View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16274_low_6 (Length: 352)
Name: NF16274_low_6
Description: NF16274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16274_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 19 - 341
Target Start/End: Complemental strand, 28818304 - 28817965
Alignment:
| Q |
19 |
gtaataataggttactattcacaaaaaatcatcatggtggttctaacaatgctataaattcaaggaggactttggatagcatgtaaacgtggcattttgc |
118 |
Q |
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| T |
28818304 |
gtaataataggttactattcacaaaaaatcataatggtggttctaacaatgctataaattcaaggaggactttggatagcatgtaaacgtggcattttgc |
28818205 |
T |
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| Q |
119 |
ttttgtatgagccaagagattccactatttttggcagtcaagtcactcactttgttatattatatatccaaaacttactaacatgtttgtgaacattact |
218 |
Q |
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| T |
28818204 |
ttttgtatgagccaagagattccactatttttggctgtcaagtcactcactttgttatattatatatcgaaaacttactaacatgtttgtgaacattact |
28818105 |
T |
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| Q |
219 |
actttcatttgtcactagac-----------------tttttcaaacaaaattgttctccactgagctctggtccttcaaaattctagctgcatgaagca |
301 |
Q |
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|||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28818104 |
actttcatttgtcactagactttccatatttgtcacttttttcaaacaaaatttttctccactgagctctggtccttcaaaattctagctgcatgaagca |
28818005 |
T |
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| Q |
302 |
tcgaagaaaatgagttacaatgatggaatattatcttcat |
341 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
28818004 |
tcgaagaaaatgagttacaatgatggaatattatcttcat |
28817965 |
T |
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