View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1627_high_3 (Length: 816)
Name: NF1627_high_3
Description: NF1627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1627_high_3 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 657; Significance: 0; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 657; E-Value: 0
Query Start/End: Original strand, 7 - 795
Target Start/End: Complemental strand, 14659457 - 14658675
Alignment:
| Q |
7 |
gtgagatgaataatccatgagaaagaagttcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgattgagttata |
106 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14659457 |
gtgagaagaataatccatgagaaagaaattcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgatttggttata |
14659358 |
T |
|
| Q |
107 |
tattgctacggctaatcttgaacctacgccatttcaatggaaccagagggaattcttgaataatattgatataaaaattgccgtttcactaatttggaat |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
14659357 |
tattgctacggctaatcttgaacctacgccatttcaatggaactagagggagttcttgaataatattgatataaaaattgccgtttcattaatttgaaat |
14659258 |
T |
|
| Q |
207 |
ttgaaataataacaagcaaatgaaaaaatactaaagagtgaaaggacagggaattgaaggagtcaaatgggtaattgaggaagtagagagattggattcg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
14659257 |
ttgaaataataacaagcaaatgaaaaaatactaaagagtgaaaggacggggaattgaaggagtggaatgggtaattgaggaagtagagagattggatccg |
14659158 |
T |
|
| Q |
307 |
gttacgagtgagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatcta |
406 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14659157 |
gtt------gagagagagaacaatgaaagagatagagttgatgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatcta |
14659064 |
T |
|
| Q |
407 |
aacattnnnnnnnttggtccatcatggaccaattcttcaattggtccaagctaaatggcacgtaataagtcttacttcttaagtgaaagtcataaatttc |
506 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
14659063 |
aacattaaaaaaattgatccatcatggaccaattcttcaattgatccaagctaaatggcacctaataagtcatacttcttaagggaaagtcataaatttc |
14658964 |
T |
|
| Q |
507 |
tacttcttatgtgaaagaatccaatatatgtctcatcaattctaataaaatttgcatggcagctccttaataacaatatttcgcatttaagaatcctaga |
606 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
14658963 |
tacttcttatgtgaaagaatccaatatatgactcatcaattctaataaaatttgcatggcagctccttaataataatatttcgcatttaagaatcctaga |
14658864 |
T |
|
| Q |
607 |
cttacaagtcttacttcttatgtgaaactctccaataatgtgacccaagagtaaccagcaacaacgtaaatgtatttatactgaaatcaattttgtagaa |
706 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
14658863 |
cttacaagtcttacttcttatgtgaaactctccaataatgtgacccaagagtaaccagcaacaatgtaaatgtatttatactgaaatcaattttgtagaa |
14658764 |
T |
|
| Q |
707 |
tcaagatcatgcaaaatcaaatttataagcatacataatgatttttagctaaaaagaatatcaattaggtcaaaagtaacttggtacta |
795 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14658763 |
tcaagatcatgcaaaatcaaatttataagcatacataatgatttttagctaaaaagaatatcaattaggtcaaaagtaacttagtacta |
14658675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 316 - 463
Target Start/End: Original strand, 13715381 - 13715528
Alignment:
| Q |
316 |
gagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnn |
415 |
Q |
| |
|
|||||| ||| ||||||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
13715381 |
gagagaaagagcaatgaaggagatagagttggtgatggcttagatagggtgtgggtagagtatgataagatttggtggattgtctaatctaaacattaaa |
13715480 |
T |
|
| Q |
416 |
nnnnttggtccatcatggaccaattcttcaattggtccaagctaaatg |
463 |
Q |
| |
|
||||| |||||||||||| |||||| | | |||||||||||||| |
|
|
| T |
13715481 |
aaaattggtgcatcatggaccatttcttctactcgtccaagctaaatg |
13715528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 316 - 463
Target Start/End: Complemental strand, 4848632 - 4848485
Alignment:
| Q |
316 |
gagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnn |
415 |
Q |
| |
|
|||||| ||| ||||||| ||||||||||||||||||||| |||| ||| ||| |||||||||||||||||| |||||| | |||||||||||||| |
|
|
| T |
4848632 |
gagagaaagagcaatgaaggagatagagttggtgatggcttagatagagtctgggtagagtatgataagatttgatggattgcctaatctaaacattaaa |
4848533 |
T |
|
| Q |
416 |
nnnnttggtccatcatggaccaattcttcaattggtccaagctaaatg |
463 |
Q |
| |
|
||| |||||||| ||||||||||||| | |||||| ||||||| |
|
|
| T |
4848532 |
aaaattgatccatcatacaccaattcttcaactagtccaaactaaatg |
4848485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 38226096 - 38226167
Alignment:
| Q |
135 |
ccatttcaatggaaccagagggaattcttgaataatattgatataaaaattgccgtttcactaatttggaat |
206 |
Q |
| |
|
||||||||||||||| ||||| | || ||||||| ||||||||||||||| | |||||||||||||||||| |
|
|
| T |
38226096 |
ccatttcaatggaactagaggaagttgttgaatagtattgatataaaaatggaagtttcactaatttggaat |
38226167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 336; Significance: 0; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 7 - 412
Target Start/End: Complemental strand, 44398678 - 44398274
Alignment:
| Q |
7 |
gtgagatgaataatccatgagaaagaagttcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgattgagttata |
106 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
