View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16273_high_3 (Length: 252)

Name: NF16273_high_3
Description: NF16273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16273_high_3
NF16273_high_3
[»] chr6 (32 HSPs)
chr6 (14-71)||(15443685-15443742)
chr6 (14-71)||(7265605-7265662)
chr6 (14-71)||(13851726-13851783)
chr6 (14-54)||(30866156-30866196)
chr6 (14-53)||(9617442-9617481)
chr6 (14-69)||(13360384-13360439)
chr6 (14-52)||(9629392-9629430)
chr6 (14-71)||(19040342-19040399)
chr6 (14-71)||(34073359-34073416)
chr6 (14-54)||(7377986-7378026)
chr6 (14-54)||(9025506-9025546)
chr6 (14-54)||(33468394-33468434)
chr6 (14-53)||(5462694-5462733)
chr6 (15-53)||(2140494-2140532)
chr6 (15-53)||(7569181-7569219)
chr6 (13-71)||(9658869-9658927)
chr6 (17-71)||(10770689-10770743)
chr6 (19-53)||(29049893-29049927)
chr6 (15-53)||(32299283-32299321)
chr6 (14-51)||(9024188-9024225)
chr6 (16-53)||(31579239-31579276)
chr6 (14-71)||(32313394-32313451)
chr6 (24-53)||(33141266-33141295)
chr6 (14-54)||(1532247-1532287)
chr6 (14-54)||(7086802-7086842)
chr6 (14-54)||(7996390-7996430)
chr6 (14-54)||(8022371-8022411)
chr6 (14-54)||(8931614-8931654)
chr6 (14-54)||(9195766-9195806)
chr6 (14-54)||(20371122-20371162)
chr6 (14-54)||(26562696-26562736)
chr6 (14-54)||(33001301-33001341)
[»] chr8 (30 HSPs)
chr8 (20-71)||(14227212-14227263)
chr8 (14-71)||(13203631-13203688)
chr8 (14-54)||(4611541-4611581)
chr8 (14-90)||(14134670-14134746)
chr8 (14-54)||(31236589-31236629)
chr8 (14-53)||(3508060-3508099)
chr8 (13-56)||(7658468-7658511)
chr8 (14-53)||(8798843-8798882)
chr8 (14-53)||(34201058-34201097)
chr8 (14-69)||(34897077-34897132)
chr8 (14-53)||(37225755-37225794)
chr8 (23-68)||(2648269-2648314)
chr8 (20-69)||(29447128-29447177)
chr8 (14-54)||(12606841-12606881)
chr8 (16-60)||(24017452-24017496)
chr8 (15-54)||(3025558-3025597)
chr8 (14-53)||(12985400-12985439)
chr8 (17-60)||(26434181-26434224)
chr8 (14-53)||(29198491-29198530)
chr8 (14-71)||(4786350-4786407)
chr8 (14-87)||(18964151-18964224)
chr8 (16-52)||(9382981-9383017)
chr8 (19-51)||(10441213-10441245)
chr8 (14-54)||(13844608-13844648)
chr8 (14-54)||(14731719-14731759)
chr8 (15-71)||(20679408-20679464)
chr8 (14-54)||(20785477-20785517)
chr8 (14-54)||(24362214-24362254)
chr8 (14-54)||(27213554-27213594)
chr8 (14-54)||(39954291-39954331)
[»] chr5 (32 HSPs)
chr5 (17-90)||(8419997-8420071)
chr5 (15-85)||(30098301-30098372)
chr5 (19-53)||(18607114-18607148)
chr5 (14-90)||(3966473-3966550)
chr5 (14-55)||(22423824-22423865)
chr5 (14-54)||(6471901-6471941)
chr5 (19-71)||(32444756-32444808)
chr5 (14-53)||(32630747-32630786)
chr5 (14-53)||(38749575-38749614)
chr5 (17-71)||(6326312-6326366)
chr5 (19-53)||(11596472-11596506)
chr5 (15-53)||(28588687-28588725)
chr5 (14-56)||(35017042-35017084)
chr5 (20-53)||(9449477-9449510)
chr5 (18-71)||(19438333-19438386)
chr5 (17-54)||(27932242-27932279)
chr5 (17-54)||(31084330-31084367)
chr5 (15-71)||(5467991-5468047)
chr5 (14-54)||(17593734-17593774)
chr5 (14-54)||(18592080-18592120)
chr5 (14-54)||(23012420-23012460)
chr5 (14-50)||(24273042-24273078)
chr5 (14-50)||(24389136-24389172)
chr5 (21-53)||(28296336-28296368)
chr5 (14-54)||(30502400-30502440)
chr5 (14-54)||(30542743-30542783)
chr5 (14-66)||(31695407-31695459)
chr5 (14-54)||(32766955-32766995)
chr5 (14-54)||(36838550-36838590)
chr5 (14-54)||(41091269-41091309)
chr5 (17-49)||(41558669-41558701)
chr5 (14-50)||(43208286-43208322)
[»] chr1 (43 HSPs)
chr1 (19-69)||(3921659-3921709)
chr1 (14-71)||(6427340-6427397)
chr1 (14-60)||(7918223-7918269)
chr1 (15-53)||(40747786-40747824)
chr1 (15-56)||(34298441-34298482)
chr1 (16-71)||(9033021-9033077)
chr1 (18-86)||(9828019-9828087)
chr1 (14-62)||(10233252-10233300)
chr1 (19-71)||(21057773-21057825)
chr1 (14-54)||(34712395-34712435)
chr1 (15-71)||(36878451-36878507)
chr1 (14-54)||(40181878-40181918)
chr1 (14-70)||(41017416-41017472)
chr1 (15-47)||(46914052-46914084)
chr1 (14-53)||(1864892-1864931)
chr1 (14-53)||(17425105-17425144)
chr1 (19-54)||(26238129-26238164)
chr1 (25-71)||(609481-609527)
chr1 (17-71)||(10572604-10572658)
chr1 (19-53)||(11571593-11571627)
chr1 (14-56)||(14332654-14332696)
chr1 (19-53)||(17080898-17080932)
chr1 (15-53)||(24176380-24176418)
chr1 (14-56)||(25361891-25361933)
chr1 (17-71)||(38078676-38078730)
chr1 (15-53)||(39101195-39101233)
chr1 (16-90)||(43492508-43492582)
chr1 (19-53)||(43609835-43609869)
chr1 (19-53)||(43942332-43942366)
chr1 (17-54)||(1262891-1262928)
chr1 (16-53)||(2288181-2288218)
chr1 (14-71)||(2445860-2445917)
chr1 (17-54)||(5376515-5376552)
chr1 (14-51)||(19324572-19324609)
chr1 (14-51)||(25098567-25098604)
chr1 (17-54)||(31015050-31015087)
chr1 (14-51)||(44482240-44482277)
chr1 (24-53)||(48785286-48785315)
chr1 (15-71)||(398778-398834)
chr1 (14-54)||(9709827-9709867)
chr1 (19-51)||(10799680-10799712)
chr1 (18-54)||(12443476-12443512)
chr1 (14-54)||(30847732-30847772)
[»] chr4 (33 HSPs)
chr4 (14-71)||(36635314-36635371)
chr4 (15-53)||(19230322-19230360)
chr4 (26-88)||(32273550-32273612)
chr4 (14-63)||(7214534-7214583)
chr4 (17-52)||(44796977-44797012)
chr4 (14-71)||(35723396-35723454)
chr4 (19-68)||(21345550-21345599)
chr4 (20-69)||(24613719-24613768)
chr4 (23-71)||(8820398-8820446)
chr4 (13-53)||(43300624-43300664)
chr4 (14-53)||(903930-903969)
chr4 (16-51)||(2234260-2234295)
chr4 (14-53)||(5176992-5177031)
chr4 (15-54)||(8423731-8423770)
chr4 (14-53)||(18513253-18513292)
chr4 (14-53)||(22440612-22440651)
chr4 (16-51)||(26276023-26276058)
chr4 (14-53)||(43299983-43300022)
chr4 (19-53)||(5654608-5654642)
chr4 (19-53)||(10546156-10546190)
chr4 (15-53)||(24343515-24343553)
chr4 (14-60)||(37698713-37698759)
chr4 (14-52)||(46180948-46180986)
chr4 (20-53)||(12077836-12077869)
chr4 (17-54)||(14465090-14465127)
chr4 (16-53)||(32910559-32910596)
chr4 (14-71)||(33950126-33950183)
chr4 (19-71)||(680005-680057)
chr4 (14-54)||(3712521-3712561)
chr4 (17-53)||(23915137-23915173)
chr4 (14-54)||(35952629-35952669)
chr4 (14-54)||(40613457-40613497)
chr4 (15-55)||(54580036-54580076)
[»] chr2 (25 HSPs)
chr2 (17-70)||(44605154-44605207)
chr2 (14-53)||(19613625-19613664)
chr2 (15-71)||(12668436-12668492)
chr2 (15-71)||(18420447-18420503)
chr2 (14-54)||(21616769-21616809)
chr2 (15-71)||(36756357-36756413)
chr2 (14-53)||(18570980-18571019)
chr2 (18-53)||(40681990-40682025)
chr2 (24-62)||(2073941-2073979)
chr2 (14-56)||(5367197-5367239)
chr2 (19-53)||(10250734-10250768)
chr2 (15-53)||(19573986-19574024)
chr2 (16-54)||(21782832-21782870)
chr2 (15-53)||(23921261-23921299)
chr2 (15-53)||(30563417-30563455)
chr2 (16-53)||(4332934-4332971)
chr2 (15-56)||(25846746-25846787)
chr2 (17-53)||(12933751-12933787)
chr2 (14-54)||(23718033-23718073)
chr2 (14-54)||(24105705-24105745)
chr2 (16-68)||(28412343-28412395)
chr2 (14-54)||(28677916-28677956)
chr2 (14-54)||(30471045-30471085)
chr2 (14-54)||(37411256-37411296)
chr2 (14-54)||(44860327-44860367)
[»] chr3 (23 HSPs)
chr3 (15-69)||(47362554-47362608)
chr3 (14-54)||(9624648-9624688)
chr3 (14-70)||(11493373-11493429)
chr3 (14-53)||(16192762-16192801)
chr3 (14-70)||(8039847-8039903)
chr3 (21-65)||(35160716-35160760)
chr3 (14-69)||(12703999-12704054)
chr3 (14-53)||(21419467-21419506)
chr3 (18-69)||(41319326-41319377)
chr3 (16-54)||(11251985-11252023)
chr3 (19-53)||(52369783-52369817)
chr3 (13-54)||(10690273-10690314)
chr3 (14-71)||(29112292-29112349)
chr3 (17-90)||(34910288-34910361)
chr3 (14-54)||(7928457-7928497)
chr3 (14-54)||(11313812-11313852)
chr3 (18-50)||(12704056-12704088)
chr3 (17-53)||(17568698-17568734)
chr3 (17-61)||(18180539-18180583)
chr3 (16-102)||(21305203-21305291)
chr3 (14-50)||(27097071-27097107)
chr3 (14-70)||(48202281-48202337)
chr3 (14-54)||(49505166-49505206)
[»] scaffold0085 (1 HSPs)
scaffold0085 (22-70)||(26384-26432)
[»] scaffold0022 (2 HSPs)
scaffold0022 (14-53)||(99901-99940)
scaffold0022 (14-71)||(90833-90890)
[»] chr7 (24 HSPs)
chr7 (14-56)||(5835252-5835294)
chr7 (17-71)||(27945031-27945085)
chr7 (14-71)||(22868032-22868089)
chr7 (14-54)||(7328703-7328743)
chr7 (14-50)||(17307904-17307940)
chr7 (17-60)||(21880153-21880196)
chr7 (14-53)||(38134418-38134457)
chr7 (16-54)||(2424621-2424659)
chr7 (14-52)||(19930953-19930991)
chr7 (16-54)||(29787383-29787421)
chr7 (20-50)||(41360921-41360951)
chr7 (19-53)||(44172907-44172941)
chr7 (14-71)||(6630924-6630981)
chr7 (16-53)||(11700811-11700848)
chr7 (17-54)||(30813819-30813856)
chr7 (18-71)||(32308110-32308163)
chr7 (18-55)||(35861970-35862007)
chr7 (14-71)||(42720902-42720959)
chr7 (17-53)||(7438714-7438750)
