View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1627_low_36 (Length: 344)

Name: NF1627_low_36
Description: NF1627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1627_low_36
NF1627_low_36
[»] chr8 (40 HSPs)
chr8 (18-207)||(10108369-10108559)
chr8 (21-206)||(14820295-14820480)
chr8 (18-208)||(5554867-5555058)
chr8 (22-207)||(21148129-21148315)
chr8 (22-207)||(30789700-30789886)
chr8 (18-203)||(17623076-17623261)
chr8 (18-206)||(2583320-2583509)
chr8 (18-206)||(14767696-14767882)
chr8 (18-208)||(7689522-7689712)
chr8 (64-194)||(42112997-42113127)
chr8 (20-207)||(42113175-42113360)
chr8 (22-207)||(26136684-26136870)
chr8 (18-138)||(42605822-42605942)
chr8 (34-207)||(43481519-43481694)
chr8 (64-206)||(43851665-43851807)
chr8 (18-130)||(43851853-43851965)
chr8 (64-217)||(7689758-7689912)
chr8 (21-138)||(22494454-22494570)
chr8 (64-207)||(10108605-10108749)
chr8 (69-208)||(10171383-10171523)
chr8 (64-207)||(14820529-14820673)
chr8 (64-207)||(21147935-21148080)
chr8 (64-194)||(30789520-30789650)
chr8 (61-207)||(5555101-5555248)
chr8 (64-207)||(26136920-26137063)
chr8 (67-208)||(17622888-17623027)
chr8 (37-188)||(21144713-21144865)
chr8 (64-141)||(14767573-14767650)
chr8 (89-206)||(18044089-18044205)
chr8 (64-141)||(26532849-26532926)
chr8 (64-141)||(22494619-22494696)
chr8 (65-209)||(42605989-42606134)
chr8 (151-207)||(40486628-40486684)
chr8 (61-126)||(22848399-22848465)
chr8 (150-208)||(35367408-35367466)
chr8 (150-208)||(40487736-40487794)
chr8 (64-141)||(2583555-2583632)
chr8 (152-217)||(20877069-20877134)
chr8 (67-139)||(35368652-35368724)
chr8 (92-140)||(28977686-28977734)
[»] chr5 (40 HSPs)
chr5 (22-215)||(14143893-14144086)
chr5 (18-208)||(7126106-7126297)
chr5 (20-208)||(14411695-14411884)
chr5 (18-207)||(17762282-17762471)
chr5 (18-206)||(24837358-24837547)
chr5 (18-194)||(29444818-29444995)
chr5 (26-208)||(24074301-24074484)
chr5 (18-210)||(31799829-31800021)
chr5 (20-201)||(27159148-27159327)
chr5 (18-207)||(20709401-20709590)
chr5 (33-211)||(18336462-18336642)
chr5 (18-141)||(993935-994058)
chr5 (18-205)||(4919179-4919366)
chr5 (18-205)||(41001542-41001729)
chr5 (26-140)||(6817318-6817432)
chr5 (64-207)||(6817122-6817265)
chr5 (64-206)||(23979136-23979279)
chr5 (18-210)||(24650889-24651081)
chr5 (64-201)||(7125923-7126060)
chr5 (68-209)||(24837166-24837308)
chr5 (64-208)||(14144136-14144281)
chr5 (64-141)||(20709278-20709355)
chr5 (64-208)||(4918987-4919133)
chr5 (64-207)||(30512287-30512430)
chr5 (64-207)||(30552627-30552770)
chr5 (64-205)||(993751-993890)
chr5 (64-208)||(17762517-17762662)
chr5 (71-206)||(31799640-31799776)
chr5 (64-141)||(24074537-24074614)
chr5 (78-193)||(22571090-22571206)
chr5 (64-192)||(41001370-41001496)
chr5 (93-206)||(18336720-18336833)
chr5 (20-138)||(22571268-22571386)
chr5 (64-208)||(14411901-14412045)
chr5 (64-204)||(24650704-24650843)
chr5 (64-207)||(27158990-27159133)
chr5 (64-207)||(29445041-29445184)
chr5 (20-67)||(23979042-23979089)
chr5 (64-138)||(37281856-37281930)
chr5 (23-76)||(20947069-20947121)
[»] chr1 (50 HSPs)
chr1 (213-334)||(36064190-36064311)
chr1 (18-207)||(24467628-24467817)
chr1 (20-212)||(18462280-18462472)
chr1 (18-206)||(39711074-39711261)
chr1 (18-208)||(17606302-17606497)
chr1 (18-206)||(4907151-4907340)
chr1 (22-206)||(8292804-8292989)
chr1 (22-207)||(52058204-52058387)
chr1 (18-208)||(29696563-29696752)
chr1 (27-207)||(30299231-30299411)
chr1 (18-129)||(20995747-20995858)
chr1 (18-141)||(43539413-43539536)
chr1 (18-206)||(39826239-39826424)
chr1 (18-216)||(33628879-33629078)
chr1 (20-206)||(34749297-34749483)
chr1 (18-141)||(48072027-48072150)
chr1 (23-206)||(39970839-39971024)
chr1 (18-201)||(42510203-42510388)
chr1 (22-124)||(13229815-13229917)
chr1 (64-207)||(4906961-4907105)
chr1 (64-207)||(39711307-39711451)
chr1 (64-207)||(34749137-34749280)
chr1 (64-206)||(42510015-42510157)
chr1 (64-208)||(48072196-48072341)
chr1 (64-207)||(39826049-39826193)
chr1 (64-206)||(52058011-52058154)
chr1 (64-207)||(17606543-17606685)
chr1 (64-208)||(33628688-33628833)
chr1 (20-140)||(16294138-16294258)
chr1 (64-207)||(20995903-20996046)
chr1 (64-207)||(8293042-8293187)
chr1 (64-141)||(24467862-24467939)
chr1 (65-207)||(29696794-29696936)
chr1 (64-137)||(7473862-7473935)
chr1 (64-207)||(18462519-18462663)
chr1 (150-213)||(20995691-20995754)
chr1 (64-206)||(30299466-30299609)
chr1 (35-121)||(30780270-30780356)
chr1 (64-141)||(39970712-39970789)
chr1 (66-206)||(17501967-17502107)
chr1 (71-206)||(18342261-18342395)
chr1 (64-122)||(13229966-13230024)
chr1 (150-208)||(17500767-17500825)
chr1 (92-209)||(30252161-30252281)
chr1 (164-208)||(27039636-27039680)
chr1 (152-219)||(37236705-37236772)
chr1 (64-135)||(43539582-43539653)
chr1 (150-207)||(43539669-43539726)
chr1 (22-124)||(7473985-7474083)
chr1 (156-208)||(16294047-16294099)
[»] chr7 (45 HSPs)
chr7 (18-207)||(41600147-41600337)
chr7 (18-208)||(12006729-12006920)
chr7 (18-208)||(28218352-28218543)
chr7 (22-209)||(23383693-23383881)
chr7 (18-206)||(23704662-23704850)
chr7 (22-210)||(20963688-20963875)
chr7 (18-206)||(20419725-20419915)
chr7 (22-208)||(48672472-48672659)
chr7 (18-206)||(6465855-6466043)
chr7 (20-208)||(25772523-25772711)
chr7 (22-217)||(20458884-20459079)
chr7 (23-206)||(38879918-38880099)
chr7 (18-194)||(1250395-1250572)
chr7 (64-208)||(23704896-23705040)
chr7 (18-138)||(31851428-31851548)
chr7 (22-205)||(7658162-7658342)
chr7 (20-204)||(48648421-48648603)
chr7 (65-207)||(28218177-28218321)
chr7 (64-208)||(12006539-12006683)
chr7 (22-141)||(10409440-10409559)
chr7 (64-206)||(38879723-38879867)
chr7 (64-206)||(20419536-20419679)
chr7 (64-207)||(25772363-25772506)
chr7 (64-207)||(10409609-10409752)
chr7 (59-206)||(16995200-16995347)
chr7 (22-136)||(44817028-44817142)
chr7 (64-208)||(20458690-20458834)
chr7 (65-203)||(7657972-7658113)
chr7 (64-205)||(48648263-48648404)
chr7 (64-141)||(24195031-24195108)
chr7 (22-104)||(33162638-33162720)
chr7 (64-208)||(48672275-48672422)
chr7 (64-206)||(23383499-23383643)
chr7 (64-205)||(31851242-31851382)
chr7 (64-141)||(44816901-44816978)
chr7 (64-206)||(41599958-41600101)
chr7 (154-206)||(24195198-24195250)
chr7 (64-207)||(33162770-33162915)
chr7 (64-141)||(20963561-20963638)
chr7 (150-208)||(14646972-14647030)
chr7 (92-129)||(20419695-20419732)
chr7 (92-129)||(20963654-20963691)
chr7 (93-141)||(24194929-24194978)
chr7 (64-140)||(1250273-1250349)
chr7 (167-207)||(31852169-31852209)
[»] scaffold0809 (2 HSPs)
scaffold0809 (22-207)||(1410-1595)
scaffold0809 (64-207)||(1645-1785)
[»] chr6 (32 HSPs)
chr6 (18-206)||(9481182-9481371)
chr6 (20-207)||(32017696-32017882)
chr6 (24-134)||(10321926-10322036)
chr6 (20-208)||(24731933-24732125)
chr6 (26-207)||(30617966-30618142)
chr6 (20-141)||(33637625-33637746)
chr6 (22-183)||(3230056-3230217)
chr6 (64-207)||(18500314-18500457)
chr6 (22-135)||(30459094-30459207)
chr6 (18-203)||(26385467-26385649)
chr6 (22-208)||(2299503-2299693)
chr6 (64-207)||(24732173-24732316)
chr6 (18-123)||(18500536-18500641)
chr6 (64-194)||(10321745-10321873)
chr6 (68-206)||(26385278-26385417)
chr6 (64-140)||(9854122-9854198)
chr6 (64-130)||(33637763-33637829)
chr6 (64-194)||(33714495-33714630)
chr6 (64-140)||(14680949-14681025)
chr6 (78-205)||(19284130-19284258)
chr6 (18-76)||(33714676-33714734)
chr6 (64-141)||(30458967-30459044)
chr6 (154-210)||(18500655-18500711)
chr6 (97-201)||(9154884-9154990)
chr6 (22-140)||(14681075-14681193)
chr6 (86-140)||(17142744-17142798)
chr6 (64-141)||(9481417-9481494)
chr6 (18-122)||(17142827-17142930)
chr6 (150-210)||(21070859-21070919)
chr6 (64-140)||(30618196-30618272)
chr6 (64-124)||(32017619-32017679)
chr6 (150-206)||(21069514-21069570)
[»] chr4 (58 HSPs)
chr4 (20-203)||(3018014-3018199)
chr4 (26-194)||(15640728-15640896)
chr4 (18-207)||(46046613-46046802)
chr4 (22-209)||(13132134-13132320)
chr4 (18-203)||(9396702-9396888)
chr4 (22-208)||(3273619-3273807)
chr4 (18-208)||(38574157-38574348)
chr4 (18-215)||(9516799-9516997)
chr4 (22-207)||(37012900-37013085)
chr4 (18-141)||(34064171-34064294)
chr4 (22-181)||(4355907-4356066)
chr4 (18-204)||(9618982-9619168)
chr4 (21-207)||(31090253-31090440)
chr4 (20-138)||(26252337-26252455)
chr4 (22-208)||(31943948-31944135)
chr4 (22-141)||(18713026-18713145)
chr4 (20-205)||(35376164-35376346)
chr4 (23-201)||(48580060-48580239)
chr4 (22-141)||(7819080-7819199)
chr4 (64-207)||(38573968-38574111)
chr4 (18-121)||(18667375-18667478)
chr4 (64-208)||(9396934-9397078)
chr4 (39-206)||(41947066-41947232)
chr4 (64-205)||(9516611-9516753)
chr4 (64-209)||(46046427-46046567)
chr4 (64-206)||(3273855-3273996)
chr4 (64-206)||(31090060-31090204)
chr4 (68-207)||(9619218-9619358)
chr4 (64-205)||(15640950-15641093)
chr4 (64-204)||(48259986-48260126)
chr4 (64-206)||(26252472-26252615)
chr4 (64-211)||(3018247-3018393)
chr4 (68-203)||(35376367-35376502)
chr4 (64-203)||(13131943-13132084)
chr4 (64-201)||(37012712-37012850)
chr4 (150-209)||(31218303-31218362)
chr4 (64-205)||(34063983-34064125)
chr4 (64-137)||(7819249-7819322)
chr4 (64-216)||(31944185-31944338)
chr4 (151-214)||(41946957-41947020)
chr4 (64-201)||(4356116-4356253)
chr4 (66-207)||(36888917-36889057)
chr4 (64-141)||(48579932-48580009)
chr4 (64-219)||(18713195-18713353)
chr4 (165-219)||(18667627-18667681)
chr4 (67-209)||(20069538-20069679)
chr4 (150-207)||(48259822-48259879)
chr4 (66-201)||(43312214-43312350)
chr4 (96-207)||(12904746-12904857)
chr4 (150-206)||(43313533-43313589)
chr4 (152-219)||(12520624-12520691)
chr4 (165-208)||(50462733-50462776)
chr4 (165-207)||(31082184-31082226)
chr4 (150-207)||(36887679-36887736)
chr4 (17-50)||(48259908-48259941)
chr4 (164-216)||(7819005-7819057)
chr4 (92-128)||(9396882-9396918)
chr4 (64-136)||(18667524-18667596)
[»] chr3 (58 HSPs)
chr3 (18-207)||(45969914-45970104)
chr3 (18-206)||(5800605-5800794)
chr3 (18-208)||(14171775-14171966)
chr3 (18-207)||(14262225-14262415)
chr3 (18-206)||(14161871-14162060)
chr3 (22-207)||(30500234-30500419)
chr3 (22-208)||(9267168-9267354)
chr3 (18-206)||(19112954-19113143)
chr3 (18-208)||(33372404-33372595)
chr3 (18-216)||(45003486-45003685)
chr3 (22-207)||(21632900-21633081)
chr3 (33-205)||(52552892-52553065)
chr3 (18-207)||(16721990-16722180)
chr3 (18-216)||(35995867-35996063)
chr3 (18-208)||(49986525-49986717)
chr3 (18-206)||(15328463-15328649)
chr3 (18-207)||(11003731-11003921)
chr3 (18-208)||(43572387-43572580)
chr3 (18-208)||(20853885-20854075)
chr3 (64-207)||(9266974-9267118)
chr3 (64-207)||(14171586-14171729)
chr3 (22-208)||(38283548-38283735)
chr3 (22-207)||(17465560-17465746)
chr3 (41-209)||(17649222-17649390)
chr3 (64-206)||(4204709-4204851)
chr3 (64-210)||(19112760-19112908)
chr3 (18-207)||(47575461-47575650)
chr3 (64-207)||(30500042-30500184)
chr3 (61-208)||(43572623-43572770)
chr3 (64-217)||(33372640-33372793)
chr3 (64-208)||(16722226-16722371)
chr3 (64-208)||(35995676-35995821)
chr3 (18-120)||(4204897-4204999)
chr3 (64-206)||(14162106-14162248)
chr3 (64-192)||(45003731-45003859)
chr3 (64-207)||(20853694-20853839)
chr3 (64-214)||(49986763-49986914)
chr3 (64-207)||(14262035-14262179)
chr3 (64-206)||(5800840-5800982)
chr3 (64-208)||(21633131-21633276)
chr3 (64-140)||(38283785-38283861)
chr3 (108-206)||(19720333-19720432)
chr3 (64-207)||(45970150-45970295)
chr3 (64-141)||(15328695-15328772)
chr3 (67-207)||(35741823-35741963)
chr3 (150-212)||(27946187-27946249)
chr3 (66-207)||(32998371-32998511)
chr3 (92-209)||(36990923-36991040)
chr3 (92-209)||(37016363-37016480)
chr3 (64-141)||(52552758-52552835)
chr3 (67-206)||(35740817-35740955)
chr3 (150-201)||(27946114-27946165)
chr3 (64-208)||(17465365-17465511)
chr3 (64-141)||(47575339-47575415)
chr3 (153-209)||(3425973-3426029)
chr3 (150-207)||(3424773-3424830)
chr3 (92-129)||(52552851-52552888)
chr3 (151-207)||(24490242-24490298)
[»] chr2 (48 HSPs)
chr2 (22-194)||(26135829-26136002)
chr2 (18-207)||(22263380-22263572)
chr2 (18-207)||(19251470-19251659)
chr2 (18-206)||(42670908-42671097)
chr2 (24-207)||(17850781-17850965)
chr2 (18-208)||(20498745-20498934)
chr2 (18-205)||(26560743-26560932)
chr2 (20-208)||(26236125-26236313)
chr2 (18-140)||(23854855-23854977)
chr2 (18-206)||(15106067-15106256)
chr2 (18-194)||(17463104-17463280)
chr2 (20-137)||(23806022-23806139)
chr2 (20-207)||(39878102-39878289)
chr2 (64-208)||(19251705-19251849)
chr2 (18-193)||(33290062-33290238)
chr2 (18-137)||(13284597-13284716)
chr2 (64-206)||(17850587-17850729)
chr2 (64-206)||(23806187-23806330)
chr2 (64-207)||(26236330-26236473)
chr2 (64-206)||(15106302-15106443)
chr2 (64-207)||(17463326-17463470)
chr2 (64-208)||(26560554-26560697)
chr2 (68-206)||(34548574-34548712)
chr2 (64-194)||(22263204-22263334)
chr2 (64-141)||(20498980-20499057)
chr2 (78-208)||(13254495-13254626)
chr2 (64-194)||(30390471-30390602)
chr2 (98-206)||(23854688-23854797)
chr2 (66-207)||(30959909-30960050)
chr2 (64-129)||(39878337-39878402)
chr2 (64-130)||(13284485-13284551)
chr2 (66-207)||(12418960-12419101)
chr2 (66-207)||(12431020-12431161)
chr2 (64-206)||(26136052-26136195)
chr2 (75-206)||(42670717-42670851)
chr2 (64-207)||(33290284-33290426)
chr2 (164-206)||(23855030-23855072)
chr2 (150-206)||(30958684-30958740)
chr2 (150-203)||(13254758-13254811)
chr2 (164-209)||(23047918-23047963)
chr2 (70-126)||(13254677-13254733)
chr2 (164-208)||(13284410-13284454)
chr2 (164-208)||(23046705-23046749)
chr2 (86-129)||(13284561-13284604)
chr2 (101-219)||(44098894-44099013)
chr2 (92-134)||(26236272-26236314)
chr2 (92-134)||(30390618-30390660)
chr2 (150-194)||(13284735-13284779)
[»] scaffold0361 (2 HSPs)
scaffold0361 (18-207)||(4561-4752)
scaffold0361 (64-208)||(4798-4942)
[»] scaffold0449 (2 HSPs)
scaffold0449 (20-207)||(7390-7579)
scaffold0449 (92-205)||(7227-7341)
[»] scaffold0141 (2 HSPs)
scaffold0141 (22-208)||(8323-8508)
scaffold0141 (64-206)||(8557-8700)
[»] scaffold0176 (1 HSPs)
scaffold0176 (18-208)||(15822-16008)
[»] scaffold0185 (2 HSPs)
scaffold0185 (18-140)||(4058-4180)
scaffold0185 (66-208)||(3867-4010)
[»] scaffold0117 (1 HSPs)
scaffold0117 (64-201)||(12217-12355)
[»] scaffold0881 (2 HSPs)
scaffold0881 (18-123)||(409-513)
scaffold0881 (64-141)||(286-363)
[»] scaffold0352 (2 HSPs)
scaffold0352 (92-209)||(5941-6060)
scaffold0352 (67-208)||(4665-4807)
[»] scaffold0477 (2 HSPs)
scaffold0477 (64-207)||(4983-5125)
scaffold0477 (154-208)||(4878-4932)
[»] scaffold0157 (1 HSPs)
scaffold0157 (152-219)||(226-293)


Alignment Details
Target: chr8 (Bit Score: 131; Significance: 6e-68; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 10108559 - 10108369
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10108559 acagggaccaaaagtgggacgaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatga 10108460  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||| ||||||||||         ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||    
T  10108459 aattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccct 10108369  T

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Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 206
Target Start/End: Complemental strand, 14820480 - 14820295
Alignment:
Q  21 gggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaat 120  Q
    |||| ||||| | |||| |||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  14820480 gggagcaaaactaggagaaatctgaaattacagggacgtaatttatgcagattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaat 14820381  T
Q  121 tacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    |||||||||| ||||||||||        ||||| ||||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  14820380 tacagggacaaaatctaaatcttttttttacaggaactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 14820295  T

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Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 5555058 - 5554867
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||| | ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  5555058 acagggaccaaaactaggaggaatctgaaattccagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatatga 5554959  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||| ||||||| ||||| ||||         ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  5554958 aattatagggacaaaatctgaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttacccta 5554867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 21148129 - 21148315
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  21148129 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacatgatgaaaggagggactaaaagtggaagaatatgaaatt 21148228  T
Q  122 acagggacataatctaa-atcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||| ||||| |||||||  |         ||||||||||| | |||||||| |||||||||||| ||||||||| ||||||||||||    
T  21148229 acaaggacaaaatctaattttttttttttacagggactaaaaccggaattcactaatattacagagacgaaaagaggtatttaccct 21148315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 30789700 - 30789886
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||||||| |||||||||||||||| || |||||||||||| |||||| |||||||    
T  30789700 ggaccaaaagtgggaggaatatgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaacgatggaccaaaagtggaagaatctgaaatt 30789799  T
Q  122 acagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||| ||||||||||         ||||||||||| | |||||||  |||||||||||||||||||||| ||||||||||||    
T  30789800 acagggacaaaatctaaatctttttatttacagggactaaaaccggaatttactaatattacagggacgaaaagaggtatttaccct 30789886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 17623076 - 17623261
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||||||||||||| |||||||| | |||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||    
T  17623076 acagggaccaaaagtgggaggaatttgaaattacagggacataatttatgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatttga 17623175  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtattta 203  Q
    ||||||| ||||| ||||||||||        ||||| ||||| | | ||||| |||||||||||||||| |||||| ||||||||    
T  17623176 aattacaaggacaaaatctaaatcttttttttacaggcactaaaaccagaattggctaatattacagggatgaaaagaggtattta 17623261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 2583509 - 2583320
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||  ||    
T  2583509 acagggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggatcaaaagtagaagaatccga 2583410  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||| ||||||||||         ||| | ||||| |||| ||||||||||||||||||| | |||||| |||||||||||    
T  2583409 aattacagggacaaaatctaaatcttttattttacaagaactaaaatcgaaattcgctaatattacaggaatgaaaagaggtatttaccc 2583320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 14767696 - 14767882
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||||  ||| || ||||||||||    
T  14767696 acagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatga 14767795  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||| ||||||| |         ||||||||||| | || ||||  ||||||||||||| |||||||| |||||||||||    
T  14767796 aattacagggacaaaatctaatt--tttttttacagggactaaaaacgaaatttactaatattacaggaacgaaaagaggtatttaccc 14767882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 7689712 - 7689522
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| ||| || ||||||||| ||||||||||||||| |||||| |||    
T  7689712 acagggactaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgccgatgtgatgaaaagagggaccaaaagtggaagaatctga 7689613  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||| ||||| ||||||||||         ||| |||||||   || |||||||||||||||||||||||||||| |||||||||||||    
T  7689612 aattacaaggaca-aatctaaatctttttatttacaaggactaaagccgaaattcgctaatattacagggacgaaaagaggtatttacccta 7689522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 42113127 - 42112997
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||||||||||||||||||        ||||||||||| ||    
T  42113127 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtgaaagaatcttaaattacagggacataatctaaatcttttttttacagggactaaaat 42113028  T
Q  164 cggaattcgctaatattacagggacgaaaag 194  Q
    |||||||||||||||||||||||||||||||    
T  42113027 cggaattcgctaatattacagggacgaaaag 42112997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 42113175 - 42113360
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    |||||||||||||||||||||| |||||||| | |||| ||||||||||||| | ||||||| ||||||||||||||| |||||||| |||||| |||||    
T  42113175 agggaccaaaagtgggaggaatatgaaattacagggacataatttatgcagaatttgctgacatgatgaaaggagggatcaaaagtggaagaatttgaaa 42113274  T
Q  120 ttacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||| ||||||||||||||| |         ||||| ||||| | || |||||| |||||||||||||||||||||  |||||||||||    
T  42113275 ttaaagggacataatctaatt--tttttttacaggaactaaaaccgaaattcgttaatattacagggacgaaaagatgtatttaccct 42113360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 26136870 - 26136684
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||||||| |||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||| | ||||| || |||||| |||||||    
T  26136870 ggaccaaaagtgggagaaatctgaaattacagggacgtaatttatgcagattatgctgacttgatgaaaggaggaatcaaaattggaagaatctgaaatt 26136771  T
Q  122 acagggacataatctaaa-tcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||| ||||| |||||||| |         ||||||||||| |  ||||||||||||||||||||| |||||||| |||||| |||||    
T  26136770 acaaggacaaaatctaaatttttttttttacagggactaaaactggaattcgctaatattacaggaacgaaaagaggtattcaccct 26136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 42605942 - 42605822
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||| ||||||||| ||||||||| |||||||| | |||||||||||||||| ||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  42605942 acagcgaccaaaagcgggaggaatttgaaattacagggacgtaatttatgcatattctactgacgtgattaaaggagggaccaaaagtggaagaatatga 42605843  T
Q  118 aattacagggacataatctaa 138  Q
    ||||||||||| | |||||||    
T  42605842 aattacagggataaaatctaa 42605822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 34 - 207
Target Start/End: Original strand, 43481519 - 43481694
Alignment:
Q  34 ggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataa 133  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||  |||||| |||| |||||| |||||||||||||||| ||    
T  43481519 ggaggaatctgaaattacaaggacgtaatttatgcagattgtgctgacgtgattaaaggaaagaccaagagtggaagaatttgaaattacagggacaaaa 43481618  T
Q  134 tctaaatc--nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    | ||||||          |||| |||||| | ||||||||||||||||||||| ||||||||| | ||||||||||    
T  43481619 tttaaatcttttttttttacagagactaaaaccggaattcgctaatattacagtgacgaaaagagatatttaccct 43481694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 43851807 - 43851665
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||| ||| || || |||||| |||||||| |||||| |||||||||||||||| ||||||||||        ||||||||||| |     
T  43851807 tatgcagattctgctgatgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttgtttacagggactaaaac 43851708  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  43851707 cggaattcgctaatattacagggacgaaaagaggtatttaccc 43851665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 43851853 - 43851965
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||||||||||||| ||||||| |||||| |      
T  43851853 acagggaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcaaattttgctgacgtgatgaaaggagggacaaaaagtggaagaatcttg 43851952  T
Q  118 aattacagggaca 130  Q
    |||||||| ||||    
T  43851953 aattacagagaca 43851965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 217
Target Start/End: Original strand, 7689758 - 7689912
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnn-acagggactaata 162  Q
    ||||||||||||||||||||| || || |||||| |||||||| |||||| |||||||||||||||| ||| ||||||         ||| ||||||| |    
T  7689758 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttttacacggactaaaa 7689857  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttata 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||| | |||||||    
T  7689858 tcggaattcgctaatattacagggacgaaaagaggtatttaccctttaatttata 7689912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 22494570 - 22494454
Alignment:
Q  21 gggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaat 120  Q
    |||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||||||| ||| || ||||||||| || |||||||||||||    
T  22494570 gggaccaaaagtaggaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgattaaa-gaaggaccaaaaatggaagaatatgaaat 22494472  T
Q  121 tacagggacataatctaa 138  Q
    |||||| ||| |||||||    
T  22494471 tacaggaacaaaatctaa 22494454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 10108605 - 10108749
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||||||||| || ||  |||||||||||||| ||||||||||||||||||||||| ||||||||||         ||||||||||| |    
T  10108605 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 10108704  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
     ||||||| ||||||||||||||||||||||| |||||| |||||    
T  10108705 ccggaatttgctaatattacagggacgaaaagaggtattaaccct 10108749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 69 - 208
Target Start/End: Original strand, 10171383 - 10171523
Alignment:
Q  69 agattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat-cnnnnnnnnacagggactaatatcgga 167  Q
    ||||||||||||| ||||| || |||||||||||||||||||||| | |||||||||||||| |||||||||          ||||||||||| | ||||    
T  10171383 agattctgctgacatgatggaatgagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaaatagttttttttacagggactaaaaccgga 10171482  T
Q  168 attcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  10171483 attcgctaatattacagggacgaaaagcggtatttacccta 10171523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 14820529 - 14820673
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||||||||| || ||  |||||||||||||| ||||||||||||||||||||||| ||||||||||         ||||||||||| |    
T  14820529 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 14820628  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
     ||||||||||||||||||||||||| ||||| |||||| |||||    
T  14820629 ccggaattcgctaatattacagggactaaaagaggtattaaccct 14820673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 21148080 - 21147935
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaat 161  Q
    ||||||||||||||||||||| || ||  |||||||||||||| |||||| |||||||||||||||| ||||||||||          |||||||||||     
T  21148080 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaa 21147981  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    | ||||||||||||||||||||||||| ||||| |||||| |||||    
T  21147980 accggaattcgctaatattacagggacaaaaagaggtattaaccct 21147935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 30789650 - 30789520
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||||||| |||| ||||| ||||| |||||| |||||||| | |||| ||||||||||| |||| ||||||||||        ||||||||||| ||    
T  30789650 tatgcagattttgctaacgtggtgaaatgagggatcaaaagtggaggaatctgaaattacagagacaaaatctaaatcttttttttacagggactaaaat 30789551  T
Q  164 cggaattcgctaatattacagggacgaaaag 194  Q
    |||||||||||||||||||||||||||||||    
T  30789550 cggaattcgctaatattacagggacgaaaag 30789520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 207
Target Start/End: Original strand, 5555101 - 5555248
Alignment:
Q  61 atttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggacta 159  Q
    ||||||||||||| ||||||| || || ||  |||||||||||||| ||||||||||||||||||||||| ||||||||||         |||| |||||    
T  5555101 atttatgcagattttgctgacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagagacta 5555200  T
Q  160 atatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    | | || |||||||||||||||||||||||||||| ||| || |||||    
T  5555201 aaaccgaaattcgctaatattacagggacgaaaagaggtgttaaccct 5555248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 26136920 - 26137063
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || ||||||||||||||| |||||| |||||||||||||||| ||||||| |           ||||||||| |     
T  26136920 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaattttttttttactagggactaaaac 26137019  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
     | ||||| |||||||||||||||||||||||||||||||||||    
T  26137020 tgaaattcactaatattacagggacgaaaagtggtatttaccct 26137063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 17623027 - 17622888
Alignment:
Q  67 gcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcgg 166  Q
    |||||||||||||||||| || || ||||||||||||||| |||||| | |||||||||  ||| ||||||||||        ||||||||||| |  |     
T  17623027 gcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacaga-acaaaatctaaatcttttttt-acagggactaaaactga 17622930  T
Q  167 aattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  17622929 aattcgctaatattacaaggacgaaaagaggtatttacccta 17622888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 188
Target Start/End: Original strand, 21144713 - 21144865
Alignment:
Q  37 ggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatct 136  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||||| | |||  |||||| |||| || | |||| |||||||||| ||||| |||||    
T  21144713 ggaatctcaaattacagggacgtaatttatgcagattctgctgacgtggttaaataagggacgaaaaatggaggaatctgaaattacaaggacaaaatct 21144812  T
Q  137 aaa-tcnnnnnnnnacagggactaatatcggaattcgctaatattacagggac 188  Q
    ||| |         | ||||||||| ||||||||||| |||||||||||||||    
T  21144813 aaattttttattttatagggactaaaatcggaattcgttaatattacagggac 21144865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 14767650 - 14767573
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||||||||||||| || ||  |||||||||||||| || ||| |||||||||||||||| ||||||||||    
T  14767650 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatc 14767573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 18044089 - 18044205
Alignment:
Q  89 aaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggac 188  Q
    ||||||||| |||||| |||||||| |||||||||||||||| ||| ||| |         ||| ||||||| | |||||||||||||||||||||||||    
T  18044089 aaggagggatcaaaagcgaaagaatctgaaattacagggacaaaatataatt-atttttttacatggactaaaaccggaattcgctaatattacagggac 18044187  T
Q  189 gaaaagtggtatttaccc 206  Q
    |||||| |||||||||||    
T  18044188 gaaaagaggtatttaccc 18044205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 26532926 - 26532849
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||||||||||||| || || |||||| |||||||| || ||| |||||||||||||||| ||||||||||    
T  26532926 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaaaaatttgaaattacagggacaaaatctaaatc 26532849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 22494619 - 22494696
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    |||||| |||||||| ||||| || || ||||||||||||||| |||||| |||||||||||||||| | ||||||||    
T  22494619 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatttgaaattacagggacaaattctaaatc 22494696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 42605989 - 42606134
Alignment:
Q  65 atgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaatat 163  Q
    ||||| |||||||| ||||| || ||  | |||||||||||| |||||| ||||||||| |||||| ||||||||||         |||  |||||| |     
T  42605989 atgcaaattctgcttacgtggtggaataatggaccaaaagtggaagaatttgaaattacggggacaaaatctaaatctttttttttacattgactaaaac 42606088  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccctat 209  Q
    | ||||||||||||||||||||||| ||||| | ||||||||||||    
T  42606089 cagaattcgctaatattacagggacaaaaagagatatttaccctat 42606134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 40486684 - 40486628
Alignment:
Q  151 cagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||| ||||| |||||    
T  40486684 cagggactaaaatcggaattcgttaatattacagggaccaaaagtagtattaaccct 40486628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 22848465 - 22848399
Alignment:
Q  61 atttatgcagattctgctgacgtga-tgaaaggagggaccaaaagtgaaagaatatgaaattacagg 126  Q
    |||||||||||||||  |||||||  ||||| |||||||||||| ||||||||| ||||||||||||    
T  22848465 atttatgcagattcttttgacgtgggtgaaacgagggaccaaaaatgaaagaatctgaaattacagg 22848399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 35367466 - 35367408
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||| ||| | ||||||||||||||||| ||||||| ||||| |||||||||||||    
T  35367466 acagggattaaaaccggaattcgctaatattgcagggaccaaaagaggtatttacccta 35367408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 40487736 - 40487794
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||| |  ||||||||||||||||||| |||| |||||||||||| ||||||    
T  40487736 acagggactaaaactggaattcgctaatattacaaggaccaaaagtggtattaacccta 40487794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 2583555 - 2583632
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||| ||||| ||| || || |||| |||||||||| |||||| |||||||| ||||||| ||| ||||||    
T  2583555 tatgcagattcggctgatgtggtggaatgaggaaccaaaagtggaagaatctgaaattatagggacaaaatttaaatc 2583632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 20877069 - 20877134
Alignment:
Q  152 agggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttata 217  Q
    ||||||||| | ||||||||||| ||||||||||||| ||||| |||||| ||||| || ||||||    
T  20877069 agggactaaaaccggaattcgctcatattacagggaccaaaagaggtattaacccttttttttata 20877134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 35368652 - 35368724
Alignment:
Q  67 gcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaa 139  Q
    |||||||||||||||  ||| ||  |||| | |||||||||| |||| |||||||||||||||||||| ||||    
T  35368652 gcagattctgctgacaagatcaagcgaggaatcaaaagtgaaggaatctgaaattacagggacataatttaaa 35368724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 28977734 - 28977686
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat 140  Q
    ||||||||||||||| || |||||||||| | ||||||| |||||||||    
T  28977734 gagggaccaaaagtggaaaaatatgaaatgatagggacagaatctaaat 28977686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 22 - 215
Target Start/End: Complemental strand, 14144086 - 14143893
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||    
T  14144086 ggaccaaaagtggaaggaatctgaaattacagggacgtaatttatgcagattctactgacgtgatgaaatgaggtaccaaaagtggaagaatatgaaatt 14143987  T
Q  122 acagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattattta 215  Q
    ||||||||| ||||||||||        ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  14143986 acagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttacccttttattta 14143893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 7126106 - 7126297
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7126106 acagggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatga 7126205  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||| ||||||||||         |||  |||||| | |||||||||||||||||||||||| |||||| |||||||||||||    
T  7126206 aattacagggacaaaatctaaatctttttttttacaaagactaaaaccggaattcgctaatattacagggatgaaaagaggtatttacccta 7126297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 14411884 - 14411695
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  14411884 agggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaa 14411785  T
Q  120 ttacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    |||||  |||| ||| ||||||         ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  14411784 ttacatagacaaaatataaatctttttttatacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttacccta 14411695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 17762471 - 17762282
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||| ||||||||| |||||||| | ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| |||    
T  17762471 acagggaccaaaagcgggaggaatatgaaattacagggacgtaatttatgcagattctgcttacgtgattaaaggagggaccaaaagtggaagaatctga 17762372  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||| ||| ||| ||||||        ||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||    
T  17762371 aattacaggaacaaaatataaatcttttttttacagggactaaaaccggaattcgctaatattacagggacaaaaagaggtatttaccct 17762282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 24837358 - 24837547
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| |||||||  |||||| |||    
T  24837358 acagggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggagcaaaagtagaagaatttga 24837457  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||| ||||||||||         ||||||||||| |  |||||||||||||||||||||||||||||| |||||||||||    
T  24837458 aattacagggacaaaatctaaatctttttttttacagggactaaaactggaattcgctaatattacagggacgaaaagaggtatttaccc 24837547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 29444995 - 29444818
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||| | ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  29444995 acagggaccaaaactaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtagaagaatatga 29444896  T
Q  118 aattacagggacataatctaaat-cnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaag 194  Q
    ||||||| ||||||||||||||| |        ||||||||||| ||| ||||||| |||||||||||||||||||||    
T  29444895 aattacaaggacataatctaaatccttttttttacagggactaaaatcagaattcgttaatattacagggacgaaaag 29444818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 24074484 - 24074301
Alignment:
Q  26 caaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacag 125  Q
    ||||||||||| |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24074484 caaaagtgggatgaatctgaaattatggggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacag 24074385  T
Q  126 ggacataatctaaat-cnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
     |||| |||||||||          ||||||||||| | || ||||||||||||||||| |||||||||| |||||||||||||    
T  24074384 agacaaaatctaaatatttttttttacagggactaaaaccgaaattcgctaatattacatggacgaaaagaggtatttacccta 24074301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 31799829 - 31800021
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| |||||| | |||||| |||    
T  31799829 acagggaccaaaagtgggaggaatctgaaattaaagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggatcaaaagaggaagaatctga 31799928  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctatt 210  Q
    ||||||| ||||| ||||||||||         ||| ||||||| | |||||||||||||||||| |||||||||||| ||||||| |||||||    
T  31799929 aattacatggacaaaatctaaatctttttttttaca-ggactaaaaccggaattcgctaatattatagggacgaaaagaggtattttccctatt 31800021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 27159148 - 27159327
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| |||    
T  27159148 agggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaaatggaagaatataaaa 27159247  T
Q  120 ttacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatt 201  Q
    ||||||||||| |||||||||         ||| ||||||| | || ||||||||||||||||| |||||||||| ||||||    
T  27159248 ttacagggacaaaatctaaat--tttttttacaaggactaaaaccgaaattcgctaatattacaaggacgaaaagaggtatt 27159327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 20709401 - 20709590
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| ||||||||||||||||||||||||| | ||| |||||||||||| |||||||||| |||||||||||| |||| ||||||| ||||||||||    
T  20709401 acagggatcaaaagtgggaggaatctgaaattacagggatgtaatttatgcatattctgctgatgtgatgaaaggaaggacaaaaagtggaagaatatga 20709500  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||| ||||| ||||||||||        ||||||||||| | |  |||||| |||||||||| |||||||||| |||||| |||||    
T  20709501 aattacatggacaaaatctaaatcttttttttacagggactaaaaccaaaattcgttaatattacatggacgaaaagaggtattaaccct 20709590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 18336642 - 18336462
Alignment:
Q  33 gggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacata 132  Q
    |||| ||||||||||||| | |||||||||||||||| |||||||||| |||||||||||||||| |||||| | |||||| |||||||||||||||| |    
T  18336642 gggacgaatctgaaattacagggacgtaatttatgcaaattctgctgatgtgatgaaaggagggatcaaaagcggaagaatctgaaattacagggacaaa 18336543  T
Q  133 atctaaatc--nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctatta 211  Q
    |||||||||          ||||||||||| |||||||||||||||||||| |||||||||||| | ||||||||| ||||    
T  18336542 atctaaatcttttttttttacagggactaaaatcggaattcgctaatattatagggacgaaaagagatatttacccaatta 18336462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 993935 - 994058
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||| |||| |||| ||||||||||||||||||| |||||| ||     
T  993935 acagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatacagattctgttgacatgataaaaggagggaccaaaagtggaagaatctgc 994034  T
Q  118 aattacagggacataatctaaatc 141  Q
    ||||||||||||| ||||||||||    
T  994035 aattacagggacaaaatctaaatc 994058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 4919179 - 4919366
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||| |||||||||| |||||||| |||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| |||||||  |||||| |||    
T  4919179 acagtgaccaaaagttggaggaatatgaaattacaaggacgtaatttatgcatattctgttgacttgatgaaaggagggatcaaaagtagaagaatctga 4919278  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
    ||||||||||||| ||||||| |         ||||| ||||| | ||||||||||||||||| ||| ||||||||| ||||||||||    
T  4919279 aattacagggacaaaatctaatttttttttttacaggaactaaaaccggaattcgctaatattccagagacgaaaagaggtatttacc 4919366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 41001542 - 41001729
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||| ||||||||||||  |||||||| |  ||| ||||||||| || ||||| |||| |||||||||||||||||||||||| |||||| |||    
T  41001542 acagggaccagaagtgggaggaagatgaaattacagtgacataatttatgtaggttctgttgacttgatgaaaggagggaccaaaagtggaagaatctga 41001641  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
    ||||| ||||||| ||||||||||        ||| ||||||| | ||||||||||||||||||||||||||||||  ||||||||||    
T  41001642 aattatagggacaaaatctaaatcttttttttacaaggactaaaaccggaattcgctaatattacagggacgaaaaaaggtatttacc 41001729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 6817318 - 6817432
Alignment:
Q  26 caaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacag 125  Q
    |||||||||||||||| |||||||| | |||||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  6817318 caaaagtgggaggaatttgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacag 6817417  T
Q  126 ggacataatctaaat 140  Q
    ||||| |||||||||    
T  6817418 ggacaaaatctaaat 6817432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 6817265 - 6817122
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||||        ||||||||||| |     
T  6817265 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacatggacataatctaaatcttttttttacagggactaaaac 6817166  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||    
T  6817165 cggaattcactaatattacaaggacgaaaagaggtatttaccct 6817122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 23979136 - 23979279
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||| ||||||||||         ||||||||||| |    
T  23979136 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 23979235  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
     ||||||||||||||||||||||||||||||| |||||||||||    
T  23979236 ccggaattcgctaatattacagggacgaaaagaggtatttaccc 23979279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 24650889 - 24651081
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||| ||||||| ||| |||||||| | ||| ||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| | |    
T  24650889 acagggaccaaa-gtgggagaaatatgaaattacagggatgtaatttatgcggattctgctgacgtgatgaaaggagggatcaaaagtggaagaatctaa 24650987  T
Q  118 aattacagggacataatcta-aatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctatt 210  Q
    ||||||||||| | |||||| | |         ||| ||||||| | ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  24650988 aattacagggataaaatctagattttcttttttacatggactaaaaccggaattcgctaatattacagagacgaaaagaggtatttaccctatt 24651081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 7126060 - 7125923
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| || ||  |||||||||||||| |||||| |||||||| ||||||| ||||||||||        ||||||||||| ||    
T  7126060 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatcttttttttacagggactaaaat 7125961  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatt 201  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  7125960 cggaattcgctaatattacaggaacgaaaagaggtatt 7125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 68 - 209
Target Start/End: Complemental strand, 24837308 - 24837166
Alignment:
Q  68 cagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaatatcgg 166  Q
    ||||||||||| ||||| || || ||||||||||||||| ||||||||||||||||| ||||| ||||||||||         ||||||||||| | |||    
T  24837308 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaaccgg 24837209  T
Q  167 aattcgctaatattacagggacgaaaagtggtatttaccctat 209  Q
    ||||||||| |||||||||||||||||| ||||||||||||||    
T  24837208 aattcgctattattacagggacgaaaagaggtatttaccctat 24837166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 14144136 - 14144281
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||| ||||||| || ||  |||||||||||||| |||||| |||||||||||||||| ||||||||||         ||||||||||| |    
T  14144136 tatgcagattctggtgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 14144235  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    |||||||||| ||||||||||| ||||||||| |||||| ||||||    
T  14144236 tcggaattcgttaatattacagtgacgaaaagaggtattaacccta 14144281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 20709355 - 20709278
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  20709355 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacagaatctaaatc 20709278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 4919133 - 4918987
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaat 161  Q
    |||||| |||||||| ||||| || || ||||||||||||||| ||||||||||||||||||||||| ||||||||||          ||||| |||||     
T  4919133 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaa 4919034  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    | || |||||||||||||||||| || |||||| |||||||||||||    
T  4919033 accgaaattcgctaatattacagagatgaaaagaggtatttacccta 4918987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 30512430 - 30512287
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || ||||||||||||||| || ||| |||||||||||||||  ||||||||||        ||||||||||| |     
T  30512430 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatcctttttttacagggactaaaac 30512331  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |  ||||| |||||||||||||||||||||| | ||||||||||    
T  30512330 caaaattcactaatattacagggacgaaaagagatatttaccct 30512287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 30552770 - 30552627
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || ||||||||||||||| || ||| |||||||||||||||  ||||||||||        ||||||||||| |     
T  30552770 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatcctttttttacagggactaaaac 30552671  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |  ||||| |||||||||||||||||||||| | ||||||||||    
T  30552670 caaaattcactaatattacagggacgaaaagagatatttaccct 30552627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 993890 - 993751
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || ||||||||||||||| ||||||||||||||||| ||||  ||||||| |         ||||||||||| |     
T  993890 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggactaaatctaatt--tttttttacagggactaaaac 993793  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
    ||||||||||||||||||||| |||||||||  |||||||||    
T  993792 cggaattcgctaatattacagagacgaaaagaagtatttacc 993751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 17762517 - 17762662
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnn-acagggactaata 162  Q
    |||||| |||||||| ||||| || || ||||||||||||||| |||||| ||||||||  |||||| ||||||||||         ||||||||||| |    
T  17762517 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattatggggacaaaatctaaatctttttttttacagggactaaaa 17762616  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
     | ||||||||||||| ||||||||||||||| |||||||||||||    
T  17762617 ccagaattcgctaatactacagggacgaaaagaggtatttacccta 17762662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 31799776 - 31799640
Alignment:
Q  71 attctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaat 169  Q
    |||||||| ||||| || ||  |||||||||||||| |||||| |||||||||||||||| ||||||||||         ||||||||| | | ||||||    
T  31799776 attctgcttacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactgaaaccggaat 31799677  T
Q  170 tcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    |||||||||||| |||||||||||| |||||||||||    
T  31799676 tcgctaatattatagggacgaaaagaggtatttaccc 31799640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 24074537 - 24074614
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||||||||||||| | |||  |||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  24074537 tatgcagattctgctgacgtggttaaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 24074614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 22571206 - 22571090
Alignment:
Q  78 tgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaa-tcnnnnnnnnacagggactaatatcggaattcgctaa 176  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||| || |||||||||| |         ||||||||||| |||||||||||||||    
T  22571206 tgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacagagatataatctaaatttttttttttacagggactaaaatcggaattcgctaa 22571107  T
Q  177 tattacagggacgaaaa 193  Q
    ||||||| |||| ||||    
T  22571106 tattacaaggacaaaaa 22571090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 41001496 - 41001370
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| || || || || || |||||||||||| ||||||||||||||||||||||| ||||||| |         ||||||||||| |     
T  41001496 tatgcagattctgcttacatggtggaatgaaggaccaaaagtggaagaatatgaaattacagggacaaaatctaatt--tttttttacagggactaaaac 41001399  T
Q  164 cggaattcgctaatattacagggacgaaa 192  Q
    || ||||||||||||||||||||||||||    
T  41001398 cgaaattcgctaatattacagggacgaaa 41001370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 18336720 - 18336833
Alignment:
Q  93 agggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnn-acagggactaatatcggaattcgctaatattacagggacgaa 191  Q
    ||||| |||||||| |||||| |||||||||||||||| ||||||||||         ||||||||||| | |||||||||||||| |||||||||||||    
T  18336720 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaat-ttacagggacgaa 18336818  T
Q  192 aagtggtatttaccc 206  Q
    ||| |||||||||||    
T  18336819 aagaggtatttaccc 18336833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 22571268 - 22571386
