View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16275_low_9 (Length: 394)

Name: NF16275_low_9
Description: NF16275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16275_low_9
NF16275_low_9
[»] chr7 (51 HSPs)
chr7 (177-381)||(8426680-8426884)
chr7 (18-127)||(36769506-36769621)
chr7 (18-127)||(47953233-47953348)
chr7 (18-95)||(1870178-1870255)
chr7 (18-95)||(11321860-11321937)
chr7 (18-95)||(26371784-26371861)
chr7 (18-95)||(26994200-26994277)
chr7 (18-95)||(29661366-29661443)
chr7 (18-95)||(40753198-40753275)
chr7 (18-91)||(41211179-41211252)
chr7 (18-127)||(10932494-10932609)
chr7 (18-127)||(43158623-43158738)
chr7 (18-95)||(3922678-3922755)
chr7 (18-95)||(18386568-18386644)
chr7 (18-95)||(21784914-21784991)
chr7 (18-95)||(3892001-3892078)
chr7 (18-95)||(32873744-32873821)
chr7 (26-95)||(47316673-47316742)
chr7 (23-95)||(11250665-11250737)
chr7 (18-127)||(18470727-18470840)
chr7 (23-95)||(30849221-30849293)
chr7 (18-127)||(43189179-43189294)
chr7 (18-85)||(46633740-46633807)
chr7 (22-95)||(23349266-23349339)
chr7 (21-127)||(38301388-38301500)
chr7 (18-127)||(43368244-43368359)
chr7 (18-95)||(329513-329590)
chr7 (18-95)||(20127332-20127409)
chr7 (26-95)||(30598983-30599052)
chr7 (18-91)||(44748738-44748811)
chr7 (18-95)||(48894760-48894837)
chr7 (20-95)||(11822268-11822343)
chr7 (18-77)||(34295397-34295456)
chr7 (18-95)||(1363679-1363756)
chr7 (18-91)||(16963181-16963254)
chr7 (18-95)||(17237119-17237196)
chr7 (25-86)||(46408939-46408999)
chr7 (18-74)||(26652909-26652965)
chr7 (18-74)||(34117495-34117551)
chr7 (18-94)||(34519551-34519627)
chr7 (23-95)||(46448619-46448691)
chr7 (18-95)||(26910385-26910462)
chr7 (18-91)||(9913568-9913640)
chr7 (18-91)||(9927256-9927328)
chr7 (18-95)||(22724506-22724583)
chr7 (18-83)||(41665562-41665627)
chr7 (22-95)||(43213900-43213973)
chr7 (26-95)||(48445572-48445641)
chr7 (18-64)||(46627213-46627259)
chr7 (18-93)||(37967017-37967092)
chr7 (225-261)||(8351054-8351090)
[»] scaffold0208 (1 HSPs)
scaffold0208 (18-172)||(2227-2395)
[»] scaffold0141 (1 HSPs)
scaffold0141 (209-381)||(9977-10153)
[»] chr2 (47 HSPs)
chr2 (18-95)||(5278808-5278885)
chr2 (18-127)||(17540754-17540869)
chr2 (18-128)||(7258936-7259052)
chr2 (18-128)||(35114824-35114940)
chr2 (18-127)||(37308694-37308809)
chr2 (21-127)||(34338852-34338964)
chr2 (18-127)||(9732866-9732981)
chr2 (18-93)||(16104313-16104388)
chr2 (18-92)||(19513666-19513740)
chr2 (18-91)||(7761551-7761624)
chr2 (18-95)||(33889282-33889359)
chr2 (22-172)||(2644969-2645133)
chr2 (18-127)||(18685875-18685990)
chr2 (18-95)||(32497954-32498031)
chr2 (18-95)||(40692336-40692413)
chr2 (18-95)||(44284668-44284745)
chr2 (18-127)||(3913396-3913511)
chr2 (18-81)||(9717263-9717326)
chr2 (18-93)||(26418962-26419037)
chr2 (22-127)||(33366653-33366764)
chr2 (22-127)||(42706402-42706513)
chr2 (21-95)||(11114914-11114988)
chr2 (18-126)||(12672411-12672525)
chr2 (18-95)||(32766478-32766556)
chr2 (18-95)||(6896207-6896284)
chr2 (18-95)||(40832443-40832520)
chr2 (18-81)||(1247186-1247249)
chr2 (18-95)||(30798462-30798540)
chr2 (18-76)||(37003861-37003919)
chr2 (18-94)||(12939275-12939351)
chr2 (20-95)||(28824531-28824606)
chr2 (18-127)||(30326268-30326382)
chr2 (26-95)||(41366084-41366153)
chr2 (18-127)||(16177819-16177934)
chr2 (22-77)||(38623296-38623351)
chr2 (29-95)||(42365627-42365693)
chr2 (18-95)||(38993045-38993122)
chr2 (27-95)||(8112348-8112416)
chr2 (26-81)||(10399858-10399913)
chr2 (18-77)||(26981701-26981760)
chr2 (26-76)||(4641563-4641613)
chr2 (18-95)||(13829477-13829554)
chr2 (18-76)||(2086111-2086169)
chr2 (19-94)||(30712896-30712975)
chr2 (29-87)||(27462784-27462842)
chr2 (26-67)||(45463112-45463153)
chr2 (33-73)||(130353-130393)
[»] chr6 (37 HSPs)
chr6 (18-172)||(11613712-11613881)
chr6 (18-93)||(2614935-2615010)
chr6 (18-95)||(24203401-24203478)
chr6 (18-95)||(15276950-15277027)
chr6 (18-95)||(15277293-15277370)
chr6 (18-95)||(32132393-32132470)
chr6 (18-127)||(3259722-3259837)
chr6 (18-127)||(3932782-3932897)
chr6 (18-127)||(10960039-10960154)
chr6 (18-127)||(11279167-11279282)
chr6 (18-127)||(17867874-17867989)
chr6 (18-127)||(17877657-17877772)
chr6 (18-127)||(24242703-24242818)
chr6 (22-127)||(32409827-32409938)
chr6 (18-91)||(10324128-10324201)
chr6 (18-95)||(10485196-10485273)
chr6 (18-127)||(166898-167013)
chr6 (18-95)||(4494127-4494205)
chr6 (18-88)||(17443301-17443371)
chr6 (18-95)||(34176869-34176946)
chr6 (22-86)||(14925478-14925542)
chr6 (18-86)||(18057558-18057626)
chr6 (29-95)||(3290720-3290786)
chr6 (18-95)||(11382103-11382178)
chr6 (18-91)||(9902675-9902748)
chr6 (19-91)||(31870117-31870189)
chr6 (26-127)||(3379757-3379864)
chr6 (18-127)||(11675349-11675464)
chr6 (18-95)||(34683998-34684073)
chr6 (19-92)||(18597174-18597247)
chr6 (19-91)||(14808018-14808090)
chr6 (20-95)||(8177895-8177969)
chr6 (18-93)||(29054395-29054470)
chr6 (20-127)||(11212298-11212411)
chr6 (18-95)||(23636262-23636339)
chr6 (18-95)||(32860090-32860167)
chr6 (29-92)||(24785105-24785168)
[»] chr8 (44 HSPs)
chr8 (18-127)||(4052519-4052634)
chr8 (18-95)||(8673044-8673121)
chr8 (18-95)||(13406924-13407001)
chr8 (18-95)||(30501184-30501261)
chr8 (18-95)||(34063167-34063244)
chr8 (18-127)||(29563177-29563292)
chr8 (18-127)||(37664234-37664349)
chr8 (25-95)||(31513572-31513642)
chr8 (18-95)||(27103998-27104075)
chr8 (18-91)||(29672316-29672389)
chr8 (18-95)||(45446494-45446571)
chr8 (18-81)||(21272723-21272786)
chr8 (18-127)||(41709816-41709931)
chr8 (18-91)||(5968857-5968930)
chr8 (18-95)||(14005033-14005110)
chr8 (18-95)||(30543011-30543088)
chr8 (18-127)||(6386615-6386730)
chr8 (18-81)||(32303588-32303651)
chr8 (18-126)||(37618344-37618458)
chr8 (19-95)||(29611044-29611120)
chr8 (18-127)||(3251607-3251722)
chr8 (18-127)||(32019952-32020067)
chr8 (18-127)||(39642922-39643037)
chr8 (22-127)||(40389083-40389194)
chr8 (18-91)||(7394807-7394880)
chr8 (18-95)||(25478282-25478359)
chr8 (26-91)||(31732111-31732176)
chr8 (18-127)||(22999296-22999412)
chr8 (18-127)||(17805730-17805845)
chr8 (18-127)||(34101547-34101662)
chr8 (19-127)||(7591398-7591512)
chr8 (26-88)||(45114102-45114164)
chr8 (18-95)||(10467103-10467180)
chr8 (18-95)||(15001505-15001582)
chr8 (18-95)||(37861898-37861975)
chr8 (18-95)||(41548657-41548734)
chr8 (22-77)||(12753332-12753387)
chr8 (22-93)||(17520638-17520708)
chr8 (35-127)||(37474756-37474854)
chr8 (26-95)||(35225709-35225778)
chr8 (19-90)||(16485803-16485874)
chr8 (18-81)||(10656689-10656752)
chr8 (18-93)||(27109532-27109607)
chr8 (18-95)||(16595138-16595215)
[»] chr5 (41 HSPs)
chr5 (18-127)||(21739103-21739218)
chr5 (18-95)||(4818120-4818197)
chr5 (18-127)||(2351719-2351834)
chr5 (18-127)||(7523211-7523326)
chr5 (20-127)||(11963382-11963495)
chr5 (18-95)||(39918546-39918623)
chr5 (18-127)||(32528754-32528869)
chr5 (19-127)||(24181566-24181680)
chr5 (18-95)||(4689678-4689755)
chr5 (18-95)||(7770259-7770336)
chr5 (18-95)||(31770571-31770648)
chr5 (18-127)||(41790405-41790519)
chr5 (18-128)||(553436-553552)
chr5 (19-91)||(34794927-34794999)
chr5 (18-95)||(5571624-5571701)
chr5 (18-95)||(5673178-5673255)
chr5 (18-95)||(8136876-8136953)
chr5 (18-95)||(28090500-28090577)
chr5 (18-95)||(35701316-35701393)
chr5 (18-95)||(39788232-39788309)
chr5 (22-95)||(40489380-40489453)
chr5 (18-93)||(3735396-3735471)
chr5 (18-93)||(24036269-24036344)
chr5 (18-93)||(29241417-29241492)
chr5 (18-127)||(31644485-31644599)
chr5 (18-95)||(6284278-6284355)
chr5 (18-95)||(22493399-22493476)
chr5 (18-95)||(31880056-31880133)
chr5 (19-127)||(23091246-23091360)
chr5 (18-130)||(41459628-41459745)
chr5 (18-95)||(7208210-7208287)
chr5 (26-95)||(22432289-22432358)
chr5 (18-95)||(18470408-18470485)
chr5 (19-95)||(7725789-7725865)
chr5 (18-93)||(32092964-32093038)
chr5 (18-95)||(5598519-5598596)
chr5 (18-76)||(700600-700658)
chr5 (18-71)||(40182503-40182556)
chr5 (35-95)||(37148569-37148629)
chr5 (18-77)||(8560980-8561039)
chr5 (18-93)||(17031196-17031271)
[»] chr3 (45 HSPs)
chr3 (18-127)||(34026707-34026822)
chr3 (22-127)||(20255088-20255199)
chr3 (18-127)||(42636333-42636448)
chr3 (18-127)||(51259710-51259825)
chr3 (18-95)||(20609616-20609693)
chr3 (18-95)||(24571321-24571398)
chr3 (18-95)||(47958400-47958477)
chr3 (18-127)||(2135110-2135225)
chr3 (18-127)||(12349101-12349216)
chr3 (18-127)||(28675830-28675945)
chr3 (18-127)||(29584915-29585030)
chr3 (18-95)||(1344675-1344752)
chr3 (18-95)||(21221328-21221405)
chr3 (18-95)||(44116979-44117056)
chr3 (18-177)||(49748782-49748956)
chr3 (18-128)||(21373970-21374086)
chr3 (18-127)||(25860351-25860466)
chr3 (25-95)||(51296628-51296698)
chr3 (18-95)||(3864643-3864720)
chr3 (18-95)||(19906802-19906879)
chr3 (18-95)||(25927295-25927372)
chr3 (18-95)||(39052806-39052883)
chr3 (18-95)||(40094543-40094620)
chr3 (18-95)||(51925176-51925253)
chr3 (18-93)||(3964328-3964403)
chr3 (18-127)||(38213394-38213509)
chr3 (18-95)||(29646106-29646183)
chr3 (18-95)||(50678838-50678915)
chr3 (18-95)||(53557763-53557840)
chr3 (18-127)||(31882952-31883067)
chr3 (18-93)||(4851428-4851501)
chr3 (18-88)||(54622771-54622841)
chr3 (18-95)||(33364746-33364823)
chr3 (19-95)||(26282355-26282431)
chr3 (18-128)||(50386385-50386501)
chr3 (18-95)||(3867617-3867694)
chr3 (23-95)||(52300481-52300553)
chr3 (18-63)||(5442331-5442376)
chr3 (20-95)||(6179467-6179543)
chr3 (26-77)||(25954498-25954549)
chr3 (18-63)||(44000301-44000346)
chr3 (41-127)||(41682983-41683075)
chr3 (22-95)||(24721529-24721602)
chr3 (48-93)||(45690876-45690921)
chr3 (19-95)||(22484711-22484787)
[»] chr1 (53 HSPs)
chr1 (18-127)||(1351446-1351561)
chr1 (18-127)||(844735-844850)
chr1 (18-127)||(6711057-6711172)
chr1 (18-127)||(30105691-30105806)
chr1 (18-127)||(32270401-32270516)
chr1 (18-95)||(12890286-12890363)
chr1 (18-127)||(16386902-16387017)
chr1 (18-127)||(32289355-32289470)
chr1 (18-127)||(35387322-35387437)
chr1 (18-127)||(45490886-45491001)
chr1 (18-127)||(51264543-51264658)
chr1 (19-127)||(26118226-26118340)
chr1 (18-95)||(17887996-17888073)
chr1 (18-95)||(42510573-42510650)
chr1 (18-93)||(44738093-44738168)
chr1 (18-95)||(7183966-7184043)
chr1 (18-91)||(16437410-16437483)
chr1 (22-95)||(16451179-16451252)
chr1 (18-95)||(28340352-28340429)
chr1 (18-127)||(16476166-16476281)
chr1 (18-127)||(31004180-31004295)
chr1 (18-127)||(41972959-41973074)
chr1 (18-95)||(24339687-24339765)
chr1 (18-88)||(39281942-39282012)
chr1 (18-95)||(6029350-6029427)
chr1 (26-95)||(17327698-17327767)
chr1 (18-95)||(26764844-26764921)
chr1 (18-95)||(50540392-50540469)
chr1 (25-93)||(5109783-5109851)
chr1 (22-94)||(11772682-11772754)
chr1 (18-127)||(49303365-49303480)
chr1 (17-94)||(3414903-3414980)
chr1 (20-127)||(50304701-50304814)
chr1 (18-77)||(10384415-10384474)
chr1 (26-93)||(13994126-13994193)
chr1 (18-127)||(42512781-42512896)
chr1 (18-92)||(50382455-50382529)
chr1 (18-91)||(41967902-41967975)
chr1 (22-90)||(25539907-25539975)
chr1 (18-74)||(42705308-42705364)
chr1 (22-95)||(1601225-1601296)
chr1 (20-77)||(23799604-23799661)
chr1 (22-95)||(45658873-45658946)
chr1 (22-95)||(51703213-51703285)
chr1 (19-95)||(6144035-6144111)
chr1 (47-95)||(20494957-20495005)
chr1 (18-77)||(38087063-38087122)
chr1 (18-65)||(38663180-38663227)
chr1 (45-95)||(46154982-46155032)
chr1 (26-95)||(16704782-16704851)
chr1 (26-95)||(15539939-15540008)
chr1 (22-91)||(504444-504513)
chr1 (18-79)||(25343274-25343335)
[»] chr4 (72 HSPs)
chr4 (18-95)||(24002381-24002458)
chr4 (18-172)||(56154663-56154832)
chr4 (18-127)||(38812562-38812677)
chr4 (18-95)||(9512307-9512384)
chr4 (18-173)||(20802405-20802575)
chr4 (18-95)||(36885974-36886051)
chr4 (18-95)||(52319365-52319442)
chr4 (21-127)||(33176961-33177073)
chr4 (18-167)||(24210361-24210525)
chr4 (18-127)||(33552771-33552886)
chr4 (18-127)||(46680439-46680554)
chr4 (19-93)||(6776621-6776695)
chr4 (18-95)||(55593927-55594004)
chr4 (18-172)||(1231353-1231522)
chr4 (18-93)||(21580068-21580143)
chr4 (18-127)||(23521922-23522037)
chr4 (18-127)||(32181305-32181420)
chr4 (26-127)||(38486186-38486293)
chr4 (18-81)||(43641141-43641204)
chr4 (18-89)||(55065306-55065377)
chr4 (25-95)||(2725100-2725170)
chr4 (18-95)||(53200610-53200688)
chr4 (18-95)||(3649678-3649755)
chr4 (18-95)||(16320561-16320638)
chr4 (18-95)||(21202781-21202858)
chr4 (18-95)||(36743655-36743732)
chr4 (18-95)||(50727880-50727957)
chr4 (18-95)||(50735894-50735971)
chr4 (23-95)||(34929962-34930034)
chr4 (18-127)||(29785466-29785581)
chr4 (18-93)||(54543032-54543106)
chr4 (18-95)||(2787006-2787083)
chr4 (18-95)||(41711889-41711966)
chr4 (18-95)||(49152067-49152144)
chr4 (18-95)||(52949762-52949839)
chr4 (25-127)||(36497266-36497374)
chr4 (18-78)||(44324326-44324386)
chr4 (18-127)||(50178421-50178537)
chr4 (18-95)||(4325833-4325910)
chr4 (18-95)||(20517989-20518066)
chr4 (18-95)||(20694413-20694490)
chr4 (22-95)||(26083385-26083458)
chr4 (22-95)||(28115298-28115371)
chr4 (18-95)||(44649131-44649208)
chr4 (18-81)||(23327960-23328024)
chr4 (18-94)||(37865795-37865871)
chr4 (35-95)||(42870030-42870090)
chr4 (18-127)||(11056084-11056199)
chr4 (22-127)||(29592941-29593052)
chr4 (20-91)||(42772832-42772903)
chr4 (18-95)||(12600928-12601005)
chr4 (18-95)||(29616212-29616284)
chr4 (22-91)||(50186574-50186643)
chr4 (18-95)||(50729509-50729586)
chr4 (26-93)||(25978580-25978647)
chr4 (18-77)||(37695526-37695585)
chr4 (25-76)||(37931969-37932020)
chr4 (18-126)||(2629881-2629995)
chr4 (18-95)||(39078703-39078780)
chr4 (18-95)||(47642458-47642535)
chr4 (25-127)||(47361343-47361450)
chr4 (29-172)||(6973788-6973946)
chr4 (21-61)||(38520544-38520584)
chr4 (19-95)||(52673854-52673930)
chr4 (18-81)||(9807198-9807260)
chr4 (54-127)||(14296645-14296724)
chr4 (54-127)||(14314893-14314972)
chr4 (26-95)||(22318351-22318420)
chr4 (56-173)||(56487161-56487288)
chr4 (27-91)||(7001903-7001967)
chr4 (22-77)||(43739507-43739562)
chr4 (18-74)||(7554945-7555001)
[»] scaffold0169 (2 HSPs)
scaffold0169 (18-93)||(18036-18111)
scaffold0169 (18-81)||(12530-12593)
[»] scaffold0729 (1 HSPs)
scaffold0729 (19-93)||(4561-4635)
[»] scaffold0054 (1 HSPs)
scaffold0054 (18-127)||(23614-23729)
[»] scaffold0014 (1 HSPs)
scaffold0014 (18-127)||(101988-102103)
[»] scaffold0650 (1 HSPs)
scaffold0650 (18-127)||(1585-1700)
[»] scaffold0027 (1 HSPs)
scaffold0027 (18-127)||(15211-15326)
[»] scaffold0181 (1 HSPs)
scaffold0181 (18-95)||(19071-19147)
[»] scaffold0098 (1 HSPs)
scaffold0098 (18-95)||(51478-51554)
[»] scaffold0025 (1 HSPs)
scaffold0025 (22-95)||(5419-5493)
[»] scaffold0280 (1 HSPs)
scaffold0280 (22-95)||(13667-13740)
[»] scaffold0050 (1 HSPs)
scaffold0050 (18-95)||(42930-43007)
[»] scaffold0004 (1 HSPs)
scaffold0004 (18-95)||(372944-373021)
[»] scaffold0360 (1 HSPs)
scaffold0360 (18-77)||(15379-15438)
[»] scaffold0957 (1 HSPs)
scaffold0957 (35-93)||(2478-2536)
[»] scaffold0155 (1 HSPs)
scaffold0155 (18-90)||(33530-33601)
[»] scaffold0047 (1 HSPs)
scaffold0047 (26-92)||(19139-19205)