chr7 (26-70)||(9933266-9933310)
chr7 (14-54)||(17851438-17851478)
chr7 (14-54)||(19206057-19206097)
chr7 (14-54)||(20549798-20549838)
chr7 (14-54)||(24146823-24146863)
[»] scaffold0011 (1 HSPs)
scaffold0011 (14-53)||(240033-240072)
[»] scaffold0050 (1 HSPs)
scaffold0050 (15-53)||(70286-70324)
[»] scaffold0036 (1 HSPs)
scaffold0036 (14-56)||(9759-9801)
[»] scaffold0007 (1 HSPs)
scaffold0007 (15-53)||(225281-225319)
[»] scaffold0004 (1 HSPs)
scaffold0004 (17-71)||(92797-92851)
[»] scaffold0066 (1 HSPs)
scaffold0066 (17-54)||(33378-33415)
[»] scaffold0044 (1 HSPs)
scaffold0044 (15-52)||(53189-53226)
[»] scaffold0376 (1 HSPs)
scaffold0376 (14-54)||(6319-6359)
[»] scaffold0123 (1 HSPs)
scaffold0123 (14-54)||(44537-44577)
[»] scaffold0037 (1 HSPs)
scaffold0037 (18-62)||(102904-102948)
[»] scaffold0024 (1 HSPs)
scaffold0024 (19-47)||(18125-18153)
[»] scaffold0020 (1 HSPs)
scaffold0020 (14-54)||(135324-135364)
[»] scaffold0008 (1 HSPs)
scaffold0008 (15-71)||(263385-263441)


Alignment Details
Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 15443742 - 15443685
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||    
T  15443742 atataattatattgaattatgttattttctcaaattattattgatgtcgacgtgtcag 15443685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 7265605 - 7265662
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| |||||||||| |||||||||||||||||| | ||||| ||||||||    
T  7265605 atataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcag 7265662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 13851783 - 13851726
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| ||||||| ||||||||||||||||||||| | ||| ||||||||||    
T  13851783 atataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcag 13851726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 30866156 - 30866196
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  30866156 atataattacattgaattatgtgattttctcaaattattag 30866196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 9617481 - 9617442
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  9617481 atataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 13360384 - 13360439
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtc 69  Q
    ||||||||||| |||||||||| |||||||||||||| ||||| ||| ||||||||    
T  13360384 atataattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgtc 13360439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 9629430 - 9629392
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatt 52  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  9629430 atataattacattgaattatgtgattttctcaaattatt 9629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 19040399 - 19040342
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| |||||||||| |||||||||||||||||| | ||| | ||||||||    
T  19040399 atataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcag 19040342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 34073359 - 34073416
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| |||||||||  |||||||||||||||||| ||||||| | ||||||    
T  34073359 atataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcag 34073416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 7378026 - 7377986
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  7378026 atataattacattgaattatgtgattttctcaaatttttag 7377986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 9025506 - 9025546
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  9025506 atataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 33468394 - 33468434
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  33468394 atataattacattgaattaagttattttttcaaattattag 33468434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 5462733 - 5462694
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattatta 5462694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 2140494 - 2140532
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  2140494 tatagttacattgaattatgtcattttctcaaattatta 2140532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 7569181 - 7569219
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  7569181 tataattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 9658927 - 9658869
Alignment:
Q  13 aatataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||||| |||||||||| ||||||| |||||||||| | ||| | ||||||||    
T  9658927 aatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcag 9658869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 10770689 - 10770743
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||| |||||||||| ||||| |||||||||||||  ||||| ||||||||    
T  10770689 taattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcag 10770743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 29049927 - 29049893
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  29049927 attacattgaattatgtaattttctcaaattatta 29049893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 32299321 - 32299283
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  32299321 tataactacattgaattatgtgattttctcaaattatta 32299283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 9024188 - 9024225
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattat 51  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  9024188 atatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 31579239 - 31579276
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 32313451 - 32313394
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||| |||||||| ||||||||||||||| |||||| || ||| | ||||||||    
T  32313451 atataattgcattgaatcatgttattttctcaacttattattggtgtcggcgtgtcag 32313394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 33141295 - 33141266
Alignment:
Q  24 attgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||||||||||||||||    
T  33141295 attgaattatgttattttctcaaattatta 33141266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 1532287 - 1532247
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||| ||||||||||||    
T  1532287 atataattacactgaattatgtaattttatcaaattattag 1532247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 7086842 - 7086802
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| | |||||||| ||||||||||||||||||    
T  7086842 atataattacactaaattatgtgattttctcaaattattag 7086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 7996390 - 7996430
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||| | ||||||||||||||||||    
T  7996390 atataattacactgaattatatgattttctcaaattattag 7996430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 8022411 - 8022371
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||| | ||||||||||||||||||    
T  8022411 atataattacactgaattatatgattttctcaaattattag 8022371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 8931614 - 8931654
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||| | |||||||||||||||||||||||| ||||    
T  8931614 atataattatactgaattatgttattttctcaaatttttag 8931654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 9195766 - 9195806
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| | |||||||| ||||||||||||||||||    
T  9195766 atataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 20371122 - 20371162
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||| ||||||| |||||| ||||||||||||||||||    
T  20371122 atataatcacattgagttatgtgattttctcaaattattag 20371162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 26562736 - 26562696
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||||||||||| ||||    
T  26562736 atataattacactgaattatgtgattttctcaaatttttag 26562696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 33001301 - 33001341
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||||| |||||||| ||||| ||||||||||||    
T  33001301 atataattacatttaattatgtgattttttcaaattattag 33001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 14227263 - 14227212
Alignment:
Q  20 ttacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  14227263 ttacattgaattatgttattttctcaaattattattggtgttgacgtgtcag 14227212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 13203688 - 13203631
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||||||| ||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattagtgttgttgacgtatcag 13203631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 4611581 - 4611541
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  4611581 atataattacactgaattatgttattttctcaaattattag 4611541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 14134746 - 14134670
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcaggtccggtgtccgtgtccgt 90  Q