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    |||||||||| || ||||||| ||||||||| | |||||||||||||||||||| || ||||||| ||||| |||||| |||||    |||||| |||||    
T  22571268 agggaccaaatgtaggaggaacctgaaattacagggacgtaatttatgcagattttgttgacgtggtgaaatgagggagcaaaacgagaagaatttgaaa 22571367  T
Q  120 ttacagggacataatctaa 138  Q
    ||||| | ||| |||||||    
T  22571368 ttacatgaacaaaatctaa 22571386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 14411901 - 14412045
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||| |||||||||| ||||| || || ||||||||||| ||| |||||| |||||||||| ||||| |||||||||         ||||||||||| |     
T  14411901 tatgtagattctgcttacgtggtggaatgagggaccaaacgtggaagaatctgaaattacaaggacaaaatctaaattttttttttacagggactaaaac 14412000  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    || |||||| |||||||| || || |||||| |||||||||||||    
T  14412001 cgaaattcgttaatattatagagatgaaaagaggtatttacccta 14412045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 24650843 - 24650704
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||||||| |||||||||| || || |||  |||||||||| ||||||||||||||||||| ||| ||||||||||        |||  || ||| |     
T  24650843 tatgcagattttgctgacgtggtggaatgagctaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatc-tttttttacatagattaaaac 24650745  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttac 204  Q
    || |||||| ||||||||||||||||||||| |||||||||    
T  24650744 cgaaattcgttaatattacagggacgaaaagaggtatttac 24650704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 27159133 - 27158990
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||| ||||| |||||||||| || ||  |||||||||||||| |||||| |||||||||||||||| ||| ||||||        || | |||||| |     
T  27159133 tatgtagattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttaactgagactaaaac 27159034  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
     | ||||||||||||||||| |||||||||| |||||| |||||    
T  27159033 tgaaattcgctaatattacatggacgaaaagaggtattaaccct 27158990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 29445041 - 29445184
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    |||||| ||| | |||||||| || ||  |||||||||||||| |||||| |||||||||| ||||| ||||||||||         ||| ||||||| |    
T  29445041 tatgcaaattttactgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctttttttttaca-ggactaaaa 29445139  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
      |||||||||||||||||||||||||||||| | |||| |||||    
T  29445140 ctggaattcgctaatattacagggacgaaaagagatattaaccct 29445184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 23979089 - 23979042
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatg 67  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  23979089 agggaccaaaagtgggagaaatatgaaattacaaggacgtaatttatg 23979042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 37281856 - 37281930
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaa 138  Q
    ||||||||||||||||||||||| ||| ||| |||||||| | | | ||| ||||||||| | ||||||||||||    
T  37281856 tatgcagattctgctgacgtgattaaatgagagaccaaaaataacataatctgaaattacggagacataatctaa 37281930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 20947069 - 20947121
Alignment:
Q  23 gaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctg 76  Q
    |||||||||||| ||||||||||||||| |  || |||||||||||||||||||    
T  20947069 gaccaaaagtgg-aggaatctgaaattacattgaggtaatttatgcagattctg 20947121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 213 - 334
Target Start/End: Original strand, 36064190 - 36064311
Alignment:
Q  213 ttatataattatttgtataagaacacctgagcaaatgtgagcataattttattgtatgcatcattatccttggtacgtttataaagactttgatatatga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36064190 ttatataattatttgtataagaacacctgagcaaatgtgagcataattttattgtatgcatcattatccttggtacgtttataaagactttgatatatga 36064289  T
Q  313 aaccacatagattagtctgcgt 334  Q
    ||||||||||||||||||||||    
T  36064290 aaccacatagattagtctgcgt 36064311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 24467817 - 24467628
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||||||||  |||| |||||||||||||||||||||||| |||||| |||    
T  24467817 acagggaccaaaagtgggaggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatctga 24467718  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||| ||||||||||        ||||||||||| || ||||||||||||||||||||||||||||||  |||||||||||    
T  24467717 aattacagggacaaaatctaaatcttttttttacagggactaaaattggaattcgctaatattacagggacgaaaagatgtatttaccct 24467628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 18462472 - 18462280
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||||||||||  |||| ||||||||||||||||||||| || |||||| |||||    
T  18462472 agggaccaaaagtgggaggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaaatggaagaatctgaaa 18462373  T
Q  120 ttacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattat 212  Q
    ||||||||||| ||||||||||        ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  18462372 ttacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttacccttttat 18462280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 39711261 - 39711074
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  39711261 acagggaccaaaagcgggaggaatatgaaattacaaggacgtaatttatgcagattctgctgacgtgattaaaggagggaccaaaagtggaagaatatga 39711162  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||| ||||| ||||||||||        ||||||||||| | ||||||||||||||||||||  ||||||||| |||||||||||    
T  39711161 aattacaaggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattaca-agacgaaaagaggtatttaccc 39711074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 17606497 - 17606302
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  17606497 acagggaccaaaagtgggaggaatatgaaattacagggacgtaatttatacagattctgctgacgtgatgaaatgagggaccaaaagtggaagaatatga 17606398  T
Q  118 aattacagggacataatctaaatc-----nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||| ||| ||||||||||             ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  17606397 aattacaggaacaaaatctaaatctttttttttttttacagggactaaaatcggaattcgctaatattacagggacgaaaagaggtatttatccta 17606302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 4907151 - 4907340
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||    
T  4907151 acagggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctactgacgtgatgaaaggagggaccaaaagtggaagaatctga 4907250  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||| ||||||||||         ||||||||||| |  ||||||||||||||||||||||| |||||  | |||||||||    
T  4907251 aattacagggacaaaatctaaatcttttattttacagggactaaaactggaattcgctaatattacagggaggaaaatagatatttaccc 4907340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 206
Target Start/End: Complemental strand, 8292989 - 8292804
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  8292989 ggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaagaggaaccaaaagtggaagaatatgaaatt 8292890  T
Q  122 acagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
     |||||||| ||||||||||         ||||||||||| | ||| ||||||||||| ||||||||||||||| | |||||||||    
T  8292889 tcagggacaaaatctaaatcttttattttacagggactaaaaccgggattcgctaatagtacagggacgaaaagagttatttaccc 8292804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 52058204 - 52058387
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||| |||||||    
T  52058204 ggaccaaaagtgggaggaatctgaaatcatagggacgtaatttatgcagattctg---acgtgatgaaaggagggaccaaaagtggaagaatctgaaatt 52058300  T
Q  122 acagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||||||||||         ||||| ||||| | |  |||||||||||||||||||||||||||| ||||||||||||    
T  52058301 acagggacataatctaaatctttttttctacaggaactaaaaccaaaattcgctaatattacagggacgaaaagaggtatttaccct 52058387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 29696752 - 29696563
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||| ||||||||||| |||||||| | |||| ||||||||||||||||||| || ||||||||||||| ||| ||||||| ||||||||||    
T  29696752 acagggaccaaa-gtgggaggaatatgaaattatagggacataatttatgcagattctgccgatgtgatgaaaggagtgacaaaaagtggaagaatatga 29696654  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    |||||| |||||| ||||||||||        |||| |||||| | || |||||||||||||||||||||||||||| |||||||||||||    
T  29696653 aattacggggacaaaatctaaatcttttttttacagagactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttacccta 29696563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 27 - 207
Target Start/End: Complemental strand, 30299411 - 30299231
Alignment:
Q  27 aaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagg 126  Q
    |||||||||||||||||||||||| | |||||||||||||| |||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  30299411 aaaagtgggaggaatctgaaattacagggacgtaatttatggagattctgttgacttgatgaaaggagagaccaaaagtggaagaatatgaaattacagg 30299312  T
Q  127 gacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||| ||||||||||         ||| ||||||| |||| | |||||||||||||||||||||||||| ||||||||||||    
T  30299311 gacaaaatctaaatctttttttttaca-ggactaaaatcgaagttcgctaatattacagggacgaaaagaggtatttaccct 30299231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 20995858 - 20995747
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  20995858 acagggacgaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtgaaagaatataa 20995759  T
Q  118 aattacagggac 129  Q
    ||||||||||||    
T  20995758 aattacagggac 20995747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 43539536 - 43539413
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| |||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |    
T  43539536 acagggagcaaaagtgggaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaacaatataa 43539437  T
Q  118 aattacagggacataatctaaatc 141  Q
    ||||||||||||| ||||||||||    
T  43539436 aattacagggacaaaatctaaatc 43539413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 39826239 - 39826424
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||||||||    |||||||||||| |||||| |||    
T  39826239 acagggatcaaaagtgggaggaatctaaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaa----ggaccaaaagtggaagaatctga 39826334  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||| ||||||||||         ||||||||||| | || ||||||||||||||||| |||||||||| |||||||||||    
T  39826335 aattacagggacaaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacatggacgaaaagaggtatttaccc 39826424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 33628879 - 33629078
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||| ||||||||| |||||||| | |||| ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| |||    
T  33628879 acagggaccaaaagcgggaggaatttgaaattacagggacataatttatgtagattctgctgacgtgattaaaggagggaccaaaagtggaagaatctga 33628978  T
Q  118 aattacagggacataatctaa-atcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttat 216  Q
    ||||||||||||| |||| ||  |         ||||||||||| | ||||||||||||||||||||||||| ||||| |||||| ||||| | ||||||    
T  33628979 aattacagggacaaaatcaaattttttttttttacagggactaaaaccggaattcgctaatattacagggacaaaaagaggtattaaccctttcatttat 33629078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 34749297 - 34749483
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| |||||    
T  34749297 agggaccaaaagtgg-aggaatctgaaattacagggatgtaatttatgcagattctgctgacgtgattaaaggaggtaccaaaagtggaagaatctgaaa 34749395  T
Q  120 ttacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||| | ||||||||||         ||| ||||||| ||||||||||| ||||||||||| ||| ||||| |||||||||||    
T  34749396 ttacagggataaaatctaaatctttttttttacaaggactaaaatcggaattcgataatattacagagacaaaaagaggtatttaccc 34749483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 48072150 - 48072027
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| |||||||||||||||| |||||||| | |||||||||||||||| |||||||||| |||||||||||||||| |||||||| || |||||||    
T  48072150 acagggatcaaaagtgggaggaatttgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggagcaaaagtggaataatatga 48072051  T
Q  118 aattacagggacataatctaaatc 141  Q
    ||||||||||||| ||||||||||    
T  48072050 aattacagggacaaaatctaaatc 48072027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 206
Target Start/End: Original strand, 39970839 - 39971024
Alignment:
Q  23 gaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatta 122  Q
    ||||||||||||||||||||| |||||  | ||||  ||||||||| |||||||||||||||||||||| |||||||||||||| ||| || | ||||||    
T  39970839 gaccaaaagtgggaggaatctaaaatttcagggacacaatttatgcggattctgctgacgtgatgaaagaagggaccaaaagtggaaggatctaaaatta 39970938  T
Q  123 cagggacataatctaaatc--nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    |||||||| ||||||||||          ||||||||||| | || |||||| |||||||||| |||||||||| |||||||||||    
T  39970939 cagggacaaaatctaaatcttttttttttacagggactaaaaccgaaattcgttaatattacatggacgaaaagaggtatttaccc 39971024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 201
Target Start/End: Original strand, 42510203 - 42510388
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||| ||||||  | ||||| |||||| |||    
T  42510203 acagggaccaaaagtgggaggaatctgaaattacaggggtgtaatttatgcagattctgctgacgtgatgaaatgagggaatacaagtggaagaatctga 42510302  T
Q  118 aattacagggacataatctaaa--tcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatt 201  Q
    ||||| ||||  | ||||||||  |         ||| ||||||| | ||||||||||||||||||||||||| ||||||||||||    
T  42510303 aattataggggtagaatctaaattttttttttttacaaggactaaaaccggaattcgctaatattacagggaccaaaagtggtatt 42510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 13229917 - 13229815
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||||||| || |||| |||||||||||| || |||||||| ||||||||||||||    
T  13229917 ggaccaaaagtgagaggaatctgaaattacagggacgtaatttatgcagattatgttgacttgatgaaaggagtgatcaaaagtggaagaatatgaaatt 13229818  T
Q  122 aca 124  Q
    |||    
T  13229817 aca 13229815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 4907105 - 4906961
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||| ||||||||| || || ||||||||||||||| ||||||||||||||||||||||| ||||||||||         ||||||||||| |    
T  4907105 tatgcagattcggctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcattttttttacagggactaaaa 4907006  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
       |||||| |||||||||||||||||||||| ||||||||||||    
T  4907005 ctagaattcactaatattacagggacgaaaagaggtatttaccct 4906961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 39711307 - 39711451
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    |||||| |||||||| ||||| || || ||||||||||||||| |||||||||||||||| |||||| ||||||||||         ||||||||||| |    
T  39711307 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttttacagggactaaaa 39711406  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
     | ||||||||||||||||||||||||||||| ||||||||||||    
T  39711407 ccagaattcgctaatattacagggacgaaaagaggtatttaccct 39711451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 34749280 - 34749137
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||| |||||||| ||||| || || ||||||||||||||| |||||||||||||||| |||||| ||||||||||        | ||||||||| ||    
T  34749280 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatcttttttttatagggactaaaat 34749181  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    | |||||||||||||||||||||| ||||||  |||||||||||    
T  34749180 cagaattcgctaatattacagggatgaaaagatgtatttaccct 34749137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 42510157 - 42510015
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||| ||| ||||| ||||||| ||||||| ||||||||||||||||||||||| |||||||||         ||||||| ||| |     
T  42510157 tatgcagattctgctgatgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggacaaaatctaaattatttttttacagggattaaaac 42510058  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||||||||||||||  |||||| ||||| ||||    
T  42510057 cggaattcgctaatattacagggataaaaagtagtattaaccc 42510015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 48072196 - 48072341
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat-cnnnnnnnnacagggactaata 162  Q
    ||||||||||||||||||||| ||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||          ||| ||||||| |    
T  48072196 tatgcagattctgctgacgtggtgaaatgaggacccaaaagtggaagaatatgaaattacagggacataatctaaatatttttttttacaaggactaaaa 48072295  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
     |||||||| |||||||||||  ||||||||| |||||||||||||    
T  48072296 ccggaattcactaatattacaatgacgaaaagaggtatttacccta 48072341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 39826193 - 39826049
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||| ||||| || || |||||| |||||||| |||||| |||||||||||||||| ||||||||||         ||||||||||| |    
T  39826193 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 39826094  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||| ||||||||||||||| | |||||||||| ||||||||||||    
T  39826093 tcgaaattcgctaatattatatggacgaaaagaggtatttaccct 39826049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 52058154 - 52058011
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||| |||||| |||||||||||||||||| ||||||||         ||||  ||||| |    
T  52058154 tatgcagattctgctgatgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacatagtctaaatctttttttttacagaaactaaaa 52058055  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
     ||||||||| |||||||||| |||||||||| |||||||||||    
T  52058054 ccggaattcgttaatattacaaggacgaaaagaggtatttaccc 52058011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 17606543 - 17606685
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||| ||| |||||||||| || ||  |||||||||||||| |||||| |||||||||| ||||| ||||||||||        ||||||||||| |     
T  17606543 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatcttttttt-acagggactaaaac 17606641  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  17606642 cggaattcgctaatattacagggacgaaaagaggtattaaccct 17606685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 33628833 - 33628688
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    |||||| |||||||| | ||| || || |||||||||||||||||||||| ||||||||| |||||| ||||||||||         || |||||||| |    
T  33628833 tatgcaaattctgcttatgtggtggaatgagggaccaaaagtgaaagaatctgaaattacggggacaaaatctaaatctttttttttacggggactaaaa 33628734  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
     | ||||||||||||||||||||||||||||| |||||||||||||    
T  33628733 ccagaattcgctaatattacagggacgaaaagaggtatttacccta 33628688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 16294138 - 16294258
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    |||||||||||||||  ||||||  |||||| | |||||||||||||| ||||||||||||| || | |||  |||||||||||||| | ||||||||||    
T  16294138 agggaccaaaagtggatggaatcataaattacagggacgtaatttatgtagattctgctgacatggttaaataagggaccaaaagtggaggaatatgaaa 16294237  T
Q  120 ttacagggacataatctaaat 140  Q
    ||||| ||||| |||||||||    
T  16294238 ttacaaggacaaaatctaaat 16294258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 20995903 - 20996046
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| || ||  |||||||||||||| |||||||||||||||||| |||| ||||||||||        ||| ||||||| |     
T  20995903 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatcttttttttacatggactaaaac 20996002  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
       |||||||||||||||||||||| ||||| |||||| |||||    
T  20996003 taaaattcgctaatattacagggacaaaaagaggtattaaccct 20996046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 8293042 - 8293187
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaat 161  Q
    ||||||||||| |||||| || || || ||||||||||||||| ||||||||||||||||||||||| ||||||||||          |||||||||||     
T  8293042 tatgcagattcggctgacatggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaa 8293141  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |   ||||||| |||||||| |||||||||||| ||||||||||||    
T  8293142 actagaattcgttaatattatagggacgaaaagaggtatttaccct 8293187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 24467862 - 24467939
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    |||||||||||| |||||||| ||||| ||||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  24467862 tatgcagattctactgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 24467939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 207
Target Start/End: Original strand, 29696794 - 29696936
Alignment:
Q  65 atgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatc 164  Q
    |||||||||||||| ||||| || || ||||||||||||||| |||||| |||||||||| ||||| ||||||| |         |||| |||||| | |    
T  29696794 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatggacaaaatctaatttttttttttacagtgactaaaacc 29696893  T
Q  165 ggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||||||||||||||   |||||||| ||||||||||||    
T  29696894 ggaattcgctaatattacataaacgaaaagaggtatttaccct 29696936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 7473935 - 7473862
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatcta 137  Q
    ||||||||||||  ||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||||||    
T  7473935 tatgcagattcttttgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacagagacataatcta 7473862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 18462519 - 18462663
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||| ||||||| ||||| ||| ||||||||||| |||||| ||||||||| |||||| ||||||||||         ||| | ||||| |    
T  18462519 tatgcagattctgttgacgtggtgaaatgagagaccaaaagtggaagaatctgaaattacggggacaaaatctaaatctttttttatacaagaactaaaa 18462618  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
     ||||||| |||||||||||||||| |||||| ||||||| ||||    
T  18462619 ccggaatttgctaatattacagggaggaaaagaggtatttgccct 18462663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 20995754 - 20995691
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattatt 213  Q
    ||||||||||| | ||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  20995754 acagggactaaaaccggaattcgctaatattacagagatgaaaagaggtatttaccctattatt 20995691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 30299466 - 30299609
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    |||||||||||| || ||||| || || ||||||||||||||| |||||| | |||||||||||||| ||||||||||         ||||| ||||| |    
T  30299466 tatgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttacaggaactaaaa 30299565  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
     || |||| ||||||||||||| ||||||||  |||||||||||    
T  30299566 ccgaaatttgctaatattacagagacgaaaataggtatttaccc 30299609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 30780270 - 30780356
Alignment:
Q  35 gaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||| |||||||| || |||||||||||| |||||||||||||||||||  || || ||| |||||||| | ||||||||||||    
T  30780270 gaggaatatgaaattacaatgacgtaatttatacagattctgctgacgtgattgaatgaaggatcaaaagtggaggaatatgaaatt 30780356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 39970789 - 39970712
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    |||||||||| |||||||||| || || ||||||||||||||| |||||| ||||||||||  |||| ||||||||||    
T  39970789 tatgcagattttgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatagacaaaatctaaatc 39970712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 17501967 - 17502107
Alignment:
Q  66 tgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcg 165  Q
    ||||||||||||||||  | | ||| ||||||| ||||||| | |||| |||||||||||||||| ||||||||          | ||||||||| | ||    
T  17501967 tgcagattctgctgacagggttaaacgagggactaaaagtggaggaatctgaaattacagggacagaatctaaactttttttttatagggactaaaaccg 17502066  T
Q  166 gaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    |||||||||||||||||| |||| ||||||| |||| ||||    
T  17502067 gaattcgctaatattacaaggaccaaaagtgatattaaccc 17502107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 206
Target Start/End: Original strand, 18342261 - 18342395
Alignment:
Q  71 attctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaatt 170  Q
    |||||||| ||||| || || ||||||| ||||||| ||||||||||||||||| | | | ||| |||||         ||||||||||| | || ||||    
T  18342261 attctgcttacgtggtggaatgagggactaaaagtggaagaatatgaaattacaagaataaaatttaaat-ttttttttacagggactaaaaccgaaatt 18342359  T
Q  171 cgctaatattacagggacgaaaagtggtatttaccc 206  Q
    |||||||||||||||||||||||  |||||||||||    
T  18342360 cgctaatattacagggacgaaaaaaggtatttaccc 18342395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 13229966 - 13230024
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatta 122  Q
    ||||||||||||||| ||||| || || ||||||||||||||| ||||| |||||||||    
T  13229966 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaagatgaaatta 13230024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 17500825 - 17500767
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    |||| |||||| | ||||||||||||||||||||||||| |||| ||||||| ||||||    
T  17500825 acagagactaaaaccggaattcgctaatattacagggaccaaaaatggtattaacccta 17500767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 30252161 - 30252281
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggac-- 188  Q
    |||||| ||||| || |||||||||||||||| |||||| ||||||||||         ||||||||||| | | |||||||||||||||| ||||||      