44398678 |
gtgagaagaataatcgatgagaaagaagttcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttctgatttagttata |
44398579 |
T |
|
| Q |
107 |
tattgctacggctaatcttgaaccta-cgccatttcaatggaaccagagggaattcttgaataatattgatataaaaattgccgtttcactaatttggaa |
205 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44398578 |
tattgctacagctaatcttgaacctaacgccatttcaatggaatcagagggagttcttgaataatattgatataaaaattgccgtttcactaatttggaa |
44398479 |
T |
|
| Q |
206 |
tttgaaataataacaagcaaatgaaaaaatactaaagagtgaaaggacagggaattgaaggagtcaaatgggtaattgaggaagtagagagattggattc |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
44398478 |
tttgaaataataacaagcaaatgaaaaaatactaaagagtgaaaggacagggaattgaaggagtggaatgggtaattgaggaagtagagagattggatcc |
44398379 |
T |
|
| Q |
306 |
ggttacgagtgagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatct |
405 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
44398378 |
ggttactagtgaga--gagaacaatgaaagagatagagttggtaatggctaagatttagtgtggatagagtatgataagatttgatggatagtctaatct |
44398281 |
T |
|
| Q |
406 |
aaacatt |
412 |
Q |
| |
|
||||||| |
|
|
| T |
44398280 |
aaacatt |
44398274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 15 - 463
Target Start/End: Complemental strand, 6127511 - 6127073
Alignment:
| Q |
15 |
aataatccatgagaaagaagttcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgattgagttatatattgcta |
114 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6127511 |
aataatccatgagaaagaagttcctttatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgatttagttatatattgcta |
6127412 |
T |
|
| Q |
115 |
cggctaatcttgaacctacgccatttcaatggaaccagagggaattcttgaataatattgatataaaaattgccgtttcactaatttggaatttgaaata |
214 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
6127411 |
cggctaatcttgaacctacatcatttcaatggaaccagagggagttcttgaataatattgatataaaaattgccgtttcattaatttggaatttgaaata |
6127312 |
T |
|
| Q |
215 |
ataacaagcaaatgaaaaaatactaaagagtgaaaggacagggaattgaaggagtcaaatgggtaattgaggaagtagagagattggattcggttacgag |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||| |||||||||| ||| | || || || |
|
|
| T |
6127311 |
ataacaagcaaatgaaaaaatactaaagagtgaaacgacggggaattgaaggagtggaat----------agaattagagagatttgatcccgtaactag |
6127222 |
T |
|
| Q |
315 |
tgagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnn |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
6127221 |
tgagagagagaacaatgaaagagatagagttgatgatggctaagatttagtgtggatagaatatgataagatttgatggatagtctaatctaaacattaa |
6127122 |
T |
|
| Q |
415 |
nnnnnttggtccatcatggaccaattcttcaattggtccaagctaaatg |
463 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
6127121 |
aaaaattggtccatcatggaccaattcttcaattgatctaagctaaatg |
6127073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 7 - 463
Target Start/End: Complemental strand, 43811277 - 43810833
Alignment:
| Q |
7 |
gtgagatgaataatccatgagaaagaagttcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgattgagttata |
106 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
43811277 |
gtgagaagaataatccatgagaaagaagttcctctatttaagtttgggatcaatttcaactttaaatccatcaccataataattttttgatttagttata |
43811178 |
T |
|
| Q |
107 |
tattgctacggctaatcttgaaccta-cgccatttcaatggaaccagagggaattcttgaataatattgatataaaaattgccgtttcactaatttggaa |
205 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
43811177 |
tattgctacggctaatcttgaacctaacgccatttcaatggaac---------ttcttgaataatattgatataaaaactgccgtttcactaatttggaa |
43811087 |
T |
|
| Q |
206 |
tttgaaataataacaagcaaatgaaaaaatactaaagagtgaaaggacagggaattgaaggagtcaaatgggtaattgaggaagtagagagattggattc |
305 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| || | |
|
|
| T |
43811086 |
tttgaaataataacaagcaaatgaaaaaatactaaagagtgaaaggatggagaattgaaggagtggaatgggtaattgaggaagtagagagattgaatcc |
43810987 |
T |
|
| Q |
306 |
ggttacgagtgagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatct |
405 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
43810986 |
ggttactagt----gagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagttcgataagatttgatggatagtctaatct |
43810891 |
T |
|
| Q |
406 |
aaacattnnnnnnnttggtccatcatggaccaattcttcaattggtccaagctaaatg |
463 |
Q |
| |
|
||| ||| |||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
43810890 |
aaatattaaaaaaattggtccatcataaaccaattattcaattggtccaagctaaatg |
43810833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 420 - 467
Target Start/End: Original strand, 49251450 - 49251497
Alignment:
| Q |
420 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatggcac |
467 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
49251450 |
ttggtccatcatggaccaaaacttcaataggtccaagctaaatggcac |
49251497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 24626015 - 24626060
Alignment:
| Q |
420 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatggc |
465 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
24626015 |
ttggtccatcatggaccaatacctcaatgggtccaagctaaatggc |
