View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16275_low_4 (Length: 452)
Name: NF16275_low_4
Description: NF16275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16275_low_4 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 292; Significance: 1e-164; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 17 - 392
Target Start/End: Complemental strand, 225202 - 224827
Alignment:
| Q |
17 |
actgatgagttgttttataatcaattaaacaagtgataataactgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttg |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
225202 |
actgatgagttgttttataatcaattaaacaagtgataataactgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttg |
225103 |
T |
 |
| Q |
117 |
ctacaattactgtaccggatggtcttacttggaaattggaattgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaata |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
225102 |
ctacaattactgtaccggatggtcttacttggaaattggaattgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacaatttgcagaata |
225003 |
T |
 |
| Q |
217 |
ctattctttaagatacggttgcttcatgtctttcaaatatgaagggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaagttcctat |
316 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | || |||| |
|
|
| T |
225002 |
ctattctttaagatatggttgcttcatgtctttcaaatatgaagggaattcaaagtttagtgttattatatttgatgtaacttctgttgagatttgctat |
224903 |
T |
 |
| Q |
317 |
cctttcgaaacttcaagaactaatggagaaccaaaaacaaattatcctagttctagaaaaaggtccaaggttgaaa |
392 |
Q |
| |
|
|| || ||||| |||| |||||||||||| |||| ||| | | |||||| ||| |||||||||| |||||||| |
|
|
| T |
224902 |
ccactcaaaactccaagtactaatggagaaacaaacacagagtgtcctagacctacgaaaaggtccagggttgaaa |
224827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 17 - 447
Target Start/End: Complemental strand, 210723 - 210290
Alignment:
| Q |
17 |
actgatgagttgttttataatcaattaaacaagtgataataactgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttg |
116 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| | ||||| |||||| ||||||||| |
|
|
| T |
210723 |
actgatgagttattttataatcaattaaacaagtgatgataactgcagagaattccagaaaactttataacaatgtttgggaatgaactcgagaatgttg |
210624 |
T |
 |
| Q |
117 |
ctacaattactgtaccggatggtcttacttggaaattggaattgaagaaacgtggggaggatgtttacttttgcaacaa---atggaaacagtttgcaga |
213 |
Q |
| |
|
||||| ||||||| || |||||| | |||| || |||| ||||||||| |||| ||||||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
210623 |
ctacagttactgttcccgatggttgtgattgggaaatggacttgaagaaatgtggcgaggatgtttacttttgcaacaaggaatggcaacagtttgcaga |
210524 |
T |
 |
| Q |
214 |
atactattctttaagatacggttgcttcatgtctttcaaatatgaagggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaagttcc |
313 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || | |
|
|
| T |
210523 |
atactattctttaagatacggttgcttcctgtctttcagatacgaagggaattcaaattttagcgttattatatttgatgcaacttctgttgaaatttgc |
210424 |
T |
 |
| Q |
314 |
tatcctttcgaaacttcaagaactaatggagaaccaaaaacaaattatcctagttctagaaaaaggtccaaggttgaaacatgtgagaggcttcggaaaa |
413 |
Q |
| |
|
||||| || ||||| |||| |||| ||||||| |||| || | | |||||| ||| ||||||||||||||||||||| ||||||| | |||||| |
|
|
| T |
210423 |
tatccattaaaaactccaagtactagtggagaaacaaacaccgagtgtcctaggcctatgaaaaggtccaaggttgaaacaagtgagagtccagggaaaa |
210324 |
T |
 |
| Q |
414 |
aggtcaaaaacatgtctaaatatgcttctaaaag |
447 |
Q |
| |
|
||||||||| ||||||||| ||||||| |||||| |
|
|
| T |
210323 |
aggtcaaaagcatgtctaattatgcttataaaag |
210290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 58 - 399
Target Start/End: Complemental strand, 217282 - 216941
Alignment:
| Q |
58 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
157 |
Q |
| |
|
|||| |||||||||| || | ||||||| || || ||||| ||||||||||||||||||||||||||||| || |||||| | |||| || || || |
|
|
| T |
217282 |
actgtagagaattccagatgaatttataaaaagatttgggaatgaactcaagaatgttgctacaattactgttcccgatggttgtgattgggaaatgaaa |
217183 |
T |
 |
| Q |
158 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
257 |
Q |