T  30252161 gagggatcaaaaatggaagaatatgaaattacggggacaaaatctaaatctttatttttacagggactaaaaccagaattcgctaatattatagggacaa 30252260  T
Q  189 gaaaagtggtatttaccctat 209  Q
    | |||| ||||||||||||||    
T  30252261 ggaaagaggtatttaccctat 30252281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 27039680 - 27039636
Alignment:
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||||    
T  27039680 cggaattcgctcatattacagggacgaaaagaggtattaacccta 27039636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 37236772 - 37236705
Alignment:
Q  152 agggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttatata 219  Q
    ||||||||| | ||||||||||| ||||||||||||| ||||| | |||| | ||| |||||||||||    
T  37236772 agggactaaaaccggaattcgctcatattacagggaccaaaagagatattaatccttttatttatata 37236705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 43539582 - 43539653
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatc 135  Q
    ||||||||||| ||||||||| || ||  ||||||||||| || |||||| |||||||||| ||||| ||||    
T  43539582 tatgcagattcggctgacgtggtggaataagggaccaaaactggaagaatttgaaattacatggacaaaatc 43539653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 43539669 - 43539726
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||| ||||| | ||||||| ||||||||||||||||||||||| | |||| |||||    
T  43539669 acaggaactaaaaccggaatttgctaatattacagggacgaaaagagctattaaccct 43539726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 7473985 - 7474083
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||  ||||||||||  |||  ||||||||||||||| |||| | ||| | |||  |||||||||||||  | |||||| |||||    
T  7473985 ggaccaaaagtgggagga--ctgaaattag--ggatataatttatgcagattttgctcaagtggttaaataagggaccaaaagtagaggaatatcaaatt 7474080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 16294099 - 16294047
Alignment:
Q  156 actaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||| |||| |||||||||||||||||||||| ||||  |||||| ||||||    
T  16294099 actaaaatcgaaattcgctaatattacagggaccaaaatcggtattaacccta 16294047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 9e-61; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 41600147 - 41600337
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| |||    
T  41600147 acagggaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctga 41600246  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||| ||||||||||         ||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||    
T  41600247 aattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacaaaaagaggtatttaccct 41600337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 12006729 - 12006920
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| |||    
T  12006729 acagtgaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctga 12006828  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||| ||||||||||         ||||||||||| |||||||||||||||||||||| | |||||||| |||||||||||||    
T  12006829 aattacagggacaaaatctaaatctttttatttacagggactaaaatcggaattcgctaatattacatgaacgaaaagaggtatttacccta 12006920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 28218352 - 28218543
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||| |||    
T  28218352 acagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatctga 28218451  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||| ||||||||||         ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  28218452 aattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttacccta 28218543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 23383693 - 23383881
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| |||| |||||||||||||||||||| ||| ||||||||||||||    
T  23383693 ggaccaaaagtgggaggaatctaaaattacaaggacgtagtttatgcagattctgttgacttgatgaaaggagggaccaaaggtggaagaatatgaaatt 23383792  T
Q  122 acagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctat 209  Q
    ||||||||| ||||||||||          |||||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||    
T  23383793 acagggacaaaatctaaatcttttttttttcagggactaaaatcagaattcactaatattacagggacgaaaagaggtatttaccctat 23383881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 23704850 - 23704662
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||  |||| |||||||||||||||||||||||| |||||| |||    
T  23704850 acagggaccaaaagtgggaggaatctgaaattacagggaagtaatttatgcagattctattgacttgatgaaaggagggaccaaaagtggaagaatctga 23704751  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||| ||| ||||||        |||| || ||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  23704750 aattacagggacaaaatgtaaatcttttttttacagtgagtaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 23704662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 22 - 210
Target Start/End: Original strand, 20963688 - 20963875
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||| ||| || |||||||||||||||| ||||||||||||||||||| |||||||    
T  20963688 ggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcaaattatgttgacgtgatgaaagga-ggaccaaaagtgaaagaatctgaaatt 20963786  T
Q  122 acagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctatt 210  Q
    ||||||||  |||||||||         ||||||||||| | ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  20963787 acagggactaaatctaaattttatttttacagggactaaaaccggaattcgctaatattacagggacaaaaagaggtatttaccctatt 20963875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 20419725 - 20419915
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| || |||| |||||||||||||||||||||||  |||||| |||    
T  20419725 acagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgaagattttgttgacttgatgaaaggagggaccaaaagtagaagaatctga 20419824  T
Q  118 aattacagggacataatctaaatc--nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||| ||||||||||          ||||||||||| | ||||||||| ||||||||||||||| ||||| |||||||||||    
T  20419825 aattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgttaatattacagggacaaaaagaggtatttaccc 20419915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 48672472 - 48672659
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||||| |||||||    
T  48672472 ggaccaaaagtgggaggaatttgaaattacaaggacgtaattgatgcagattttgctaacgtgatgaaaggagggaccaaaagtggaagaatctgaaatt 48672571  T
Q  122 acagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||| | ||||||||||         ||||||||||| | || |||||||||||||||||| ||||||||| |||||||||||||    
T  48672572 acagggataaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacagagacgaaaagaggtatttacccta 48672659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 6466043 - 6465855
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| |||||||||||||||| |||||||| | |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||    
T  6466043 acagggatcaaaagtgggaggaatttgaaattacagggacataatttatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatctga 6465944  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||| | |||||||||||||         ||||||||||| | |||||||||||||||||||| |||||||||  | |||||||||    
T  6465943 aattacaagaacataatctaaatattttttttacagggactaaaaccggaattcgctaatattacatggacgaaaaaagatatttaccc 6465855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 25772523 - 25772711
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||| |||||    
T  25772523 agggaccaaaagtgg-aggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaa 25772621  T
Q  120 ttacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||| ||||||||||         ||||||||||| |  ||||||| ||||||||| |||||||||||| | |||||||||||    
T  25772622 ttacagggacaaaatctaaatctttttttttacagggactaaaactggaattcactaatattatagggacgaaaagagatatttacccta 25772711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 20458884 - 20459079
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||| |||||||||||||||||| | |||||||||||||||| |||||| |||| |||| ||||||||||||||||||| |||||| |||||||    
T  20458884 ggaccaaaagcgggaggaatctgaaattacagggacgtaatttatgcaaattctgttgacttgatcaaaggagggaccaaaagtggaagaatctgaaatt 20458983  T
Q  122 acagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttata 217  Q
    |||| |||| ||||||||||         ||||| ||||| | |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  20458984 acagtgacaaaatctaaatctttttttttacaggtactaa-accggaattccctaatattacagggacgaaaagaggtatttaccctattttttata 20459079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 23 - 206
Target Start/End: Original strand, 38879918 - 38880099
Alignment:
Q  23 gaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatta 122  Q
    ||||||||||||||||||| |||||||| | ||||||||||||||||||||||| |||| || ||||||||||||||||||||| |||||| ||||||||    
T  38879918 gaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattctgttgacttggtgaaaggagggaccaaaagtggaagaatctgaaatta 38880017  T
Q  123 cagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    |||||||| |||||||||         | |  |||||| | ||||||| ||||||||||||||||||||||| |||||||||||    
T  38880018 cagggacaaaatctaaattttttttttaaa--gactaaaaccggaatttgctaatattacagggacgaaaagaggtatttaccc 38880099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 1250395 - 1250572
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||| |||||||| | |||||||| |||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  1250395 acagtgaccaaaaataggaggaatttgaaattacagggacgtaatttatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatatga 1250494  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaag 194  Q
    ||||| ||||||| ||||||||||         |||| |||||| |  ||||||||||||||||||| ||||||||||    
T  1250495 aattaaagggacaaaatctaaatcttttagtttacagagactaaaactggaattcgctaatattacaaggacgaaaag 1250572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 23704896 - 23705040
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || ||||||||||||||| ||||||||||||||||||||||| ||||||||||        ||||||||||| |     
T  23704896 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaac 23704995  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  23704996 cggaattcgctaatattacagagacgaaaagaggtatttacccta 23705040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 31851428 - 31851548
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| ||||| || |||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  31851428 acagggatcaaaattgagaggaatctgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagagaccaaaagtggaagaatatga 31851527  T
Q  118 aattacagggacataatctaa 138  Q
    ||||||||||||| |||||||    
T  31851528 aattacagggacaaaatctaa 31851548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 205
Target Start/End: Original strand, 7658162 - 7658342
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||||||||||| |||||||| | |||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| | |||||    
T  7658162 ggaccaaaagtgggaggaatatgaaattacagggacataatttatgcagattttgctgacgtgatgaaaggagagaccaaaagtggaagaatcttaaatt 7658261  T
Q  122 acagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
    ||||||||| |||||   |         |||| |||||| | || |||||| ||||||||||||||||||||| ||||||||||    
T  7658262 acagggacaaaatct---ttttttttttacagagactaaaaccgaaattcgttaatattacagggacgaaaagaggtatttacc 7658342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 48648421 - 48648603
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| | |||    
T  48648421 agggaccaaaattgg-aggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaggagggaccagaagtggaagaatctaaaa 48648519  T
Q  120 ttacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttac 204  Q
    |||||  |||| ||||||||||        | || |||||| |||| |||||||||||||||| |||||||||||  ||||||||    
T  48648520 ttacatagacaaaatctaaatc-tttttttatagagactaaaatcgaaattcgctaatattactgggacgaaaagaagtatttac 48648603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 65 - 207
Target Start/End: Complemental strand, 28218321 - 28218177
Alignment:
Q  65 atgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaata 162  Q
    |||||||||||||||||||| || || ||||||||||||||| |||||| |||||||||||||||| ||||||||||          ||||||||||| |    
T  28218321 atgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 28218222  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
     ||||||||||||||||||||||||||||||| ||||||||||||    
T  28218221 ccggaattcgctaatattacagggacgaaaagaggtatttaccct 28218177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 12006683 - 12006539
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || |||||| |||||||| |||||| |||||||||||||||| ||||||| |         ||||||||||| ||    
T  12006683 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaatttttttttttacagggactaaaat 12006584  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  12006583 cggaattcgctaatattacagggacgaaaagaggtatttacccta 12006539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 10409559 - 10409440
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||| |||||| ||||||  |||||| |||||||    
T  10409559 ggaccaaaagtaggaggaatctgaaattacaaggacgtaattgatgcagattttgctgaagtgatgaaagaagggactaaaagtagaagaatctgaaatt 10409460  T
Q  122 acagggacataatctaaatc 141  Q
    ||| ||||| ||||||||||    
T  10409459 acaaggacaaaatctaaatc 10409440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 38879867 - 38879723
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaat 161  Q
    ||||||||||||||| ||||| || || ||||||||||||||| ||||||||||||||||||||||| ||||||||||          ||||| |||||     
T  38879867 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaa 38879768  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    || |||||||||||||||||||||||||||||| |||||||||||    
T  38879767 attggaattcgctaatattacagggacgaaaagaggtatttaccc 38879723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 20419679 - 20419536
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||| ||||| || || |||||||||||| || ||||||||||||||||||||||| ||||||||||         ||||||||||| |    
T  20419679 tatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 20419580  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
     |||||||||||||||||| |||||||||||| |||||||||||    
T  20419579 ccggaattcgctaatattatagggacgaaaagaggtatttaccc 20419536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 25772506 - 25772363
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || |||||| |||||||| ||||||||||||||||| ||||| ||||||||||        ||||  ||||| ||    
T  25772506 tatgcagattctgcttacgtggtggaatgagggaacaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttacagaaactaaaat 25772407  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    || |||||||||||||||||||||||||||| ||||||||||||    
T  25772406 cgaaattcgctaatattacagggacgaaaagaggtatttaccct 25772363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 10409609 - 10409752
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || |||||| |||||||| |||||| | ||||||||| |||| ||||||||||        ||||||||||| ||    
T  10409609 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctaaaattacagagacaaaatctaaatcttttttttacagggactaaaat 10409708  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||    
T  10409709 cggaattcgctaatattacatggatgaaaagaggtatttaccct 10409752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 59 - 206
Target Start/End: Complemental strand, 16995347 - 16995200
Alignment:
Q  59 taatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggact 158  Q
    ||||| |||||||||||||||||||| || || | ||||||||||||| |||||| |||||||||||||||| |||||||||         ||||| |||    
T  16995347 taattgatgcagattctgctgacgtggtggaatgtgggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatattttttttacaggaact 16995248  T
Q  159 aatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    || | || |||||||||||||||||| ||||||||| |||||||||||    
T  16995247 aaaaccgaaattcgctaatattacagagacgaaaagaggtatttaccc 16995200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 44817028 - 44817142
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||| |||||| ||||| || | | ||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||||||||    
T  44817028 ggaccaaaagtggaaggaatttgaaactacatgtacgtaatttatgcagattctattgacttgatgaaaagagggaccaaaagtgaaagaatatgaaatt 44817127  T
Q  122 acagggacataatct 136  Q
    | | ||||| |||||    
T  44817128 ataaggacaaaatct 44817142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 20458834 - 20458690
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || ||||||||||||||| |||||| ||||||||||| |||| |||||||||         ||||||||||| |     
T  20458834 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaaattttttatttacagggactaaaac 20458735  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||| ||||||||||||||||||||   ||||||||||||    
T  20458734 cggaattcgttaatattacagggacgaaaaaatgtatttacccta 20458690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 7658113 - 7657972
Alignment:
Q  65 atgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc---nnnnnnnnacagggactaat 161  Q
    ||||||||| ||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||||||||||||           ||||||| |||     
T  7658113 atgcagattttgctgacgtgatgaaaggatggaccaaaagtgtaagaatttgaaattacatggacataatctaaatctttttttttttacagggattaaa 7658014  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtattta 203  Q
    | || ||||||||||||||||| |||||||||| ||||||||    
T  7658013 accgaaattcgctaatattacatggacgaaaagaggtattta 7657972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 48648404 - 48648263
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||||||||| || ||||| || || |||||||||||| ||||| ||| |||||||||||||||| ||||||||||        ||| ||||||| ||    
T  48648404 tatgcagattctacttacgtggtggaatgagggaccaaaaatgaaaaaatctgaaattacagggacaaaatctaaatctttttcttacatggactaaaat 48648305  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
    || |||||||| ||||||||||||||||||| | ||||||||    
T  48648304 cgaaattcgctgatattacagggacgaaaagagatatttacc 48648263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 24195031 - 24195108
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  24195031 tatgcagattctgcttacgtgatggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 24195108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 33162720 - 33162638
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaag 104  Q
    ||||||||||||| |||||| |||||||| ||| ||||||||||| |||||||| ||||||||||||||| ||||| ||||||    
T  33162720 ggaccaaaagtggaaggaatttgaaattacaagaacgtaatttatacagattctactgacgtgatgaaagaagggatcaaaag 33162638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 48672422 - 48672275
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc---nnnnnnnnacagggactaa 160  Q
    ||||||||||||||||||||| || || |||||| |||||||| |||||| ||||||||||| |||  ||||||||||           |||| ||||||    
T  48672422 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagagacgaaatctaaatctttttttttttacagagactaa 48672323  T
Q  161 tatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
     | || ||||| |||||||||||||||||||||| |||||||||||||    
T  48672322 aaccgaaattcactaatattacagggacgaaaagaggtatttacccta 48672275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 23383643 - 23383499
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaat 161  Q
    ||||||||||||||| ||||| || || ||||||| |||| || ||||||||||||||| ||||||| ||||||||||          | |||||||||     
T  23383643 tatgcagattctgcttacgtggtggaatgagggacaaaaaatggaagaatatgaaattatagggacaaaatctaaatcttttttttttatagggactaaa 23383544  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    | |||||||| |||||||||||| |||||||||  ||||||||||    
T  23383543 accggaattcactaatattacagagacgaaaagaagtatttaccc 23383499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 31851382 - 31851242
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| ||||| ||| || |||||||| || ||||||||||||||  |||| |||||||||         ||||| ||||| ||    
T  31851382 tatgcagattctgctgacgtggtgaaaagagagatcaaaagtggaaaaatatgaaattacaatgacagaatctaaat-ttttttttacaggaactaaaat 31851284  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
    || ||||| ||||||||| | |||||||||| ||||||||||    
T  31851283 cgaaattcactaatattaaaaggacgaaaagaggtatttacc 31851242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 44816978 - 44816901
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||||||| ||||| || || ||||||||||||||| |||||| |||||||||||||||| |||| |||||    
T  44816978 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaaatc 44816901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 41600101 - 41599958
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat-cnnnnnnnnacagggactaata 162  Q
    ||||||||||||||| ||||| || || |||||| |||| ||| |||||| |||||||||||||||| |||||||||          | | ||||||| |    
T  41600101 tatgcagattctgctaacgtggtggaatgagggatcaaatgtggaagaatctgaaattacagggacaaaatctaaatatttttttttatatggactaaaa 41600002  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
     || ||||||||||||||||||||| |||||| |||||||||||    
T  41600001 ccgaaattcgctaatattacagggatgaaaagaggtatttaccc 41599958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 24195198 - 24195250
Alignment:
Q  154 ggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  24195198 ggactaaaatcagaattcgctaatattacagggacgaaaagaggtatttaccc 24195250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 33162770 - 33162915
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaat 161  Q
    ||||||||||||||||||||| ||||| ||  ||| ||||||| |||||| ||||||||||  ||||||||| |||||          | | |||||||     
T  33162770 tatgcagattctgctgacgtggtgaaatgaaagactaaaagtggaagaatttgaaattacaatgacataatccaaatcttttttttttataaggactaaa 33162869  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |  | |||||||||||||||||| ||||||||| ||||||||||||    
T  33162870 acagaaattcgctaatattacagagacgaaaagaggtatttaccct 33162915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 20963638 - 20963561
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||||||| | |||  | || ||||||||||||||| |||||| | |||||||||||||  ||||||||||    
T  20963638 tatgcagattctgcttatgtggcggaatgagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatc 20963561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 14646972 - 14647030
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||| | ||||||||||| ||||||||||||| ||||  |||||| ||||||    
T  14646972 acagggactaaaaccggaattcgctcatattacagggactaaaaagggtattaacccta 14647030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 20419695 - 20419732
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacagggac 129  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  20419695 gagggaccaaaagtggaggaatatgaaattacagggac 20419732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 20963654 - 20963691
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacagggac 129  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  20963654 gagggaccaaaagtggaagaatatgaaattacaaggac 20963691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 24194978 - 24194929
Alignment:
Q  93 agggaccaaaagtgaaag-aatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||||||| || ||| |||||||||||||||| ||||||||||    
T  24194978 agggaccaaaagtgagaggaatctgaaattacagggacaaaatctaaatc 24194929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 1250349 - 1250273
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat 140  Q
    ||||||||||| ||||||||| || || ||| ||||||||||| |||||| | |||||| | ||||| ||| |||||    
T  1250349 tatgcagattcagctgacgtggtggaatgagagaccaaaagtggaagaatctaaaattaaaaggacaaaatttaaat 1250273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 31852169 - 31852209
Alignment:
Q  167 aattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||| ||||||||||||||||||||| |||||| |||||    
T  31852169 aattcgttaatattacagggacgaaaagaggtattaaccct 31852209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 1595 - 1410
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  1595 ggaccaaaagtgggaggaatctgaaattatagggacgtaatttatgtagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaatt 1496  T
Q  122 acagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||||||||||        ||||||||||| |||| ||||||| |||||||| ||| ||||||| ||||||||||||    
T  1495 acagggacataatctaaatcttttttttacagggactaaaatcgaaattcgcaaatattaccgggtcgaaaagaggtatttaccct 1410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 1645 - 1785
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||| ||| |||   ||||||||||||||| |||||| |||||||||| ||||||||||||| |         | ||||||||| |     
T  1645 tatgcagattctgctgatgtggtgatgtgagggaccaaaagtggaagaatctgaaattacaaggacataatctaatt---ttttttatagggactaaaac 1741  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||| ||||||||||||||||||||| || |||||||||    
T  1742 cggaattcgttaatattacagggacgaaaagagggatttaccct 1785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 4e-60; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 9481371 - 9481182
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||| | ||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  9481371 acagggaccaaaactaggaggaatctgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaattggaagaatatga 9481272  T
Q  118 aattacagggacataatctaaat-cnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||||||||||||| |        ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  9481271 aattacagggacataatctaaatccttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 9481182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 32017696 - 32017882