Alignment Details
Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 177 - 381
Target Start/End: Original strand, 8426680 - 8426884
Alignment:
Q  177 agtaaatttagtatttcctatttcatcctaaaaaagcgtacttataagttctaattcgcctatcaactcattagagaagtaatactctataatttactat 276  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  8426680 agtaaatttggtattccctatttcatcgtaaaaaagcgtacttataagttctaatttggctatcaactcattagagaagtaatactctataatttactat 8426779  T
Q  277 tttgtggtcttgcgctgcttttattggaaacttactctataattnnnnnnntttacgaagtgggggtttgtatctattgtgactatggtatggcagcaag 376  Q
     | |  ||| ||||||||||| || |||||||||||||||||||       ||| ||| |||||| ||||||||||||||||||||||||||||||||||    
T  8426780 atggctgtcatgcgctgctttaataggaaacttactctataatttaaaaagttttcgatgtggggctttgtatctattgtgactatggtatggcagcaag 8426879  T
Q  377 tatag 381  Q
    |||||    
T  8426880 tatag 8426884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 36769621 - 36769506
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    ||||| ||  ||||||||||    
T  36769621 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagtt 36769522  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  36769521 ttacaaatcaaacact 36769506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 47953233 - 47953348
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    ||||| ||  ||||||||||    
T  47953233 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagtt 47953332  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  47953333 ttacaaatcaaacact 47953348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 1870178 - 1870255
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1870178 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 1870255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 11321937 - 11321860
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  11321937 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtccgttgcctccagt 11321860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 26371861 - 26371784
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26371861 gtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 26371784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 26994277 - 26994200
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  26994277 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctccagt 26994200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 29661366 - 29661443
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29661366 gtacgtgggataaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 29661443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 40753198 - 40753275
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40753198 gtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 40753275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 41211252 - 41211179
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41211252 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctc 41211179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 10932609 - 10932494
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  10932609 gtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtt 10932510  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  10932509 ttacaaatcaaacact 10932494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 43158738 - 43158623
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  43158738 gtacgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtt 43158639  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  43158638 ttacaaatcaaacact 43158623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 3922755 - 3922678
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||    
T  3922755 gtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttttgtcttgtcccttgcctccagt 3922678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 18386568 - 18386644
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  18386568 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgag-ttttgtcctgtcccttgcctccagt 18386644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 21784914 - 21784991
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  21784914 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagt 21784991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 3892078 - 3892001
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| ||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  3892078 gtacgtaggacaaaaagttgtgctgtgatttggtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagt 3892001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 32873821 - 32873744
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  32873821 gtacgtgagacaaaaagttgtgttgtggtttggtgaaggacaaaaatatgagtttttgtcctgtcccttgcctccagt 32873744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 47316742 - 47316673
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47316742 gacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 47316673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 11250665 - 11250737
Alignment:
Q  23 tgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  11250665 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgattttttgtcctgtcccttgcctccagt 11250737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 18470727 - 18470840
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||    ||||| ||  ||||||||||    
T  18470727 gtacgtgggacaaaaagttatgctgtggtttggtgagagacaaaaatatgagtttttgtcctgt--cttgcctccagtttgtcctgtacctgaaacagtt 18470824  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  18470825 ttacaaatcaaacact 18470840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 30849293 - 30849221
Alignment:
Q  23 tgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  30849293 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgccaccagt 30849221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 43189294 - 43189179
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||    ||||| ||  ||||||| ||    
T  43189294 gtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttacctccagtttgtcctgtacctgaaacattt 43189195  T
Q  112 ttataaatcaaacact 127  Q
    ||||||||||||||||    
T  43189194 ttataaatcaaacact 43189179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 46633740 - 46633807
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttcct 85  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  46633740 gtacgtgggacaaaaagttgtgctgtggtttggtgagggataaaaatatgagtttttgtcttgttcct 46633807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 23349339 - 23349266
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  23349339 gtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgttctgtcccttgcctccagt 23349266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 38301388 - 38301500
Alignment:
Q  21 cgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtttta 114  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||  ||||||||||    ||||| ||  |||||||||||||    
T  38301388 cgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagtttta 38301487  T
Q  115 taaatcaaacact 127  Q
     ||||||||||||    
T  38301488 caaatcaaacact 38301500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 43368244 - 43368359
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt----cctata--tgaaacagtt 111  Q
    |||||| ||||||||| ||||||||||||||| ||||| |||||||||| ||||||||||| ||  ||||||||||||    ||||||  ||||||||||    
T  43368244 gtacgtaggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtcccgtctcttgcctccagtttgtcctatacctgaaacagtt 43368343  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  43368344 ttacaaatcaaacact 43368359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 329513 - 329590
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||||| ||| | |||||||||||    
T  329513 gtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatttcagtttttgtcttgtcctttgcctccagt 329590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 20127332 - 20127409
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||||||||| || ||||||||||| |||||||||||||    
T  20127332 gtacgtgggacaaaaagttgtgatgtggtttgctgaggaacaaaaatatcagcttttgtcctgtcccttgcctccagt 20127409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 30599052 - 30598983
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  30599052 gacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagcttttgtcctgtcccttgcctccagt 30598983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 44748738 - 44748811
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  44748738 gtacgtgggacaaaaagttgtattgtggtttggtgagggacaaaaatttgagtttttgttctgtcccttgcctc 44748811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 48894760 - 48894837
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||| ||||  |||||||||||||||||||||||||| |||||| ||||||    
T  48894760 gtacgtgggacaaaaagttgtgatgtggtttagtgaatgacaaaaatatgagtttttgtcctgtcccttgcatccagt 48894837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 11822268 - 11822343
Alignment:
Q  20 acgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||||| ||| |||||| ||||||    
T  11822268 acgtgggacaaaaagttgtgttgtggtttagtgaaggacaaaaatatgagtttttgtcatgtcccttgcatccagt 11822343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 34295456 - 34295397
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||    
T  34295456 gtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagtttttgtc 34295397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 1363679 - 1363756
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||| ||||||||| |||||||||||||||| || ||||||| ||| |||||||||||||    
T  1363679 gtacgtgagacaaaaagttgtgatgtggtttgatgagggacaaaaatatcagcttttgtcatgtcccttgcctccagt 1363756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 16963181 - 16963254
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||||||||||| ||||  ||||||||| | ||||||||||||||||||||||||||| | |||||||||    
T  16963181 gtacgtgggacaaaaagttgtattgtggtttgataagggacaaaaatatgagtttttgtcctatcccttgcctc 16963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 17237119 - 17237196
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||| |||||||| ||||  |||||||||||||||||||||| |||||||||| ||||||    
T  17237119 gtacgtgagacaaaaagttgtgttgtggtttagtgaatgacaaaaatatgagtttttgtcatgttccttgcatccagt 17237196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 46408939 - 46408999
Alignment:
Q  25 ggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttcctt 86  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  46408939 ggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgag-ttttgtcctgtccctt 46408999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 26652909 - 26652965
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagttttt 74  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  26652909 gtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagttttt 26652965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 34117495 - 34117551
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagttttt 74  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34117495 gtacatggaacaaaaaattgtgatgtggtttggtgagggacaaaaatatgagttttt 34117551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 34519551 - 34519627
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccag 94  Q
    |||| ||||||||||| ||||| |||||||||| |||||||||||||   |||||||||||||| ||||||||||||    
T  34519551 gtacctgggacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctccag 34519627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 46448691 - 46448619
Alignment:
Q  23 tgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||||||||| || ||| |||||| ||||||    
T  46448691 tgggacaaaaagttgtgctgtggtttagtgacggacaaaaatatgagtttttatcatgtcccttgcatccagt 46448619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 26910462 - 26910385
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||| |||||||||| |||||||||||||   ||||||| |||||| |||||||||||||    
T  26910462 gtacgtgtgacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttatcctgtcccttgcctccagt 26910385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 9913568 - 9913640
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||||| ||||| ||||| |||||||||||||| ||| ||||||| | |||||||||||| |||||||||    
T  9913568 gtacgtgggaaaaaaagttgtgatgtggtttggtgagcgac-aaaatatcaatttttgtcctgtcccttgcctc 9913640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 9927256 - 9927328
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||||| ||||| ||||| |||||||||||||| ||| ||||||| | |||||||||||| |||||||||    
T  9927256 gtacgtgggaaaaaaagttgtgatgtggtttggtgagcgac-aaaatatcaatttttgtcctgtcccttgcctc 9927328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 22724583 - 22724506
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||||   || ||||||| | | |||||||||||||    
T  22724583 gtacgtgggacataaagttgcgctgtggtttggtgagggacaaaaattgcagcttttgtcatatcccttgcctccagt 22724506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 41665627 - 41665562
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttc 83  Q
    ||||||| |||||||| ||||| |||||||||| |||||||||||||   ||||||||||||||||    
T  41665627 gtacgtgagacaaaaagttgtgatgtggtttggcgagggacaaaaattgcagtttttgtcctgttc 41665562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 43213973 - 43213900
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||| || |||| || ||| |||||||| ||||    
T  43213973 gtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatatcagcttttatcttgtcccttgccttcagt 43213900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 48445572 - 48445641
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||| |||| ||||| |||||||| |||||||||| | |||||||||| ||| |||||||||||||    
T  48445572 gacaaaaagttgtcctgtgatttggtgaaggacaaaaatttcagtttttgtcatgtcccttgcctccagt 48445641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 46627213 - 46627259
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaat 64  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  46627213 gtacgtgagacaaaaaattgtgctgtggtttgatgagggataaaaat 46627259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 37967017 - 37967092
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||| ||||||| ||||| |||||| | ||||  |||||||||||| ||||||||| ||| |||||| ||||    
T  37967017 gtacgtggaacaaaaagttgtgatgtggtctagtgaaagacaaaaatatgggtttttgtcttgtcccttgcatcca 37967092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 261
Target Start/End: Original strand, 8351054 - 8351090
Alignment:
Q  225 ttctaattcgcctatcaactcattagagaagtaatac 261  Q
    |||| |||||||||||||||||||||||||| |||||    
T  8351054 ttctcattcgcctatcaactcattagagaagaaatac 8351090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 2395 - 2227
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  2395 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaaacagtt 2296  T
Q  112 ttataaatcaaac-------actaaagttgttccatcctat-cttcattttttagcaattcaaacgcac 172  Q
    ||| |||||||||       ||||||||||||| ||||| | |||||||||||||||| ||||||||||    
T  2295 ttacaaatcaaacactgaaaactaaagttgttctatcctgtccttcattttttagcaaatcaaacgcac 2227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 209 - 381
Target Start/End: Complemental strand, 10153 - 9977
Alignment:
Q  209 aaagcgtacttataagttctaattcgcctatcaactcattagagaagtaata--ctctataatttactattttgtggtcttgcgctgcttttattggaaa 306  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||| | || ||| |||||||||||||| |||||    
T  10153 aaagcatacttataagttctaattcgcctatcaactcattagagaagtaatactctctataacttactatatggttgtcatgcgctgcttttataggaaa 10054  T
Q  307 ctta--ctctataattnnnnnnntttacgaagtgggggtttgtatctattgtgactatggtatggcagcaagtatag 381  Q
    ||||  ||||||||||       ||| | |  ||||| |||||||||||| ||||||||||||| ||||||||||||    
T  10053 cttactctctataatttaaaaagttttcaatatggggctttgtatctattatgactatggtatgacagcaagtatag 9977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 8e-34; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 5278885 - 5278808
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5278885 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 5278808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 17540754 - 17540869
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  17540754 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacttgaaacagtt 17540853  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  17540854 ttacaaatcaaacact 17540869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 7258936 - 7259052
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  7258936 gtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtt 7259035  T
Q  112 ttataaatcaaacacta 128  Q
    ||| |||||||||||||    
T  7259036 ttacaaatcaaacacta 7259052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 35114824 - 35114940
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |    ||||| ||  ||||||||||    
T  35114824 gtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagtt 35114923  T
Q  112 ttataaatcaaacacta 128  Q
    ||| |||||||||||||    
T  35114924 ttacaaatcaaacacta 35114940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 37308694 - 37308809
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  37308694 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtt 37308793  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  37308794 ttacaaatcaaacact 37308809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 34338852 - 34338964
Alignment:
Q  21 cgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtttta 114  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    ||||| ||  |||||||||||||    
T  34338852 cgtgggacaaaaagttgtgctgtggtttggtgagggtcaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtttta 34338951  T
Q  115 taaatcaaacact 127  Q
     ||||||||||||    
T  34338952 caaatcaaacact 34338964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 9732981 - 9732866
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||    ||||| ||  ||||||||||    
T  9732981 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagtt 9732882  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  9732881 ttacaaatcaaacact 9732866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 16104313 - 16104388
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16104313 gtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcca 16104388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 19513740 - 19513666
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcc 92  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  19513740 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctcc 19513666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 7761624 - 7761551
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7761624 gtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctc 7761551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 33889282 - 33889359
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  33889282 gtacgtgggacaaaaagttgtgatgtggtttggtgagggaaaaaaatatgagtttttgtcctgtcccttgcctccagt 33889359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 2645133 - 2644969
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttat 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    ||||| ||  |||||||||||||     
T  2645133 gtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcct-ctccttgcctccagtttgtcctgtacctgaaacagttttac 2645035  T
Q  116 aaatcaaac--------actaaagttgttccatcctat-cttcattttttagcaattcaaacgcac 172  Q
    |||||||||        |||| |||||||| ||||| | |||||||||||||||| ||||||||||    
T  2645034 aaatcaaacactggacaactagagttgttctatcctgtccttcattttttagcaaatcaaacgcac 2644969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 18685875 - 18685990
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||| | |||||||||    ||||| ||  ||||||||||    
T  18685875 gtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaatatgagtttttgtcttgtcctttgcctccagtttgtcctgtacctgaaacagtt 18685974  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  18685975 ttacaaatcaaacact 18685990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 32497954 - 32498031
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  32497954 gtacgtgggacaaaaagttgtgatgtggtttggtgaggtacaaaaatatgagtttttgtcctgtcccttgccttcagt 32498031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 40692336 - 40692413
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||    
T  40692336 gtacgtgggacaaaaagttgttctgtggtttggtgagggacaaaaatacgagtttttgtcctgtcccttgtctccagt 40692413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 44284668 - 44284745
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  44284668 gtacgtgagacaaaaagttgtgctgtggtttagtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagt 44284745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 3913511 - 3913396
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||| || ||||||||||||||||| ||||||||||    ||| ||||  ||||||||||    
T  3913511 gtacgtggaacaaaaagttgtgttgtggtttggtgagggacaaacatgtgagtttttgtcctgtttcttgcctccagtttgtcatatacctgaaacagtt 3913412  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  3913411 ttacaaatcaaacact 3913396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 9717263 - 9717326
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 81  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  9717263 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaacatgagtttttgtcctgt 9717326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 26418962 - 26419037
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||    
T  26418962 gtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttttgtcatgtccctcgcctcca 26419037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 33366653 - 33366764
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttat 115  Q
    |||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||    ||||| ||  |||||||||||||     
T  33366653 gtgggagaaaaagttgtgttgtggtttggtgaggaacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttac 33366752  T
Q  116 aaatcaaacact 127  Q
    ||||||||||||    
T  33366753 aaatcaaacact 33366764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 42706402 - 42706513
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttat 115  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| | | |||||||||||    ||||| ||  |||||||||||||     
T  42706402 gtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttatcccttgcctccagtttgtcctgtacctgaaacagttttac 42706501  T
Q  116 aaatcaaacact 127  Q
    ||||||||||||    
T  42706502 aaatcaaacact 42706513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 11114914 - 11114988
Alignment:
Q  21 cgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  11114914 cgtgggacaaaaagttgtgatgtggtttggtgaggaacaaaaatatgattttttgtcctgtcccttgcctccagt 11114988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 12672525 - 12672411