| |
|
|||||||| | || | || ||||||||||||||||||||| ||||||||||||||||||||||| || | || |||| |||| ||| ||||||||||| |
|
|
| T |
217182 |
ctgaagaaatgcggcaatgacgtttacttttgcaacaaatggcaacagtttgcagaatactattctatagggtatggttccttcctgtgtttcaaatatg |
217083 |
T |
 |
| Q |
258 |
aagggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaagttcctatcctttcgaaacttcaagaactaatggagaaccaaaaacaaa |
357 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||||||| |||| | || |||||| ||| ||||| ||| || ||||||||| |||||||||| |
|
|
| T |
217082 |
aaggggattcaaagtttagtgtctttatatttgatgcaacttctattgagatttgctatccattcaaaactcaaagtacaaatggagaaacaaaaacaaa |
216983 |
T |
 |
| Q |
358 |
ttatcctagttctagaaaaaggtccaaggttgaaacatgtga |
399 |
Q |
| |
|
| || |||| |||| ||||||||||||||||||||| |||| |
|
|
| T |
216982 |
gtttcatagtcctaggaaaaggtccaaggttgaaacaagtga |
216941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 58 - 399
Target Start/End: Complemental strand, 222227 - 221886
Alignment:
| Q |
58 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
157 |
Q |
| |
|
||||||||||||||| || | ||||||| || || ||||| ||||||||||||||||||||||||||||| || ||||| | |||| || ||||| |
|
|
| T |
222227 |
actgcagagaattccagatggatttataaaaagatttgggaatgaactcaagaatgttgctacaattactgttcccgatggctgtgattgggaaatggaa |
222128 |
T |
 |
| Q |
158 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
257 |
Q |
| |
|
|||||||| | || | || ||||||||||||||||||||| ||||||||||||||||||||||| || | || |||| |||| || ||||||||||| |
|
|
| T |
222127 |
ctgaagaaatgcggcaacgacgtttacttttgcaacaaatggcaacagtttgcagaatactattctatagggtatggttccttcttgcgtttcaaatatg |
222028 |
T |
 |
| Q |
258 |
aagggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaagttcctatcctttcgaaacttcaagaactaatggagaaccaaaaacaaa |
357 |
Q |
| |
|
||||| |||||||||||| |||| |||||||||||| |||||||||||| | || |||||| ||| ||||| ||| | |||||||||| |||| ||||| |
|
|
| T |
222027 |
aaggggattcaaagtttaatgttgttatatttgatgtaacttctgttgagatttgctatccattcaaaactcaaagtattaatggagaaacaaacacaaa |
221928 |
T |
 |
| Q |
358 |
ttatcctagttctagaaaaaggtccaaggttgaaacatgtga |
399 |
Q |
| |
|
| || |||| |||| ||||||||||||||||||||| |||| |
|
|
| T |
221927 |
gtgtcatagtcctaggaaaaggtccaaggttgaaacaagtga |
221886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 58 - 449
Target Start/End: Complemental strand, 197404 - 197013
Alignment:
| Q |
58 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
157 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| | ||||| |||||| |||| ||||||||| |||| || || ||||||| | ||||||| || | |
|
|
| T |
197404 |
actgcagagaattcctgaagactttataacaatgtttgggaatgaactcgagaaagttgctacagttacagttcccgatggtcgtgattggaaaatgaga |
197305 |
T |
 |
| Q |
158 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
257 |
Q |
| |
|
||||||||||| || | || ||| ||||| |||| ||||| || |||| ||| |||||||||| ||| | || ||||||| | | ||||||||||| | |
|
|
| T |
197304 |
ttgaagaaacgcggcaatgacattttcttttccaacgaatgggaagagttcgcaaaatactattcattagggtatggttgctacctatctttcaaatacg |
197205 |
T |
 |
| Q |
258 |
aagggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaagttcctatcctttcgaaacttcaagaactaatggagaaccaaaaacaaa |
357 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||| |||||| | || ||||| || ||||| |||| ||||||||||||||| ||||| |
|
|
| T |
197204 |
aagggaattcaaagtttagtgttattatatttgacgtaacttatgttgagatttgttatccattaaaaactccaagtgttaatggagaaccaaacacaaa |
197105 |
T |
 |
| Q |
358 |
ttatcctagttctagaaaaaggtccaaggttgaaacatgtgagaggcttcggaaaaaggtcaaaaacatgtctaaatatgcttctaaaagag |
449 |
Q |
| |
|
| | ||||| ||| ||||||||||||||||||||| ||||| | | | ||||||||| ||||| | |||||||| ||||||||| ||||| |
|
|
| T |
197104 |
atgtgctagtcctacgaaaaggtccaaggttgaaacaagtgagtgtcatgggaaaaaggccaaaagcgtgtctaaacatgcttctacaagag |
197013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 394
Target Start/End: Original strand, 204789 - 205125
Alignment:
| Q |
58 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
157 |
Q |
| |
|