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||||||||||||| |||||| |||||||| | ||| |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  32017696 agggaccaaaagtgg-aggaatttgaaattacagggatgtaatttatgcatattccgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaa 32017794  T
Q  120 ttacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||| ||||||||||        ||||||||||| | ||||||||||||||||||||||||||||||| | ||||||||||    
T  32017795 ttacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttaccct 32017882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 10321926 - 10322036
Alignment:
Q  24 accaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattac 123  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  10321926 accaaaagtgggaggaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggaaggaccaaaagtgaaagaatctgaaattac 10322025  T
Q  124 agggacataat 134  Q
    |||||||||||    
T  10322026 agggacataat 10322036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 24732125 - 24731933
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| || |||| |||||||||||||||||||||||  |||||| |||||    
T  24732125 agggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgtagattatgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaa 24732026  T
Q  120 ttacagggacataatctaa----atcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||| |||||||     |         ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  24732025 ttacagggacaaaatctaatttttttttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttacccta 24731933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 207
Target Start/End: Complemental strand, 30618142 - 30617966
Alignment:
Q  26 caaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacag 125  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||    
T  30618142 caaaagtgggag-aatctgaaattacagggacgtaatttatgcagattctgctgacgtgataaaaggagggaccaaaagtggaacaatatgaaattacag 30618044  T
Q  126 ggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||| |||||||||           | ||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||    
T  30618043 ggacaaaatctaaattttttta----aaggactaaaatcagaattcactaatattacagggacgaaaagaggtatttaccct 30617966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 33637746 - 33637625
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||| | |||    
T  33637746 agggaccaaaagtgggaggaatctgaaattacagggacgtaatctatgcagattctgctgacgtaatgaaaggagggaccaaaagtggaagaatctaaaa 33637647  T
Q  120 ttacagggacataatctaaatc 141  Q
    ||||| | ||| ||||||||||    
T  33637646 ttacaagaacaaaatctaaatc 33637625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 3230056 - 3230217
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||||||||||| |||||||| | |||||| |||||||||||||||| ||||||||||||| ||  ||||||||||||||||||||||||||    
T  3230056 ggaccaaaagtgggaggaatatgaaattacagggacgtgatttatgcagattctgttgacgtgatgaaaaga-tgaccaaaagtgaaagaatatgaaatt 3230154  T
Q  122 acagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattaca 183  Q
    | | ||||| ||||||||||         ||||||||||| ||||||||||||||||||||||    
T  3230155 atatggacaaaatctaaatcttttattttacagggactaaaatcggaattcgctaatattaca 3230217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 18500457 - 18500314
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || ||||||||||||||| ||||||||||||||||||||||| ||||||||||        ||||||||||| |     
T  18500457 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttcttacagggactaaaac 18500358  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    || ||||||||||||||| |||||||||||| ||||||||||||    
T  18500357 cgaaattcgctaatattatagggacgaaaagaggtatttaccct 18500314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 30459094 - 30459207
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||||||||||| |||||||| | |||||||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||| |||||||    
T  30459094 ggaccaaaagtgggaggaatttgaaattatagggacgtaatttatggagattatgctaacgtgatgaaaggagagaccaaaagtgaaagaatctgaaatt 30459193  T
Q  122 acagggacataatc 135  Q
    |||  |||||||||    
T  30459194 acaatgacataatc 30459207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 26385467 - 26385649
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||| |||||||||| |||||||| | ||||||| |||||||| ||| ||   || |||||||||||| ||||||||||| ||||||||||    
T  26385467 acagggaccaaaactgggaggaatatgaaattacagggacgta-tttatgcatattatg---acttgatgaaaggagagaccaaaagtggaagaatatga 26385562  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtattta 203  Q
    |||| |||| |||  |||||||||         ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  26385563 aattgcaggaacaacatctaaatctttgtttttacagggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 26385649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 2299503 - 2299693
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||  ||||||| |||||| |||||||    
T  2299503 ggaccaaaagtgggaggaatctgaaat-acagggacgtaatttatgcagattctgttgacttgatgaaaggagggataaaaagtggaagaatctgaaatt 2299601  T
Q  122 acagggacataatctaa-----atcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||| ||||||      ||         ||||| ||||| | |||||||||||||||||||||| |||||||| | |||||||||||    
T  2299602 acagggacaaaatctattatttatttttttttaacaggaactaaaaccggaattcgctaatattacaggaacgaaaagagatatttacccta 2299693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 24732173 - 24732316
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||| ||||| || || ||||||||||||||| ||||||||||||||||| ||||| ||||||||||         ||||||||||| |    
T  24732173 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacatggacaaaatctaaatctttttttttacagggactaa-a 24732271  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    | |||||||||||||||||||||||||||||| ||||||||||||    
T  24732272 ttggaattcgctaatattacagggacgaaaagaggtatttaccct 24732316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 18500536 - 18500641
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||| | | ||||||||||| | |||| |||||||||||||||||| || | |||||||||||||||||||||||| |||||| | |    
T  18500536 acagggaccaaaagtggaaaggatctgaaattacagggacataatttatgcagattctgttgccttgatgaaaggagggaccaaaagtggaagaatctaa 18500635  T
Q  118 aattac 123  Q
    ||||||    
T  18500636 aattac 18500641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 10321873 - 10321745
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||| ||||||||||| ||||| |||||| |||||||| ||||||||||||||||||||| |||||||||            |||||||||| |     
T  10321873 tatgcagatactgctgacgtggtgaaatgagggagcaaaagtgtaagaatatgaaattacagggatataatctaa--tattttttttcagggactaaaac 10321776  T
Q  164 cggaattcgctaatattacagggacgaaaag 194  Q
    |||||||||||||||||||||||||||||||    
T  10321775 cggaattcgctaatattacagggacgaaaag 10321745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 26385417 - 26385278
Alignment:
Q  68 cagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaatatcgg 166  Q
    ||||||||||| ||||| || || ||||||||||||||| |||||||| |||||||||||||| ||||||||||         ||| ||||||| | | |    
T  26385417 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatataaaattacagggacaaaatctaaatctttttttctacatggactaaaaccag 26385318  T
Q  167 aattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  26385317 aattcgctaatattacagagacgaaaagaggtatttaccc 26385278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 9854122 - 9854198
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat 140  Q
    |||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  9854122 tatgcagattttgctgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaat 9854198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 33637763 - 33637829
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggaca 130  Q
    ||||||||||||||||||||| || || |||||| ||||||||||||||||||||||||||||||||    
T  33637763 tatgcagattctgctgacgtggtggaatgagggatcaaaagtgaaagaatatgaaattacagggaca 33637829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 33714630 - 33714495
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc---nnnnnnnnacagggac--t 158  Q
    ||||||||||||||| ||||| || || ||||||||||||||| ||||||||||||||||| ||||| ||||||||||           ||||||||  |    
T  33714630 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttttacagggactat 33714531  T
Q  159 aatatcggaattcgctaatattacagggacgaaaag 194  Q
    || | |||||||||||||||||||||||||||||||    
T  33714530 aaaaccggaattcgctaatattacagggacgaaaag 33714495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 14681025 - 14680949
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat 140  Q
    ||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||||||  |||| |||||||||    
T  14681025 tatgcagattctgctgacgtggtgaaatgaaggaccaaaagtggaagaatatgaaattacaaagacaaaatctaaat 14680949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 19284258 - 19284130
Alignment:
Q  78 tgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaa 176  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||         ||  ||||||| |  ||||||||||||    
T  19284258 tgacatgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttacgtggactaaaactggaattcgctaa 19284159  T
Q  177 tattacagggacgaaaagtggtatttacc 205  Q
    ||||||| | |||||||| ||||||||||    
T  19284158 tattacatgaacgaaaagaggtatttacc 19284130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 33714676 - 33714734
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctg 76  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  33714676 acagagaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctg 33714734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 30459044 - 30458967
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||||||||||||| ||||| ||| ||| ||||||  |||||| ||||||||||| |||||||||||||||    
T  30459044 tatgcagattctgctgacgtggtgaaatgagagactaaaagttgaagaatctgaaattacagtgacataatctaaatc 30458967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 18500655 - 18500711
Alignment:
Q  154 ggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctatt 210  Q
    ||||||| | || |||||||||||||||||||||||||||| |||||||||||||||    
T  18500655 ggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccctatt 18500711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 9154990 - 9154884
Alignment:
Q  97 accaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnn-acagggactaatatcggaattcgct-aatattacagggacgaaaag 194  Q
    ||||||| || |||||| |||||||||||||||| ||||||||||         ||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  9154990 accaaaactggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgctaaatattacagggaggaaaag 9154891  T
Q  195 tggtatt 201  Q
     ||||||    
T  9154890 aggtatt 9154884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 14681075 - 14681193
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||| ||| |||||||||||| | ||||||||| | |||||||||| |||||||  | |||  |||||||||||||| | |||| | |||||    
T  14681075 ggaccaaaagtgagagtaatctgaaattacagggacgtaatatgtgcagattctactgacgtagttaaataagggaccaaaagtggaggaatctaaaatt 14681174  T
Q  122 acagggacataatctaaat 140  Q
     || ||||| | |||||||    
T  14681175 gcaaggacaaagtctaaat 14681193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 17142798 - 17142744
Alignment:
Q  86 tgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat 140  Q
    ||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  17142798 tgaaacgagagaccaaaagtggaagaatttgaaattacagggacataatctaaat 17142744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 9481417 - 9481494
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    |||||| ||| |||||||||| || ||  |||||||||||||| |||||| |||||||||| ||||| ||||||||||    
T  9481417 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc 9481494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 17142827 - 17142930
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||||| |||||||||||||||| | |||| |||||||| |||| |||  ||||||| | |||  | |||||||||||| |  |||||||    
T  17142827 acagggaccaaaagtgagaggaatctgaaattacagggacctaatttatacagaatctattgacgtggttaaa-aaaggaccaaaagtggagaaatatga 17142925  T
Q  118 aatta 122  Q
    |||||    
T  17142926 aatta 17142930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 21070859 - 21070919
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctatt 210  Q
    |||| |||||||| ||||||||||| ||||||||||||| ||||| |||||| ||||||||    
T  21070859 acagagactaataccggaattcgctcatattacagggactaaaaggggtattaaccctatt 21070919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 30618196 - 30618272
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat 140  Q
    |||| |||||||||||||||| || ||  || ||| ||||||| |||||| | |||||||||||||| |||||||||    
T  30618196 tatgtagattctgctgacgtggtggaataagagacaaaaagtggaagaatctaaaattacagggacaaaatctaaat 30618272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 32017679 - 32017619
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattaca 124  Q
    ||||||||||||||||||||| || ||  | |||||||||||| |||||| ||||||||||    
T  32017679 tatgcagattctgctgacgtggtggaataaaggaccaaaagtggaagaatctgaaattaca 32017619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 21069570 - 21069514
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||| | ||||||||||| ||||||||||||| ||||  |||||| ||||    
T  21069570 acagggactaaaaccggaattcgctcatattacagggactaaaatgggtattaaccc 21069514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 3018199 - 3018014
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3018199 agggaccaaaagtgggaggaatgtgaaattacaaggccgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaa 3018100  T
Q  120 ttacagggacataatctaaatc--nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtattta 203  Q
    ||||||||||| ||||||||||          || |||||||| | ||||||||||||||||||||||||||||||| ||||||||    
T  3018099 ttacagggacaaaatctaaatcttttttttttaccgggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 3018014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 15640896 - 15640728
Alignment:
Q  26 caaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacag 125  Q
    ||||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15640896 caaaagtgggaggaatctgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacag 15640797  T
Q  126 ggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaag 194  Q
    ||||| ||||||||||        ||||| ||||| | |||||||||||||||||||||||||||||||    
T  15640796 ggacaaaatctaaatcttttttttacaggaactaaaaccggaattcgctaatattacagggacgaaaag 15640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 46046613 - 46046802
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| |||||| |||    
T  46046613 acagggaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggatcaaaagtggaagaatctga 46046712  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||| ||||||||||         ||||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||    
T  46046713 aattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacgaaaa-aggtatttaccct 46046802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 13132134 - 13132320
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||    
T  13132134 ggaccaaaagtgggagaaatatgaaattacaaggacgtaatttatgcagattctgctgatttgatgaaagaagggaccaaaagtggaagaatatgaaatt 13132233  T
Q  122 acagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctat 209  Q
    ||||||||| ||||||||||        ||| ||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||    
T  13132234 acagggacagaatctaaatcttttttttaca-ggactaaaatcgaaattcgctaatattacagggacgaaaataggtatttaccctat 13132320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 9396888 - 9396702
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||    
T  9396888 acagggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatttga 9396789  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtattta 203  Q
    ||||| ||||||| ||||||||||         |||| |||||| |||| |||||||||||||||||||||||||||| ||||||||    
T  9396788 aattatagggacaaaatctaaatcttttttttaacagagactaaaatcgaaattcgctaatattacagggacgaaaagaggtattta 9396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 3273807 - 3273619
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||||||    
T  3273807 ggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatatgaaatt 3273708  T
Q  122 acagggacataatc--taaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||| ||||  ||||          || |||||||| ||||||||||||||||||||||||||||||||| | |||||||||||    
T  3273707 acagggacaaaatctataaaaaaaaaaattacggggactaaaatcggaattcgctaatattacagggacgaaaagagatatttacccta 3273619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 38574157 - 38574348
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||| |||||||||||||||||||||||||||| | ||||| |||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  38574157 acagagaccaaaagtgggaggaatctgaaattacagggacgcaattgatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatatga 38574256  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||| ||||||||||         ||||||||||| | | ||||||||||||||||||||||||||||  |||||||| ||||    
T  38574257 aattacagggacaaaatctaaatctttttatttacagggactaaaaccagaattcgctaatattacagggacgaaaaaaggtatttatccta 38574348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 9516799 - 9516997
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| || |||| |||||||||||||||||||||||  |||||| |||    
T  9516799 acagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgtagattttgttgacttgatgaaaggagggaccaaaagtagaagaatctga 9516898  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattattta 215  Q
    ||||||||||||| ||||||||||         |||| |||||| | || |||||||||||||||||||||||||||| | ||||||||| ||| ||||    
T  9516899 aattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgctaatattacagggacgaaaagagatatttacccaatttttta 9516997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 37012900 - 37013085
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||| ||| |||| |||||||| | |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  37012900 ggaccaaaagtaggaagaatatgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggagtgaccaaaagtggaagaatatgaaatt 37012999  T
Q  122 acagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||| ||||||| |         ||||||||||| | | ||||||||||||||||||||||||||| | ||||||||||||    
T  37013000 acagggacaaaatctaatttttttttatacagggactaaaaccagaattcgctaatattacagggacgaaatgaggtatttaccct 37013085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 34064171 - 34064294
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||    
T  34064171 acagggaccaaaagtaggaggaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatctga 34064270  T
Q  118 aattacagggacataatctaaatc 141  Q
    |||||||| |||| ||||||||||    
T  34064271 aattacagagacaaaatctaaatc 34064294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 4356066 - 4355907
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  4356066 ggaccaaaagtaggaggaatctgaaattacaaggacgtaatttatgcagattctgctaacgtgatgaaatgagggaccaaaagtgaaagaatatgaaatt 4355967  T
Q  122 acagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatatta 181  Q
    |||  |||| |||||||| |        ||||| ||||| | ||||||||||||||||||    
T  4355966 acatagacaaaatctaaagcttgtttttacaggaactaaaaccggaattcgctaatatta 4355907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 9619168 - 9618982
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||| |||||||||| |||||||| | ||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||| |||    
T  9619168 acagggaccaaaaatgggaggaatatgaaattacagggacgta-tttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctga 9619070  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttac 204  Q
    ||||||||||||| ||||||||||         ||||||||||| | |||||||||||||||||||| |||||||||  |||||||||    
T  9619069 aattacagggacaaaatctaaatctttgtttttacagggactaaaaccggaattcgctaatattacatggacgaaaataggtatttac 9618982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 21 - 207
Target Start/End: Original strand, 31090253 - 31090440
Alignment:
Q  21 gggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaat 120  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||| |||||||  |||| |||||||||||||||||||||||  |||||| ||||||    
T  31090253 gggaccaaaagtgggagaaatctgaaattacaaggacgtaatttatgtagattctattgacttgatgaaaggagggaccaaaagtagaagaatctgaaat 31090352  T
Q  121 tacagggacataatctaa-atcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||||| |||||||  |         ||||||||||| |||| |||||||||||||||||||||||||||| | ||||||||||    
T  31090353 tacagggacaaaatctaattttttttttttacagggactaaaatcgaaattcgctaatattacagggacgaaaagagatatttaccct 31090440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 26252455 - 26252337
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||    
T  26252455 agggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaa 26252356  T
Q  120 ttacagggacataatctaa 138  Q
    ||||||||||| |||||||    
T  26252355 ttacagggacaaaatctaa 26252337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 31944135 - 31943948
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||||||||||||| | |||| ||||| |||||| || || ||||||||||||||||| ||||||||||| ||||||||||||||    
T  31944135 ggaccaaaagtgggaggaatctgaaattacatggacataattgatgcaggttttgttgacgtgatgaaaggagagaccaaaagtggaagaatatgaaatt 31944036  T
Q  122 acagggacataatctaaatc--nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||| ||||||||||          ||||| ||||| | |||||||||||||||||||||||||||||||  ||||||||||||    
T  31944035 acagggacaaaatctaaatcttttttatttacaggaactaaaaccggaattcgctaatattacagggacgaaaag-agtatttacccta 31943948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 18713145 - 18713026
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||    
T  18713145 ggaccaaaagagggaggaatctgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggagggaccaaaattggaacaatatgaaatt 18713046  T
Q  122 acagggacataatctaaatc 141  Q
    ||||||||| ||||||||||    
T  18713045 acagggacaaaatctaaatc 18713026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 205
Target Start/End: Complemental strand, 35376346 - 35376164
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    |||||||||||||||||||||||||   ||| | |||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||| | |||    
T  35376346 agggaccaaaagtgggaggaatctg---ttacatggacttaatttatgcggattctgctgacgtgatgaaaggagagaccaaaagtggaagaatctaaaa 35376250  T
Q  120 ttacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
    |||||| |||| ||||||||||        ||||||||||| | | ||||||||||||||||||||||||||||  ||||||||||    
T  35376249 ttacagagacaaaatctaaatcttttttttacagggactaaaaccagaattcgctaatattacagggacgaaaataggtatttacc 35376164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 48580060 - 48580239
Alignment:
Q  23 gaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatta 122  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||||| || ||||||||||||    
T  48580060 gaccaaaagtgggaggaatttgaaattacaaggacgtaatttatgcatattctgctaaggtgatgaaaggagggaccaaaagtggaacaatatgaaatta 48580159  T
Q  123 cagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatt 201  Q
    |||||||| ||||||||||         |   ||| ||| | ||||||||||||||||||||||||||||||| ||||||    
T  48580160 cagggacaaaatctaaatcgttttttttatcaggattaaaaccggaattcgctaatattacagggacgaaaagaggtatt 48580239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 7819199 - 7819080
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||||||||||||| | |||||||||| ||||||||| | || |||||||||||||||| |||||||||| |||||| |||||||    
T  7819199 ggaccaaaagtgggaggaatctgaaattacatggacgtaattgatgcagattttactaacgtgatgaaaggaggaaccaaaagtggaagaatctgaaatt 7819100  T
Q  122 acagggacataatctaaatc 141  Q
    ||||||||| ||||||||||    
T  7819099 acagggacaaaatctaaatc 7819080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 38574111 - 38573968
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| || || ||||||||||||||| ||||||||||||||||||||||| ||||||||||        ||||||| ||| ||    
T  38574111 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggattaaaat 38574012  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||    
T  38574011 cggaattcactaatattacatggacgaaaagaggtatttaccct 38573968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 18667478 - 18667375
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| || ||||||||||||||||||||||||||||| || |||||||    
T  18667478 acagggaccaaaagttggaggaatctgaaattacagggacgtaatttatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaacaatatga 18667379  T
Q  118 aatt 121  Q
    ||||    
T  18667378 aatt 18667375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 9396934 - 9397078
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| || || || || ||||||||| |||||| |||||||||||||||| ||||||||||        ||||||||||| |     
T  9396934 tatgcagattctgctgacgtgttggaatgatggtccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaac 9397033  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||    
T  9397034 cggaatttgctaatattacagggacgaaaagaagtatttacccta 9397078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 39 - 206
Target Start/End: Original strand, 41947066 - 41947232
Alignment:
Q  39 aatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaa 138  Q
    |||||||||||| | ||||||||||||||||||||||| |||| | ||||||| |||||||||||||| || |||||||||||||| ||||| ||||| |    