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt----cctata--tgaaacagtt 111  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||||    ||||||  ||||||||||    
T  12672525 gtacttgggataaaaacttgtgttgtggtttggtgagggacaaaaatatgagattttgtcccgtcccttgcctccagtttgtcctatacctgaaacagtt 12672426  T
Q  112 ttataaatcaaacac 126  Q
    ||| |||||||||||    
T  12672425 ttacaaatcaaacac 12672411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 32766556 - 32766478
Alignment:
Q  18 gtacgtgggacaaaaaa-ttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  32766556 gtacgtaggacaaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcccttgcctccagt 32766478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 6896207 - 6896284
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||| |||||| |||||||||||||    
T  6896207 gtacgtgggacaaaaagttgtgctgttgtttggtgagggacaaaaatttcagtttttatcctgtcccttgcctccagt 6896284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 40832520 - 40832443
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  40832520 gtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatccgtttttgtcctgtcccttgcctccagt 40832443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 1247186 - 1247249
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 81  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||    
T  1247186 gtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaatatgagattttgtcctgt 1247249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 30798540 - 30798462
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagt-ttttgtcctgttccttgcctccagt 95  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  30798540 gtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttttttcctgtcccttgcctccagt 30798462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 37003919 - 37003861
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgt 76  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  37003919 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgt 37003861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 12939351 - 12939275
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccag 94  Q
    ||||||| || ||||| ||||||||||||||||||| |||||||||||| |||||||||| ||| ||||||||||||    
T  12939351 gtacgtgagataaaaagttgtgctgtggtttggtgaaggacaaaaatatcagtttttgtcatgtcccttgcctccag 12939275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 28824606 - 28824531
Alignment:
Q  20 acgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  28824606 acgtgagataaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgacccttgactccagt 28824531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 30326382 - 30326268
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    ||||||| |||||||| |||||||||||||||| ||| ||| |||||||||||||||||||||| || ||||||||    ||||| ||  ||||||||||    
T  30326382 gtacgtgagacaaaaagttgtgctgtggtttggcgagagac-aaaatatgagtttttgtcctgtcccctgcctccagtttgtcctgtacctgaaacagtt 30326284  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  30326283 ttacaaatcaaacact 30326268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 41366153 - 41366084
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||||||||| |  ||||||||||||    
T  41366153 gacaaaaaattgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctatctcttgcctccagt 41366084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 16177934 - 16177819
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccag----tcctata--tgaaacagtt 111  Q
    ||||||| |||||||| ||||| ||||||||||| || ||||||||||| ||||| |||||||| | ||||||||||    |||| ||  ||||||||||    
T  16177934 gtacgtgagacaaaaagttgtgttgtggtttggtaagcgacaaaaatatcagtttatgtcctgtccattgcctccagtttatcctgtacttgaaacagtt 16177835  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  16177834 ttacaaatcaaacact 16177819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 38623351 - 38623296
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||||    
T  38623351 gtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtc 38623296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 42365627 - 42365693
Alignment:
Q  29 aaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||| ||||| ||||||||| ||| ||||||||||||||||||||||| ||| |||||||||||||    
T  42365627 aaaaagttgtgttgtggtttgatgaaggacaaaaatatgagtttttgtcttgtcccttgcctccagt 42365693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 38993122 - 38993045
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||||  |||| ||||||||   |||||||||||||| |||||||||||||    
T  38993122 gtacgtgggacaaaaagttgtgttgtggtttgacgaggaacaaaaattgtagtttttgtcctgtcccttgcctccagt 38993045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 8112348 - 8112416
Alignment:
Q  27 acaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||||||  |||  ||||||||||||    
T  8112348 acaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtattgtctcttgcctccagt 8112416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 10399913 - 10399858
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 81  Q
    |||||||| ||||| |||||||| |||| |||||||||||||||||||||||||||    
T  10399913 gacaaaaagttgtgttgtggtttagtgaaggacaaaaatatgagtttttgtcctgt 10399858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 26981760 - 26981701
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    |||||| | ||||||| || || |||||||||||||||||||||||||||||||||||||    
T  26981760 gtacgtagaacaaaaagttttgttgtggtttggtgagggacaaaaatatgagtttttgtc 26981701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 4641563 - 4641613
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgt 76  Q
    |||||||| |||||||||||||||||||| ||||||||||||| |||||||    
T  4641563 gacaaaaagttgtgctgtggtttggtgagagacaaaaatatgaatttttgt 4641613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 13829477 - 13829554
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||| ||||||||||| ||||| |||||| | |||| |||||||||| | |||||||||||||| |||| ||||||||    
T  13829477 gtacctgggacaaaaagttgtgatgtggtctagtgatggacaaaaatttcagtttttgtcctgtcccttacctccagt 13829554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 2086111 - 2086169
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgt 76  Q
    |||||||  ||||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  2086111 gtacgtgaaacaaaaagttgtactgtggtttgggtagggacaaaaatatgagtttttgt 2086169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 30712896 - 30712975
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtt----tggtgagggacaaaaatatgagtttttgtcctgttccttgcctccag 94  Q
    ||||||||| ||||| ||||| |||||||    ||||||||||||||||| | ||||| |||||||| ||||||||||||    
T  30712896 tacgtgggataaaaagttgtgttgtggttaatttggtgagggacaaaaatttcagtttgtgtcctgtcccttgcctccag 30712975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 27462842 - 27462784
Alignment:
Q  29 aaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttg 87  Q
    ||||| ||||| |||||||||||||||||||||||||  || ||||||| ||| |||||    
T  27462842 aaaaagttgtgttgtggtttggtgagggacaaaaataacagcttttgtcttgtcccttg 27462784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 45463153 - 45463112
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatg 67  Q
    |||||||| ||||| |||||||||||||| ||||||||||||    
T  45463153 gacaaaaagttgtgttgtggtttggtgagtgacaaaaatatg 45463112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 130353 - 130393
Alignment:
Q  33 aattgtgctgtggtttggtgagggacaaaaatatgagtttt 73  Q
    ||||||| |||||||||||||||||||||||| | ||||||    
T  130353 aattgtgttgtggtttggtgagggacaaaaatttaagtttt 130393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 11613881 - 11613712
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||| ||  ||||||||||    
T  11613881 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgtctccattttgtcctgtacctgaaacagtt 11613782  T
Q  112 ttataaatcaaac--------actaaagttgttccatcctat-cttcattttttagcaattcaaacgcac 172  Q
    ||| |||||||||        |||||||||||||  |||| | |||||||||||||||| ||||||||||    
T  11613781 ttacaaatcaaacactggacaactaaagttgttctgtcctgtccttcattttttagcaaatcaaacgcac 11613712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 2614935 - 2615010
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2614935 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcca 2615010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 24203401 - 24203478
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  24203401 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagt 24203478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 15277027 - 15276950
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15277027 gtacgtgggaaaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 15276950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 15277370 - 15277293
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15277370 gtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 15277293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 32132470 - 32132393
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32132470 gtacgtgggacaaaaagttgtgttgtggattggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 32132393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 3259722 - 3259837
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||    ||||| ||  ||||||||||    
T  3259722 gtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagtt 3259821  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  3259822 ttacaaatcaaacact 3259837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 3932897 - 3932782
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||  |||||||||||    ||||| ||  ||||||||||    
T  3932897 gtacgtgggacaaaaagttgtgatgtggtttggtgagagacaaaaatatgagtttttgtcctgccccttgcctccagtttgtcctgtacctgaaacagtt 3932798  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  3932797 ttacaaatcaaacact 3932782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 10960039 - 10960154
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| ||    ||||| ||  ||||||||||    
T  10960039 gtacgtgggacaaaaagttgtgttgtggtttgttgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcctgtacctgaaacagtt 10960138  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  10960139 ttacaaatcaaacact 10960154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 11279167 - 11279282
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||    ||||| ||  ||||||||||    
T  11279167 gtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccatgcctccagtttgtcctgtacttgaaacagtt 11279266  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  11279267 ttacaaatcaaacact 11279282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 17867874 - 17867989
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||    ||||| ||  ||||||||||    
T  17867874 gtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagtt 17867973  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  17867974 ttacaaatcaaacact 17867989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 17877657 - 17877772
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||    ||||| ||  ||||||||||    
T  17877657 gtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagtt 17877756  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  17877757 ttacaaatcaaacact 17877772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 24242703 - 24242818
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||  ||| |||||||||||    ||||| ||  ||||||||||    
T  24242703 gtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgttgtgtcccttgcctccagtttgtcctgtacctgaaacagtt 24242802  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  24242803 ttacaaatcaaacact 24242818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 32409938 - 32409827
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttat 115  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    ||||| ||  |||||||||||||     
T  32409938 gtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagttttac 32409839  T
Q  116 aaatcaaacact 127  Q
    ||||||||||||    
T  32409838 aaatcaaacact 32409827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 10324201 - 10324128
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10324201 gtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctc 10324128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 10485196 - 10485273
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||    
T  10485196 gtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagt 10485273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 167013 - 166898
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||  ||| ||||||||| |    ||||| ||  ||||||||||    
T  167013 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgttatgtcccttgcctctagtttgtcctgtacctgaaacagtt 166914  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  166913 ttacaaatcaaacact 166898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 4494205 - 4494127
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagt-ttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  4494205 gtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagttttttgtcctgtcacttgcctccagt 4494127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 17443301 - 17443371
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgc 88  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  17443301 gtacgtgggacaaaaagttgtactgtggtttggtgagggataaaaatatgagtttttgtcctgtcccttgc 17443371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 34176869 - 34176946
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||  ||||||||||||    
T  34176869 gtacgtgggacaaaaagttgtgctgtgatttggtgagagacaaaaatatgagtttttgtcatgtcacttgcctccagt 34176946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 14925542 - 14925478
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttcctt 86  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  14925542 gtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctgtccctt 14925478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 18057558 - 18057626
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttcctt 86  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| ||||    
T  18057558 gtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcatgtccctt 18057626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 3290720 - 3290786
Alignment:
Q  29 aaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  3290720 aaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 3290786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 11382103 - 11382178
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  11382103 gtacgtgagacaaaaagttgtgttgtggtttggtgag--acaaaaatatgagtttttgtcctgtcccttgcctccagt 11382178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 9902748 - 9902675
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||| |||||||||||||| |||| ||||    
T  9902748 gtacgtgggacaaaaagttgtgctgtggtttaatgagggacaaaaatatcagtttttgtcctgtcccttacctc 9902675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 31870189 - 31870117
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||  ||| |||||||||    
T  31870189 tacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgttttgtcccttgcctc 31870117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 3379757 - 3379864
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcc--tatatgaaacagttttataaat 119  Q
    |||||||| ||||||| |||||||||||| ||||||||||| |||||||||| |||  ||||||||||    ||||  ||| ||||||||||||||||||    
T  3379757 gacaaaaagttgtgctatggtttggtgagcgacaaaaatatcagtttttgtcttgtctcttgcctccagtttgtcctgtatctgaaacagttttataaat 3379856  T
Q  120 caaacact 127  Q
    ||||||||    
T  3379857 caaacact 3379864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 11675464 - 11675349
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||| ||||| ||||| | |||||||||||| ||||||||||| |||||||||||||| | |||||||||    ||||| ||  ||||||||||    
T  11675464 gtacgtgggataaaaagttgtgttatggtttggtgagagacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagtt 11675365  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  11675364 ttacaaatcaaacact 11675349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 34684073 - 34683998
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||  ||||||||||||| ||| |||||||||||||    
T  34684073 gtacgtggaacaaaaagttgtgttgtggtttggtgagggacaaaa--atgagtttttgtcgtgtcccttgcctccagt 34683998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 18597247 - 18597174
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcc 92  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| | || ||||||| ||| ||||||||||    
T  18597247 tacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagattttgtcatgtcccttgcctcc 18597174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 14808090 - 14808018
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| |||| | |||||||||    
T  14808090 tacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcaatttttatcctatcccttgcctc 14808018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 8177969 - 8177895
Alignment:
Q  20 acgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||||| | ||||| |||||| |||||||||||||    
T  8177969 acgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaatatca-tttttatcctgtcccttgcctccagt 8177895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 29054395 - 29054470
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||||   |||||||||| ||| |||||| ||||    
T  29054395 gtacgtgagacaaaaagttgtgctgtggtttggcgagggacaaaaattgtagtttttgtcatgtcccttgcttcca 29054470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 11212298 - 11212411
Alignment:
Q  20 acgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtttt 113  Q
    ||||| |||||||  || || |||||||||||||||||||||| |||||||||||||| ||| ||||  |||||    ||||| ||  ||||||||||||    
T  11212298 acgtgagacaaaaggttatgttgtggtttggtgagggacaaaagtatgagtttttgtcatgtcccttatctccagtttgtcctgtacctgaaacagtttt 11212397  T
Q  114 ataaatcaaacact 127  Q
    | ||||||||||||    
T  11212398 acaaatcaaacact 11212411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 23636262 - 23636339
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||| ||||||||  |||   |||||||||||||||||| |||| |||||||| ||||||    
T  23636262 gtacgtgagacaaaaatttgtgttgtggtttaatgaataacaaaaatatgagtttttatcctattccttgcatccagt 23636339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 32860090 - 32860167
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||  |||||||||||||||| || ||||||||||   || ||||||| ||| |||||||||||||    
T  32860090 gtacgtgagacaaaaggttgtgctgtggtttggcgatggacaaaaattgcagcttttgtcatgtcccttgcctccagt 32860167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 24785105 - 24785168
Alignment:
Q  29 aaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcc 92  Q
    ||||||||||| |||||||| ||||| ||||| ||| | |||||||||| ||| ||||||||||    
T  24785105 aaaaaattgtgttgtggtttagtgagcgacaagaatttcagtttttgtcatgtcccttgcctcc 24785168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 4052519 - 4052634
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  4052519 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaaacagtt 4052618  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  4052619 ttacaaatcaaacact 4052634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 8673121 - 8673044
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8673121 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 8673044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 13407001 - 13406924
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13407001 gtacgtgagacaaaaaattatgctgtggtttggtgagggacaaaaatatgagtttttgttctgttccttgcctccagt 13406924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 30501184 - 30501261
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  30501184 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctccagt 30501261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 34063167 - 34063244
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  34063167 gtacgtgggacaaaaagttgtgctgtggtttggcgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 34063244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 29563292 - 29563177
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |    ||||| ||  ||||||||||    
T  29563292 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcgagtttgtcctgtacctgaaacagtt 29563193  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  29563192 ttacaaatcaaacact 29563177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 37664349 - 37664234
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |    ||||| ||  ||||||||||    
T  37664349 gtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagtt 37664250  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  37664249 ttacaaatcaaacact 37664234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 31513642 - 31513572
Alignment:
Q  25 ggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31513642 ggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 31513572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 27103998 - 27104075
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  27103998 gtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagt 27104075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 29672389 - 29672316
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29672389 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctc 29672316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 45446494 - 45446571
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||    
T  45446494 gtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttttatcctgtcccttgcctccagt 45446571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 21272723 - 21272786
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 81  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21272723 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 21272786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 41709816 - 41709931
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||    ||||| ||  ||||||||||    
T  41709816 gtacgttggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcatttgcctccagtttgtcctgtacctgaaacagtt 41709915  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  41709916 ttacaaatcaaacact 41709931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 5968930 - 5968857
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  5968930 gtacgtgggataaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttttgtcctgtcccttgcctc 5968857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 14005110 - 14005033
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  14005110 gtacgtgggacaaaaagttgtgttgtggtttggtgatggacaaaaatatgagtttttgtcttgtcccttgcctccagt 14005033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 30543088 - 30543011
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  30543088 gtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccattgcctccagt 30543011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 6386615 - 6386730