||||||||||||| | || | |||||||||| || ||||| ||||||||||||||||||||| |||||| | ||||||| | ||||| | || | |
|
|
| T |
204789 |
actgcagagaatttcagatgagtttataacaagatttgggatagaactcaagaatgttgctacagttactgctactgatggtcgtgattggagaatgaga |
204888 |
T |
 |
| Q |
158 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
257 |
Q |
| |
|
|||||||||| || | || ||| ||||| |||| ||||| || |||||||| |||||||||| ||| ||| ||||||| | | ||||||||||| | |
|
|
| T |
204889 |
ttgaagaaacacggcaatgacattttcttttacaacgaatggcaagagtttgcaaaatactattcgttaggatgtggttgctacctatctttcaaatacg |
204988 |
T |
 |
| Q |
258 |
aagggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaagttcctatcctttcgaaacttcaagaactaatggagaaccaaaaacaaa |
357 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||| |||||| ||||| | || |||||| || ||||| | || |||||||||||| |||| ||| | |
|
|
| T |
204989 |
aaggaaattcaaagtttagtgttgttatatttgatgtaacttcggttgagatttgctatccactcaaaactccgagtactaatggagaaacaaatacaca |
205088 |
T |
 |
| Q |
358 |
ttatcctagttctagaaaaaggtccaaggttgaaaca |
394 |
Q |
| |
|
| ||||| | |||||||||| || | |||||||||| |
|
|
| T |
205089 |
atgtcctactcctagaaaaagttcaagggttgaaaca |
205125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 351
Target Start/End: Complemental strand, 226403 - 226110
Alignment:
| Q |
58 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
157 |
Q |
| |
|
||||||||||||||| || | |||||||||| || ||||| |||||| | ||||||||||| |||||||| || ||||||| | ||||| ||||| |
|
|
| T |
226403 |
actgcagagaattccagatgagtttataacaagatttgggaatgaactcgacaatgttgctaccattactgttcccgatggtcgtgagtggaatatggaa |
226304 |
T |
 |
| Q |
158 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
257 |
Q |
| |
|
| |||||| |||| | | ||| |||||||||||| ||| ||||||||||||||||||||| | | || ||||| | | ||||||||||| |
|
|
| T |
226303 |
ctaaagaaatgtggcggccaaattttcttttgcaacaattggcaacagtttgcagaatactattgtatttattatggttgttatttagatttcaaatatg |
226204 |
T |
 |
| Q |
258 |
aagggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaagttcctatcctttcgaaacttcaagaactaatggagaaccaaa |
351 |
Q |
| |
|
|||||||||||||||| | |||| |||||| ||| |||||||||||| | ||| ||||| ||| ||||| || ||||||||||||||||| |
|
|
| T |
226203 |
aagggaattcaaagttcaatgttgttatatacgatagaacttctgttgagatttcttatccattccaaactcggaggactaatggagaaccaaa |
226110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 345
Target Start/End: Complemental strand, 198372 - 198274
Alignment:
| Q |
247 |
tttcaaatatgaagggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaagttcctatcctttcgaaacttcaagaactaatggaga |
345 |
Q |
| |
|
|||||| ||| |||||||||||||||||| |||| |||||| |||| ||||||||||||| | ||| ||| | ||| ||||| |||| ||||||||||| |
|
|
| T |
198372 |
tttcaactatcaagggaattcaaagtttaatgttgttatatatgatacaacttctgttgagatttcttattcattcaaaactccaagtactaatggaga |
198274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 345
Target Start/End: Original strand, 203516 - 203682
Alignment:
| Q |
179 |
gtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatgaagggaattcaaagtttagt- |
277 |
Q |
| |
|
|||| |||||||||||| ||| |||| ||||||||||||||||| | || |||||||| | | |||||| |||||||| |||||||| ||| || |
|
|
| T |
203516 |
gttttcttttgcaacaattggcaacactttgcagaatactattccatcagttacggttgttatttagatttcaagtatgaaggaaattcaaa-tttcgta |
203614 |
T |
 |
| Q |
278 |
gttattatatttgatgcaacttctgttgaaagttcctatcctttcgaaacttcaagaactaatggaga |
345 |
Q |
| |
|
||| |||||| |||| |||||| |||||| | ||| ||||| ||| |||||||||| ||||||||||| |
|
|
| T |
203615 |
gttgttatatatgatccaacttttgttgagatttcttatccattcaaaacttcaagtactaatggaga |
203682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 351
Target Start/End: Complemental strand, 211771 - 211667
Alignment:
| Q |
247 |
tttcaaatatgaagggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaagttcctatcctttcgaaacttcaagaactaatggagaa |
346 |
Q |
| |
|
||||||||| ||||||||||||||||| | |||| |||||| ||| ||||||||||||| | ||| ||||| ||| ||||| || |||||||||||| |
|
|
| T |
211771 |
