||||  ||||||||  ||| |||| || ||| || |||||||| ||||||||||| | || |||| |||    
T  35486045 ttatctaccgacataagaacttgtgagactgtttgagagaacttactaaagcaactta-tgatatgttcataagctgttttcagctcatttccataggct 35485947  T
Q  384 ctccaagacagcttatcaaaacaacttataacttata 420  Q
    || || || ||||||| ||||||||||||| ||||||    
T  35485946 cttcaggatagcttataaaaacaacttatagcttata 35485910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 391
Target Start/End: Complemental strand, 36043994 - 36043926
Alignment:
Q  323 aacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaaga 391  Q
    |||||||||||||||| |||   | | |||||||| |||||| |||| |||||||||||||||||||||    
T  36043994 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctctccaaga 36043926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 421
Target Start/End: Complemental strand, 40279249 - 40279189
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||||| | ||||||||| ||||||| | ||||||| ||||||||||||| |||||||    
T  40279249 ttttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttatac 40279189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 421
Target Start/End: Complemental strand, 2142763 - 2142645
Alignment:
Q  304 ttatgagattgtttggaagaacttatgaaaacaacgtactga-aatattcataagttgttttcagcttaatttcataagctct-ccaagacagcttatca 401  Q
    |||||||| ||||||| ||||||||||||||||| ||  ||| ||| ||||| || |||||| |||||| ||||||||  ||| |||||| |  |||| |    
T  2142763 ttatgagactgtttgggagaacttatgaaaacaa-gttgtgacaatgttcattagctgtttttagcttattttcataaattctcccaagataaattatga 2142665  T
Q  402 aaacaacttataacttatac 421  Q
    |||||||||||| |||||||    
T  2142664 aaacaacttatagcttatac 2142645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 9174878 - 9174815
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| | ||||||||||| |||||||||||||  |||| ||||||| |||||| ||||||    
T  9174878 ttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaacagcttata 9174815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 11514047 - 11513972
Alignment:
Q  261 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    |||||| ||||||| ||||||| |||||||||| ||||| ||||| ||||| |||||   ||| ||||||||||||    
T  11514047 tgtttggattggtttatttgagattatctactagcataagcacttgtgagactgttttagagagcttatgaaaaca 11513972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 407
Target Start/End: Complemental strand, 15120311 - 15120189
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 383  Q
    |||||||||| |||||||| || |||   ||||||| ||| |||||| ||||||| || ||| || ||||| || |||||| |||||| ||| |||||||    
T  15120311 ttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaactta-tgacatgttcattagctgttttaagcttattttgataagct 15120213  T
Q  384 ctccaagacagcttatcaaaacaa 407  Q
    ||||| || ||||||  |||||||    
T  15120212 ctccatgatagcttacgaaaacaa 15120189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 383
Target Start/End: Original strand, 16551782 - 16551880
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 383  Q
    ||||||| | ||||||||||||  |||||||||| ||||| |||||| ||| | | || ||| |||| |||||||||| ||||||||| || ||||||||    
T  16551782 ttatctattgacataaacacttgcgagattgtttagaagagcttatggaaagatctta-tgacatatacataagttgtattcagcttatttccataagct 16551880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 29316782 - 29316845
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||| ||||||||||| || |||||| ||||||||| |||| || |||||| ||||||    
T  29316782 ttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttata 29316845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 29628750 - 29628821
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||| |||||||||||||| || |||||  | ||||||| ||||||| | ||||||||||| |||||||    
T  29628750 ttcataaattgttttcagcttatttccataaattttccaagatagcttatgagaacaacttatagcttatac 29628821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 39983394 - 39983335
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||| ||| |||||| ||||||||| || ||||||| ||||||||||||| ||||||    
T  39983394 ttttcagtttattttcattagctctccaggatagcttatgaaaacaacttatagcttata 39983335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 412
Target Start/End: Complemental strand, 40279355 - 40279268
Alignment:
Q  325 cttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||||||||||| ||  | | | |||||||  ||||||||||| | ||||||||| ||||||| | ||||||| ||||||||||||    
T  40279355 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 412
Target Start/End: Complemental strand, 40279425 - 40279338
Alignment:
Q  325 cttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||||||||||| ||  | | | |||||||  ||||||||||| | ||||||||| ||||||| | ||||||| ||||||||||||    
T  40279425 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 41851598 - 41851535
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| | || |||||||||||||||||  ||||||||| ||||| | |||||||||||||    
T  41851598 ttcataagcttttctcagcttaatttcataaattctccaagatagcttctgaaaacaacttata 41851535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 3078651 - 3078709
Alignment:
Q  354 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    ||||||||||| |||||| || || ||||||||||||| ||||||| |||||| |||||    
T  3078651 taagttgtttttagcttatttccagaagctctccaagatagcttataaaaacagcttat 3078709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 6772528 - 6772590
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||| | ||||||||||| ||||||||||||||| ||| | ||||| |||| ||||||||    
T  6772528 tcataagcttttttcagcttactttcataagctctcctagataccttatgaaaataacttata 6772590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 418
Target Start/End: Original strand, 10563567 - 10563633
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    |||||| | ||||||||||| |||| |||||||| ||  | ||||||| ||||||||||||||||||    
T  10563567 cataagctattttcagcttattttcttaagctcttcagcatagcttatgaaaacaacttataactta 10563633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 11488339 - 11488277
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||||||||||||| || ||||| ||||||| || ||||||| ||| || ||||||    
T  11488339 tcataagttgttttcagcttatttgcataatctctccaggatagcttatgaaagcagcttata 11488277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 12140660 - 12140606
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||||||| ||||||||||||| || || |||||  ||||||||||||||||||    
T  12140660 ttatctactgacataaacacttacgaaatagtttgagagaacttatgaaaacaac 12140606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 13867014 - 13866952
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||||| |||||||||  ||||||||||| ||||| ||||||  |||||||| |||||||||    
T  13867014 atttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaac 13866952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 40145580 - 40145526
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||||||| ||||||||||||||||| |||||||  |||||||||  |||||||    