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |   || ||||||    ||||||||  ||||||||||    
T  6386615 gtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcttttacctccagtttgtcctatacctgaaacagtt 6386714  T
Q  112 ttataaatcaaacact 127  Q
    ||||||||||||||||    
T  6386715 ttataaatcaaacact 6386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 32303651 - 32303588
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 81  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  32303651 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgt 32303588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 37618458 - 37618344
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||    ||||| ||  ||||||||||    
T  37618458 gtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccaatttgtcctgtacctgaaacagtt 37618359  T
Q  112 ttataaatcaaacac 126  Q
    ||| |||||||||||    
T  37618358 ttacaaatcaaacac 37618344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 29611120 - 29611044
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||| | |||||||||||||| |||||||||||||    
T  29611120 tacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatttcagtttttgtcctgtcccttgcctccagt 29611044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 3251722 - 3251607
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||| ||| ||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||  ||||||||||    ||||| ||  ||||||||||    
T  3251722 gtacgtaggataaaaagttgtgatgtggtttggtgagggacaaaaatataagtttttgttctgtcgcttgcctccagtttgtcctgtacctgaaacagtt 3251623  T
Q  112 ttataaatcaaacact 127  Q
    ||||||||||||||||    
T  3251622 ttataaatcaaacact 3251607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 32020067 - 32019952
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||   |||||| ||||    ||||| ||  ||||||||||    
T  32020067 gtacgtggaacaaaaagttgtgctgtggtttggtgagggataaaaatatgagtttttgtcctaccccttgcttccagtttgtcctgtacctgaaacagtt 32019968  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  32019967 ttacaaatcaaacact 32019952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 39642922 - 39643037
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||| ||| ||||| |||||||||||||||||||||||||| ||||||| || ||| |||||||||||    ||||| ||  ||||||||||    
T  39642922 gtacgtgggacagaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagtt 39643021  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  39643022 ttaaaaatcaaacact 39643037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 40389083 - 40389194
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttat 115  Q
    |||||||||||| |||||||||||||||||||| || |||||||| |||||||||||||| | |||||||||    ||||| ||  |||||||||||||     
T  40389083 gtgggacaaaaagttgtgctgtggtttggtgagagataaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttac 40389182  T
Q  116 aaatcaaacact 127  Q
    ||||||||||||    
T  40389183 aaatcaaacact 40389194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 7394880 - 7394807
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    ||||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  7394880 gtacgtgagacaaaaagttgtgttatggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctc 7394807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 25478282 - 25478359
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||| |||||| ||||| |||||||    
T  25478282 gtacgtaggacaaaaagttgtgctgtgatttgatgagggacaaaaatatgagtttttttcctgtcccttgtctccagt 25478359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 31732111 - 31732176
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  31732111 gacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctc 31732176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 22999296 - 22999412
Alignment:
Q  18 gtacgtgggacaaaaaa-ttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagt 110  Q
    ||||||||||||||||| || |||| ||||||| |||||||||||||||| ||||||||||||||  ||||||||||    ||||| ||  |||||||||    
T  22999296 gtacgtgggacaaaaaagttttgctatggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagt 22999395  T
Q  111 tttataaatcaaacact 127  Q
    |||| ||||||||||||    
T  22999396 tttacaaatcaaacact 22999412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 17805730 - 17805845
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    ||||||| |||||| | ||||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||||| |    ||||| ||  ||||||||||    
T  17805730 gtacgtgagacaaagagttgtgctttggtttggtgaggaacaaaaatatgagtttttgtcttgtcccttgcctctagtttgtcctgtacttgaaacagtt 17805829  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  17805830 ttacaaatcaaacact 17805845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 34101547 - 34101662
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||| | ||||| || || ||||||||||||||||||||||||||||||||||||  ||| |||||||||||    ||||| ||  ||||||||||    
T  34101547 gtacgtggaaaaaaaagttatgttgtggtttggtgagggacaaaaatatgagtttttgtgttgtcccttgcctccagtttgtcctgtacctgaaacagtt 34101646  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  34101647 ttacaaatcaaacact 34101662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 7591512 - 7591398
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttt 112  Q
    |||||| |||||||| ||||| ||||||||| ||||| |||||||||| ||||||||||||||  ||||||||||    ||||| ||  |||||||||||    
T  7591512 tacgtgtgacaaaaagttgtgttgtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttt 7591413  T
Q  113 tataaatcaaacact 127  Q
    || ||||||||||||    
T  7591412 tacaaatcaaacact 7591398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 45114102 - 45114164
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgc 88  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  45114102 gacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctctcccttgc 45114164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 10467103 - 10467180
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||||||||| |||||||||| |||  ||||||||||||    
T  10467103 gtacgtgggacaaaaagttgtgttgtggtttgctgaggaacaaaaatatcagtttttgtcttgtctcttgcctccagt 10467180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 15001505 - 15001582
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| | ||||||||| ||||   |||||||||||    
T  15001505 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgttctgtctattgcctccagt 15001582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 37861898 - 37861975
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| ||||||| | || || ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  37861898 gtacgtaggacaaatagttatgatgtggtttggtgagggataaaaatatgagtttttgtcctgtcacttgcctccagt 37861975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 41548657 - 41548734
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||| || ||||| |||||||||| ||||||||||||||  ||||||||||||    
T  41548657 gtacgtgggacaaaaagttgtgttgtggtctgctgaggtacaaaaatatcagtttttgtcctgtctcttgcctccagt 41548734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 12753387 - 12753332
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  12753387 gtgggacaaaaagttgtgttgtggtttggtgaggaacaaaaatatgagtttttgtc 12753332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 17520638 - 17520708
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||||| ||||| |||||||||||||||||| ||||||| |||||||| ||||| |||||||||||    
T  17520638 gtgggacaaaaagttgtgttgtggtttggtgagggac-aaaatataagtttttgccctgtcccttgcctcca 17520708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 37474756 - 37474854
Alignment:
Q  35 ttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttataaatcaaacact 127  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||  ||||||||||    ||||| ||  ||||||||||||| ||||||||||||    
T  37474756 ttgtactgtggtttgctgagggacaaaaatataagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacact 37474854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 35225709 - 35225778
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||| ||||| |||||||||| |||||||||||||   |||||||||||||| |||||||||||||    
T  35225709 gacaaaaagttgtgatgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctccagt 35225778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 16485874 - 16485803
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcct 90  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||||   ||||||||| |||| | ||||||    
T  16485874 tacgtaggacaaaaagttgtgctgtggtttggcgagggacaaaaattgcagtttttgttctgtcctttgcct 16485803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 10656752 - 10656689
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 81  Q
    ||||||| |||||||| ||||| |||||||| |||| |||||||||  | ||||||||||||||    
T  10656752 gtacgtgagacaaaaagttgtgttgtggttttgtgaaggacaaaaaattcagtttttgtcctgt 10656689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 27109607 - 27109532
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    ||||| |||||||||| ||||| ||||||||||| ||| ||||||||||  | |||| || ||| |||||||||||    
T  27109607 gtacgcgggacaaaaagttgtgttgtggtttggtaaggaacaaaaatatctgattttatcatgtcccttgcctcca 27109532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 16595215 - 16595138
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||| || | ||||||||||| |    ||||||||||||| |||||||| ||||    
T  16595215 gtacgtgggacaaaaagttgtgttgtggattagcgagggacaaaacttcatgtttttgtcctgtcccttgcctacagt 16595138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 21739218 - 21739103
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  21739218 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtt 21739119  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  21739118 ttacaaatcaaacact 21739103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 4818197 - 4818120
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4818197 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgttccttgcctccagt 4818120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 2351719 - 2351834
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    ||||||||  | ||||||||    
T  2351719 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctataccttaaacagtt 2351818  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  2351819 ttacaaatcaaacact 2351834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 7523211 - 7523326
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  7523211 gtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtt 7523310  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  7523311 ttacaaatcaaacact 7523326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 11963382 - 11963495
Alignment:
Q  20 acgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtttt 113  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    ||||| ||  ||||||||||||    
T  11963382 acgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagtttt 11963481  T
Q  114 ataaatcaaacact 127  Q
    | ||||||||||||    
T  11963482 acaaatcaaacact 11963495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 39918546 - 39918623
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39918546 gtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 39918623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 32528754 - 32528869
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    ||||| ||  ||||||||||    
T  32528754 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagtt 32528853  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  32528854 ttacaaatcaaacact 32528869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 24181680 - 24181566
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttt 112  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    ||||| ||  |||||||||||    
T  24181680 tacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttggctccagtttgtcctgtacctgaaacagttt 24181581  T
Q  113 tataaatcaaacact 127  Q
    || ||||||||||||    
T  24181580 tacaaatcaaacact 24181566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 4689755 - 4689678
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  4689755 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctccagt 4689678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 7770336 - 7770259
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  7770336 gtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgtgtttttgtcctgtcccttgcctccagt 7770259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 31770648 - 31770571
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  31770648 gtacgtgggacaaaaagttgtgttgtggtttggtgagggataaaaatatgagtttttgtcctgtcccttgcctccagt 31770571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 41790519 - 41790405
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata-tgaaacagttt 112  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||    ||||| || |||||||||||    
T  41790519 gtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtttattgcctccagtttgtcctgtactgaaacagttt 41790420  T
Q  113 tataaatcaaacact 127  Q
    || ||||||||||||    
T  41790419 tacaaatcaaacact 41790405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 553436 - 553552
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| |||  ||||||||||    ||||| ||  ||||||||||    
T  553436 gtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcttgtctcttgcctccagtttgtcctgtacttgaaacagtt 553535  T
Q  112 ttataaatcaaacacta 128  Q
    |||||||||||||||||    
T  553536 ttataaatcaaacacta 553552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 34794927 - 34794999
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34794927 tacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctc 34794999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 5571701 - 5571624
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  5571701 gtacgttggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgaatttttgtcctgtcccttgcctccagt 5571624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 5673178 - 5673255
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  5673178 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgacttgtcccttgcctccagt 5673255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 8136876 - 8136953
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8136876 gtacgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagt 8136953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 28090577 - 28090500
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  28090577 gtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagt 28090500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 35701316 - 35701393
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||| ||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35701316 gtacgtggaacaaaaagttatgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 35701393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 39788232 - 39788309
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  39788232 gtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctacagt 39788309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 40489380 - 40489453
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||    
T  40489380 gtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcccgtcccttgcctccagt 40489453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 3735396 - 3735471
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| | |||||||||    
T  3735396 gtacgtgggacaaaaagttgtgctgtggtttggtgatggacaaaaatatcagtttttgtcctgtccattgcctcca 3735471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 24036269 - 24036344
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  24036269 gtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctcca 24036344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 29241417 - 29241492
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||| ||||| |||||||||||    
T  29241417 gtacgtgggacaaaaagttgtgctgtggtttggcgagggacaaaaatatgagcttttggcctgtcccttgcctcca 29241492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 31644485 - 31644599
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||    ||||| ||  ||||||||||    
T  31644485 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtatttgtcttgct-cttgcctccagtttgtcctgtacctgaaacagtt 31644583  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  31644584 ttacaaatcaaacact 31644599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 6284355 - 6284278
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| || ||||||||||    
T  6284355 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaaaataagtttttgtcctgtcccatgcctccagt 6284278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 22493476 - 22493399
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| | ||| |||||||    
T  22493476 gtacgtgtgacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgtcctttggctccagt 22493399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 31880133 - 31880056
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| ||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  31880133 gtacgtaggacaaatagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagt 31880056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 23091360 - 23091246
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccag----tcctata--tgaaacagttt 112  Q
    |||||| |||||||| ||||| ||||||||| ||| ||||||||||||||||||||||| ||| ||||||||||||    |||| ||  |||||||||||    
T  23091360 tacgtgagacaaaaagttgtgttgtggtttgatgacggacaaaaatatgagtttttgtcttgtcccttgcctccagtttatcctgtacctgaaacagttt 23091261  T
Q  113 tataaatcaaacact 127  Q
    || ||||||||||||    
T  23091260 tacaaatcaaacact 23091246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 41459628 - 41459745
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||| || ||| |||||||||||    ||||| ||  ||||||||||    
T  41459628 gtacgtggaacaaaaagttgtgctctggtttggtgagggacaaaaatatgagttttt-tcttgtcccttgcctccagtttgtcctgtacctgaaacagtt 41459726  T
Q  112 ttataaatcaaacactaaa 130  Q
    ||| |||||||| ||||||    
T  41459727 ttacaaatcaaatactaaa 41459745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 7208287 - 7208210
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||  ||||| ||||||    
T  7208287 gtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttggttctgtctcttgcatccagt 7208210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 22432358 - 22432289
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||    
T  22432358 gacaaaaaattgtgttgtggtttgatgagggacaaaaatatcagtttttgtcctgtctcttgcctccagt 22432289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 18470485 - 18470408
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||| | |||||||||| ||| |||||||| ||||    
T  18470485 gtacgtgggataaaaagttgtgctgtggtttggtaagggacaaaaatttcagtttttgtcttgtcccttgccttcagt 18470408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 7725865 - 7725789
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||||||| ||||| ||||||||  ||| ||||||||||||||||||||||| ||| |||||| ||||||    
T  7725865 tacgtgggacaaaaagttgtgttgtggtttaatgaaggacaaaaatatgagtttttgtcatgtcccttgcatccagt 7725789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 32093038 - 32092964
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||| | |||||||||||| | | |||||||||    
T  32093038 gtacgtgggacaaaaagttgtgctgtggtttggtga-ggacaaaaatttcagtttttgtcctatcctttgcctcca 32092964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 5598519 - 5598596
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||||||| ||||| ||| ||||||||||||  ||||||||||| | |||||||||||||    
T  5598519 gtacgtgagacaaaaagttgtgctgttgtttgatgaaggacaaaaatatctgtttttgtcctctcccttgcctccagt 5598596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 700658 - 700600
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgt 76  Q
    ||||||| |||||||| ||||| ||||||||||||||| |||||||||||| |||||||    
T  700658 gtacgtgagacaaaaagttgtgttgtggtttggtgaggaacaaaaatatgaatttttgt 700600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 40182503 - 40182556
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtt 71  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  40182503 gtacatgggacaaaaagttgtgatgtggtttggtgagggacaaaaatataagtt 40182556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 37148629 - 37148569
Alignment:
Q  35 ttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| |||||||||||||| |||||||| | ||||||||||| || |||||||||||||    
T  37148629 ttgtgccgtggtttggtgaggaacaaaaatttcagtttttgtcccgtcccttgcctccagt 37148569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 8561039 - 8560980
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    |||| ||| ||||||| ||||| ||||||||||||||| |||||||||| ||||||||||    
T  8561039 gtacctggaacaaaaagttgtgatgtggtttggtgaggaacaaaaatatcagtttttgtc 8560980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 17031196 - 17031271
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    ||||||||||| |||| |||||||||| |||  |||||| ||||||| |  ||||||||||||| | |||||||||    
T  17031196 gtacgtgggacgaaaagttgtgctgtgatttaatgaggggcaaaaatttatgtttttgtcctgtcctttgcctcca 17031271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 34026707 - 34026822
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt----cctata--tgaaacagtt 111  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    ||||||  ||||||||||    
T  34026707 gtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctatacctgaaacagtt 34026806  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  34026807 ttacaaatcaaacact 34026822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 20255088 - 20255199
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttat 115  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||| ||  |||||||||||||     
T  20255088 gtgggacaagaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagtttgtcctgtacctgaaacagttttac 20255187  T
Q  116 aaatcaaacact 127  Q
    ||||||||||||    
T  20255188 aaatcaaacact 20255199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 42636448 - 42636333
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    ||||||||  | ||||||||    
T  42636448 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgttctgtcccttgcctccagtttgtcctatacctaaaacagtt 42636349  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  42636348 ttacaaatcaaacact 42636333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 51259825 - 51259710
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  51259825 gtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtt 51259726  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  51259725 ttacaaatcaaacact 51259710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 20609693 - 20609616
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  20609693 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgccaccagt 20609616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 24571321 - 24571398