24626060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 463
Target Start/End: Original strand, 55863268 - 55863311
Alignment:
| Q |
420 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatg |
463 |
Q |
| |
|
|||||||||||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
55863268 |
ttggtccatcatggaccaatacttcaatagatccaagctaaatg |
55863311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 420 - 466
Target Start/End: Complemental strand, 38582194 - 38582148
Alignment:
| Q |
420 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatggca |
466 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
38582194 |
ttggtccatcatggaccaatatctcaatgggtccaagctaaatggca |
38582148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 3e-35; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 316 - 461
Target Start/End: Original strand, 4785003 - 4785148
Alignment:
| Q |
316 |
gagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnn |
415 |
Q |
| |
|
|||||| ||| ||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||| |||||||||| ||||| |
|
|
| T |
4785003 |
gagagaaagagcaatgaaggagatagagttggtgatggcttagatagagtgtgggtagagtatgataagatttggtggattgtctaatctacacattaaa |
4785102 |
T |
|
| Q |
416 |
nnnnttggtccatcatggaccaattcttcaattggtccaagctaaa |
461 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4785103 |
aaaattggtccatcatggaccaattcttcaactggtccaagctaaa |
4785148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 420 - 463
Target Start/End: Complemental strand, 30151882 - 30151839
Alignment:
| Q |
420 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatg |
463 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
30151882 |
ttggtccatcatggaccaatacttcaatgggtccaagctaaatg |
30151839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 22917177 - 22917110
Alignment:
| Q |
316 |
gagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataa |
383 |
Q |
| |
|
|||||| ||| ||| ||| ||||||||||||||||||||| |||| |||||| ||||||||||||| |
|
|
| T |
22917177 |
gagagaaagagcaaggaaggagatagagttggtgatggcttagatagggtgtgggtagagtatgataa |
22917110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 327 - 463
Target Start/End: Original strand, 39773715 - 39773851
Alignment:
| Q |
327 |
caatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnnnnnnttggtcc |
426 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||| |||||| |||||||||||| ||||| ||||| |||||||||||||||| |||| || |
|
|
| T |
39773715 |
caatgaaggagatagagttggtgatggcttagatagggtgtgggtagagtatgatatgatttggtggattgtctaatctaaacattaaaaaaattggccc |
39773814 |
T |
|
| Q |
427 |
atcatggaccaattcttcaattggtccaagctaaatg |
463 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39773815 |
atcatggaccaattcttcaactggtccaagctaaatg |
39773851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 61; Significance: 9e-26; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 337 - 462
Target Start/End: Original strand, 45908165 - 45908290
Alignment:
| Q |
337 |
gatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnnnnnnttggtccatcatggacc |
436 |
Q |
| |
|
||||||||||||||||||| |||| |||||| |||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
45908165 |
gatagagttggtgatggcttagatagggtgtgggtagagtatgataagatttggtggattgtctaatctaaacattaaaaaaattggtccatcatggaca |
45908264 |
T |
|
| Q |
437 |
aattcttcaattggtccaagctaaat |
462 |
Q |
| |
|
|||| ||||| ||||||||||||||| |
|
|
| T |
45908265 |
aatttttcaactggtccaagctaaat |
45908290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 467
Target Start/End: Original strand, 44658291 - 44658338
Alignment:
| Q |
420 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatggcac |
467 |
Q |
| |
|
||||||||| ||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
44658291 |
ttggtccattatggaccaaaacttcaataggtccaagctaaatggcac |
44658338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 463
Target Start/End: Original strand, 44827634 - 44827677
Alignment:
| Q |
420 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatg |
463 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||| |||||||| |
|
|
| T |
44827634 |
ttggtccattatggaccaattcttcaataggtccatgctaaatg |
44827677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 420 - 463
Target Start/End: Complemental strand, 7694670 - 7694627
Alignment:
| Q |
420 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatg |
463 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
7694670 |
ttggtccatcatggaccaatacttcaatgggtccaagctaaatg |
7694627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 38231772 - 38231821
Alignment:
| Q |
420 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatggcacgt |
469 |
Q |
| |
|
|||||||||||||||||||| ||||||| | ||||||||||||| ||||| |
|
|
| T |
38231772 |
ttggtccatcatggaccaatacttcaatggttccaagctaaatgacacgt |
38231821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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