T  40145580 ttatctactgacataaacacttatgagcttgtttgagagaacttatcgaaacaac 40145526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 397
Target Start/End: Original strand, 41809198 - 41809299
Alignment:
Q  295 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacag 394  Q
    ||||||||||| ||||| || ||| |||| ||| || ||||||| || ||| || ||||||||||||||| |||||| || |||||||| || |||| ||    
T  41809198 cataaacacttgtgagactgattgtaagagcttgtggaaacaactta-tgacatgttcataagttgtttttagcttatttccataagctttctaagatag 41809296  T
Q  395 ctt 397  Q
    |||    
T  41809297 ctt 41809299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 410
Target Start/End: Original strand, 1056116 - 1056196
Alignment:
Q  329 tgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 410  Q
    |||||||||| || ||| || ||||| |||||||||||||||  ||||||||||||| || || ||||| | ||||||||||    
T  1056116 tgaaaacaactta-tgacatgttcattagttgttttcagcttgttttcataagctctacatgagagcttgtgaaaacaactt 1056196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 381
Target Start/End: Original strand, 1493518 - 1493551
Alignment:
Q  348 tattcataagttgttttcagcttaatttcataag 381  Q
    |||||||||||||||||||||||| |||||||||    
T  1493518 tattcataagttgttttcagcttattttcataag 1493551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 412
Target Start/End: Complemental strand, 7871705 - 7871644
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    ||||||| ||||||||||||| || |||||||||| ||| | ||||||| |||||| |||||    
T  7871705 tcataaggtgttttcagcttatttccataagctcttcaaaagagcttatgaaaacagcttat 7871644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 415
Target Start/End: Complemental strand, 12289864 - 12289795
Alignment:
Q  346 aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataac 415  Q
    |||||||||||| | |||||| |||| ||||||||| ||||||| | |  |||| |||||||||||||||    
T  12289864 aatattcataagcttttttcaacttattttcataagttctccaatataaattataaaaacaacttataac 12289795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 19333322 - 19333371
Alignment:
Q  340 tactgaaatattcataagttgttttcagcttaatttcataagctctccaa 389  Q
    |||||| || |||||||| |||| |||||||| |||||||||||||||||    
T  19333322 tactgacatgttcataagctgttctcagcttattttcataagctctccaa 19333371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 35378539 - 35378580
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaaga 391  Q
    |||||||||| ||||||||||| ||||||||||| |||||||    
T  35378539 ttcataagttattttcagcttattttcataagctatccaaga 35378580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 412
Target Start/End: Original strand, 39236499 - 39236564
Alignment:
Q  347 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||||||||||||||| |||||| ||| ||||||| |  |||| || |||| ||||||||||||    
T  39236499 atattcataagttgtttttagcttatttttataagctttttaagatagtttattaaaacaacttat 39236564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 40279461 - 40279408
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||||| |||| ||||||||| ||||||| | ||||||| ||||||||||||    
T  40279461 tgttttcaacttattttcataagttctccaatatagcttatgaaaacaacttat 40279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 40400817 - 40400894
Alignment:
Q  259 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    |||||||| ||||| | |||| ||  |||||||| ||||||| |||| ||| |||||||| || ||||||||||||||    
T  40400817 cctgtttggattggcttatttaagcctatctactgacataaagacttgtgacattgtttgaaaaaacttatgaaaaca 40400894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 43065433 - 43065517
Alignment:
Q  325 cttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 410  Q
    |||||||||||||| || ||| || | ||||| |||||||||||||| ||  |||||||||||| || | ||||| ||||||||||    
T  43065433 cttatgaaaacaactta-tgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaacaactt 43065517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 43530032 - 43530105
Alignment:
Q  263 tttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    ||||| |||| | ||||||| | |||||||||||||  ||||| ||||| || |||| ||||||||||||||||    
T  43530032 tttgatttggcttatttgagctaatctactaacatatgcacttgtgagagtgcttgggagaacttatgaaaaca 43530105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 407
Target Start/End: Original strand, 3227691 - 3227747
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 407  Q
    |||||| |||||||||||||| ||||| || |||||||| | ||||||| |||||||    
T  3227691 tcataaattgttttcagcttattttcaaaatctctccaaaatagcttatgaaaacaa 3227747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 6227811 - 6227751
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||||||||||  |  |||||||||||||| | ||||||| ||||| |||||||    
T  6227811 ataagttgttttcagcttgttaccataagctctccaaaatagcttatgaaaaccacttata 6227751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 9530737 - 9530789
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 404  Q
    |||||||| |||| |||||| |||||||||||||||| || ||||||| ||||    
T  9530737 cataagttatttttagcttactttcataagctctccaggatagcttatgaaaa 9530789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 421
Target Start/End: Original strand, 14364197 - 14364257
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||| |||| ||||||||| ||| ||||  ||||  |||||||||||||||||||||||    
T  14364197 ttttcaacttattttcataagttcttcaaggtagctcctcaaaacaacttataacttatac 14364257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 24097861 - 24097813
Alignment:
Q  360 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaac 408  Q
    |||||||||||| |||||||||||||||| || | ||||| ||||||||    
T  24097861 gttttcagcttattttcataagctctccaggataacttatgaaaacaac 24097813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 33942213 - 33942145
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    |||||||| ||||||||||| | |||||| ||||||| | ||  |||||| ||||||||||||| ||||    
T  33942213 ttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttatagctta 33942145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 34652045 - 34652097
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 404  Q
    |||||| |||||||| |||| || |||||||||||||||| ||||||| ||||    
T  34652045 cataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 34927097 - 34927045
Alignment:
Q  278 ttgagtttatctactaacataaacacttatgagattgtttggaagaacttatg 330  Q
    ||||| |||| |||| |||||| ||||||| ||| ||||||||||||||||||    
T  34927097 ttgagcttatttactgacataagcacttataagactgtttggaagaacttatg 34927045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 420
Target Start/End: Original strand, 9956821 - 9956891
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||| |||||||||||| ||||||||| ||||||||| || |||| ||||||||||||||||||||    
T  9956821 ttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaacttataacttata 9956891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 385
Target Start/End: Complemental strand, 6950458 - 6950350