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24571321 gtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 24571398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 47958477 - 47958400
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47958477 gtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 47958400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 2135110 - 2135225
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |    ||||| ||  ||||||||||    
T  2135110 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgttctgtcccttgcctctagtttgtcctgtacctgaaacagtt 2135209  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  2135210 ttacaaatcaaacact 2135225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 12349216 - 12349101
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  12349216 gtacgtgggacataaagttgtgctgtggtttggtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtt 12349117  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  12349116 ttacaaatcaaacact 12349101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 28675830 - 28675945
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||    ||||| ||  ||||||||||    
T  28675830 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcccttgcctccagtttgtcctgtacctgaaacagtt 28675929  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  28675930 ttacaaatcaaacact 28675945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 29584915 - 29585030
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||    ||||| ||  ||||||||||    
T  29584915 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacctgaaacagtt 29585014  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  29585015 ttacaaatcaaacact 29585030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 1344752 - 1344675
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  1344752 gtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttctgtcctgtcccttgcctccagt 1344675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 21221405 - 21221328
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21221405 gtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 21221328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 44116979 - 44117056
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  44116979 gtacgtgggacaaaaagttgtgcagtggtttgatgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 44117056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 49748956 - 49748782
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||| | |||||||||    ||||| ||  ||||||||||    
T  49748956 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcatgtcctttgcctccagtttgtcctgtacctgaaacagtt 49748857  T
Q  112 ttataaatcaaacactaa--------agttgttccatcctat-cttcattttttagcaattcaaacgcactcata 177  Q
    ||| ||||||||||||||        |||||||| ||||||| ||||||||| |||||| |||||||||| ||||    
T  49748856 ttacaaatcaaacactaaacaacttgagttgttctatcctatccttcattttctagcaaatcaaacgcacccata 49748782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 21373970 - 21374086
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |    ||||| ||  ||||||||||    
T  21373970 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctcaagtttgtcctgtacctgaaacagtt 21374069  T
Q  112 ttataaatcaaacacta 128  Q
    ||| |||||||||||||    
T  21374070 ttacaaatcaaacacta 21374086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 25860466 - 25860351
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||    ||||| ||  ||||||||||    
T  25860466 gtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagtt 25860367  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  25860366 ttacaaatcaaacact 25860351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 51296628 - 51296698
Alignment:
Q  25 ggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  51296628 ggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctccagt 51296698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 3864720 - 3864643
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| | |||||||||||    
T  3864720 gtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagtttttgtcctgtcctttgcctccagt 3864643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 19906802 - 19906879
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||    
T  19906802 gtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgcctccagt 19906879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 25927372 - 25927295
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  25927372 gtacgtgggacaaaaagttgtgttgtgttttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 25927295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 39052883 - 39052806
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  39052883 gtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcctgtccattgcctccagt 39052806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 40094543 - 40094620
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||  ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40094543 gtacgtgaaacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 40094620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 51925253 - 51925176
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||    
T  51925253 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccagt 51925176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 3964328 - 3964403
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  3964328 gtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtccagttccttgcctcca 3964403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 38213394 - 38213509
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||  ||||||||||    ||||||||  ||||||| ||    
T  38213394 gtacgtgggacaaaaagttgtgttgtggtttcgtgagtgacaaaaatatgagtttttgtcctgtctcttgcctccagattgtcctatacctgaaacaatt 38213493  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  38213494 ttacaaatcaaacact 38213509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 29646106 - 29646183
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||  ||||||||||| | |||||||||||||    
T  29646106 gtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatatgtttttgtcctatcccttgcctccagt 29646183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 50678838 - 50678915
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  50678838 gtacgtgagacaaaaagttgtgttgtggtttggtgagagacaaaaatatcagtttttgtcctgttctttgcctccagt 50678915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 53557840 - 53557763
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||| | |||||||||||    
T  53557840 gtacgtgagacaaaaagttgtgcagtggtttggtgagggacaaaactatgagtttttgtcctgtccattgcctccagt 53557763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 31883067 - 31882952
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||| ||||| |||||||||| |||||||||| |||  ||||||||||    ||||| ||  ||||||||||    
T  31883067 gtacgtgggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtcgtgtctcttgcctccagtttgtcctgtacctgaaacagtt 31882968  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  31882967 ttacaaatcaaacact 31882952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 4851501 - 4851428
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||  ||||||||||||||||| |||||||||||    
T  4851501 gtacgtgggacaaaaagttgtgttgtgggttggtgagggacaaaa--atgagtttttgtcctgtcccttgcctcca 4851428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 54622841 - 54622771
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgc 88  Q
    |||||||||| ||||| ||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||    
T  54622841 gtacgtgggataaaaagttgtgttgtggtttcgtgagcgacaaaaatatgagtttttgtcctgtcccttgc 54622771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 33364823 - 33364746
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||||  ||||||||||||    
T  33364823 gtacgtgagacaaaaagttgtgatgtggtttgctgaggggcaaaaatatcagtttttgtcctgtctcttgcctccagt 33364746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 26282431 - 26282355
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||| ||  ||| ||||||||    
T  26282431 tacgtgggacaaaaagttgtgctgtggtttgatgagagacaaaaatataagtttttgtcccgtctcttacctccagt 26282355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 50386501 - 50386385
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||| ||||||||| ||||||||||||||| ||||| |||||||||| | |||||||| |||  ||||||||||    ||||| ||  ||||||||||    
T  50386501 gtacgtaggacaaaaagttgtgctgtggtttgttgaggcacaaaaatatcaatttttgtcatgtctcttgcctccagtttgtcctgtacctgaaacagtt 50386402  T
Q  112 ttataaatcaaacacta 128  Q
    ||| |||||||||||||    
T  50386401 ttacaaatcaaacacta 50386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 3867694 - 3867617
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||| | || ||||||| |||  |||| |||||||    
T  3867694 gtacgtaggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcaggttttgtcatgtctcttgtctccagt 3867617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 52300481 - 52300553
Alignment:
Q  23 tgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||||||| | ||||||||||||| |||||||||| | |||||||||||||| |||| ||| ||||    
T  52300481 tgggacaaaaaattgcgttgtggtttggtgatggacaaaaatttcagtttttgtcctgtcccttacctgcagt 52300553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 5442331 - 5442376
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaa 63  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||    
T  5442331 gtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaa 5442376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 6179467 - 6179543
Alignment:
Q  20 acgtgggacaaaaaattgtgctgtggtttggtga-gggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||| |||||||| |||||||||||||||| || |||||||||||   |||||||||||||| |||| ||||||||    
T  6179467 acgtgtgacaaaaagttgtgctgtggtttggcgaggggacaaaaattacagtttttgtcctgtcccttacctccagt 6179543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 25954498 - 25954549
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    |||||||| |||||||||  ||||||||| ||||||||||||||||||||||    
T  25954498 gacaaaaagttgtgctgtaatttggtgagagacaaaaatatgagtttttgtc 25954549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 44000301 - 44000346
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaa 63  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||    
T  44000301 gtacgtgggacaaaaaattgtgatgtggtttagtgagggaaaaaaa 44000346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 41683075 - 41682983
Alignment:
Q  41 tgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttataaatcaaacact 127  Q
    ||||||||| |||||||||||| ||| |||||||||| |||  ||||||||||    ||||| ||  ||||||||||||| ||||||||||||    
T  41683075 tgtggtttgctgagggacaaaagtatcagtttttgtcttgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacact 41682983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 24721529 - 24721602
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| ||||| ||||| ||||||||| ||||| || ||||| | |||||||||||||| | || ||||||||    
T  24721529 gtgggataaaaagttgtgttgtggtttgttgaggtaccaaaattttagtttttgtcctgtcctttacctccagt 24721602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 45690921 - 45690876
Alignment:
Q  48 tggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||| |||||||| |||||||||||||| | |||||||||    
T  45690921 tggtgagggagaaaaatatcagtttttgtcctgtcctttgcctcca 45690876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 22484787 - 22484711
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||||||| ||||| ||| ||||||  ||| ||||||||   || ||||||| ||| |||||||||||||    
T  22484787 tacgtgggacaaaaagttgtgttgtagtttggcaaggaacaaaaattgtagcttttgtcatgtcccttgcctccagt 22484711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 1351561 - 1351446
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||| ||  ||||||||||    
T  1351561 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagtttgtcctgtacctgaaacagtt 1351462  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  1351461 ttacaaatcaaacact 1351446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 844850 - 844735
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    ||||| ||  ||||||||||    
T  844850 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagtt 844751  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  844750 ttacaaatcaaacact 844735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 6711172 - 6711057
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |    ||||| ||  ||||||||||    
T  6711172 gtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagtt 6711073  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  6711072 ttacaaatcaaacact 6711057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 30105806 - 30105691
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  30105806 gtacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctttacctgaaacagtt 30105707  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  30105706 ttacaaatcaaacact 30105691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 32270401 - 32270516
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  32270401 gtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctctacctgaaacagtt 32270500  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  32270501 ttacaaatcaaacact 32270516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 12890286 - 12890363
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  12890286 gtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 12890363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 16386902 - 16387017
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |    ||||| ||  ||||||||||    
T  16386902 gtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagtt 16387001  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  16387002 ttacaaatcaaacact 16387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 32289470 - 32289355
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    ||||| ||  ||||||||||    
T  32289470 gtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccaatttgtcctgtacctgaaacagtt 32289371  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  32289370 ttacaaatcaaacact 32289355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 35387437 - 35387322
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    ||||| ||  ||||||||||    
T  35387437 gtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttacctccagtttgtcctgtacctgaaacagtt 35387338  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  35387337 ttacaaatcaaacact 35387322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 45491001 - 45490886
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||    ||||| ||  ||||||||||    
T  45491001 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacttgaaacagtt 45490902  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  45490901 ttacaaatcaaacact 45490886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 51264543 - 51264658
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||    ||||| ||  ||||||||||    
T  51264543 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagtt 51264642  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  51264643 ttacaaatcaaacact 51264658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 26118340 - 26118226
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttt 112  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||    ||||| ||  |||||||||||    
T  26118340 tacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttt 26118241  T
Q  113 tataaatcaaacact 127  Q
    || ||||||||||||    
T  26118240 tacaaatcaaacact 26118226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 17887996 - 17888073
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  17887996 gtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 17888073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 42510573 - 42510650
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  42510573 gtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaatatgagtttttgtcctgtcccttgtctccagt 42510650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 44738168 - 44738093
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  44738168 gtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttggtcctgtcccttgcctcca 44738093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 7183966 - 7184043
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  7183966 gtacgtaggacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 7184043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 16437410 - 16437483
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  16437410 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctc 16437483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 16451179 - 16451252
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  16451179 gtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagt 16451252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 28340429 - 28340352
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  28340429 gtacgtgagacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttgtcttgtcccttgcctccagt 28340352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 16476281 - 16476166
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| |||||| || |    ||||| ||  ||||||||||    
T  16476281 gtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagtttttatcctgtcccttgcatctagtttgtcctgtacctgaaacagtt 16476182  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  16476181 ttacaaatcaaacact 16476166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 31004180 - 31004295
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| || ||||||||    ||||| ||  ||||||||||    
T  31004180 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaacatcagtttttgtcctgtcccgtgcctccagtttgtcctgtacctgaaacagtt 31004279  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  31004280 ttacaaatcaaacact 31004295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 41972959 - 41973074
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcc--tatatgaaacagtt 111  Q
    ||||||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||| ||| |||||||||||    ||||  ||| ||||||||||    
T  41972959 gtacgtgagacaaaaagttgtagtgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtatctgaaacagtt 41973058  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  41973059 ttacaaatcaaacact 41973074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 24339765 - 24339687
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggttt-ggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24339765 gtacgtgggaaaaaaagttgtgttgtggttttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 24339687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 39281942 - 39282012
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgc 88  Q
    |||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39281942 gtacgtaggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgc 39282012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 6029427 - 6029350
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||||||||| |||||||| ||||    
T  6029427 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgccttcagt 6029350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 17327767 - 17327698
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  17327767 gacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcccttgactccagt 17327698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 26764921 - 26764844
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||| | |||||||||||    
T  26764921 gtacgtgggacaaaaagttgtgttgtggttcggtgagggacaaaaatataagtttttgtcctgtcctttgcctccagt 26764844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 50540392 - 50540469
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||| ||| |||||||||||||||||| |||||||| |||||||||||||    
T  50540392 gtacgtgggacaaaaagttgtgttgtggtttgatgaaggacaaaaatatgagtttatgtcctgtcccttgcctccagt 50540469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 5109783 - 5109851
Alignment:
Q  25 ggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  5109783 ggacaaaaagttgtgatgtggtttggtgagggacaaaaacatgagtttttgtcctgtcccttgcctcca 5109851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 11772754 - 11772682
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccag 94  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||    
T  11772754 gtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttgtcttgtcctttgcctccag 11772682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 49303480 - 49303365
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||| |||||    ||| ||||  ||||||||||    
T  49303480 gtacgtaggataaaaaattgtgctgtggtttggtgaaggacaaaaatatgagtttttctcttgtcccttgtctccagtttgtcttatacctgaaacagtt 49303381  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  49303380 ttacaaatcaaacact 49303365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 3414980 - 3414903
Alignment:
Q  17 agtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccag 94  Q
    ||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  3414980 agtacgtgggataaaaaattatgatgtagtttggtgagggacaaaaatatgagtttttgtcctgtccctcgtctccag 3414903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 50304701 - 50304814
Alignment:
Q  20 acgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtttt 113  Q
    ||||| |||||||| |||||||||||||||  ||||||||||||||| |||||||||| |||| ||||||||||    ||||| ||  ||||||||||||    
T  50304701 acgtgagacaaaaagttgtgctgtggtttgcagagggacaaaaatatcagtttttgtcttgtttcttgcctccagtttgtcctgtacctgaaacagtttt 50304800  T
Q  114 ataaatcaaacact 127  Q
    | ||||||||||||    
T  50304801 acaaatcaaacact 50304814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 10384415 - 10384474
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  10384415 gtacgtgggacaaaaagttgtgctgtggtttagtgaaggacaaaaatatgagtttttgtc 10384474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 13994193 - 13994126
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||| ||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  13994193 gacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtccagttccttgcctcca 13994126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 42512896 - 42512781
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||| ||||||||| ||||| ||||||||| ||||| |||||||||| ||||||||||||||  ||||||||||    ||||| ||  ||||||||||    
T  42512896 gtacgtaggacaaaaagttgtgttgtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagtt 42512797  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  42512796 ttacaaatcaaacact 42512781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 50382529 - 50382455
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcc 92  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||| | |||||||||||||| | ||||||||    