    ||||||||||| |||||||||| |||||||||||||||||||  ||| |||||||| |   |||||||||| |||||    
T  14134746 atataattacactgaattatgtgattttctcaaattattagtattgtcgacgtgtccgtgtcggtgtccgtatccgt 14134670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 31236589 - 31236629
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  31236589 atataattacattgaattatgtgattttctcaaattattag 31236629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 3508099 - 3508060
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  3508099 atatgattacattgaattatgttattttctcaaattatta 3508060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 7658511 - 7658468
Alignment:
Q  13 aatataattacattgaattatgttattttctcaaattattagtg 56  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  7658511 aatataattacactgaattatgtaattttctcaaattattagtg 7658468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 8798843 - 8798882
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  8798843 atataattatattgaattatgttattttctcaaattatta 8798882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 34201058 - 34201097
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  34201058 atataattacattgaattatgtcattttctcaaattatta 34201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 34897132 - 34897077
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtc 69  Q
    ||||||||||| |||||||||| |||||||||||||||||| | ||| ||||||||    
T  34897132 atataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtc 34897077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 37225755 - 37225794
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  37225755 atatgattacattgaattatgttattttctcaaattatta 37225794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 2648269 - 2648314
Alignment:
Q  23 cattgaattatgttattttctcaaattattagtgatgttgacgtgt 68  Q
    |||| |||||||||||||||||||||||||| || |||||||||||    
T  2648269 catttaattatgttattttctcaaattattattggtgttgacgtgt 2648314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 29447128 - 29447177
Alignment:
Q  20 ttacattgaattatgttattttctcaaattattagtgatgttgacgtgtc 69  Q
    |||||||||||||||| |||||||||||||||||||  ||| ||||||||    
T  29447128 ttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 12606841 - 12606881
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  12606841 atataattacattgaattatatgattttctcaaattattag 12606881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 24017452 - 24017496
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattattagtgatgt 60  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||    
T  24017452 ataattacattgaattatatgattgtctcaaattattagtgatgt 24017496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 3025597 - 3025558
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  3025597 tataattacactgaattatgtgattttctcaaattattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 12985439 - 12985400
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  12985439 atatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 26434224 - 26434181
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgt 60  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||    
T  26434224 taattatattgaattatgtgattttctcaaactattagtgatgt 26434181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 29198491 - 29198530
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  29198491 atatgattacattgaattatgtcattttctcaaattatta 29198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 4786350 - 4786407
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| |||||||||| ||||||| ||||||||| || ||| | ||||||||    
T  4786350 atataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcag 4786407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 18964224 - 18964151
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcaggtccggtgtccgtgtc 87  Q
    |||||||||||||||||||||| ||||||| |||  ||||||  | ||||||||||||   | |||||||||||    
T  18964224 atataattacattgaattatgtgattttctaaaaaaattagttgtcttgacgtgtcagtgtcagtgtccgtgtc 18964151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 9383017 - 9382981
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattatt 52  Q
    ||||||||||||||||||||  |||||||||||||||    
T  9383017 ataattacattgaattatgtagttttctcaaattatt 9382981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 10441245 - 10441213
Alignment:
Q  19 attacattgaattatgttattttctcaaattat 51  Q
    ||||||||||||||||| |||||||||||||||    
T  10441245 attacattgaattatgtcattttctcaaattat 10441213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 13844608 - 13844648
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| | |||||||| ||||||||||||||||||    
T  13844608 atataattacactcaattatgtgattttctcaaattattag 13844648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 14731759 - 14731719
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| | |||||||| ||||||||||||||||||    
T  14731759 atataattacactaaattatgtgattttctcaaattattag 14731719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 20679408 - 20679464
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||| |||| ||||| |||||||||||||||||| | ||| ||| ||||||    
T  20679408 tataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcag 20679464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 20785477 - 20785517
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||||| |||||||| |||| |||||||||||||    
T  20785477 atataattacattaaattatgtgatttcctcaaattattag 20785517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 24362214 - 24362254
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  24362214 atataattacactgaattatgtgattctctcaaattattag 24362254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 27213594 - 27213554
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||||| ||||||||||    
T  27213594 atataattacagtgaattatgtgattttctgaaattattag 27213554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 39954291 - 39954331
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| | |||||||| ||||||||||||||||||    
T  39954291 atataattacactaaattatgtgattttctcaaattattag 39954331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 8420071 - 8419997
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgttgacgtgtca-ggtccggtgtccgtgtccgt 90  Q
    ||||||||||||||||||||||||| ||||||||||||  |||| | |||||||  |||||||||||||||||||    
T  8420071 taattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtccggtgtccgtgtccgt 8419997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 30098372 - 30098301
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag-gtccggtgtccgtg 85  Q
    ||||||||||||||||||||| |||||||||||||||||  | | | | |||||||| ||||||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccggtgtccgtg 30098301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 18607114 - 18607148
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||||||||||||||||||    
T  18607114 attacattgaattatgttattttctcaaattatta 18607148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 3966550 - 3966473
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag-gtccggtgtccgtgtccgt 90  Q
    ||||||||||| |||||| ||| |||||||||||||||||| | ||| | | |||||| |||| ||||||||||||||    
T  3966550 atataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtccagtgtccgtgtccgt 3966473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 22423824 - 22423865
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagt 55  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  22423824 atataattatattgaattatgtgattttctcaaattattagt 22423865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 6471901 - 6471941
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  6471901 atataattacactgaattatgtgattttctcaaattattag 6471941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32444808 - 32444756
Alignment:
Q  19 attacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||||||||| || |||||||||| ||| || ||||||||||||||    
T  32444808 attacattgaattatgtcatcttctcaaattgttaatggtgttgacgtgtcag 32444756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 32630747 - 32630786
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  32630747 atataattacattgaattatataattttctcaaattatta 32630786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 38749575 - 38749614
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  38749575 atataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 6326312 - 6326366
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||| |||||||||| |||||||||||||| ||| ||||| | ||||||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcag 6326366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 11596472 - 11596506