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    |||||||||||||||||  |||||||| || ||||||||||||| ||| |||||| ||||||| || ||| || |  ||||||||||||||||||| ||     
T  6950458 atttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaaccta-tgacatgtcgataagttgttttcagcttatttc 6950360  T
Q  376 cataagctct 385  Q
    ||||||||||    
T  6950359 cataagctct 6950350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 2487927 - 2488004
Alignment:
Q  261 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    |||||| ||||| | ||||||||| ||||||| |||||| ||||| ||||| ||||||| ||||||||||||||||||    
T  2487927 tgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaac 2488004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 16162913 - 16162836
Alignment:
Q  259 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    |||||||| ||||| | |||||||||||||||||| ||||||||||| ||||| ||||||  | ||||||||||||||    
T  16162913 cctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaaca 16162836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 418
Target Start/End: Original strand, 7918699 - 7918848
Alignment:
Q  259 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagt 358  Q
    ||||||||||||| || |||| |  |||||||||| ||||||||||| ||||| ||||||| ||| |||||||||||||| ||         | ||||      
T  7918699 cctgtttgaattgatt-atttaaacttatctactagcataaacacttgtgagactgtttgggagagcttatgaaaacaactta---------ttataatc 7918788  T
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    ||||||||||||| || || ||||||| ||||| ||||||| ||||||||||||| ||||    
T  7918789 tgttttcagcttatttccacaagctctacaagatagcttatgaaaacaacttatagctta 7918848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 27028894 - 27028831
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| | ||||||||||| ||||||||||||||||||| ||||||| |||||| ||||||    
T  27028894 ttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttata 27028831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 413
Target Start/End: Complemental strand, 7714359 - 7714242
Alignment:
Q  295 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacag 394  Q
    ||||||||||| ||||| ||||||||| | ||| || ||||||| || |||||| |  || || |||||||| |||| |||||| |||||||||||| ||    
T  7714359 cataaacacttgtgagactgtttggaaaagcttgtggaaacaactta-tgaaatgtcgatgagctgttttcaacttattttcatgagctctccaagatag 7714261  T
Q  395 cttatcaaaacaacttata 413  Q
    || || |||||||||||||    
T  7714260 ctcatgaaaacaacttata 7714242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 42215089 - 42215143
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 404  Q
    |||||||||||||||||||||| || |||||||||||||||| ||||||| ||||    
T  42215089 ttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaa 42215143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 778505 - 778389
Alignment:
Q  296 ataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagc 395  Q
    |||| ||||| ||||| |||||| ||||||||||||||||||| ||  || |  ||  ||||||||||||| |||| ||||||||||||||||| |  ||    
T  778505 ataagcacttgtgagactgtttgcaagaacttatgaaaacaacataa-gacacgtttgtaagttgttttcaacttactttcataagctctccaacaatgc 778407  T
Q  396 ttatcaaaacaacttata 413  Q
    |||| |||||| ||||||    
T  778406 ttatgaaaacagcttata 778389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 421
Target Start/End: Complemental strand, 34849240 - 34849095
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| ||| |||||  |||||  |||| ||||| ||||||| |||||| ||||||||||| |  ||| || ||||||||  |||||||||| | ||     
T  34849240 atttgagcttagctactggcataagtacttttgagactgtttgggagaactaatgaaaacaactttatgacatgttcataagccgttttcagctgatttc 34849141  T
Q  376 cataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||| ||| ||||| ||||||| | |||| |||||| |||||||    
T  34849140 cataagttctacaagaaagcttatgataacagcttatatcttatac 34849095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 20672813 - 20672757
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    |||||||| ||||||||||||| |||||||||||||||| || ||||||| ||||||    
T  20672813 ttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 28769348 - 28769416
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||||||| || ||||| |||||||| | ||||||| |||||| |||||| ||||||    
T  28769348 cataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttata 28769416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 30918176 - 30918116
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 410  Q
    |||||||||||||||||||||| || |||||||||||||||| | ||||| |||| |||||    
T  30918176 ttcataagttgttttcagcttatttccataagctctccaagaaaacttatgaaaagaactt 30918116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 419
Target Start/End: Original strand, 43717945 - 43718013
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 419  Q
    ||||||| |||||| |||||| ||||||||| ||||||||| |||||||  ||||| ||||||||||||    
T  43717945 tcataagctgtttttagcttactttcataagttctccaagatagcttatgcaaacagcttataacttat 43718013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 331
Target Start/End: Complemental strand, 1664505 - 1664450
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 331  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||| ||| |||||||    
T  1664505 atttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 1664450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 406
Target Start/End: Original strand, 779027 - 779124
Alignment:
Q  308 gagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||||||||| ||||||||| ||||||||| || ||| || ||||||||||||||||| |||| |||  ||  |||||||||| || |||| ||||||    
T  779027 gagattgtttgaaagaacttacgaaaacaactta-tgacatgttcataagttgttttcatcttattttggtacactctccaagatagtttatgaaaaca 779124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 420
Target Start/End: Complemental strand, 30389162 - 30389092
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||||||||| ||||||||| |||| | || ||||||| |||||| | |||| ||||||    
T  30389162 ttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgtatagcttata 30389092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 406
Target Start/End: Original strand, 44236757 - 44236886
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    |||||||||||||||||  ||||| ||||| ||||| |||| || ||||  |||||||| | |  || || ||  || |||||| ||||||||||| |||    
T  44236757 atttgagtttatctactggcataagcacttgtgagactgttcgggagaatctatgaaaatagctcac-gacatgctcttaagttattttcagcttatttt 44236855  T
Q  376 cataagctctccaagacagcttatcaaaaca 406  Q
    |||||||||||||| | ||||||| ||||||    
T  44236856 cataagctctccaatatagcttatgaaaaca 44236886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 4762569 - 4762512
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 410  Q
    |||| |||||||||||||| || |||||||||| ||||| ||||||| ||||||||||    
T  4762569 ataaattgttttcagcttatttacataagctcttcaagatagcttatgaaaacaactt 4762512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 421
Target Start/End: Complemental strand, 8062390 - 8062321