T  41947066 aatctgaaattacagggacgtaatttatgcagattctgttgactttatgaaagcagggaccaaaagtggaaaaatatgaaattacaaggacaaaatct-a 41947164  T
Q  139 atcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||         | | ||||||| | || |||||||||||||||||||||||||||| | |||||||||    
T  41947165 attttttttttaaaaggactaaaaccgaaattcgctaatattacagggacgaaaagagatatttaccc 41947232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 9516753 - 9516611
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||| ||||| || || ||||||||||||||| ||||||||||||||||| ||||| ||||||||||         ||| ||||||| |    
T  9516753 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacaaggactaaaa 9516654  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
     ||||||||||||||||||||||||||||||| | ||||||||    
T  9516653 ccggaattcgctaatattacagggacgaaaagagatatttacc 9516611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 209
Target Start/End: Complemental strand, 46046567 - 46046427
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||||||||| || ||||| || || |||||| |||||||| ||||||||||||||||||||||| ||||||  |         ||||||||||| ||    
T  46046567 tatgcagattctactaacgtggtggaatgagggatcaaaagtggaagaatatgaaattacagggacaaaatctattt-----ttttacagggactaaaat 46046473  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccctat 209  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||    
T  46046472 cggaattcgctaatattacagggacgaaaaaaggtatttaccctat 46046427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 3273855 - 3273996
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||||||||| |||||||| ||||| |||||| |||||||| |||||| |||||||||||||| | ||||||||||        | ||||||||| |     
T  3273855 tatgcagattctactgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacagggataaaatctaaatcttttttttatagggactaaaac 3273954  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    || |||||||||||||||| ||||||||||| |||||||||||    
T  3273955 cgaaattcgctaatattac-gggacgaaaagaggtatttaccc 3273996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 31090204 - 31090060
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaat 161  Q
    |||||| |||||||| ||||| || || ||||||||||||||| ||||||||||||||||||||||| ||||||||||          |||||||||||     
T  31090204 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaa 31090105  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    |||| ||||| |||||||||||||||| |||||  ||||||||||    
T  31090104 atcgaaattcactaatattacagggacaaaaagaagtatttaccc 31090060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 68 - 207
Target Start/End: Original strand, 9619218 - 9619358
Alignment:
Q  68 cagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaatatcgg 166  Q
    ||||||||||| ||||| || || || |||||||||||| ||||||||||||||||| ||||| ||||||||||         ||||||||||| | | |    
T  9619218 cagattctgcttacgtggtggaatgaaggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttctacagggactaaaaccag 9619317  T
Q  167 aattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  9619318 aattcgctaatattacagggacaaaaagaggtatttaccct 9619358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 15640950 - 15641093
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaat 161  Q
    |||||| |||||||||||||| ||||| |||| |||||||||| |||||| |||||||||||||||||||||||||||          ||||| | |||     
T  15640950 tatgcatattctgctgacgtggtgaaatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttttacaggaattaaa 15641049  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
    | |||||||| ||||||||||| |||||||||| ||||||||||    
T  15641050 accggaattcactaatattacaaggacgaaaagaggtatttacc 15641093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 48259986 - 48260126
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||||||| ||||||||||||| || ||| || |||||||| |||||| |||||||||||||||| ||||||||||        |||| || ||| ||    
T  48259986 tatgcagattatgctgacgtgatggaatgagcgatcaaaagtggaagaatttgaaattacagggacaaaatctaaatcttttttttacagagattaaaat 48260085  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttac 204  Q
    |  |||||||||||||||||||||||||||| | |||||||    
T  48260086 caaaattcgctaatattacagggacgaaaagagatatttac 48260126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 26252472 - 26252615
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||| ||||  || || | ||||||||||||| ||||||||||||||||||||||| ||||||||||         ||||| ||||| |    
T  26252472 tatgcagattctgcttacgtagtggaatgggggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaaaa 26252571  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
      |||||||||||||||||||||||||||||| | |||||||||    
T  26252572 ctggaattcgctaatattacagggacgaaaagagatatttaccc 26252615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 3018247 - 3018393
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||||||| |||||||||| || ||  ||||||||||||||  ||||| |||||||||| ||||| ||||||||||        ||||||||||| |     
T  3018247 tatgcagattatgctgacgtggtggaataagggaccaaaagtggtagaatctgaaattacacggaca-aatctaaatcttttttttacagggactaaaac 3018345  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccctatta 211  Q
    || |||||| ||||||||||||||||||||| | |||| |||||||||    
T  3018346 cgaaattcgttaatattacagggacgaaaagagatattaaccctatta 3018393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 35376367 - 35376502
Alignment:
Q  68 cagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcgga 167  Q
    |||||| |||||||||| || || ||||||||||||||| |||| | |||||||||||||||| ||| ||||||        ||||||||||| |  |||    
T  35376367 cagattttgctgacgtggtggaatgagggaccaaaagtggaagattctgaaattacagggacaaaatttaaatcttttttttacagggactaaaactgga 35376466  T
Q  168 attcgctaatattacagggacgaaaagtggtattta 203  Q
    ||| ||||||||||||||||||||||| | ||||||    
T  35376467 atttgctaatattacagggacgaaaagagatattta 35376502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 13132084 - 13131943
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaat 161  Q
    ||||||||||||||||||||| ||||| |||||| |||||||| |||||| |||||||||| | ||||||||||||||          |||||||||||     
T  13132084 tatgcagattctgctgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacatgaacataatctaaatcttttttttttacagggactaaa 13131985  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtattta 203  Q
    |  | |||||| |||||||||| |||||||||| ||||||||    
T  13131984 acagaaattcgttaatattacaaggacgaaaagaggtattta 13131943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 37012850 - 37012712
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||||||||| || ||  |||||||||||||| |||||| |||||||||||||||| ||||||||||         ||| ||||| | |    
T  37012850 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacaaggactgaaa 37012751  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatt 201  Q
    |  |||||||||||||||||| |||||||||| ||||||    
T  37012750 ttagaattcgctaatattacaaggacgaaaagaggtatt 37012712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 31218303 - 31218362
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctat 209  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  31218303 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccctat 31218362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 34064125 - 34063983
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    |||| |||||| ||||| ||| || || ||||||||||||||| |||||| ||||||||||| |||| ||||||||||         ||||||||||| |    
T  34064125 tatgtagattcggctgatgtggtggaatgagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatctttttttttacagggactaaaa 34064026  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
       ||||||| ||||||||||||||||||||| ||||||||||    
T  34064025 ctagaattcgttaatattacagggacgaaaagaggtatttacc 34063983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 7819249 - 7819322
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatcta 137  Q
    ||||||||||||||||||||| || || ||||||||||||||| |||||| ||| |||||||||||| ||||||    
T  7819249 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgacattacagggacaaaatcta 7819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 216
Target Start/End: Original strand, 31944185 - 31944338
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat-cnnnnnnnnacagggactaata 162  Q
    ||||||||||||| ||||||| || || ||||||| ||||||| ||||||||||||||||| ||||| ||||||| |          |||| |||||| |    
T  31944185 tatgcagattctgttgacgtggtggaatgagggacaaaaagtggaagaatatgaaattacatggacaaaatctaattatttttttttacagagactaaaa 31944284  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttat 216  Q
     || ||||||||||||||||| ||||||||||  ||||||||||| | ||||||    
T  31944285 ccgaaattcgctaatattacaaggacgaaaagaagtatttaccctttaatttat 31944338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 41947020 - 41946957
Alignment:
Q  151 cagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattattt 214  Q
    |||||||||| | |||||||| |||||||||||||||||||||| |||||||||||| ||||||    
T  41947020 cagggactaaaaccggaattcactaatattacagggacgaaaagaggtatttacccttttattt 41946957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 4356116 - 4356253
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| || ||  |||||||||||||| |||||| ||||||||||| |||| |||| || |         |||| || ||| |     
T  4356116 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagagacaaaatcaaattttttttattacagagattaaaac 4356215  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatt 201  Q
    || ||||||||||||||||||||| |||||| ||||||    
T  4356216 cgaaattcgctaatattacagggatgaaaagaggtatt 4356253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 36888917 - 36889057
Alignment:
Q  66 tgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcg 165  Q
    ||||||||||||||||  | | ||| ||||||| ||||||| | |||| ||||||||||||||||||||||||||         ||| ||||||| | |     
T  36888917 tgcagattctgctgacaaggttaaacgagggactaaaagtggaggaatctgaaattacagggacataatctaaattttttttttaca-ggactaaaacca 36889015  T
Q  166 gaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
     ||||||||||||||| |||||| |||||||||||| |||||    
T  36889016 aaattcgctaatattatagggaccaaaagtggtattaaccct 36889057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 48580009 - 48579932
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    |||| |||||||||||||||| || ||  ||||||||||| ||||||||| ||||||||||| |||| ||||||||||    
T  48580009 tatgtagattctgctgacgtggtggaataagggaccaaaattgaaagaatctgaaattacagagacaaaatctaaatc 48579932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 18713195 - 18713353
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagg---gactaa 160  Q
    |||| |||||||||||||||| || ||  ||||||||||| || |||||| ||||||||||| |||| ||||||||||        |||||   ||||||    
T  18713195 tatgtagattctgctgacgtggtggaataagggaccaaaactggaagaatctgaaattacagagacaaaatctaaatcttttttttacagggacgactaa 18713294  T
Q  161 tatcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttatata 219  Q
     | || || ||||||||| |||||| |||||||| |||||| ||||| || ||||||||    
T  18713295 aaccgaaactcgctaataatacaggtacgaaaagaggtattaaccctgttctttatata 18713353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 18667627 - 18667681
Alignment:
Q  165 ggaattcgctaatattacagggacgaaaagtggtatttaccctattatttatata 219  Q
    |||||||||||||||||||||||||||||| |||||| ||||| || ||||||||    
T  18667627 ggaattcgctaatattacagggacgaaaagaggtattaacccttttctttatata 18667681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 20069538 - 20069679
Alignment:
Q  67 gcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcgg 166  Q
    ||||||||||||||| || |  || ||| ||||||||||| |||||| | |||| | |||||||||||||||| |        |||||||| || |  ||    
T  20069538 gcagattctgctgacatgtttcaatgagagaccaaaagtggaagaatctcaaatgatagggacataatctaaa-cttttttttacagggaccaaaactgg 20069636  T
Q  167 aattcgctaatattacagggacgaaaagtggtatttaccctat 209  Q
    |||||||| ||||||||||||||||||| | ||||||||||||    
T  20069637 aattcgctcatattacagggacgaaaagggatatttaccctat 20069679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 48259879 - 48259822
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||| ||| | ||||||||||||||||||||||||||||||| | ||||||||||    
T  48259879 acagggattaaaaccggaattcgctaatattacagggacgaaaagagatatttaccct 48259822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 201
Target Start/End: Complemental strand, 43312350 - 43312214
Alignment:
Q  66 tgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnn-acagggactaatatc 164  Q
    |||||||| |||||||  ||| ||| ||||||| ||||||| | |||| |||||||||||||||| ||| |||||          ||||||||||| |||    
T  43312350 tgcagattttgctgacaggattaaacgagggactaaaagtggaggaatctgaaattacagggacagaatttaaatttttttttttacagggactaaaatc 43312251  T
Q  165 ggaattcgctaatattacagggacgaaaagtggtatt 201  Q
    |||||| ||||||||||||||||| | ||||| ||||    
T  43312250 ggaatttgctaatattacagggaccagaagtgatatt 43312214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 207
Target Start/End: Complemental strand, 12904857 - 12904746
Alignment:
Q  96 gaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagt 195  Q
    ||||||||||| |||||| |||||||| | ||||| |||||||||         ||||||||||| | |  ||||||||||||||| ||||||||||||     
T  12904857 gaccaaaagtggaagaatctgaaattataaggacaaaatctaaattttttttttacagggactaaaaccaaaattcgctaatattatagggacgaaaaga 12904758  T
Q  196 ggtatttaccct 207  Q
    | ||||||||||    
T  12904757 gatatttaccct 12904746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 43313533 - 43313589
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||| | | ||||||||||||||||||| ||| |||||||||||| ||||    
T  43313533 acagggactaaaaccagaattcgctaatattacagagaccaaaagtggtattaaccc 43313589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 12520691 - 12520624
Alignment:
Q  152 agggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttatata 219  Q
    ||||||||| |  ||||||||||||||||| |||||| |||||||||||  |||||  ||||||||||    
T  12520691 agggactaaaactggaattcgctaatattatagggactaaaagtggtatgaacccttctatttatata 12520624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 50462733 - 50462776
Alignment:
Q  165 ggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||    
T  50462733 ggaattcgctaatattacagggaccaaaagaggtattaacccta 50462776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 31082226 - 31082184
Alignment:
Q  165 ggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||||| |||||| |||||||||||| ||||||||||||    
T  31082226 ggaattcgctcatattatagggacgaaaaggggtatttaccct 31082184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 36887736 - 36887679
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||| | |  |||||||||||||||||||||| ||||| |||||| |||||    
T  36887736 acagggactaaaaccaaaattcgctaatattacagggaccaaaagaggtattaaccct 36887679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 48259941 - 48259908
Alignment:
Q  17 aacagggaccaaaagtgggaggaatctgaaatta 50  Q
    |||||||||||||||| |||||||||||||||||    
T  48259941 aacagggaccaaaagtaggaggaatctgaaatta 48259908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 7819057 - 7819005
Alignment:
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccctattatttat 216  Q
    |||||||||||||||||| | || ||||||| |||||||| |||| |||||||    
T  7819057 cggaattcgctaatattatatggtcgaaaagaggtatttaacctaatatttat 7819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 9396918 - 9396882
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacaggga 128  Q
    ||||||||||||||| | |||||||||||||||||||    
T  9396918 gagggaccaaaagtggaggaatatgaaattacaggga 9396882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 18667524 - 18667596
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatct 136  Q
    |||||||||||| |||||||| || ||  |||||| |||| || |||||| ||||||||||||| || |||||    
T  18667524 tatgcagattctactgacgtggtggaataagggacaaaaactggaagaatctgaaattacagggtcaaaatct 18667596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 45970104 - 45969914
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||| |||    
T  45970104 acagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagagaccaaaagtgaaagaatctga 45970005  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||| ||||||||||         ||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||||    
T  45970004 aattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcactaatattacagggacgaaaagaggtatttaccct 45969914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 5800794 - 5800605
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||| | ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  5800794 acagggaccaaaactaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaaatggaagaatatga 5800695  T
Q  118 aattacagggacataatctaaat-cnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||||||||||||| |        ||||||||||| | || |||||| ||||||||||||||||||||| |||||||||||    
T  5800694 aattacagggacataatctaaatccttttttttacagggactaaaaccgaaattcgttaatattacagggacgaaaagaggtatttaccc 5800605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 14171775 - 14171966
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||| ||||||  ||    
T  14171775 acagggaccaaaagtgggaggaatctgaaattacaaggtcgtaattgatgcagattttgctgacgtgatgaaaggaaggaccaaaagtggaagaatcaga 14171874  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||| ||||||||||         ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  14171875 aattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttacccta 14171966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 14262225 - 14262415
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| ||||||||| |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||    
T  14262225 acagggatcaaaagtggaaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggactaaaagtggaacaatatga 14262324  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||| ||||||||||         ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||    
T  14262325 aattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccct 14262415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 14162060 - 14161871
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||| | ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14162060 acagggaccaaaattaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatga 14161961  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||||||||||||||         | ||| ||||| |  |||||||||||||||||||||||||||||| | |||||||||    
T  14161960 aattacagggacataatctaaatctttttttttataggaactaaaactggaattcgctaatattacagggacgaaaagagatatttaccc 14161871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 30500234 - 30500419
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  30500234 ggaccaaaagtgggaggaatctgaaattacagggatgtaatttatgtagattttgctgacgtgatgaaaggagggaccaaaagtggaacaatatgaaatt 30500333  T
Q  122 acagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||| |||||||||         ||||||||||| |  |||||||||||||||||||||||||||||| ||||||||||||    
T  30500334 acagggacaaaatctaaattttttttttacagggactaaaactggaattcgctaatattacagggacgaaaagaggtatttaccct 30500419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 9267168 - 9267354
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||  |||||| ||| |||    
T  9267168 ggaccaaaagtgggaggaatctgaaattacaaggacttaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgatatt 9267267  T
Q  122 acagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||| ||||||||          ||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||    
T  9267268 acagggacaaaatctaaaaaatttatatacagggactaaaatcggaattcgctaatattacaaggacgaaaagaggtatttacccta 9267354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 19112954 - 19113143
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||| |||    
T  19112954 acagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctga 19113053  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||| | ||||||||||         ||||||||||| | ||||||||| |||||||| |||||||||||| |||||||||||    
T  19113054 aattacagggataaaatctaaatctttttttttacagggactaaaaccggaattcgttaatattatagggacgaaaagaggtatttaccc 19113143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 33372595 - 33372404
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| || ||| |||    
T  33372595 acagagaccaaaagtgggaggaatctgaaattacaaggacttaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaataatctga 33372496  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||| ||||||||||         ||||| ||||| | | ||||||||||||||||||||||||||||| | |||||||||||    
T  33372495 aattacagggacaaaatctaaatctttttatttacaggaactaaaaccagaattcgctaatattacagggacgaaaagagatatttacccta 33372404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 45003685 - 45003486
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| |||||| |||    
T  45003685 acagggaacaaaagtgggaggaatctgaaattacaaggacgtaatttatacagattctgttgacgtgatgaaaggagggacaaaaagtggaagaatctga 45003586  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttat 216  Q
    ||||||||||||| ||||||||||         | ||||||| | | ||||||| ||||||||||| ||||||||||| | ||||||||| |||| ||||    
T  45003585 aattacagggacaaaatctaaatcttttattttatagggactgaaaccggaatttgctaatattacggggacgaaaagagatatttacccaattaattat 45003486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 21633081 - 21632900
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  21633081 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtgaaagaatctgaaatt 21632982  T
Q  122 acagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||||  ||||| |||         |||||||||||      |||||||||||||||||||||||||||| ||||||||||||    
T  21632981 acagggacaacatctagatctttttttttacagggactaa-----aaattcgctaatattacagggacgaaaagaggtatttaccct 21632900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 33 - 205
Target Start/End: Original strand, 52552892 - 52553065
Alignment:
Q  33 gggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacata 132  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |    
T  52552892 gggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaa 52552991  T
Q  133 atctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
    |||||||||         ||||||||||| |   |||||||||||||||||| ||||||||||  |||||||||    
T  52552992 atctaaatctttttttttacagggactaaaactagaattcgctaatattacaaggacgaaaagatgtatttacc 52553065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 16722180 - 16721990
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||| |||||||||||||||||||||| |  ||| |||||||||||||||||| |||| ||||||||| |||||||||||||| |||||| |||    
T  16722180 acagggaccagaagtgggaggaatctgaaattacagtgacataatttatgcagattctgttgacttgatgaaagaagggaccaaaagtggaagaatctga 16722081  T
Q  118 aattacagggacataatctaaa-tcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||| ||||| |||||||| |         |||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||    
T  16722080 aattacatggacaaaatctaaatttttttttttacagtgactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccct 16721990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 35995867 - 35996063
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||| ||||||||||||||||| ||  || |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| |||    
T  35995867 acagggacaaaaagtgggaggaatctaaatatacaaggacgtaatttatgcagattctgcggacgtgatgaaagaagggaccaaaagtggaagaatctga 35995966  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttat 216  Q
    |||||| | |||| | ||||| |         ||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||| || |||||    
T  35995967 aattactgagacaaattctaatt--tttttttacagggactaaaatcggaattcgctaatattacagggacgaaaagatgtatttacccttttttttat 35996063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 49986717 - 49986525
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  | |  |||||||||||| ||||||||||  |||||| |||    
T  49986717 acagggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctattaaattgatgaaaggagagaccaaaagtagaagaatctga 49986618  T
Q  118 aattacagggacataatctaaatc--nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||| ||||||||||          |||| |||||| | |||||||| |||||||||||||||||||||| |||||||||||||    
T  49986617 aattacagggacaaaatctaaatcttttttttttacagtgactaaaaccggaattctctaatattacagggacgaaaagaggtatttacccta 49986525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 15328649 - 15328463
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||||  ||| || ||||||||||    
T  15328649 acagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatga 15328550  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||| ||||||| |         ||||||||||| | || ||||  ||||||||||||| |||||||| |||||||||||    
T  15328549 aattacagggacaaaatctaatt--tttttttacagggactaaaaacgaaatttactaatattacaggaacgaaaagaggtatttaccc 15328463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 11003921 - 11003731
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||| ||| || |||| ||||||||||| |||||||||||| |||||| |||    
T  11003921 acagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcatattttgttgacttgatgaaaggatggaccaaaagtggaagaatctga 11003822  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||| ||||| ||||||| ||         ||||||||||| | ||||||||| |||||||||| |||| ||||| ||||||||||||    
T  11003821 aattacaaggacaaaatctaagtctttttatttacagggactaaaaccggaattcggtaatattacaaggacaaaaagaggtatttaccct 11003731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 43572580 - 43572387