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  11596472 attacattgaattatgtcattttctcaaattatta 11596506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 28588687 - 28588725
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  28588687 tataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 35017084 - 35017042
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtg 56  Q
    ||||||||||| | |||||||| ||||||||||||||||||||    
T  35017084 atataattacactaaattatgtgattttctcaaattattagtg 35017042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 9449510 - 9449477
Alignment:
Q  20 ttacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||| |||||||||||||||||    
T  9449510 ttacattgaattatgtgattttctcaaattatta 9449477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 19438386 - 19438333
Alignment:
Q  18 aattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||| |||||||||| ||||||||||||||| || ||||| || |||||||    
T  19438386 aattacactgaattatgtgattttctcaaattatcagcgatgtcgatgtgtcag 19438333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 27932279 - 27932242
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattag 54  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  27932279 taattacactgaattatgtaattttctcaaattattag 27932242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 31084367 - 31084330
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  31084367 taattacattgaattatgtgattttttcaaattattag 31084330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 5467991 - 5468047
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||| |||||||||| ||||| |||||||||||  | | ||||||||||||    
T  5467991 tataattacactgaattatgtgattttatcaaattattatcggtattgacgtgtcag 5468047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 17593734 - 17593774
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| ||||||| || ||||||||||||||||||    
T  17593734 atataattacactgaattacgtgattttctcaaattattag 17593774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 18592120 - 18592080
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||||||||||||| ||||||| ||| ||||||    
T  18592120 atataattacattgaattatgtaattttcttaaaatattag 18592080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 23012420 - 23012460
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  23012420 atataattacattaaattatatgattttctcaaattattag 23012460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 24273042 - 24273078
Alignment:
Q  14 atataattacattgaattatgttattttctcaaatta 50  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  24273042 atataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 24389172 - 24389136
Alignment:
Q  14 atataattacattgaattatgttattttctcaaatta 50  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  24389172 atataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 28296368 - 28296336
Alignment:
Q  21 tacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||| |||||||||||||||||    
T  28296368 tacattgaattatgtcattttctcaaattatta 28296336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 30502400 - 30502440
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| ||||||| || ||||||||||||||||||    
T  30502400 atataattacactgaattaagtgattttctcaaattattag 30502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 30542743 - 30542783
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| ||||||| || ||||||||||||||||||    
T  30542743 atataattacactgaattaagtgattttctcaaattattag 30542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 31695407 - 31695459
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgt 66  Q
    |||| ||||||||| ||  ||||||||||||||||||||| |||||| |||||    
T  31695407 atatgattacattgtatgttgttattttctcaaattattattgatgtcgacgt 31695459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 32766955 - 32766995
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  32766955 atataattacattgaattgtgcgattttctcaaattattag 32766995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 36838590 - 36838550
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| | |||||||| ||||||||||||||||||    
T  36838590 atataattacactaaattatgtaattttctcaaattattag 36838550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 41091269 - 41091309
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  41091269 atataattacactgaattatgtgattttctcaaatcattag 41091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 41558669 - 41558701
Alignment:
Q  17 taattacattgaattatgttattttctcaaatt 49  Q
    ||||||||||||||||||| |||||||||||||    
T  41558669 taattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 43208286 - 43208322
Alignment:
Q  14 atataattacattgaattatgttattttctcaaatta 50  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  43208286 atatgattacattgaattatgtcattttctcaaatta 43208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 3921709 - 3921659
Alignment:
Q  19 attacattgaattatgttattttctcaaattattagtgatgttgacgtgtc 69  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  3921709 attacattgaattatgtcattttctcaaattattattgatgttgacgtgtc 3921659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 6427397 - 6427340
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||||||||||||||| |||||||||||||||||| | ||||| ||||||||    
T  6427397 atataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcag 6427340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 7918223 - 7918269
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgt 60  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  7918223 atataattacactgaattatgtgattttctcaaattattagtgatgt 7918269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 40747786 - 40747824
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  40747786 tataattacattgaattatgtcattttctcaaattatta 40747824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 34298482 - 34298441
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtg 56  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtg 34298441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 9033021 - 9033077
Alignment:
Q  16 ataattacattgaattatgttattttct-caaattattagtgatgttgacgtgtcag 71  Q
    ||||||||| |||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  9033021 ataattacactgaattatgtgatttttttcaaattattagtggtgttgacgtgtcag 9033077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 9828087 - 9828019
Alignment:
Q  18 aattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcaggtccggtgtccgtgt 86  Q
    ||||||| |||||||||| ||||| |||||||||||||| ||| | ||||||  |||||||||| ||||    
T  9828087 aattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtcgtgtccggtgtctgtgt 9828019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 10233300 - 10233252
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttg 62  Q
    ||||||||||| |||||||||| |||||||||| ||||||||| |||||    
T  10233300 atataattacactgaattatgtgattttctcaatttattagtggtgttg 10233252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 21057825 - 21057773
Alignment:
Q  19 attacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||| |||||||||||||||| |||||||||| | ||| ||||||||||    
T  21057825 attacattcaattatgttattttctaaaattattagcggtgtcgacgtgtcag 21057773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 34712395 - 34712435
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  34712395 atataattacactaaattatgttattttctcaaattattag 34712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 36878507 - 36878451
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||| |||||||||| |||||||||||||||||| | ||| | ||||||||    
T  36878507 tataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcag 36878451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 40181918 - 40181878
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  40181918 atataattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 41017416 - 41017472
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtca 70  Q
    ||||||||||||| |||||||| ||||||||||||||||| |   ||||||||||||    
T  41017416 atataattacattaaattatgtcattttctcaaattattactagggttgacgtgtca 41017472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 46914052 - 46914084
Alignment:
Q  15 tataattacattgaattatgttattttctcaaa 47  Q
    |||||||||||||||||||||||||||||||||    
T  46914052 tataattacattgaattatgttattttctcaaa 46914084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 1864892 - 1864931
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  1864892 atataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 17425105 - 17425144