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||| ||||||||||||| || ||||| ||||| |||| ||||||| |||||| |||||| |||||||    
T  8062390 cataagatgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagcttatac 8062321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 413
Target Start/End: Original strand, 11569466 - 11569527
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||||||| ||||| || ||||||| || ||||||| |||||| ||||||    
T  11569466 cataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 421
Target Start/End: Complemental strand, 31862554 - 31862485
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||| ||||||||||||| |||||||||||||| | || | ||||| |||||| |||||| |||||||    
T  31862554 cataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagcttatac 31862485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 421
Target Start/End: Complemental strand, 38421325 - 38421256
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||||||||||| || || ||| ||| ||||| ||||| | ||||||||||| |||||||||    
T  38421325 cataagttgttttcagcttacttacacaagatcttcaagatagcttttgaaaacaacttacaacttatac 38421256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 413
Target Start/End: Complemental strand, 43504879 - 43504751
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 383  Q
    |||||||||  | ||| ||||| || || ||||| | |||||| ||||||||||| ||| ||  | || ||||| ||||||||||||| || |||||| |    
T  43504879 ttatctactggcttaagcacttgtgtgactgtttcggagaactgatgaaaacaacttac-gacttgtttataagctgttttcagcttatttccataagtt 43504781  T
Q  384 ctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| ||||||| |||||| ||||||    
T  43504780 ctccaagatagcttataaaaacatcttata 43504751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 414
Target Start/End: Complemental strand, 1930098 - 1930034
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 414  Q
    |||||||| ||||||||||||| ||||| ||| || |||||| ||||||| |||||| |||||||    
T  1930098 ttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaacagcttataa 1930034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 11745662 - 11745722
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||||||||||| |||||||||||| | | || ||||||| |||||| ||||||    
T  11745662 ataagttgttttcagcttagtttcataagctcactaggatagcttataaaaacagcttata 11745722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 27754464 - 27754404
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||  ||||||||| ||||||||||||||||| | ||||||| ||||| |||||||    
T  27754464 ataagttgcgttcagcttattttcataagctctccaaaatagcttatgaaaaccacttata 27754404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 31705146 - 31705078
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||| ||||||||||||| || ||||| ||||| | |||||||||| |||||| |||||| ||||||    
T  31705146 cataagctgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagcttata 31705078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 420
Target Start/End: Original strand, 31804467 - 31804531
Alignment:
Q  356 agttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||  |||||||||||||| |||| |||| || |||||  |||||||||||||    
T  31804467 agttgttttcagcttcctttcataagctctcaaagatagctcatgaaaactgcttataacttata 31804531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 331
Target Start/End: Original strand, 1892158 - 1892213
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 331  Q
    ||||||||||||||||   ||||||||||| ||||||||||||| ||| |||||||    
T  1892158 atttgagtttatctaccgtcataaacacttgtgagattgtttggcagagcttatga 1892213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 407
Target Start/End: Complemental strand, 12851295 - 12851182
Alignment:
Q  295 cataaacacttatga--gattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagac 392  Q
    ||||||||||| |||  || ||||||| | |||||||||||||| | || | | || |||||||| ||||||| ||||| |||||||||||||| | ||     
T  12851295 cataaacacttgtgatagactgtttgggaaaacttatgaaaacagctta-taacatgttcataagatgttttcggcttattttcataagctctcaaggaa 12851197  T
Q  393 agcttatcaaaacaa 407  Q
    ||||||| |||||||    
T  12851196 agcttatgaaaacaa 12851182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 33714243 - 33714306
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| ||||||||||||| ||| ||||||||||| ||| ||||||| |||| | ||||||    
T  33714243 ttcataagctgttttcagcttatttttataagctctcccagatagcttatgaaaatagcttata 33714306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 412
Target Start/End: Original strand, 2595004 - 2595066
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||||||||||||||||||| | ||||||| | || ||  |||||||| ||||||||||||    
T  2595004 ttcataagttgttttcagcttattctcataagttgtctaatgcagcttatgaaaacaacttat 2595066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 4560638 - 4560584
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatg 330  Q
    ||||||| ||||||| | |||||| ||||| |||| |||||||||||||||||||    
T  4560638 atttgagcttatctattgacataagcacttgtgaggttgtttggaagaacttatg 4560584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 420
Target Start/End: Complemental strand, 5069760 - 5069690
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||  ||||||||||| ||||||||||| || |||| | ||||| |||||| ||||||| |||||    
T  5069760 ttcataagtcattttcagcttattttcataagctttcgaagatatcttatgaaaacagcttataaattata 5069690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 410
Target Start/End: Original strand, 7918412 - 7918513
Alignment:
Q  308 gagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 407  Q
    |||| ||||||| ||| |||||||||||||| ||  || || |||||||| ||||| || |||| ||  ||||||||||||||| ||||||  |||||||    
T  7918412 gagactgtttgggagagcttatgaaaacaacttaa-gacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaacaa 7918510  T
Q  408 ctt 410  Q
    |||    
T  7918511 ctt 7918513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 420
Target Start/End: Complemental strand, 8060732 - 8060662
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||| ||||||||||| || ||||||||||| | ||  |||||| |||||| ||||||| |||||    
T  8060732 ttcataagttattttcagcttatttccataagctctctaggattgcttatgaaaacagcttataagttata 8060662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 21653144 - 21653098
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagct 396  Q
    |||||||| | ||||||||||| ||||||||||||||||||| ||||    
T  21653144 ttcataagctattttcagcttattttcataagctctccaagatagct 21653098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 37353253 - 37353319
Alignment:
Q  347 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||  ||||||||| ||| |||||||||||||| |||| ||||||  |||||| ||||||    
T  37353253 atattcataaactgttttcagattattttcataagctctcaaagatagcttaagaaaacagcttata 37353319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 38648413 - 38648343
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    ||||||| | |||| ||| |||||||||||| ||| ||||| ||||||| ||||||||| ||||| |||||    