tttcaaatacgaagggaattcaaagttcaatgttgttatatacgatacaacttctgttgagatttcttatccattccaaactcggaggactaatggagaa |
211672 |
T |
 |
| Q |
347 |
ccaaa |
351 |
Q |
| |
|
|||| |
|
|
| T |
211671 |
gcaaa |
211667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 60 - 450
Target Start/End: Complemental strand, 29838555 - 29838165
Alignment:
| Q |
60 |
tgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaatt |
159 |
Q |
| |
|
||||||||||||| || | |||||||||| || ||| | |||||||| |||||||||||||||||||| || ||||||| | |||||| ||||| | |
|
|
| T |
29838555 |
tgcagagaattccagatgaatttataacaagatttggaaatgaactcaataatgttgctacaattactgttccagatggtcgtgtatggaaaatggaact |
29838456 |
T |
 |
| Q |
160 |
gaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatgaa |
259 |
Q |
| |
|
|||||||||||| ||| |||||| |||||||||||||||| || |||||| |||||| |||||| || |||| ||||||||||| ||||||||||||||| |
|
|
| T |
29838455 |
gaagaaacgtggcgagaatgttttcttttgcaacaaatggcaagagtttgtagaatattattctataggatatggttgcttcatttctttcaaatatgaa |
29838356 |
T |
 |
| Q |
260 |
gggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaagttcctatcctttcgaaacttcaagaactaatggagaaccaaaaacaaatt |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
29838355 |
gggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaatttcctatcctttcgaaactccaagtactaatggagaaccaaaaacaaatt |
29838256 |
T |
 |
| Q |
360 |
atcctagttctagaaaaaggtccaaggttgaaacatgtgagaggcttcggaaaaaggtcaaaaacatgtctaaatatgcttctaaaagagt |
450 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29838255 |
atcctagttctagaaaaaggtccaaggttgaaacatgtgagaggcttcggaaaaaggtcaaaaacatgtctaaatatgcttctaaaagagt |
29838165 |
T |
 |
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Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 58 - 394
Target Start/End: Complemental strand, 6903704 - 6903368
Alignment:
| Q |
58 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
157 |
Q |
| |
|
||||||||||||| | || | |||||||||| || ||||| ||||||||||||||||||||| |||||| || ||||||| | ||||| | || | |
|
|
| T |
6903704 |
actgcagagaatttcagatgagtttataacaagatttgggatagaactcaagaatgttgctacagttactgctcctgatggtcgtgattggagaatgaga |
6903605 |
T |
 |
| Q |
158 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
257 |
Q |
| |
|
|||||||||| || | | ||| ||||| |||| ||||| || |||||||| |||||||||| ||| |||| ||||||| | | ||||||||||| | |
|
|
| T |
6903604 |
ttgaagaaacacggcaattacattttcttttacaacgaatggcaagagtttgcaaaatactattcattaggatatggttgctacctatctttcaaatacg |
6903505 |
T |
 |
| Q |
258 |
aagggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaagttcctatcctttcgaaacttcaagaactaatggagaaccaaaaacaaa |
357 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |||||| ||||| | || |||||| || ||||| | || |||||||||||| |||| ||| | |
|
|
| T |
6903504 |
aaggaaattcaaagtttagtgttattatatttgatgtaacttcggttgagatttgctatccactcaaaactccgagtactaatggagaaacaaatacaca |
6903405 |
T |
 |
| Q |
358 |
ttatcctagttctagaaaaaggtccaaggttgaaaca |
394 |
Q |
| |
|
| ||||| | |||||||||| |||| |||||||||| |
|
|
| T |
6903404 |
atgtcctactcctagaaaaagttccagggttgaaaca |
6903368 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 179 - 367
Target Start/End: Complemental strand, 3808532 - 3808343
Alignment:
| Q |
179 |
gtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatgaagggaattc-aaagtttagt |
277 |
Q |
| |
|
|||| |||||||||||||||| || |||| ||||||||| || || |||| ||||| | | | |||||||| |||||||| ||||| |||||||||| |
|
|
| T |
3808532 |
gttttcttttgcaacaaatggcaagagttcatagaatactactcaataggatatggttggtacctttctttcaattatgaaggaaattccaaagtttagt |
3808433 |
T |
 |
| Q |
278 |
gttattatatttgatgcaacttctgttgaaagttcctatcctttcgaaacttcaagaactaatggagaaccaaaaacaaattatcctagt |
367 |
Q |
| |
|
|||||||||||||| | ||||||||||| | || |||||| ||| ||||| |||| |||||| |||||||||| ||||| ||||||||| |
|
|
| T |
3808432 |
gttattatatttgacgtaacttctgttgggatttgctatccgttcaaaactccaagtactaatagagaaccaaacacaaagtatcctagt |
3808343 |
T |
 |
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