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatga---aaggagggaccaaaagtgaaagaata 114  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||  |||||||||||||||| ||||||   |||||||||||||||||| ||||||     
T  43572580 acagggaccaaaagtgggaggaatatgaaattacagggacgtaattg-tgcagattctgctgacttgatgatgaaaggagggaccaaaagtggaagaatc 43572482  T
Q  115 tgaaattacagggacataatctaaa-tcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    |||||||||||||||| |||||||| |         ||||||||||| | || ||||||||||||||||||| ||||||||  ||||||||||||    
T  43572481 tgaaattacagggacaaaatctaaatttttctttttacagggactaaaaccgaaattcgctaatattacaggaacgaaaagatgtatttacccta 43572387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 20853885 - 20854075
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||| ||||| |||||||||||||||||||||| |  ||| ||||||||||||||| || |||| |||||||||||||||||||||||| |||||| |||    
T  20853885 acagagaccagaagtgggaggaatctgaaattacagtgacataatttatgcagattatgttgacttgatgaaaggagggaccaaaagtggaagaatctga 20853984  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||| ||||||||||         ||| ||||||| | || ||||||||||||||||| |||||||||| | |||||||||||    
T  20853985 aattacagggacaaaatctaaatctttttttttaca-ggactaaaaccgaaattcgctaatattacatggacgaaaagagatatttacccta 20854075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 9267118 - 9266974
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||| ||||| || || ||||||||||||||| ||||||||||||||||||||||| ||||||||||         ||||||||||| |    
T  9267118 tatgcagattctgcttacgtgctggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 9267019  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
     ||||||||||||||||||||||||||||||| ||||||||||||    
T  9267018 ccggaattcgctaatattacagggacgaaaagaggtatttaccct 9266974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 14171729 - 14171586
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| || || |||||| |||||||| |||||| |||||||||||||||| ||||||||||        ||||  | ||| ||    
T  14171729 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatttgaaattacagggacaaaatctaaatcttttttttacagaaattaaaat 14171630  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14171629 cggaattcgctaatattacagggacgaaaagtggtatttaccct 14171586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 38283735 - 38283548
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||| ||||||||||||||||| |||||| | |||||||| ||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||    
T  38283735 ggacaaaaagtgggaggaatcttaaattacagggacgtaacttatgtagattctgctgacgtgatgaaaggagggatcaaaagtggaacaatatgaaatt 38283636  T
Q  122 acagggacataatctaaa-tcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    | ||| ||| |||||||| |         ||| ||||||| | ||||||||| |||||||||||||| |||||| | |||||| ||||    
T  38283635 ataggaacaaaatctaaatttttttttttacaaggactaaaaccggaattcgttaatattacagggatgaaaagagatatttatccta 38283548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 17465560 - 17465746
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||| | ||| || |||||||||||||||||||||||||||||||||||| | || ||    
T  17465560 ggaccaaaagtgggaggaatctgaaattacagagacgtaatttatgtaaattttgttgacgtgatgaaaggagggaccaaaagtgaaagaatctaaagtt 17465659  T
Q  122 acagggacataatctaaatcnnnnnnnn-acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||| ||| |||||          |||| || ||| |  | ||||||||||||||||| |||||||||| ||||||||||||    
T  17465660 acagggacaaaatttaaatattttattttacagagattaaaactgaaattcgctaatattacaaggacgaaaagaggtatttaccct 17465746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 41 - 209
Target Start/End: Original strand, 17649222 - 17649390
Alignment:
Q  41 tctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat 140  Q
    |||||||||| | ||||||||||||||||||||||| |||| |||| ||||||| ||||||| ||| || ||| |||||||||||||||| |||||||||    
T  17649222 tctgaaattacagggacgtaatttatgcagattctgttgacttgataaaaggagagaccaaatgtggaataatctgaaattacagggacaaaatctaaat 17649321  T
Q  141 cnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctat 209  Q
    |         |||| ||||| | |||||||||||| |||||||||| ||||||| |||||||| |||||    
T  17649322 cttttttttccaggaactaaaaccggaattcgctagtattacagggtcgaaaagaggtatttaacctat 17649390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 4204851 - 4204709
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||        ||||| ||||| |     
T  4204851 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttacaggaactaaaac 4204752  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
     | |||||  ||||||||||||||||||||| ||| |||||||    
T  4204751 tgaaattcattaatattacagggacgaaaagaggtctttaccc 4204709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 19112908 - 19112760
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaat 161  Q
    ||||||||||||||| ||||| || ||  |||||||||||||| |||||||||||||| |||||||| ||||||||||          |||||||||||     
T  19112908 tatgcagattctgcttacgtggtggaataagggaccaaaagtggaagaatatgaaattccagggacaaaatctaaatcttttttttttacagggactaaa 19112809  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttaccctatt 210  Q
    | |||||||||||||||||||| |||||||||| |||||||||||||||    
T  19112808 accggaattcgctaatattacatggacgaaaagaggtatttaccctatt 19112760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 47575461 - 47575650
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||| |||| |||||||||| |||||||| | |||  |||||||||||||||||||||||||||||||||||| ||||||||||  || ||| |||    
T  47575461 acagggacaaaaaatgggaggaatttgaaattacagggatataatttatgcagattctgctgacgtgatgaaaggagagaccaaaagttgaaaaatctga 47575560  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||| |||| ||||||| |         ||||||||||| | | |||||| || ||||||| | |||||| || ||||||||||||    
T  47575561 aattacagagacaaaatctaatttttttttttacagggactaaaaccagaattcactcatattacggagacgaatagaggtatttaccct 47575650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 30500184 - 30500042
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| || ||  |||||||||||||| ||||||||||||||||||||||| |||||||||         ||||||||||| |     
T  30500184 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat-ttttttttacagggactaaaac 30500086  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    || ||||||||||||||||||||| |||||| |||||| |||||    
T  30500085 cgaaattcgctaatattacagggatgaaaagaggtattaaccct 30500042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 43572623 - 43572770
Alignment:
Q  61 atttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaa 160  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||         ||||| |||||    
T  43572623 atttacgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacagaatctaaattttttttttacaggaactaa 43572722  T
Q  161 tatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
     | ||||||| |  ||||||||||||| |||||| |||||||||||||    
T  43572723 aaccggaatttgtcaatattacagggatgaaaagaggtatttacccta 43572770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 217
Target Start/End: Original strand, 33372640 - 33372793
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnna-cagggactaata 162  Q
    ||||||||||||||||||||| || || | |||| |||||||| |||||| |||||||||||||||| ||||||||||        | |||| ||||| |    
T  33372640 tatgcagattctgctgacgtggtggaatg-gggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttaacaggaactaaaa 33372738  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttata 217  Q
    ||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  33372739 tcgaaattcgctaatattacggggacgaaaagaggtatttaccctattttttata 33372793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 16722226 - 16722371
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||| || || || ||  |||||||||||||| ||||||||||||||||||||||| ||||||||||         ||||||||||| |    
T  16722226 tatgcagattctgcttacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttgtacagggactaaaa 16722325  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
      | |||||||||||||||||||||||||||| |||||||||||||    
T  16722326 ctgaaattcgctaatattacagggacgaaaagaggtatttacccta 16722371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 35995821 - 35995676
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatct-aaatcnnnnnnnnacagggactaata 162  Q
    ||||||||||||||| ||||| || || ||||||||||||||| |||||| |||||||||||||||| ||||| |||          ||||||||||| |    
T  35995821 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaaaaaaaaattctacagggactaaaa 35995722  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
     |||||||||||||||||||||| |||||||| |||||||||||||    
T  35995721 ccggaattcgctaatattacaggaacgaaaagaggtatttacccta 35995676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 4204897 - 4204999
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||| |||||| ||||||||||||||||||||| | ||| |||||||||||||||||| |||||||||| ||| |||||| |||||||| |||||| |||    
T  4204897 acagagaccaatagtgggaggaatctgaaattatatggatgtaatttatgcagattctactgacgtgataaaaagagggatcaaaagtggaagaatctga 4204996  T
Q  118 aat 120  Q
    |||    
T  4204997 aat 4204999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 14162106 - 14162248
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||| ||| |||||||||| || ||  |||||||||||||| |||||| |||||||||| ||||| ||||||||||        ||||||||||| |     
T  14162106 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctcttttttacagggactaaaac 14162205  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||    
T  14162206 cggaattcgctaatattacagggacaaaaagaggtattaaccc 14162248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 45003731 - 45003859
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || ||||||||||||||| ||||||||||||||| ||||||  ||||||||||        ||||| ||||| |     
T  45003731 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggactaaatctaaatcttttttttacaggaactaaaac 45003830  T
Q  164 cggaattcgctaatattacagggacgaaa 192  Q
    || ||||||||||||||||||||||||||    
T  45003831 cgaaattcgctaatattacagggacgaaa 45003859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 20853839 - 20853694
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc--nnnnnnnnacagggactaat 161  Q
    |||||||||||| || ||||| || || ||||||||||||||| ||||||||||||||| ||||||| ||||||||||          ||||||  |||     
T  20853839 tatgcagattctacttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggacaaaatctaaatcttttttttttacagggtttaaa 20853740  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    | || |||||||||||||||||||||||||||| ||||||||||||    
T  20853739 accgaaattcgctaatattacagggacgaaaagaggtatttaccct 20853694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 214
Target Start/End: Original strand, 49986763 - 49986914
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaa--tcnnnnnnnnacagggactaat 161  Q
    ||||||||||||||| ||||| || || ||||||||||||||| |||||||||||||||||  |||| ||||||||  ||        ||||| |||||     
T  49986763 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattaca-agacaaaatctaaatttcttttttttacaggaactaaa 49986861  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttaccctattattt 214  Q
    | || |||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  49986862 accgaaattcgctaatattactgggacgaaaagaggtatttaccctactattt 49986914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 14262179 - 14262035
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat-cnnnnnnnnacagggactaata 162  Q
    ||||||||||||||||| ||| || ||  |||||||||||||| |||||| |||||||||||||||| |||||||||          ||| ||||||| |    
T  14262179 tatgcagattctgctgatgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatatttttttttacaaggactaaaa 14262080  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
     ||||||||||||||||||||||||||||||| | |||| |||||    
T  14262079 ccggaattcgctaatattacagggacgaaaagagatattaaccct 14262035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 5800840 - 5800982
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    |||||| ||| |||||| ||| || ||  |||||||||||||| ||||||||||||||||| ||||| ||||||||||         ||||||||||| |    
T  5800840 tatgcaaattttgctgaagtggtggaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaa-a 5800938  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
     ||||||||||||||||||||||||||||||| |||||| ||||    
T  5800939 ccggaattcgctaatattacagggacgaaaagaggtattaaccc 5800982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 21633131 - 21633276
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    |||||||||||| || ||||| || || ||||||||||||||| |||||| |||||||||||||||| ||||||||||         | ||||||||| |    
T  21633131 tatgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaa 21633230  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
      | |||||||||||||||||||||||| ||  |||||||||||||    
T  21633231 ctgaaattcgctaatattacagggacgagaataggtatttacccta 21633276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 38283785 - 38283861
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaat 140  Q
    |||||||||||||||||||||||||||  ||||| |||||||| |||||| |||||||| ||||||| |||||||||    
T  38283785 tatgcagattctgctgacgtgatgaaataagggatcaaaagtggaagaatctgaaattatagggacaaaatctaaat 38283861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 19720432 - 19720333
Alignment:
Q  108 aagaatatgaaattacagggacataatctaaatcnnnnnnnn-acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||||||||||||| ||||||||||         ||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||    
T  19720432 aagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttaccc 19720333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 45970150 - 45970295
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnn--acagggactaat 161  Q
    ||||| ||||||||| ||||| || || | || |||||||||| |||||| |||||||||||||||| ||| ||||||          |||||||||||     
T  45970150 tatgcggattctgcttacgtggtggaatggggaaccaaaagtggaagaatctgaaattacagggacaaaatttaaatcttttttttttacagggactaaa 45970249  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    | || ||||| |||||||||||||||||||||| ||||||||||||    
T  45970250 accgaaattcactaatattacagggacgaaaagaggtatttaccct 45970295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 15328695 - 15328772
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||||||||||||| || ||  |||||||||||||| || ||| |||||||||||||||| ||||||||||    
T  15328695 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatc 15328772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 207
Target Start/End: Original strand, 35741823 - 35741963
Alignment:
Q  67 gcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcgg 166  Q
    |||||||||||||| ||| | ||  ||||||| ||||| | |||||| | |||| ||||||||||||||||||          ||||||||||| |  ||    
T  35741823 gcagattctgctgatgtgttcaattgagggactaaaagcggaagaatctaaaatgacagggacataatctaaactttttttttacagggactaaaactgg 35741922  T
Q  167 aattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  35741923 aattcgctaatattacagggaccaaaagtggtattaaccct 35741963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 27946187 - 27946249
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattat 212  Q
    ||||||||||| | ||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  27946187 acagggactaaaaccggaattcgctaatattactgggacgaaaagaggtatttaccctcttat 27946249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 32998371 - 32998511
Alignment:
Q  66 tgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcg 165  Q
    |||| ||||||||||| || | ||| ||||||| ||||||| | |||| |||||||||||||||| |||||||| |        ||||| ||||| | |     
T  32998371 tgcaaattctgctgacatggttaaacgagggactaaaagtggaggaatctgaaattacagggacagaatctaaa-cttttttttacaggaactaacacca 32998469  T
Q  166 gaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||||||||||||| |||| ||||||| |||||    
T  32998470 gaattcgctaatattacagggaccaaaaatggtattaaccct 32998511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 36990923 - 36991040
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaa 191  Q
    ||||||| ||||||| |||||| | |||||||||||||| ||||||||          ||||||||||| | || |||||||||||||||||||||| ||    
T  36990923 gagggactaaaagtggaagaatctaaaattacagggacagaatctaaactttttttttacagggactaaaaccgaaattcgctaatattacagggaccaa 36991022  T
Q  192 aagtggtatttaccctat 209  Q
    |||| ||||| |||||||    
T  36991023 aagtagtattaaccctat 36991040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 37016363 - 37016480
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaa 191  Q
    ||||||| ||||||| |||||| | |||||||||||||| ||||||||          ||||||||||| | || |||||||||||||||||||||| ||    
T  37016363 gagggactaaaagtggaagaatctaaaattacagggacagaatctaaactttttttttacagggactaaaaccgaaattcgctaatattacagggaccaa 37016462  T
Q  192 aagtggtatttaccctat 209  Q
    |||| ||||| |||||||    
T  37016463 aagtagtattaaccctat 37016480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 52552835 - 52552758
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    |||||||||||||||||| || || ||  ||||| |||||||| |||||| |||||||||||||||| ||||||||||    
T  52552835 tatgcagattctgctgacatggtggaataagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatc 52552758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 35740955 - 35740817
Alignment:
Q  67 gcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcgg 166  Q
    |||||||||||||| ||| |  |  ||||||| ||||||| |||||| | |||||||||||||| |||||||| |        || |||||||| | |||    
T  35740955 gcagattctgctgatgtgttttattgagggactaaaagtggaagaatttaaaattacagggacaaaatctaaa-cttttttttacggggactaaaaccgg 35740857  T
Q  167 aattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    |||||||||||||||||||||| |||||| ||||| ||||    
T  35740856 aattcgctaatattacagggaccaaaagtagtattaaccc 35740817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 27946165 - 27946114
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatt 201  Q
    ||||||||||| | || |||||||||||||||||||||||||||| ||||||    
T  27946165 acagggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatt 27946114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 17465511 - 17465365
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagg-gacataatctaaatcnnnnnnnn-acagggactaat 161  Q
    ||||||||||||||| ||||| || || ||| || ||||| || |||||| |||||||||||| |||  ||||||||||         ||||| |||||     
T  17465511 tatgcagattctgcttacgtggtggaatgagagatcaaaaatggaagaatctgaaattacaggagacgaaatctaaatcattttttttacaggtactaaa 17465412  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||| |||||||||||||||| | |||| ||||| |||||||||||||    
T  17465411 atcagaattcgctaatattaaaaggacaaaaagaggtatttacccta 17465365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 47575415 - 47575339
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    |||||||||||||||| |||| || ||  ||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  47575415 tatgcagattctgctgccgtggtggaat-agggaccaaaagtgaaagaatataaaattacataaacaaaatctaaatc 47575339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 3425973 - 3426029
Alignment:
Q  153 gggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctat 209  Q
    |||||||| | ||||||||||||||||||||||| | ||||| |||||| |||||||    
T  3425973 gggactaaaaccggaattcgctaatattacaggggccaaaagaggtattaaccctat 3426029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 3424830 - 3424773
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||| || | ||||| ||||||||||||||||||| ||||| |||||| |||||    
T  3424830 acagggaccaaaaccggaaatcgctaatattacagggaccaaaagaggtattaaccct 3424773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 52552851 - 52552888
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacagggac 129  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  52552851 gagggaccaaaagtgaaggaatttgaaattacagggac 52552888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 24490242 - 24490298
Alignment:
Q  151 cagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||||| | |||||||| ||||||||||||||| |||||  | ||||||||||    
T  24490242 cagggactaaaaccggaattcactaatattacagggaggaaaaaagatatttaccct 24490298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 5e-53; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 26136002 - 26135829
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||| |||||||    
T  26136002 ggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaatt 26135903  T
Q  122 acagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaag 194  Q
    ||||||||| ||||||||||         ||||||||||| |||||||||||||||||||||||||||||||||    
T  26135902 acagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgctaatattacagggacgaaaag 26135829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 22263380 - 22263572
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||| | ||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  22263380 acagggaccaaaactaggaggaatctgaaattacagggacgtaatttatgcagattatgctgacgtgatgaaaggagggaccaaaagtggaagaatatga 22263479  T
Q  118 aattacagggacataatctaaatc---nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||| ||||| ||||           |||| |||||| | |||||||||||||||||||||| |||||||| ||||||||||||    
T  22263480 aattacagggacaaaatctgaatctttttttttttacagagactaaaaccggaattcgctaatattacaggaacgaaaagaggtatttaccct 22263572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 19251659 - 19251470
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| ||||||| |||||||| |||||||| ||| || ||||||||| | |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  19251659 acagggatcaaaagttggaggaatttgaaattacaagaacataatttatgtatattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatga 19251560  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||| ||||||||||        ||||||||||| | || |||||||||||||||||||||||||||| |||||| |||||    
T  19251559 aattacagggacaaaatctaaatcttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaaagaggtattaaccct 19251470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 42670908 - 42671097
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||| | ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  42670908 acagggaccaaaactaggaggaatctgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatatga 42671007  T
Q  118 aattacagggacataatctaaat-cnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||||||||||||| |        ||||||||||| |  | |||||||||||| ||||||||| ||||| |||||||||||    
T  42671008 aattacagggacataatctaaatccttttttttacagggactaaaactgaaattcgctaatactacagggacaaaaagaggtatttaccc 42671097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 24 - 207
Target Start/End: Original strand, 17850781 - 17850965
Alignment:
Q  24 accaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattac 123  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  17850781 accaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaagagggaccaaaagtggaagaatctgaaattac 17850880  T
Q  124 agggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||| |||||||| |         |||| |||||| | || |||||||||||||||||||||||||||| ||||||||||||    
T  17850881 agggacaaaatctaaagcattttatttacagtgactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccct 17850965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 20498934 - 20498745
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||||||||||||| |||||||| |  ||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||| |||    
T  20498934 acagggaccaaaagtgggaggaatatgaaattatattgacgtaatttatgcagattctactgacgtgataaaaggagggaccaaaagtggaagaatctga 20498835  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    || ||||||||||||||||||||         ||||||||||| | || |||||||||||||||||  ||||||||| |||||||||||||    
T  20498834 aa-tacagggacataatctaaatattttttttacagggactaaaaccgtaattcgctaatattacatagacgaaaagaggtatttacccta 20498745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 26560743 - 26560932
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  26560743 acagggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagagaccaaaagtggaagaatatga 26560842  T
Q  118 aattacagggacataatctaa--atcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacc 205  Q
    ||||| | ||||| |||||||   |         || |||||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  26560843 aattatatggacaaaatctaatttttttttttttaccgggactaaaatcggaattcgctaatattacaaggacgaaaagaggtatttacc 26560932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 26236313 - 26236125
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||||||||||||| |||||| |||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26236313 agggaccaaaagtgg-aggaatatgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatctgaaa 26236215  T
Q  120 ttacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||| ||| ||||||         ||||||||||| | | |||||||||||||||||| |||||||||| | |||||||||||    
T  26236214 ttacagggacaaaatataaatctttttttatacagggactaaaaccagaattcgctaatattacaaggacgaaaagagatatttacccta 26236125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 23854855 - 23854977
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  23854855 acagggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatataa 23854954  T
Q  118 aattacagggacataatctaaat 140  Q
    |||||||| |||| |||||||||    
T  23854955 aattacagagacaaaatctaaat 23854977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 15106256 - 15106067
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||  ||||||||||||||||||||||||||||||| || ||| | |    