T  38648413 tcataagcttttttaagcgtaatttcataagttctacaagatagcttatgaaaacaactcataacatatac 38648343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 418
Target Start/End: Original strand, 6864477 - 6864534
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    ||||||||||| || |  ||||||||||| | ||||||| ||||||||||||||||||    
T  6864477 ttttcagcttatttcctcaagctctccaaaatagcttatgaaaacaacttataactta 6864534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 11494208 - 11494155
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 404  Q
    ||||||| || |||||||||| ||||||||||||| ||||| ||||||| ||||    
T  11494208 tcataagctgctttcagcttattttcataagctcttcaagatagcttatgaaaa 11494155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 420
Target Start/End: Complemental strand, 11795146 - 11795085
Alignment:
Q  359 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||||| || |||||||||||||  | ||||||| ||| || |||||||||||||    
T  11795146 tgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttata 11795085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 13652347 - 13652298
Alignment:
Q  281 agtttatctactaacataaacacttatgagattgtttggaagaacttatg 330  Q
    |||||||||||| |||||| ||||| |||| |||||||||||| ||||||    
T  13652347 agtttatctactcacataagcacttgtgaggttgtttggaagagcttatg 13652298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 13710990 - 13710941
Alignment:
Q  281 agtttatctactaacataaacacttatgagattgtttggaagaacttatg 330  Q
    |||||||||||| |||||| ||||| |||| |||||||||||| ||||||    
T  13710990 agtttatctactcacataagcacttgtgaggttgtttggaagagcttatg 13710941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 413
Target Start/End: Original strand, 30191075 - 30191211
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||||||||||| |  ||||| ||||| | ||| ||||||| ||| |||||| ||||||| || ||| || |||| || |||||||||||||| ||     
T  30191075 atttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaactta-tgacatgttcaaaacttgttttcagcttatttc 30191173  T
Q  376 cataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||| |  | || || |||||||||||| | ||||||    
T  30191174 cataaacatttcaggatagcttatcaaaatagcttata 30191211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 413
Target Start/End: Original strand, 30277254 - 30277315
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||||||| || ||||| ||||| | || ||||||| |||||| ||||||    
T  30277254 cataagttgttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 413
Target Start/End: Original strand, 39551143 - 39551279
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    ||||||| ||||||||  | |||| || || ||| | ||||||| |||| ||||| ||||||| || ||| || | || ||| |||||| | |||| |||    
T  39551143 atttgagattatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaactta-tgacatgtccaaaagctgtttttaacttatttt 39551241  T
Q  376 cataagctctccaagacagcttatcaaaacaacttata 413  Q
     |||||||||||| || ||||||| |||||||||||||    
T  39551242 tataagctctccaggaaagcttatgaaaacaacttata 39551279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 2213552 - 2213484
Alignment:
Q  268 attggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    ||||||| ||||||  |||||||||| ||||||||||| ||| | ||||||| || | |||||||||||    
T  2213552 attggtttatttgaaattatctactagcataaacacttgtgatactgtttggtagtagttatgaaaaca 2213484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 414
Target Start/End: Complemental strand, 11185284 - 11185220
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 414  Q
    ||||||||||||||||| |||| || ||| ||||||||| || |||| |  ||||||||||||||    
T  11185284 ttcataagttgttttcaacttatttccatcagctctccatgatagctaacgaaaacaacttataa 11185220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 39881769 - 39881821
Alignment:
Q  360 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||||||||||| || ||||||||||||| || ||||||| ||||||| ||||    
T  39881769 gttttcagcttatttccataagctctccatgatagcttataaaaacaatttat 39881821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 406
Target Start/End: Original strand, 30573857 - 30573977
Alignment:
Q  285 tatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctc 384  Q
    |||||||| |||||| ||||| |||| |||||||  |||||||||||||||||  || ||  || |||||||| |||||||||||||  ||||| |||||    
T  30573857 tatctactgacataagcacttgtgagtttgtttgtgagaacttatgaaaacaaatta-tggcatgttcataagctgttttcagcttatgttcatcagctc 30573955  T
Q  385 tccaagacagcttatcaaaaca 406  Q
    ||||||| ||||||| ||||||    
T  30573956 tccaagatagcttatgaaaaca 30573977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 420
Target Start/End: Complemental strand, 43115184 - 43115049
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 383  Q
    ||||||| | |||||| ||||| |||||||||||||||||  ||||| ||||||| || ||| || | ||||| |||||||||||||| || ||||||||    
T  43115184 ttatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaactta-tgacatgtccataacttgttttcagcttatttccataagct 43115086  T
Q  384 ctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||| | || || | || ||||||||||||| ||||||    
T  43115085 ctcaatgatagttcatgaaaacaacttatagcttata 43115049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 30657438 - 30657375
Alignment:
Q  260 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaaga 323  Q
    |||||||||||| || ||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  30657438 ctgtttgaattgatttatttgagtttatctactgacataagcacttttgagattgtttggaaga 30657375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 315 - 421
Target Start/End: Original strand, 39602183 - 39602288
Alignment:
Q  315 tttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 414  Q
    ||||||||| |||||||| ||| | || ||| || ||||||| ||||||||| |||| ||||||||| |||| |||| ||||||| |||||| |||||||    
T  39602183 tttggaagagcttatgaagacagctta-tgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttataa 39602281  T
Q  415 cttatac 421  Q
    |||||||    
T  39602282 cttatac 39602288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 413
Target Start/End: Complemental strand, 21367767 - 21367667
Alignment:
Q  313 tgtttggaagaacttatgaaaacaacgtactgaaata-ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 411  Q
    ||||||| |||||||||||||||| | || ||| ||  |||| ||| ||||||||||||| ||||||||| ||||||||| ||||||| |||||||||||    
T  21367767 tgtttgggagaacttatgaaaacagctta-tgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaactta 21367669  T
Q  412 ta 413  Q
    ||    
T  21367668 ta 21367667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 44014715 - 44014792
Alignment:
Q  259 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    |||||||| ||||| | |||||||||||||||||| ||||||||||| ||||| ||||||  | ||||||||||||||    
T  44014715 cctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaaca 44014792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 388
Target Start/End: Complemental strand, 24281183 - 24281072