T  50382529 gtacgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatttcagtttttgtcctgtccattgcctcc 50382455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 41967975 - 41967902
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    ||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||| |||  ||||||||    
T  41967975 gtacgtgagacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtcttgtctcttgcctc 41967902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 25539907 - 25539975
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcct 90  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||| | ||||||    
T  25539907 gtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcttgtcctttgcct 25539975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 42705364 - 42705308
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagttttt 74  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||    
T  42705364 gtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 42705308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 1601225 - 1601296
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| ||||| ||||||||||||||||||||||  |||||||||||| || | |||||||||||||    
T  1601225 gtgggacaaaaagttgtgttgtggtttggtgagggacaaaa--atgagtttttgttctatcccttgcctccagt 1601296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 23799661 - 23799604
Alignment:
Q  20 acgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    ||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  23799661 acgtgcgataaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttgtc 23799604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 45658873 - 45658946
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||| ||| | ||| |||||||    
T  45658873 gtgggacaaaaagttgtgttgtggtttggtgagcgacaaaaatatcagtttttgtcttgtcctttgtctccagt 45658946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 51703285 - 51703213
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| ||||| ||||||| ||||||| |||||||||||||||||||| |||| |||||||| ||||    
T  51703285 gtgggacaaaaagttgtgttgtggtt-ggtgaggaacaaaaatatgagtttttgttctgtcccttgccttcagt 51703213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 6144111 - 6144035
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||| ||||| ||||| |||||||||  |||||||||||||   |||||||||||||| |||||||||||||    
T  6144111 tacgtgggagaaaaagttgtgttgtggtttgccgagggacaaaaattgcagtttttgtcctgtcccttgcctccagt 6144035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 20495005 - 20494957
Alignment:
Q  47 ttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  20495005 ttggtgatggacaaaaatatgagtttttgtcctgtcccttgcctccagt 20494957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 38087122 - 38087063
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    |||| ||||||||||| ||||| |||||||| |||| |||||||||||||||||||||||    
T  38087122 gtacttgggacaaaaagttgtgatgtggtttagtgaaggacaaaaatatgagtttttgtc 38087063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 38663180 - 38663227
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaata 65  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  38663180 gtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaata 38663227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 46154982 - 46155032
Alignment:
Q  45 gtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||    
T  46154982 gtttggtgagggacaaaaatatgagtttttgtcctgtccctcacctccagt 46155032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 16704782 - 16704851
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| | ||||| ||||||||||| ||||||||||||||  ||||||||| ||| |||||||||||||    
T  16704782 gacaaagagttgtgatgtggtttggtaagggacaaaaatatatgtttttgtcgtgtcccttgcctccagt 16704851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 15540008 - 15539939
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||| |||||||||||||||||||  ||||||| | | || |||||||||||  ||||||||||||    
T  15540008 gacaaaaagttgtgctgtggtttggtgaaagacaaaagtttcaggttttgtcctgtctcttgcctccagt 15539939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 504513 - 504444
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||||||||||||| | |||||| ||||| ||||||| | | |||||||||  ||| |||||||||    
T  504513 gtgggacaaaaaattgtgttatggtttagtgagagacaaaattttcagtttttgtgttgtcccttgcctc 504444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 25343335 - 25343274
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcct 79  Q
    ||||||| |||||||| |||| || |||||| |||| ||||||||||||| |||||| ||||    
T  25343335 gtacgtgcgacaaaaagttgtactatggtttagtgaaggacaaaaatatgtgtttttatcct 25343274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 24002381 - 24002458
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24002381 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 24002458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 56154663 - 56154832
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccag----tcctata--tgaaacagtt 111  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    |||| ||  ||||||||||    
T  56154663 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgttctgtcccttgcctccagtttttcctgtacctgaaacagtt 56154762  T
Q  112 ttataaatcaaac--------actaaagttgttccatcct-atcttcattttttagcaattcaaacgcac 172  Q
    ||| |||||||||        |||||||||||||  |||| | |||||||||||||||| ||||||||||    
T  56154763 ttacaaatcaaacactggacaactaaagttgttctgtcctaaccttcattttttagcaaatcaaacgcac 56154832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 38812562 - 38812677
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  38812562 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtt 38812661  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  38812662 ttacaaatcaaacact 38812677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 9512384 - 9512307
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  9512384 gtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttttgtcctgttacttgcctccagt 9512307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 20802575 - 20802405
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||    ||||| ||  ||||||||||    
T  20802575 gtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagtt 20802476  T
Q  112 ttataaatcaaac--------actaaagttgttccatcctat-cttcattttttagcaattcaaacgcact 173  Q
    ||| |||||||||        |||||||||||||  |||||| |||||||||||| ||| |||||||||||    
T  20802475 ttacaaatcaaacactggataactaaagttgttctgtcctatccttcattttttaacaaatcaaacgcact 20802405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 36885974 - 36886051
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36885974 gtacgtgggataaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 36886051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 52319365 - 52319442
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  52319365 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttcgtcctgtcccttgcctccagt 52319442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 33177073 - 33176961
Alignment:
Q  21 cgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtttta 114  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||| ||  |||||||||||||    
T  33177073 cgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtttta 33176974  T
Q  115 taaatcaaacact 127  Q
     ||||||||||||    
T  33176973 caaatcaaacact 33176961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 24210361 - 24210525
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  24210361 gtacgtgggataaaaagttgtgctgtggtttggtgagggacaataatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtt 24210460  T
Q  112 ttataaatcaaacac--------taaagttgttccatcctatc-ttcattttttagcaattcaaa 167  Q
    ||| |||||||||||        || ||||||||| ||||||| ||||||||||||||| |||||    
T  24210461 ttacaaatcaaacaccggacaattagagttgttccgtcctatctttcattttttagcaaatcaaa 24210525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 33552886 - 33552771
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||    ||||| ||  ||||||||||    
T  33552886 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcatccaatttgtcctgtacctgaaacagtt 33552787  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  33552786 ttacaaatcaaacact 33552771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 46680554 - 46680439
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    ||||| ||  ||||||||||    
T  46680554 gtacgtgagacaaaaagttgtgctgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagtt 46680455  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  46680454 ttacaaatcaaacact 46680439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 6776621 - 6776695
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6776621 tacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcca 6776695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 55593927 - 55594004
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  55593927 gtacgtgggataaaaagttgtgctgtggtttggtgagggactaaaatatgagtttttgtcctgtcccttgcctccagt 55594004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 1231353 - 1231522
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccag----tcctata--tgaaacagtt 111  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||    |||| ||  ||||||||||    
T  1231353 gtacgtgggacaaaaagttgtgctgtggttttgtgagggacaaaaatatgagtttttgtccagtctcttgcctccagtttatcctgtacctgaaacagtt 1231452  T
Q  112 ttataaatcaaac--------actaaagttgttccatcctat-cttcattttttagcaattcaaacgcac 172  Q
    ||| |||||||||        |||| ||||||||  |||||| |||||||||||||||| ||||||||||    
T  1231453 ttacaaatcaaacactggacaactagagttgttctgtcctatccttcattttttagcaaatcaaacgcac 1231522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 21580068 - 21580143
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21580068 gtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcca 21580143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 23521922 - 23522037
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| | |||||| ||||    ||||| ||  ||||||||||    
T  23521922 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcccttgcttccagtttgtcctgtacctgaaacagtt 23522021  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  23522022 ttacaaatcaaacact 23522037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 32181305 - 32181420
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||| || |    ||||| ||  ||||||||||    
T  32181305 gtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcatctagtttgtcctgtacttgaaacagtt 32181404  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  32181405 ttacaaatcaaacact 32181420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 38486293 - 38486186
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccag----tcctata--tgaaacagttttataaat 119  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    |||| ||  ||||||||||||| ||||    
T  38486293 gacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttatcctgtacctgaaacagttttacaaat 38486194  T
Q  120 caaacact 127  Q
    ||||||||    
T  38486193 caaacact 38486186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 43641141 - 43641204
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 81  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43641141 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 43641204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 55065377 - 55065306
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcc 89  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55065377 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcc 55065306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 2725170 - 2725100
Alignment:
Q  25 ggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2725170 ggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagt 2725100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 53200688 - 53200610
Alignment:
Q  18 gtacgtgggacaaaaaa-ttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||    
T  53200688 gtacgtgggacaaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcatgttccttgcctccagt 53200610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 3649678 - 3649755
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||| |||||||| ||||    
T  3649678 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaattttagtttttgtcctgtcccttgccttcagt 3649755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 16320561 - 16320638
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  16320561 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttatcctgtcccttgcctccagt 16320638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 21202781 - 21202858
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  21202781 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaattatgagtttttgtcctgtctcttgcctccagt 21202858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 36743732 - 36743655
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  36743732 gtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaatatgaatttttgtcatgtcccttgcctccagt 36743655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 50727957 - 50727880
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||    
T  50727957 gtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttttgtcctgtcccttgccttcagt 50727880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 50735971 - 50735894
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||    
T  50735971 gtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttttgtcctgtcccttgccttcagt 50735894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 34929962 - 34930034
Alignment:
Q  23 tgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  34929962 tggggcaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttttgtcctgtcccttgcctccagt 34930034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 29785581 - 29785466
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||    ||||| ||  ||||||||||    
T  29785581 gtacgtgggacaaaaagctgtgttgtggtttggtgagggacaaaaatatgagtttttgttctgtcccttgtctccagtttgtcctgtacctgaaacagtt 29785482  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  29785481 ttacaaatcaaacact 29785466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 54543032 - 54543106
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  54543032 gtacgtgggacaaaag-ttgtgctatggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcca 54543106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 2787006 - 2787083
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||||||||| |||||| ||||||    
T  2787006 gtacgtgggacaaaaatttgtgatgtggtttagtgaaggacaaaaatatgagtttttgtcctgtcccttgcatccagt 2787083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 41711889 - 41711966
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| |||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  41711889 gtacgtgagacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtctttgtcctgtcccttgccttcagt 41711966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 49152144 - 49152067
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  49152144 gtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcgtgtcccttgcatccagt 49152067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 52949762 - 52949839
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||    
T  52949762 gtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagt 52949839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 36497266 - 36497374
Alignment:
Q  25 ggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttataaa 118  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  |||| |||||    ||||| ||  ||||||||||||| |||    
T  36497266 ggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgtctccagtttgtcctgtacctgaaacagttttacaaa 36497365  T
Q  119 tcaaacact 127  Q
    |||||||||    
T  36497366 tcaaacact 36497374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 44324386 - 44324326
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcc 78  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  44324386 gtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttgtcc 44324326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 50178537 - 50178421
Alignment:
Q  18 gtacgtgggacaaaaaa-ttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagt 110  Q
    ||||||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||||||||||  ||||||||||    ||||| ||  |||||||||    
T  50178537 gtacgtgggacaaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagt 50178438  T
Q  111 tttataaatcaaacact 127  Q
    |||| ||||||||||||    
T  50178437 tttacaaatcaaacact 50178421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 4325833 - 4325910
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| || ||||| ||||| ||||||||||||||||||| |||||| |||||||||||||    
T  4325833 gtacgtgggacaaaaagttgtgttgcggttttgtgagagacaaaaatatgagtttttctcctgtcccttgcctccagt 4325910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 20518066 - 20517989
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  20518066 gtacgtgggacaagaagttatgctgtgatttggtgagggacaaaaatatgactttttgtcctgtctcttgcctccagt 20517989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 20694413 - 20694490
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  20694413 gtacgttggacaaaaagttgcgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgccttcagt 20694490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 26083385 - 26083458
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| || ||||||||||||||||||||||||||| | |||||||||| ||| |||||||||||||    
T  26083385 gtgggacaaaaagttatgctgtggtttggtgagggacaaaaatttcagtttttgtcatgtcccttgcctccagt 26083458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 28115298 - 28115371
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| | ||||| |||||| |||||||||||||    
T  28115298 gtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcaatttttctcctgtcccttgcctccagt 28115371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 44649208 - 44649131
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||| ||||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||    
T  44649208 gtacatgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagt 44649131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 23327960 - 23328024
Alignment:
Q  18 gtacgtgggacaaaaaa-ttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 81  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  23327960 gtacgtgggacaaaaaagttgtgttgtggtttgctgagggacaaaaatatgagtttttgtcctgt 23328024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 37865795 - 37865871
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccag 94  Q
    |||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| |||  |||||||||||    
T  37865795 gtacatgggacaaaaagttgtgttgtgatttggtgagggacaaaaatatgagtttttgtcatgtctcttgcctccag 37865871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 42870030 - 42870090
Alignment:
Q  35 ttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||    
T  42870030 ttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcccccagt 42870090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 11056084 - 11056199
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||| ||||||| ||| ||||| ||||||||||| |||||||||||||| |||||||||| ||| |||||||||||    ||||| ||  ||||||||||    
T  11056084 gtacatgggacataaagttgtgttgtggtttggtaagggacaaaaatatcagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagtt 11056183  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  11056184 ttacaaatcaaacact 11056199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 29592941 - 29593052
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttat 115  Q
    |||||||||||| |||||||||||||| |||| | ||||||||||||||||||||| ||| |||||| ||||    ||||| ||  |||||||||||||     
T  29592941 gtgggacaaaaagttgtgctgtggtttagtgaagtacaaaaatatgagtttttgtcatgtcccttgcatccagtttgtcctgtacctgaaacagttttac 29593040  T
Q  116 aaatcaaacact 127  Q
    ||||||||||||    
T  29593041 aaatcaaacact 29593052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 42772832 - 42772903
Alignment:
Q  20 acgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| |||  ||||||||    
T  42772832 acgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatatgagtttttgtcttgtctcttgcctc 42772903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 12600928 - 12601005
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| ||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||  |||||||    
T  12600928 gtacgtgagacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttttgtcttgtcccttatctccagt 12601005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 29616212 - 29616284
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||      ||||||||||||||||||||||||||||| |||||||||||||    
T  29616212 gtacgtgggacaaaaagttgtgctgtggtc-----agggacaaaaatatgagtttttgtcctgtcccttgcctccagt 29616284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 50186574 - 50186643
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||||||||||| ||| || |||||||||    
T  50186574 gtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttatcccgtcccttgcctc 50186643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 50729586 - 50729509
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    ||||||| |||||||| |||||||||||||||||||  ||||||||| | |||||||||| ||| |||||||||||||    
T  50729586 gtacgtgagacaaaaagttgtgctgtggtttggtgatagacaaaaatttcagtttttgtcatgtcccttgcctccagt 50729509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 25978647 - 25978580
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||| ||||| | |||||||||||||||||||||| | |||||||||||||||| |||||||||    
T  25978647 gacaaaaagttgtgatatggtttggtgagggacaaaaatttcagtttttgtcctgttcattgcctcca 25978580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 37695585 - 37695526
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||    
T  37695585 gtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatcagtttttgtc 37695526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 37931969 - 37932020
Alignment:
Q  25 ggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgt 76  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  37931969 ggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgt 37932020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 2629995 - 2629881
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    ||||||| |||||||| ||||| | |||| |||||||||||||||||||||||||||||| ||| | ||||||| |    ||||| ||  ||||||||||    
T  2629995 gtacgtgagacaaaaagttgtgatttggtctggtgagggacaaaaatatgagtttttgtcatgtcctttgcctctagtttgtcctgtacctgaaacagtt 2629896  T
Q  112 ttataaatcaaacac 126  Q
    ||| |||||||||||    
T  2629895 ttacaaatcaaacac 2629881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 39078703 - 39078780
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||| | || ||||||||| |  ||||||||||||    
T  39078703 gtacgtaggacaaaaatttgtgttgtggtttggtgagggacaaaaatttcaggttttgtcctatctcttgcctccagt 39078780  T