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  17425105 atataattacattgaattatgtgattttatcaaattatta 17425144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 26238129 - 26238164
Alignment:
Q  19 attacattgaattatgttattttctcaaattattag 54  Q
    |||||| |||||||||||||||||||||||||||||    
T  26238129 attacactgaattatgttattttctcaaattattag 26238164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 609481 - 609527
Alignment:
Q  25 ttgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  609481 ttgaattatgtaattttctcaaattattagtggtgtcggcgtgtcag 609527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 10572604 - 10572658
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||  ||||||||| |||||||||||||||||||| ||| | ||||||||    
T  10572604 taattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcag 10572658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 11571627 - 11571593
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  11571627 attacattgaattatgtcattttctcaaattatta 11571593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 14332654 - 14332696
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtg 56  Q
    ||||||||||| | |||||||| ||||||||||||||||||||    
T  14332654 atataattacactaaattatgtgattttctcaaattattagtg 14332696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 17080898 - 17080932
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    |||||||| ||||||||||||||||||||||||||    
T  17080898 attacattcaattatgttattttctcaaattatta 17080932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 24176380 - 24176418
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  24176380 tataattacactgaatgatgttattttctcaaattatta 24176418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 25361933 - 25361891
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtg 56  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||    
T  25361933 atataattacactgaattatgtgattttctcaaattatcagtg 25361891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 38078676 - 38078730
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||||||||||| ||||| ||||||||||||   ||| ||||||||||    
T  38078676 taattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcag 38078730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 39101195 - 39101233
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  39101195 tataattacacttaattatgttattttctcaaattatta 39101233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 43492508 - 43492582
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcaggtccggtgtccgtgtccgt 90  Q
    |||||||||  |||||| || |||||||||||||| ||||| ||| | ||||||  |||||||||| ||||||||    
T  43492508 ataattacaccgaattacgtgattttctcaaattactagtggtgtcggcgtgtcgtgtccggtgtctgtgtccgt 43492582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 43609835 - 43609869
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    |||||||| ||||||||||||||||||||||||||    
T  43609835 attacattcaattatgttattttctcaaattatta 43609869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 43942366 - 43942332
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||||||||||||| ||||    
T  43942366 attacattgaattatgttattttctcaaatcatta 43942332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 1262928 - 1262891
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattag 54  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattag 1262891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 2288181 - 2288218
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  2288181 ataattacattgaattatgtgattttcttaaattatta 2288218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 2445917 - 2445860
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||| |||| |||||||||||| ||||||||||||||| | || |||||| |||||||    
T  2445917 atatgattaaattgaattatgtcattttctcaaattatcattggtgttgaagtgtcag 2445860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 5376515 - 5376552
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattag 54  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  5376515 taattacactgaattatgttattttcttaaattattag 5376552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 19324609 - 19324572
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattat 51  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  19324609 atataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 25098567 - 25098604
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattat 51  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  25098567 atataattacactgaattatgtgattttctcaaattat 25098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 31015087 - 31015050
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattag 54  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  31015087 taattacactgaattatgtgattttctcaaattattag 31015050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 44482277 - 44482240
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattat 51  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  44482277 atataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 53
Target Start/End: Original strand, 48785286 - 48785315
Alignment:
Q  24 attgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||||||||||||||||    
T  48785286 attgaattatgttattttctcaaattatta 48785315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 398778 - 398834
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||| |||||||||| ||||| |||||||||||| | ||| | ||||||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcag 398834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 9709867 - 9709827
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||  ||||||||| ||||||||||||||||||    
T  9709867 atataattacaacgaattatgtgattttctcaaattattag 9709827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 10799712 - 10799680
Alignment:
Q  19 attacattgaattatgttattttctcaaattat 51  Q
    |||||||| ||||||||||||||||||||||||    
T  10799712 attacattaaattatgttattttctcaaattat 10799680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 12443476 - 12443512
Alignment:
Q  18 aattacattgaattatgttattttctcaaattattag 54  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattag 12443512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 30847732 - 30847772
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||| ||||||||||||||||| ||||| ||||||||||||    
T  30847732 atatgattacattgaattatgtcattttttcaaattattag 30847772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 36635371 - 36635314
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||    
T  36635371 atataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcag 36635314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 19230322 - 19230360
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19230322 tataattacattgaattatgttattttctcaaattatta 19230360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 32273550 - 32273612
Alignment:
Q  26 tgaattatgttattttctcaaattattagtgatgttgacgtgtcaggtccggtgtccgtgtcc 88  Q
    |||||||||||||||| |||||||||||||  ||||| ||||||| |||||||||| ||||||    
T  32273550 tgaattatgttattttttcaaattattagttgtgttggcgtgtcatgtccggtgtctgtgtcc 32273612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 7214534 - 7214583
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttga 63  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  7214534 atataattacattaaattatgtgattttctcaaattattagtggtgttga 7214583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 44796977 - 44797012
Alignment:
Q  17 taattacattgaattatgttattttctcaaattatt 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  44796977 taattacattgaattatgttattttctcaaattatt 44797012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 35723396 - 35723454
Alignment:
Q  14 atataattacattgaattatgt-tattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||||||||||||||| ||||||||||||||||||| | ||| | ||||||||    
T  35723396 atataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcag 35723454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 21345550 - 21345599
Alignment:
Q  19 attacattgaattatgttattttctcaaattattagtgatgttgacgtgt 68  Q
    |||||||||| |||||||||||| ||||||||||| || |||||||||||    
T  21345550 attacattgagttatgttattttttcaaattattattggtgttgacgtgt 21345599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 24613719 - 24613768
Alignment:
Q  20 ttacattgaattatgttattttctcaaattattagtgatgttgacgtgtc 69  Q
    |||||||||||||||| |||||||||||||||||||  ||| ||||||||    
T  24613719 ttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 8820446 - 8820398
Alignment:
Q  23 cattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||||| ||||| |||||||||||  ||||||||||||||||    
T  8820446 cattgaattatgtgattttatcaaattattatcgatgttgacgtgtcag 8820398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 43300664 - 43300624
Alignment:
Q  13 aatataattacattgaattatgttattttctcaaattatta 53  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  43300664 aatatgattacattgaattatgtaattttctcaaattatta 43300624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 903969 - 903930
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  903969 atataattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 2234295 - 2234260
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattat 51  Q
    |||||||||||||||||||| |||||||||||||||    
T  2234295 ataattacattgaattatgtgattttctcaaattat 2234260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 5177031 - 5176992
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  5177031 atattattacattgaattatgttattttctcaaaatatta 5176992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 8423731 - 8423770
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattag 8423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 18513253 - 18513292
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  18513253 atatgattacattgaattatgtcattttctcaaattatta 18513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 22440612 - 22440651
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  22440612 atataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 26276023 - 26276058
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattat 51  Q
    |||||||||||||||||||| |||||||||||||||    
T  26276023 ataattacattgaattatgtcattttctcaaattat 26276058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 43299983 - 43300022
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  43299983 atatgattacattgaattatgtaattttctcaaattatta 43300022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 5654608 - 5654642
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  5654608 attacattgaattatgtcattttctcaaattatta 5654642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 10546190 - 10546156
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  10546190 attacattgaattatgtcattttctcaaattatta 10546156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 24343553 - 24343515
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  24343553 tataattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 37698759 - 37698713
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgt 60  Q
    ||||||||||| |||||||| | |||||||||||||||||| |||||    
T  37698759 atataattacactgaattatataattttctcaaattattagagatgt 37698713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 46180948 - 46180986
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatt 52  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  46180948 atatgattacactgaattatgttattttctcaaattatt 46180986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 12077869 - 12077836
Alignment:
Q  20 ttacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||| |||||||||||||||||    
T  12077869 ttacattgaattatgtgattttctcaaattatta 12077836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 14465090 - 14465127
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  14465090 taattacattgaattatgtgattttttcaaattattag 14465127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 32910596 - 32910559
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  32910596 ataattacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 33950183 - 33950126
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||| |||||||| |||||||| |||||||||||||||||| |  ||||| |||||||    
T  33950183 atatgattacattaaattatgtgattttctcaaattattagcggcgttgaagtgtcag 33950126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 680005 - 680057
Alignment:
Q  19 attacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||||||||||| ||||||||||| |||| || ||  ||||||||||    
T  680005 attacattgaattatgtttttttctcaaataattactggtgccgacgtgtcag 680057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 3712521 - 3712561
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||||||||||  | ||||||||||||||||||    
T  3712521 atataattacattgaattacatgattttctcaaattattag 3712561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 23915173 - 23915137
Alignment:
Q  17 taattacattgaattatgttattttctcaaattatta 53  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  23915173 taattatattgaattatgttattttctcaaatgatta 23915137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 35952629 - 35952669
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||||||||||| | ||||| ||||||||||||    
T  35952629 atataattacattgaattatatgattttatcaaattattag 35952669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 40613497 - 40613457
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||||||||| ||||||    
T  40613497 atataattacactgaattatgtgattttctcaaaatattag 40613457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 54580036 - 54580076
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagt 55  Q
    |||||||||| |||||||||| ||||| |||||||||||||    
T  54580036 tataattacactgaattatgtgattttttcaaattattagt 54580076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 44605154 - 44605207
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgttgacgtgtca 70  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  44605154 taattacattgaattatgttattttctcaaattattattggcgttgacgtgtca 44605207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 19613625 - 19613664
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  19613625 atatcattacattgaattatgttattttctcaaattatta 19613664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 12668436 - 12668492
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||| |||||||||| ||||| ||||||||||||| |||| | ||||||||    
T  12668436 tataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcag 12668492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 18420447 - 18420503
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||| ||||||||||||| ||||||||||||||||||   ||||| ||||||||    
T  18420447 tataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcag 18420503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 21616809 - 21616769
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  21616809 atataattacactgaattatgtgattttctcaaattattag 21616769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 36756357 - 36756413
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||| |||||||||||||||  |||||||||||||  ||| ||||||||||    
T  36756357 tataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcag 36756413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 18571019 - 18570980
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  18571019 atatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 40682025 - 40681990
Alignment:
Q  18 aattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||| |||||||||||||||||    
T  40682025 aattacattgaattatgtcattttctcaaattatta 40681990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 2073979 - 2073941
Alignment:
Q  24 attgaattatgttattttctcaaattattagtgatgttg 62  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  2073979 attgaattatgttattttctcaaattattatcgatgttg 2073941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 5367239 - 5367197
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtg 56  Q
    ||||||||||| |||||||||| |||| |||||||||||||||    
T  5367239 atataattacactgaattatgtgatttcctcaaattattagtg 5367197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 10250768 - 10250734
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||| |||||||||||||||||||||    
T  10250768 attacattgaattgtgttattttctcaaattatta 10250734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 19574024 - 19573986
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  19574024 tataattacactgaattatgttattttcttaaattatta 19573986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 21782832 - 21782870
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattag 21782870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 23921299 - 23921261
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  23921299 tataattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 30563455 - 30563417
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  30563455 tatagttacattgaattatgtcattttctcaaattatta 30563417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 4332971 - 4332934
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  4332971 ataattacattgaattatgtgattttcccaaattatta 4332934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 25846787 - 25846746