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    |||||||| ||||||||   |||| ||||| || |||||||||  ||| |||||||||||||| || ||| || | ||||||||||||||| |||| |||    
T  24281183 atttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaactta-tgatatctccataagttgttttcaacttacttt 24281085  T
Q  376 cataagctctcca 388  Q
    |||||||||||||    
T  24281084 cataagctctcca 24281072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 40665492 - 40665424
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    |||||||| ||||||||||||| ||| ||||||||||||||| | ||||| |||||| |||||||||||    
T  40665492 ttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaacatcttataactta 40665424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 402549 - 402620
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||| ||||||||||||||||||| ||| ||| ||||| || |||| |||||| ||||||||||||||    
T  402549 ttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatac 402620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 420
Target Start/End: Original strand, 14548680 - 14548798
Alignment:
Q  301 cacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatc 400  Q
    ||||| ||||| ||||||  ||| ||||||||||||||||| ||| || || ||| | ||||||||||||| || |||||||||||||  | | |||||     
T  14548680 cacttgtgagactgtttgagagagcttatgaaaacaacgta-tgacattttaataggctgttttcagcttatttccataagctctccagaataacttatg 14548778  T
Q  401 aaaacaacttataacttata 420  Q
    ||||||||||||| ||||||    
T  14548779 aaaacaacttatagcttata 14548798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 411
Target Start/End: Original strand, 54837000 - 54837102
Alignment:
Q  308 gagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 407  Q
    |||| |||||||||||| ||||||||||| | || ||| || ||||||| |||||||| ||||| ||| ||||||| ||||||| ||||||| |||| ||    
T  54837000 gagactgtttggaagaatttatgaaaacagctta-tgacatgttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataa 54837098  T
Q  408 ctta 411  Q
    ||||    
T  54837099 ctta 54837102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 41848650 - 41848708
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 334  Q
    |||||||||||||||||||||||||||||| | |||||||||| | || ||||||||||    
T  41848650 atttgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaa 41848708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 421
Target Start/End: Complemental strand, 45541687 - 45541563
Alignment:
Q  296 ataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagc 395  Q
    |||||||||| | ||| ||||| |||||||||||||||||| | || ||| || |||||||| ||||||||| ||| | ||||||| | ||||||| |||    
T  45541687 ataaacacttgtaagactgtttagaagaacttatgaaaacagctta-tgacatgttcataagctgttttcaggttattctcataagttatccaagatagc 45541589  T
Q  396 ttatcaaaacaacttataacttatac 421  Q
    |||| |||| ||  |||| |||||||    
T  45541588 ttatgaaaataaactatagcttatac 45541563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 421
Target Start/End: Complemental strand, 1816674 - 1816575
Alignment:
Q  321 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||| |||||||| ||| || ||| || |||||| | ||||||||||||| ||| ||||||||||||  | ||||||| ||||||||||||| ||||||    
T  1816674 agaacatatgaaaataactta-tgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttata 1816576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 366 - 413
Target Start/End: Original strand, 18405854 - 18405901
Alignment:
Q  366 agcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  18405854 agcttaatttcataagttctccaagatagcttatgaaaacaacttata 18405901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 20669235 - 20669172
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| ||||||| ||||| || |||||||||||||||| ||||||| |||||| ||||||    
T  20669235 ttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttata 20669172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 25776180 - 25776117
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| ||||||||||||| || |||||| ||| ||||||| ||||| |||||||||||||    
T  25776180 ttcataagctgttttcagcttacttccataagttcttcaagacaacttatgaaaacaacttata 25776117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 33883757 - 33883820
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||||||||||||||||| ||||||||| |||| |||| |||||||  ||||||| ||||    
T  33883757 ttcataagttgttttcagcttattttcataagttctctaagatagcttatgtaaacaacatata 33883820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 417
Target Start/End: Original strand, 34610813 - 34610880
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 417  Q
    ||||||||| |||||||||| | ||||||||| || |||||| ||||||| ||| |||||||||||||    
T  34610813 ttcataagtggttttcagctgattttcataagttcgccaagatagcttatgaaagcaacttataactt 34610880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 36887567 - 36887504
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| ||||||||||||| ||||||||| ||| |||||  |||||| |||||||||||||    
T  36887567 ttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaacaacttata 36887504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 406
Target Start/End: Complemental strand, 37273239 - 37273141
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||| ||||||| ||| |||||| ||||||| || ||| || | ||||||||||||||| |||| || |||||| ||||||||| ||||||| ||||||    
T  37273239 tgagactgtttgggagagcttatggaaacaactta-tgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaaca 37273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 414
Target Start/End: Complemental strand, 51130851 - 51130749
Alignment:
Q  311 attgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 410  Q
    ||||||||| ||| ||||||||||| | ||| ||| || | ||||||||| |||||||||| |||||  ||||||||| || ||||||| |||||| |||    
T  51130851 attgtttgggagagcttatgaaaaccatgta-tgacatgtccataagttgctttcagcttattttcaatagctctccatgatagcttatgaaaacacctt 51130753  T
Q  411 ataa 414  Q
    ||||    
T  51130752 ataa 51130749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 53789468 - 53789531
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| | ||||||||||||||||||||| |||||| || ||||||| | |||||||||||    
T  53789468 ttcataagcttttttcagcttaatttcataagttctccatgatagcttatgataacaacttata 53789531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 418
Target Start/End: Original strand, 1217809 - 1217875
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 418  Q
    ||||||||||||||| |||| ||||||||| |||| | || ||||||| |||||| |||||||||||    
T  1217809 cataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttataactta 1217875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 2719529 - 2719475
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||||||||| |||||||| ||||||||| ||||||||| ||||||| ||||||    
T  2719529 cataagttgttctcagcttattttcataagttctccaagatagcttatgaaaaca 2719475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 420
Target Start/End: Complemental strand, 11253653 - 11253495
Alignment:
Q  260 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagtt 359  Q
    ||||||||||||  | ||||||| |||||||||| ||||| |||||  |||| ||||||| |||| |||| |||||||| || ||| ||||  ||||  |    
T  11253653 ctgtttgaattgacttatttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaactta-tgacatatctataaact 11253555  T
Q  360 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||| || || | ||||||||| | || |||||||  ||||| |||||| ||||||    
T  11253554 gttttcagcctatttccctaagctctctaggatagcttat-gaaacagcttatagcttata 11253495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 25459548 - 25459616
Alignment:
Q  260 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaactta 328  Q
    ||||||| |||| || ||||||| ||||| |||| ||||| ||||| ||||||||||||||||| ||||    
T  25459548 ctgtttggattgatttatttgagcttatcaactagcataagcacttgtgagattgtttggaagagctta 25459616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 34383002 - 34382934
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 421  Q
    |||||||||||||| |||| |||| |||||| | || || ||||||| |||| ||||||||||||||||    
T  34383002 ataagttgttttcatcttattttcttaagcttttcaggatagcttatgaaaagaacttataacttatac 34382934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 34924547 - 34924599
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 404  Q
    |||| ||||||||||||||| |||||||||||||| |||| ||||||| ||||    
T  34924547 catatgttgttttcagcttattttcataagctctctaagatagcttatgaaaa 34924599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 47249455 - 47249534
Alignment:
Q  311 attgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaaga 391  Q
    |||||||| |||||||||||||||| || || ||| || |||||||||||||||  ||||| |||||||||  ||||||||    
T  47249455 attgtttgaaagaacttatgaaaaccactta-tgacatgttcataagttgtttttggcttattttcataagtcctccaaga 47249534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 47513765 - 47513670
Alignment:
Q  300 acacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagct 396  Q
    |||||| ||||| |||| || || ||||||||||||||  || ||| |  |||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  47513765 acacttgtgagactgttcgggaggacttatgaaaacaagtta-tgacacgttcataagttgttttcaatttattttcataagctctccaagatagct 47513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 39980792 - 39980729
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    |||||||| | |||||| |||| ||||||||| ||||||| | ||||||| |||||||||||||    
T  39980792 ttcataagcttttttcaacttattttcataagttctccaatatagcttataaaaacaacttata 39980729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 412
Target Start/End: Complemental strand, 41633420 - 41633361
Alignment:
Q  353 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    |||| |||||||||||||| ||||||||||||||||| | |||| || |||||| |||||    
T  41633420 ataaattgttttcagcttattttcataagctctccaaaatagctgatgaaaacagcttat 41633361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 383
Target Start/End: Complemental strand, 42745174 - 42745068
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 375  Q
    |||| ||||||  ||||| ||||| ||||| ||| ||| ||| |||||| ||||| ||||||| || ||| || ||||||||||||||||| |||| ||     
T  42745174 atttaagtttacttactatcataagcacttgtgatattatttagaagaatttatgtaaacaactta-tgacatgttcataagttgttttcatcttatttc 42745076  T
Q  376 cataagct 383  Q
    ||||||||    
T  42745075 cataagct 42745068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 44237571 - 44237524
Alignment:
Q  258 acctgtttgaattggttcatttgagtttatctactaacataaacactt 305  Q
    |||||||| |||||||| ||||||||||||||||| |||||| |||||    
T  44237571 acctgtttaaattggtttatttgagtttatctactgacataagcactt 44237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 420
Target Start/End: Original strand, 48286729 - 48286887
Alignment:
Q  261 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttg 360  Q
    ||||||||||| || ||||||| ||||||||  ||| |||||| | ||||| | || || |||||||||||||||||| ||| || || | |||||   |    
T  48286729 tgtttgaattgatttatttgagcttatctacggacaaaaacacctttgagactattagggagaacttatgaaaacaacctac-gacatgtccataaaccg 48286827  T
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    || |||||||| ||  ||||||||| || || | ||||| ||||||  ||||||||||||    
T  48286828 ttatcagcttatttctataagctctacatgataacttatgaaaacagtttataacttata 48286887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 411
Target Start/End: Complemental strand, 2825199 - 2825149
Alignment:
Q  361 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 411  Q
    |||| |||||| ||||||||||||||||||| ||||||| |||| ||||||    
T  2825199 ttttaagcttattttcataagctctccaagatagcttatgaaaataactta 2825149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 419
Target Start/End: Original strand, 24085316 - 24085414
Alignment:
Q  321 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 419  Q
    |||||||||||||||| | ||  | | | |||||| | ||||||||||||| ||||| ||| ||||||||| ||||||  ||||||| ||||| |||||    
T  24085316 agaacttatgaaaacagcttatggtactgttcatacgctgttttcagcttattttcacaagttctccaagatagcttacaaaaacaaattatagcttat 24085414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 50211863 - 50211809
Alignment:
Q  284 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    |||||||||||||||| ||||| | ||| ||||||  ||||||||||||||||||    
T  50211863 ttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaac 50211809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 419
Target Start/End: Original strand, 50600149 - 50600254
Alignment:
Q  313 tgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 412  Q
    ||||||||||||||||| ||||||||  | ||| || | ||  || ||||||||||||| ||||||||| ||||||| | |||| || |||||| |||||    
T  50600149 tgtttggaagaacttataaaaacaactca-tgacatgtccacgagctgttttcagcttattttcataagttctccaatatagctgatgaaaacagcttat 50600247  T
Q  413 aacttat 419  Q
    | |||||    
T  50600248 agcttat 50600254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 420
Target Start/End: Complemental strand, 52619066 - 52618996
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||| | |||||| |||| ||||| ||||||| ||||| ||||| | |||||| |||||||||||||    
T  52619066 ttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataacttata 52618996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 420
Target Start/End: Original strand, 1125778 - 1125843
Alignment:
Q  355 aagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||| |||||||||| || |||||||||||||||| | ||||  ||||||| ||||| ||||||    
T  1125778 aagttgctttcagcttacttccataagctctccaagataacttaagaaaacaagttatagcttata 1125843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 21574595 - 21574515
Alignment:
Q  307 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctcca 388  Q
    ||||| ||||||| ||| |||||||||||||| || ||| || |||||||| || ||| |||||| || |||||||||||||    
T  21574595 tgagactgtttgggagagcttatgaaaacaactta-tgacatgttcataagctgcttttagcttatttccataagctctcca 21574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 413
Target Start/End: Complemental strand, 25186046 - 25185985