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Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 47642535 - 47642458
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||||| || |||  ||| ||||||||    
T  47642535 gtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttatcttgtctcttacctccagt 47642458  T

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Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 47361450 - 47361343
Alignment:
Q  25 ggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcc----agtcctata--tgaaacagttttataaa 118  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||  ||||||| ||| ||||||||||     ||||| ||  ||||||||||||| |||    
T  47361450 ggacaaaaagttgtgttgtggtttggtgagggacaaaaatatga-attttgtcttgtcccttgcctccggtttgtcctgtacctgaaacagttttacaaa 47361352  T
Q  119 tcaaacact 127  Q
    |||||||||    
T  47361351 tcaaacact 47361343  T

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Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 6973946 - 6973788
Alignment:
Q  29 aaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcc----agtcc--tatatgaaacagttttataaatcaa 122  Q
    ||||| ||||| |||||||||| ||||||||||| ||||||||||||||||||   ||||||||     ||||  ||  ||||||||||||| |||||||    
T  6973946 aaaaagttgtgttgtggtttggcgagggacaaaattatgagtttttgtcctgtcaattgcctcccgtttgtccagtacctgaaacagttttacaaatcaa 6973847  T
Q  123 acact--------aaagttgttccatcctat-cttcattttttagcaattcaaacgcac 172  Q
    |||||        |||||||||| ||||| | |||||||||||||||| ||||||||||    
T  6973846 acactggacaacaaaagttgttctatcctgtccttcattttttagcaaatcaaacgcac 6973788  T