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtg 56  Q
    |||||||||| ||||| |||| ||||||||||||||||||||    
T  25846787 tataattacactgaatcatgtgattttctcaaattattagtg 25846746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 12933751 - 12933787
Alignment:
Q  17 taattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  12933751 taattacattgaattatgtcattttcttaaattatta 12933787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 23718073 - 23718033
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| | ||||||||||||||||    
T  23718073 atataattacactgaattatgtgactttctcaaattattag 23718033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 24105745 - 24105705
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| | ||||||||||||||||    
T  24105745 atataattacactgaattatgtgactttctcaaattattag 24105705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 28412395 - 28412343
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattattagtgatgttgacgtgt 68  Q
    ||||||||| |||||||||| ||||| |||||||||||  | |||||||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgt 28412343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 28677956 - 28677916
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||| ||||||||||||    
T  28677956 atataattacactgaattatgtgattttttcaaattattag 28677916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 30471085 - 30471045
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||| ||||||||| ||||||||||| ||||||    
T  30471085 atataattacatcgaattatgtgattttctcaaaatattag 30471045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 37411256 - 37411296
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||| ||| |||||||||| ||||||||||||||||||    
T  37411256 atataatcacactgaattatgtgattttctcaaattattag 37411296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 44860367 - 44860327
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||  ||||||||||||||||||    
T  44860367 atataattacactgaattatgcgattttctcaaattattag 44860327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 47362608 - 47362554
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtc 69  Q
    |||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  47362608 tataattacattcaattatgtaattttcttaaattattactgatgttgacgtgtc 47362554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 9624688 - 9624648
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  9624688 atataattacattgaattatgtgattttctcaaattattag 9624648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 11493373 - 11493429
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtca 70  Q
    ||||||||||| |||||||||| ||||||||| |||||||||| ||| |||||||||    
T  11493373 atataattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtca 11493429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 16192762 - 16192801
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  16192762 atataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 8039847 - 8039903
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtca 70  Q
    ||||||||||| |||||||| | |||||||||||||||||| | ||||| |||||||    
T  8039847 atataattacactgaattatataattttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 35160760 - 35160716
Alignment:
Q  21 tacattgaattatgttattttctcaaattattagtgatgttgacg 65  Q
    |||||||||||||||||||| |||||||||||| || ||||||||    
T  35160760 tacattgaattatgttatttactcaaattattattgctgttgacg 35160716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 12704054 - 12703999
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtc 69  Q
    ||||||||||| ||||||||||  ||||||||||||||||||| ||| | ||||||    
T  12704054 atataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 21419467 - 21419506
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  21419467 atataattacattgaattatattattttcttaaattatta 21419506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 41319326 - 41319377
Alignment:
Q  18 aattacattgaattatgttattttctcaaattattagtgatgttgacgtgtc 69  Q
    |||||||||||||||||| ||||| ||||||||||| || ||| ||||||||    
T  41319326 aattacattgaattatgtcattttttcaaattattattggtgtcgacgtgtc 41319377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 11252023 - 11251985
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  11252023 ataattacactgaattatgtgattttctcaaattattag 11251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 52369817 - 52369783
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  52369817 attacattgaattatgtaattttctcaaattatta 52369783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 10690273 - 10690314
Alignment:
Q  13 aatataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||| |||||||||| ||||||||| ||||||||    
T  10690273 aatataattacactgaattatgtgattttctcagattattag 10690314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 29112292 - 29112349
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| |||||||| | |||||||||||| ||||||| |||  |||||||||    
T  29112292 atataattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcag 29112349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 34910361 - 34910288
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcaggtccggtgtccgtgtccgt 90  Q
    |||||||| |||||||||| ||||| |||||||||||||  ||| | ||||||  ||| ||||||||| |||||    
T  34910361 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcgtgtctggtgtccgtatccgt 34910288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 7928497 - 7928457
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||| ||||||||||||    
T  7928497 atataattacactgaattatgtgattttttcaaattattag 7928457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 11313812 - 11313852
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| | |||||||| ||||||||||||||||||    
T  11313812 atataattacactaaattatgtgattttctcaaattattag 11313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 12704088 - 12704056
Alignment:
Q  18 aattacattgaattatgttattttctcaaatta 50  Q
    |||||||||||||||||| ||||||||||||||    
T  12704088 aattacattgaattatgtgattttctcaaatta 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 17568698 - 17568734
Alignment:
Q  17 taattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||| |||||||| |||||||||||||||||    
T  17568698 taattacattaaattatgtaattttctcaaattatta 17568734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 18180583 - 18180539
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgtt 61  Q
    |||||||||| |||||| | ||||||||||||||||| |||||||    
T  18180583 taattacatttaattatttcattttctcaaattattattgatgtt 18180539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 21305291 - 21305203
Alignment:
Q  16 ataattacattgaattatgttattttct-caaattattagtgatgttgacgtgtcag-gtccggtgtccgtgtccgtttttatgcttca 102  Q
    ||||||||||| |||||||| ||||| | ||||||||||| | ||| | ||||| || ||| |||||||||||| || |||||||||||    
T  21305291 ataattacatttaattatgtgatttttttcaaattattagaggtgtcggcgtgttagtgtctggtgtccgtgtctgtatttatgcttca 21305203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 27097071 - 27097107
Alignment:
Q  14 atataattacattgaattatgttattttctcaaatta 50  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  27097071 atataattaaattgaattatgtaattttctcaaatta 27097107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 48202281 - 48202337
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtca 70  Q
    ||||||||||||| |||||||| ||||||||||| |||||  ||||| | |||||||    
T  48202281 atataattacattaaattatgtgattttctcaaactattatggatgtcggcgtgtca 48202337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 49505166 - 49505206
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| | |||||||| ||||||||||||||||||    
T  49505166 atataattacactaaattatgtgattttctcaaattattag 49505206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 26432 - 26384
Alignment:
Q  22 acattgaattatgttattttctcaaattattagtgatgttgacgtgtca 70  Q
    |||||||||||||| |||||||||||||||||||| ||| |||||||||    
T  26432 acattgaattatgtgattttctcaaattattagtggtgtcgacgtgtca 26384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 99940 - 99901
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  99940 atataattacattgaattatgttattttctaaaattatta 99901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 90890 - 90833
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| |||||||| | ||||||||||||||||| || |||||  |||||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcag 90833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000009; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 5835294 - 5835252