T  15106256 acagggaccaaaagtgggaggaatctgaaattacaaggacttaattgatgcagatttagctgacgtgatgaaaggagggaccaaaagtggaataatctaa 15106157  T
Q  118 aattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||| ||||||||||         ||||||| ||| | || |||||||||||||||| ||||||||||| | |||||||||    
T  15106156 aattacagggacaaaatctaaatctttttatttacagggattaaaaccgaaattcgctaatattacggggacgaaaagagatatttaccc 15106067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 17463280 - 17463104
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||||||||||||  ||||  |||    
T  17463280 acagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaatgagggaccaaaagtgggagaacctga 17463181  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaag 194  Q
    ||||||||||||| ||||||| |         |||| |||||| | |||||||||||||||||| ||||||||||||    
T  17463180 aattacagggacaaaatctaatttttttttttacagcgactaaaaccggaattcgctaatattatagggacgaaaag 17463104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 23806139 - 23806022
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | |||    
T  23806139 agggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcggattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctaaaa 23806040  T
Q  120 ttacagggacataatcta 137  Q
    |||||||| || ||||||    
T  23806039 ttacaggggcaaaatcta 23806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 39878289 - 39878102
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||| |||||    
T  39878289 agggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaa 39878190  T
Q  120 ttacagggacataatctaaat-cnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||  |||||||||||||          ||||||||||| | |||||||||||||||||||| |||| ||||  ||||||||||||    
T  39878189 ttacagatacataatctaaatatctttttttacagggactaaaaccggaattcgctaatattacaaggac-aaaaaaggtatttaccct 39878102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 19251705 - 19251849
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| ||||||||||||||||| ||||| ||||||||||        ||||||||||| |     
T  19251705 tatgcagattctgctgacgtggtgaaatgagggaccgaaagtggaagaatatgaaattacaaggacagaatctaaatcttttttttacagggactaaaac 19251804  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||    
T  19251805 cggaattcactaatattacaaggacgaaaagaggtatttacccta 19251849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 33290238 - 33290062
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| | |||  |||||||||||||| | || |||||    
T  33290238 acagggaccaaaagggggaggaatctgaaattacagggacgaaatttatgcagattctgctgacgtggttaaataagggaccaaaagtggaggagtatga 33290139  T
Q  118 aattacagggacataatctaaa-tcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaa 193  Q
    ||||||| ||||| |||||||| |         ||||||||||| |  |||||||||||||||||||||||| ||||    
T  33290138 aattacaaggacagaatctaaattttttattttacagggactaaaactggaattcgctaatattacagggaccaaaa 33290062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 13284597 - 13284716
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||| | ||| ||||||||||||||| | |||| |||    
T  13284597 acagggaccaaaagtgggaggaatcttaaattacaaggacgtaatttatgtagattctgttgacgtggttaaatgagggaccaaaagtggaggaatctga 13284696  T
Q  118 aattacagggacataatcta 137  Q
    ||||||| ||||| ||||||    
T  13284697 aattacaaggacaaaatcta 13284716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 17850729 - 17850587
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| || || |||||| |||||||| |||||| | ||||||||| |||| ||||||||||        | ||||||||| ||    
T  17850729 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatcttaaattacagagacaaaatctaaatcttttttttatagggactaaaat 17850630  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  17850629 cggaattcgctaatattacagggacgaaaagaggtatttaccc 17850587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 23806187 - 23806330
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    |||||| ||| |||||||||| || || ||||||||||||||| ||||||||||||||||||||||| ||||||||||         ||||||||||| |    
T  23806187 tatgcaaattttgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 23806286  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
     || |||||||||||||||||||||| ||||| |||||||||||    
T  23806287 ccgaaattcgctaatattacagggacaaaaagaggtatttaccc 23806330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 26236330 - 26236473
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || |||||||||||| || |||||| |||||||||||||||| ||||||||||         || ||||||| |     
T  26236330 tatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttccaaggactaaaac 26236429  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    || |||||||||||||||||||||||||||| ||||||||||||    
T  26236430 cgaaattcgctaatattacagggacgaaaagaggtatttaccct 26236473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 15106302 - 15106443
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||||||| |||||||||| || || |||||| |||||||| |||||| |||||||||||||||| |||||||||         ||||||||||| ||    
T  15106302 tatgcagattttgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat-ttttttttacagggactaaaat 15106400  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    || |||||||||||||||| ||||||||||| |||||||||||    
T  15106401 cgaaattcgctaatattacggggacgaaaagaggtatttaccc 15106443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 17463326 - 17463470
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||| || || || || |||||| |||||||| ||||||||| ||||||||||||| ||||||||||         ||||||||||| |    
T  17463326 tatgcagattctgcttacatggtggaatgagggatcaaaagtggaagaatatgcaattacagggacaaaatctaaatctttttttttacagggactaaaa 17463425  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
     ||||||||||||||||||||||| ||||||| ||||||||||||    
T  17463426 ccggaattcgctaatattacaggggcgaaaagaggtatttaccct 17463470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 26560697 - 26560554
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| || ||  |||||||||||||| |||||| |||||||||||||||  ||||||||||        ||||||||||| ||    
T  26560697 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggactaaatctaaatc-tttttttacagggactaaaat 26560599  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    || |||||| ||||||||||||||||||||| | |||| ||||||    
T  26560598 cgaaattcgttaatattacagggacgaaaagagatattaacccta 26560554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 34548712 - 34548574
Alignment:
Q  68 cagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcgga 167  Q
    |||||||| |||||||||||||||||| ||||||| ||| || |||||||||||||| ||||| ||||||||||        ||||||||||| | |  |    
T  34548712 cagattctactgacgtgatgaaaggagtgaccaaaggtggaacaatatgaaattacatggacaaaatctaaatcttttttttacagggactaaaaccaaa 34548613  T
Q  168 attcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    |||| ||||||||||||||||||||||  ||||||||||    
T  34548612 attcactaatattacagggacgaaaagaagtatttaccc 34548574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 22263334 - 22263204
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||||||||| || ||  |||||||||||||| ||||||||||||||||||||||| ||||||||||        | || |||||| |     
T  22263334 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttcatagagactaaaac 22263235  T
Q  164 cggaattcgctaatattacagggacgaaaag 194  Q
    | |||||| ||||||||||||||| ||||||    
T  22263234 cagaattctctaatattacagggatgaaaag 22263204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 20498980 - 20499057
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    ||||||||||||||||| ||| ||||| || ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  20498980 tatgcagattctgctgatgtggtgaaatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatc 20499057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 208
Target Start/End: Complemental strand, 13254626 - 13254495
Alignment:
Q  78 tgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaa 176  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||||         ||||||| ||| | |  ||||||||||    
T  13254626 tgacgtgatgaaaggaggaaccaaaagtgaaagaatctgaaattacaaggacaaaatctaaatcttttattttacagggagtaaaaccaaaattcgctaa 13254527  T
Q  177 tattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||| ||| |||| |||||||||||||    
T  13254526 tattacaggaacggaaagaggtatttacccta 13254495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 30390602 - 30390471
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaa-atcnnnnnnnnacagggactaata 162  Q
    |||||||||| |||| ||||| || || ||||||||||||||| ||||||||||||||||||||||| |||||||  |         ||||||| ||| |    
T  30390602 tatgcagattttgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaattttttttttttacagggattaaaa 30390503  T
Q  163 tcggaattcgctaatattacagggacgaaaag 194  Q
    ||||||||||||||||||||| ||||||||||    
T  30390502 tcggaattcgctaatattacatggacgaaaag 30390471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 23854797 - 23854688
Alignment:
Q  98 ccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnn-acagggactaatatcggaattcgctaatattacagggacgaaaagtg 196  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||         ||||||||||| | || |||||||||||||||||||||||||||| |    
T  23854797 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaaagag 23854698  T
Q  197 gtatttaccc 206  Q
    ||||| ||||    
T  23854697 gtattaaccc 23854688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 30959909 - 30960050
Alignment:
Q  66 tgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcg 165  Q
    ||||||||||||| ||  | | ||| ||||||  ||||||| | ||||||||||||||||||||||||||||||          ||| ||||||| | ||    
T  30959909 tgcagattctgctaacagggttaaacgagggattaaaagtggaggaatatgaaattacagggacataatctaaactttttttttacatggactaaaaccg 30960008  T
Q  166 gaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  30960009 gaattcgctaatattacagggaccaaaagtggtattaaccct 30960050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 39878337 - 39878402
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggac 129  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||| ||| |||||||||||||||    
T  39878337 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtgaaaaaatctgaaattacagggac 39878402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 13284551 - 13284485
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggaca 130  Q
    ||||||||||||| || |||| ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  13284551 tatgcagattctgttgtcgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggaca 13284485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 12418960 - 12419101
Alignment:
Q  66 tgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcg 165  Q
    |||||||||||||||| || | ||| ||||||| ||||||| | ||||  |||||| || ||||| ||||||||          | ||||||||| | ||    
T  12418960 tgcagattctgctgacatggttaaatgagggactaaaagtggaggaatcggaaatttcatggacagaatctaaactttttttttatagggactaaaaccg 12419059  T
Q  166 gaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  12419060 gaattcgctaatattacagggaccaaaagtggtattaaccct 12419101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 12431020 - 12431161
Alignment:
Q  66 tgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatatcg 165  Q
    |||||||||||||||| || | ||| ||||||| ||||||| | ||||  |||||| || ||||| ||||||||          | ||||||||| | ||    
T  12431020 tgcagattctgctgacatggttaaatgagggactaaaagtggaggaatcggaaatttcatggacagaatctaaactttttttttatagggactaaaaccg 12431119  T
Q  166 gaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  12431120 gaattcgctaatattacagggaccaaaagtggtattaaccct 12431161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 26136052 - 26136195
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnn--acagggactaat 161  Q
    ||||||||||||||| |||||||| || ||| || |||||||| |||||||||||||||||  |||| ||||||||||          ||||| |||||     
T  26136052 tatgcagattctgcttacgtgatggaacgagagatcaaaagtggaagaatatgaaattacaatgacaaaatctaaatcttttttttttacagg-actaaa 26136150  T
Q  162 atcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    | || |||||| |||||||||| |||||||||| |||||||||||    
T  26136151 accgaaattcgttaatattacaaggacgaaaagaggtatttaccc 26136195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 206
Target Start/End: Complemental strand, 42670851 - 42670717
Alignment:
Q  75 tgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnn---acagggactaatatcggaattc 171  Q
    |||||||||| || ||  |||||||||||||| ||||||||||||||||| ||||| ||||||| |            ||||||||||| | ||||||||    
T  42670851 tgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaattttttttttttttacagggactaaaaccggaattc 42670752  T
Q  172 gctaatattacagggacgaaaagtggtatttaccc 206  Q
    |||| |||||||||||||||||| |||||| ||||    
T  42670751 gctactattacagggacgaaaagaggtattaaccc 42670717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 33290284 - 33290426
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||||||||| |  ||||||| |||||  |||||||||||||| ||||||||||||||||| || || ||||| |||         ||||||| ||| |     
T  33290284 tatgcagatttttttgacgtggtgaaattagggaccaaaagtggaagaatatgaaattacaaggtcaaaatct-aattttttttttacagggattaaaac 33290382  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    | ||||||||||||||||||||||| ||||| |||||| |||||    
T  33290383 cagaattcgctaatattacagggaccaaaagcggtattaaccct 33290426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 23855030 - 23855072
Alignment:
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  23855030 cggaattcgctaatattacagggacgaaaagaggtatttaccc 23855072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 30958740 - 30958684
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
    ||||||||||| | || |||||||||||||||||||||| |||||||||||| ||||    
T  30958740 acagggactaaaaccgaaattcgctaatattacagggaccaaaagtggtattaaccc 30958684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 13254758 - 13254811
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaagtggtattta 203  Q
    |||| |||||| | ||||||||||||||||||||||||||||||| | ||||||    
T  13254758 acagagactaaaaccggaattcgctaatattacagggacgaaaagagatattta 13254811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 23047918 - 23047963
Alignment:
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccctat 209  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||    
T  23047918 cggaattcgctcatattacagggacgaaaataggtatttaccctat 23047963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 13254677 - 13254733
Alignment:
Q  70 gattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagg 126  Q
    ||||||||| | ||| ||||| ||||||||||||||| |||||| ||||||||||||    
T  13254677 gattctgcttatgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagg 13254733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 13284454 - 13284410
Alignment:
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||    
T  13284454 cggaattcgctgatattacagggacaaaaagtggtattaacccta 13284410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 23046749 - 23046705
Alignment:
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||    
T  23046749 cggaattcgctcatattacaaggacgaaaagaggtatttacccta 23046705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 13284561 - 13284604
Alignment:
Q  86 tgaaaggagggaccaaaagtgaaagaatatgaaattacagggac 129  Q
    ||||| |||||||||||||||||  |||||||||||||||||||    
T  13284561 tgaaatgagggaccaaaagtgaagaaatatgaaattacagggac 13284604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 44098894 - 44099013
Alignment:
Q  101 aaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnn-acagggactaatatcggaattcgctaatattacagggacgaaaagtggta 199  Q
    |||||| |||||| ||||||||||||||||||||||||||          ||||| || || | | ||||||||| ||||||||||||||||||| | ||    
T  44098894 aaagtggaagaatctgaaattacagggacataatctaaattattttttttacaggaaccaaaaccagaattcgctcatattacagggacgaaaagagata 44098993  T
Q  200 tttaccctattatttatata 219  Q
    ||||||| || || ||||||    
T  44098994 tttacccaatcatatatata 44099013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 26236314 - 26236272
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacagggacataat 134  Q
    ||||||||||||||| | |||||||||||||||||||| ||||    
T  26236314 gagggaccaaaagtggaggaatatgaaattacagggacgtaat 26236272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Original strand, 30390618 - 30390660
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacagggacataat 134  Q
    |||||||||||| |||| |||| ||||||||||||||||||||    
T  30390618 gagggaccaaaaatgaaggaatctgaaattacagggacataat 30390660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 13284735 - 13284779
Alignment:
Q  150 acagggactaatatcggaattcgctaatattacagggacgaaaag 194  Q
    ||||||||||| | || |||||||||||||||||||||| |||||    
T  13284735 acagggactaaaaccgaaattcgctaatattacagggaccaaaag 13284779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 4752 - 4561
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||| |||| ||||||||||||||||||  |||||| | |    
T  4752 acagggaccaaaagtgggaggaatctgaaattacacggacgtaatttatgcagattctgttgacttgataaaaggagggaccaaaagtagaagaatctca 4653  T
Q  118 aattacagggacataatctaaatc--nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||||| ||| ||||||          ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||    
T  4652 aattacagggacaaaatttaaatcttttttttttacagggactaaaatcggaattcgctaatattacaaggacgaaaagaggtatttaccct 4561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 4798 - 4942
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    ||||||||||||||| ||||| || || ||||||||||||||| ||||||||||||||||| ||||| ||||||||||        ||||||| ||| |     
T  4798 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttatttttacagggattaaaac 4897  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  4898 cggaatttgctaatattacagggacgaaaagaggtatttacccta 4942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 7390 - 7579
Alignment:
Q  20 agggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaa 119  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| || |||| |||||||||||  ||||||||||  |||||| |||||    
T  7390 agggaccaaaagtggtaggaatctgaaattacaaggatgtaatttatgcagattttgttgacttgatgaaaggatagaccaaaagtagaagaatctgaaa 7489  T
Q  120 ttacagggacataatctaaatc--nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    ||||||||||| ||||||||||          ||||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||    
T  7490 ttacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaataggtatttaccct 7579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 7341 - 7227
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacga 190  Q
    |||||||| |||||| ||||||||||||||||||||||| ||||||||||         ||||| ||||| | | |||||||||||||||||| ||||||    
T  7341 gagggaccgaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaacaccagaattcgctaatattacaaggacga 7242  T
Q  191 aaagtggtatttacc 205  Q
    |||| ||||||||||    
T  7241 aaagaggtatttacc 7227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 8508 - 8323
Alignment:
Q  22 ggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 121  Q
    ||||||||||||||||||||||||||||| | |||||||||| ||||||||| || ||||||||||||||||| |||||||||||||||||| ||  |||    
T  8508 ggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcagattttgttgacgtgatgaaaggagagaccaaaagtgaaagaatctg--att 8411  T
Q  122 acagggacataatctaaatc-nnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    || |||||| ||||||||||         || |||||||| | || |||||||||||||||||||||||||||| |||||||||||||    
T  8410 actgggacaaaatctaaatctttttatttacggggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttacccta 8323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 8557 - 8700
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    ||||||||||||||||||||| || || ||||||||||||||| |||||| | |||||||||||||| ||||||||||         | ||||||||| |    
T  8557 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttaaagggactaaaa 8656  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatttaccc 206  Q
     ||||||||||||||||| |||| || |||||  ||||||||||    
T  8657 ccggaattcgctaatattgcaggaacaaaaagcagtatttaccc 8700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 15822 - 16008
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||| |||||||||||||||||||||||||||| |  |   |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15822 acagagaccaaaagtgggaggaatctgaaattacagcgta-taatttatgcagattctgctgacgtgatgaaaggagagaccaaaagtgaaagaatatga 15920  T
Q  118 aattacagggacataatctaaatcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||| |||||   |         |||| |||||| | |||||||||||||||||||| |||||||||| | |||||||||||    
T  15921 aattacagggacaaaatct---ttttttttttacagagactaaaaccggaattcgctaatattacatggacgaaaagagatatttacccta 16008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 4058 - 4180
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||| |||||||||||||||||||||||||||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  4058 acagtgaccaaaagtgggaggaatctgaaattacagagacataatttatgcagattctgctgacgtgatgaaaggagggaccaaaaatgaaagaatctga 4157  T
Q  118 aattacagggacataatctaaat 140  Q
    |||||||   |||||||||||||    
T  4158 aattacaacaacataatctaaat 4180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 66 - 208
Target Start/End: Complemental strand, 4010 - 3867
Alignment:
Q  66 tgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaatatc 164  Q
    |||||||||||||||| || ||||| ||| |||||| |||| |||||| |||||||||||||||||||||||||||         ||||||||||| | |    
T  4010 tgcagattctgctgacatggtgaaatgagcgaccaacagtggaagaatttgaaattacagggacataatctaaatctttttttttacagggactaaaacc 3911  T
Q  165 ggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  3910 ggaattcgctaatattacagggacgaaaagagatatttacccta 3867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 12217 - 12355
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc-nnnnnnnnacagggactaata 162  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| ||||||||||         | ||||||||| |    
T  12217 tatgcagattctgctgacgtgatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaa 12316  T
Q  163 tcggaattcgctaatattacagggacgaaaagtggtatt 201  Q
     ||||||||||||||||||||||||||||||| ||||||    
T  12317 ccggaattcgctaatattacagggacgaaaagaggtatt 12355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 409 - 513
Alignment:
Q  18 acagggaccaaaagtgggaggaatctgaaattagaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatga 117  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||  |||||||||| || ||| |||    
T  409 acagggaccaaaatcgggaggaatctgaaattacaag-acgtaatttatgcagattctgctgatgtgattaaaggagataccaaaagtggaataatctga 507  T
Q  118 aattac 123  Q
    ||||||    
T  508 aattac 513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 363 - 286
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatc 141  Q
    |||||| |||||||| | ||| || || ||||||||||||||| |||||| ||||||||  |||| | ||||||||||    
T  363 tatgcaaattctgcttatgtggtggaatgagggaccaaaagtggaagaatctgaaattatggggagaaaatctaaatc 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 5941 - 6060
Alignment:
Q  92 gagggaccaaaagtgaaagaatatgaaattacagggacataatctaaa--tcnnnnnnnnacagggactaatatcggaattcgctaatattacagggacg 189  Q
    |||||| |||||||| | |||| |||||||||||||||| ||||||||  |         ||||||||||| ||||||||||||||||||| |||||||     
T  5941 gagggatcaaaagtggaggaatctgaaattacagggacagaatctaaactttttttttttacagggactaaaatcggaattcgctaatattgcagggacc 6040  T
Q  190 aaaagtggtatttaccctat 209  Q
    ||||| ||||||||||||||    
T  6041 aaaagaggtatttaccctat 6060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 4807 - 4665
Alignment:
Q  67 gcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaa-tcnnnnnnnnacagggactaatatcg 165  Q
    |||||||||||||||  ||| ||   |||||||||||||| | |||| |||||||||||||||| |||||||| |         | ||||||||| |  |    
T  4807 gcagattctgctgacaagatcaagcaagggaccaaaagtggaggaatctgaaattacagggacagaatctaaacttttttttttatagggactaaaactg 4708  T
Q  166 gaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||    
T  4707 gaattcgctaatattgcagggactaaaagaggtatttacccta 4665  T

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Target: scaffold0477 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 4983 - 5125
Alignment:
Q  64 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacataatctaaatcnnnnnnnnacagggactaatat 163  Q
    |||| |||||||||| ||||| || || ||||||||||||||| |||||| | |||||||||||||  |||||||||         ||  |||| || |     
T  4983 tatgtagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatattttttttactaggacaaaaac 5082  T
Q  164 cggaattcgctaatattacagggacgaaaagtggtatttaccct 207  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  5083 cggaattcgctaatattacatggacgaaaag-ggtatttaccct 5125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 4932 - 4878
Alignment:
Q  154 ggactaatatcggaattcgctaatattacagggacgaaaagtggtatttacccta 208  Q
    ||||||| | || ||||||||||||||||||| || ||||| |||||||||||||    
T  4932 ggactaaaaccgaaattcgctaatattacaggaacaaaaagaggtatttacccta 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 226 - 293
Alignment:
Q  152 agggactaatatcggaattcgctaatattacagggacgaaaagtggtatttaccctattatttatata 219  Q
    ||||||||| |  ||||||||||||||||| |||||| |||||||||||  |||||  ||||||||||    
T  226 agggactaaaactggaattcgctaatattatagggactaaaagtggtatgaacccttctatttatata 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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