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Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 38520544 - 38520584
Alignment:
Q  21 cgtgggacaaaaaattgtgctgtggtttggtgagggacaaa 61  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  38520544 cgtgggacaaaaaattatgctgtggtttggtgagggacaaa 38520584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 52673854 - 52673930
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||| |||||||||||||| || ||||| ||||||||||||||| |  ||||||||| ||| ||||| |||||||    
T  52673854 tacgtgagacaaaaaattgtgttgaggtttagtgagggacaaaaatttctgtttttgtcatgtcccttgactccagt 52673930  T

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Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 9807198 - 9807260
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 81  Q
    |||||| ||||||||| |||| |||||||||||||| |||||||||  ||||||||||||||||    
T  9807198 gtacgtaggacaaaaagttgtactgtggtttggtga-ggacaaaaagttgagtttttgtcctgt 9807260  T

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Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 14296645 - 14296724
Alignment:
Q  54 gggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttataaatcaaacact 127  Q
    |||||||||||||||||||||||||||| ||||||||| |    ||||||||  ||||||| ||||| ||||||||||||    
T  14296645 gggacaaaaatatgagtttttgtcctgtcccttgcctcaagtttgtcctatacctgaaacaattttacaaatcaaacact 14296724  T

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Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 14314893 - 14314972
Alignment:
Q  54 gggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttataaatcaaacact 127  Q
    |||||||||||||||||||||||||||| ||||||||| |    ||||||||  ||||||| ||||| ||||||||||||    
T  14314893 gggacaaaaatatgagtttttgtcctgtcccttgcctcaagtttgtcctatacctgaaacaattttacaaatcaaacact 14314972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 22318420 - 22318351
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||| ||||| |||||||||||||||||||||||| | |  |||||||||||  ||||||| ||||    
T  22318420 gacaaaaagttgtgttgtggtttggtgagggacaaaaatttcaaattttgtcctgtctcttgccttcagt 22318351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 56487288 - 56487161
Alignment:
Q  56 gacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagttttataaatcaaac---actaaagttgttccatcctatc 146  Q
    ||||||||||| | |||||||||||| ||||||||| |    ||||||||  ||||||||||||| |||||||||   |||| ||||||||  || | ||    
T  56487288 gacaaaaatataaatttttgtcctgtcccttgcctcaagtttgtcctatatctgaaacagttttacaaatcaaacacaactagagttgttctgtcatgtc 56487189  T
Q  147 -ttcattttttagcaattcaaacgcact 173  Q
     ||||||||||||||| |||||||||||    
T  56487188 tttcattttttagcaaatcaaacgcact 56487161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 7001903 - 7001967
Alignment:
Q  27 acaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctc 91  Q
    ||||||| ||||| |||||||||||||||||||||||| |  |||||||| ||||  ||||||||    
T  7001903 acaaaaagttgtgttgtggtttggtgagggacaaaaatttttgtttttgttctgtctcttgcctc 7001967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 43739507 - 43739562
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    |||||||||||  ||||| |||||||||||||||||||| ||| | ||||||||||    
T  43739507 gtgggacaaaatgttgtgttgtggtttggtgagggacaataatttcagtttttgtc 43739562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 7555001 - 7554945
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagttttt 74  Q
    ||||||| |||||||| ||||| | |||||| |||| ||||||||||| ||||||||    
T  7555001 gtacgtgagacaaaaagttgtgttatggtttagtgaaggacaaaaatacgagttttt 7554945  T

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Target: scaffold0169 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 18111 - 18036
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18111 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcca 18036  T

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Target: scaffold0169; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 12593 - 12530
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgt 81  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  12593 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgt 12530  T

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Target: scaffold0729 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 4635 - 4561
Alignment:
Q  19 tacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4635 tacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcca 4561  T

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Target: scaffold0054 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 23614 - 23729
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |    ||||| ||  ||||||||||    
T  23614 gtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttttgtcatgtcccttgcctcaagtttgtcctgtacctgaaacagtt 23713  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  23714 ttacaaatcaaacact 23729  T

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Target: scaffold0014 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 101988 - 102103
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcc--tatatgaaacagtt 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| | |||||||||    ||||  || |||||||||||    
T  101988 gtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcatgtccgttgcctccaagttgtcctgtacatgaaacagtt 102087  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  102088 ttacaaatcaaacact 102103  T

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Target: scaffold0650 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 1700 - 1585
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctat--atgaaacagtt 111  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||||| ||| |||||||||||    |||||||   ||||||||||    
T  1700 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcttgtcccttgcctccagtttgtcctatccttgaaacagtt 1601  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  1600 ttacaaatcaaacact 1585  T

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Target: scaffold0027 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 15211 - 15326
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca----gtcctata--tgaaacagtt 111  Q
    ||||||| |||||||| ||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||||    ||||| ||  ||||||||||    
T  15211 gtacgtgagacaaaaagttgtgttgtggtttggtgggggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagtt 15310  T
Q  112 ttataaatcaaacact 127  Q
    ||| ||||||||||||    
T  15311 ttacaaatcaaacact 15326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 19147 - 19071
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  19147 gtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgag-ttttgtcctgtctcttgcctccagt 19071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 51478 - 51554
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||||    
T  51478 gtacgtgggacaaaaagttgtgctgtggtttg-tgagggacaaaaatatgagtttttgtcttgtcccttgcatccagt 51554  T

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Target: scaffold0025 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 5493 - 5419
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgag-tttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| | |||||||||||| |||||||||||||    
T  5493 gtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgtgttttttgtcctgtcccttgcctccagt 5419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 13740 - 13667
Alignment:
Q  22 gtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||| | |||||||||||||    
T  13740 gtgggacaaaaagttgtactgtggtttggtgagggacaaaaatttcagtttttgtcctatcccttgcctccagt 13667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 43007 - 42930
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| ||||||||||||||||||| |||| | ||||||||| |||| |||||||||||||    
T  43007 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacacaaatttcagtttttgttctgtcccttgcctccagt 42930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 373021 - 372944
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagt 95  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| | | ||||| |||||||    
T  373021 gtacgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatatgagtttttgtcatatcccttgtctccagt 372944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 15438 - 15379
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 77  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  15438 gtacatgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 15379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 2536 - 2478
Alignment:
Q  35 ttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcca 93  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||| |||| ||||||    
T  2536 ttgtgttgtggtttggttagggacaaagatatgagtttttgtcctgtccctttcctcca 2478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 33601 - 33530
Alignment:
Q  18 gtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcct 90  Q
    |||||||||||||||| ||||| ||||||||| |||||||||| ||| | | |||||||| ||| ||||||||    
T  33601 gtacgtgggacaaaaagttgtgttgtggtttgatgagggacaagaatttca-tttttgtcatgtcccttgcct 33530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 19205 - 19139
Alignment:
Q  26 gacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctcc 92  Q
    |||||||| ||||| || | |||| |||||||||||||| | |||||||||||||| | ||||||||    
T  19205 gacaaaaagttgtgttgagctttgatgagggacaaaaatttcagtttttgtcctgtccattgcctcc 19139  T

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