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtg 56  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  5835294 atataattacactgaattatgttattttctcaaactattagtg 5835252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 27945085 - 27945031
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||| |||||||||| |||||||||||||||||||| ||| | ||||||||    
T  27945085 taattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcag 27945031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 22868089 - 22868032
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| |||||||||| ||||||||| |||||||||| ||| | ||||||||    
T  22868089 atataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcag 22868032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 7328703 - 7328743
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  7328703 atataattacactaaattatgttattttctcaaattattag 7328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 17307940 - 17307904
Alignment:
Q  14 atataattacattgaattatgttattttctcaaatta 50  Q
    ||||||||||| |||||||||||||||||||||||||    
T  17307940 atataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 21880196 - 21880153
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgt 60  Q
    |||||||| |||||||||| |||||||||||||||||| |||||    
T  21880196 taattacactgaattatgtaattttctcaaattattagcgatgt 21880153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 38134418 - 38134457
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  38134418 atatgattacattgaattatgtcattttctcaaattatta 38134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 2424659 - 2424621
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattag 2424621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 19930953 - 19930991
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatt 52  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  19930953 atataattacattgaattatgtcattttatcaaattatt 19930991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 29787383 - 29787421
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattag 29787421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 41360951 - 41360921
Alignment:
Q  20 ttacattgaattatgttattttctcaaatta 50  Q
    |||||||||||||||||||||||||||||||    
T  41360951 ttacattgaattatgttattttctcaaatta 41360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 44172907 - 44172941
Alignment:
Q  19 attacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  44172907 attacattgaattatgtcattttctcaaattatta 44172941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 6630924 - 6630981
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||| ||||||| || | |||||||||||||||||| ||| | ||||||||    
T  6630924 atataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcag 6630981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 11700848 - 11700811
Alignment:
Q  16 ataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  11700848 ataattacattgaattatgtgattttgtcaaattatta 11700811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 30813856 - 30813819
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattag 54  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  30813856 taattacactgaattatgtaattttctcaaattattag 30813819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 32308163 - 32308110
Alignment:
Q  18 aattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||| |||||||||| |||||||||||||||||| | ||| | ||||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcag 32308110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 35862007 - 35861970
Alignment:
Q  18 aattacattgaattatgttattttctcaaattattagt 55  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  35862007 aattacattgaattatgtgattttttcaaattattagt 35861970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 42720902 - 42720959
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    ||||||||||||| |||||||| ||||| |||||||||||| | |||  |||||||||    
T  42720902 atataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcag 42720959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 7438750 - 7438714
Alignment:
Q  17 taattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  7438750 taattacattgaattatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 9933310 - 9933266
Alignment:
Q  26 tgaattatgttattttctcaaattattagtgatgttgacgtgtca 70  Q
    |||| ||||| ||||| ||||||||||||| ||||||||||||||    
T  9933310 tgaaatatgtgattttttcaaattattagtaatgttgacgtgtca 9933266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 17851478 - 17851438
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||||| ||||||||||    
T  17851478 atataattacactgaattatgtgattttctaaaattattag 17851438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 19206097 - 19206057
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||| | |||||||||| ||||||||||||||||||    
T  19206097 atataattataatgaattatgtgattttctcaaattattag 19206057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 20549838 - 20549798
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| ||||||| || ||||||||||||||||||    
T  20549838 atataattacactgaattacgtgattttctcaaattattag 20549798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 24146863 - 24146823
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||| |||||||||||| ||||||| ||||||||||    
T  24146863 atataattatattgaattatgtgattttctaaaattattag 24146823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 240033 - 240072
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattatta 53  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  240033 atatgattacattgaattatattattttctcaaattatta 240072  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 70324 - 70286
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  70324 tataattacactgaattatgttattttttcaaattatta 70286  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 9759 - 9801
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattagtg 56  Q
    ||||||||||| ||||||| || ||||||||||||||||||||    
T  9759 atataattacactgaattaagtgattttctcaaattattagtg 9801  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 225281 - 225319
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatta 53  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  225281 tataattacattgtattatgtcattttctcaaattatta 225319  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 92851 - 92797
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||| |||||||||| |||||||||||||||||| | ||| | ||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcag 92797  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 33378 - 33415
Alignment:
Q  17 taattacattgaattatgttattttctcaaattattag 54  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  33378 taattacactgaattatgttattttttcaaattattag 33415  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 53226 - 53189
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattatt 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  53226 tataattacactgaattatgtgattttctcaaattatt 53189  T

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Target: scaffold0376 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 6359 - 6319
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||||||||||||  ||||| ||||||||||||    
T  6359 atataattacattgaattatgcaattttgtcaaattattag 6319  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 44537 - 44577
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    ||||||||||| |||||||||| ||||||||||||| ||||    
T  44537 atataattacactgaattatgtgattttctcaaatttttag 44577  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 102948 - 102904
Alignment:
Q  18 aattacattgaattatgttattttctcaaattattagtgatgttg 62  Q
    |||||||||||||||| | |||||||||||||||||  |||||||    
T  102948 aattacattgaattatatcattttctcaaattattatcgatgttg 102904  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 18125 - 18153
Alignment:
Q  19 attacattgaattatgttattttctcaaa 47  Q
    |||||||||||||||||||||||||||||    
T  18125 attacattgaattatgttattttctcaaa 18153  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 135324 - 135364
Alignment:
Q  14 atataattacattgaattatgttattttctcaaattattag 54  Q
    |||||||||||  ||||||||| ||||||||||||||||||    
T  135324 atataattacacagaattatgtgattttctcaaattattag 135364  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 263385 - 263441
Alignment:
Q  15 tataattacattgaattatgttattttctcaaattattagtgatgttgacgtgtcag 71  Q
    |||||||||| ||||||||||  |||||||||||||||||   ||||||| ||||||    
T  263385 tataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcag 263441  T

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