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||||||||| |||| ||||| ||| | ||||||| ||||||| ||||| |||||||    
T  25186046 cataagttgttttcatcttattttcacaagatttccaagatagcttataaaaaccacttata 25185985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 333
Target Start/End: Original strand, 35903085 - 35903158
Alignment:
Q  260 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaa 333  Q
    ||||||||||||  | ||||||||| ||| |||||||||| ||||||||| | |||||   |||||||||||||    
T  35903085 ctgtttgaattgacttatttgagttcatcaactaacataagcacttatgacactgtttcagagaacttatgaaa 35903158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Complemental strand, 40665555 - 40665514
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgttt 317  Q
    |||| ||||||||||||||||||||||||||  |||||||||    
T  40665555 atttaagtttatctactaacataaacacttagtagattgttt 40665514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 420
Target Start/End: Original strand, 44061032 - 44061100
Alignment:
Q  351 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||| |||||| |||||||||||||||| |||| |||| | | ||| ||||||||||||| ||||||    
T  44061032 tcataagctgtttt-agcttaatttcataagttctctaagatatcatatgaaaacaacttatagcttata 44061100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 389
Target Start/End: Complemental strand, 48991912 - 48991875
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaa 389  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  48991912 cataagttgttttcagcttattttcataatctctccaa 48991875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 16790387 - 16790439
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 404  Q
    |||||| ||||||||| ||| ||||||||||| ||||||| ||||||| ||||    
T  16790387 cataagctgttttcagtttattttcataagctatccaagatagcttatgaaaa 16790439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 396
Target Start/End: Original strand, 21862184 - 21862228
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagct 396  Q
    |||||||||||||||||||| || |||||||||||| ||| ||||    
T  21862184 cataagttgttttcagcttatttccataagctctcccagatagct 21862228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 413
Target Start/End: Complemental strand, 22203470 - 22203430
Alignment:
Q  373 tttcataagctctccaagacagcttatcaaaacaacttata 413  Q
    ||||||||| ||||||||| ||||||| |||||||||||||    
T  22203470 tttcataagttctccaagatagcttatgaaaacaacttata 22203430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 23785316 - 23785248
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    |||||||||||||||||||  || ||||||||||||| || ||||| | ||||||  ||||| ||||||    
T  23785316 cataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttata 23785248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 24785268 - 24785212
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 406  Q
    ||||||||||||||| |||||| || ||||||||||| | || ||||||| ||||||    
T  24785268 ttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaaca 24785212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 25447677 - 25447625
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaactta 328  Q
    |||| ||||| ||| || |||||| |||||||||||||||| |||||||||||    
T  25447677 attttagtttctctcctgacataagcacttatgagattgttaggaagaactta 25447625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 26330248 - 26330363
Alignment:
Q  267 aattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttca 366  Q
    ||||| || ||||||| ||||||||| | ||||  | || ||||| ||||| ||||| |||||||||||||| | |||| || |||||| ||| ||||||    
T  26330248 aattgatttatttgaggttatctactgaaataagtatttgtgagactgtttagaagagcttatgaaaacaac-ttctgacatgttcataggttcttttca 26330346  T
Q  367 gcttaatttcataagct 383  Q
    | ||| || ||||||||    
T  26330347 ggttatttccataagct 26330363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 388
Target Start/End: Original strand, 34414793 - 34414829
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctcca 388  Q
    |||||||||||||||||||| |||||||| |||||||    
T  34414793 cataagttgttttcagcttattttcataaactctcca 34414829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 48397703 - 48397651
Alignment:
Q  286 atctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    |||||||| ||||| || || ||||||||||||||||| || |||||||||||    
T  48397703 atctactagcataagcatttgtgagattgtttggaagagctaatgaaaacaac 48397651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 49465599 - 49465659
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 336  Q
    |||| ||||||| ||||| ||||| ||||| ||| ||||||| | ||||||||||||||||    
T  49465599 atttcagtttatttactaccataagcacttgtgatattgtttcggagaacttatgaaaaca 49465659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 50016017 - 50015957
Alignment:
Q  281 agtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgta 341  Q
    |||||||||| |  ||||||||||| ||||| ||||||  |||||||||||||| ||||||    
T  50016017 agtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgta 50015957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 16171 - 16103
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 420  Q
    ||||||||||||||| |||| || ||||| || ||||||||||||||  ||||||||||||| ||||||    
T  16171 cataagttgttttcaacttatttccataatctttccaagacagcttaggaaaacaacttatatcttata 16103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 331
Target Start/End: Complemental strand, 6946 - 6891
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 331  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||| ||| |||||||    
T  6946 atttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 9712 - 9774
Alignment:
Q  276 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 338  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||| ||| | |||| |||||||    
T  9712 atttgagtttatctactaacataaatacttgtgagactgtttgggagagcctatggaaacaac 9774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 4942 - 4991
Alignment:
Q  350 ttcataagttgttttcagcttaatttcataagctctccaagacagcttat 399  Q
    ||||||||||||||||||||||| | |||||||||||||||  |||||||    
T  4942 ttcataagttgttttcagcttaactccataagctctccaaggtagcttat 4991  T

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Target: scaffold0064 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 53758 - 53823
Alignment:
Q  259 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaa 324  Q
    |||||||| |||| ||||||||  |||||||| || ||||||||||  ||||||||||||||||||    
T  53758 cctgtttggattgattcatttggttttatctagtagcataaacactgttgagattgtttggaagaa 53823  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 410
Target Start/End: Complemental strand, 306387 - 306329
Alignment:
Q  352 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 410  Q
    |||||| ||||||||||||| || ||||||||||| | || ||||||| ||||||||||    
T  306387 cataagctgttttcagcttacttacataagctctctaggatagcttatgaaaacaactt 306329  T

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