View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1627_low_38 (Length: 324)
Name: NF1627_low_38
Description: NF1627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1627_low_38 |
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Alignment Details
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 7 - 310
Target Start/End: Original strand, 7266023 - 7266326
Alignment:
| Q |
7 |
aaaagtataatgaagagaaatttttcagctccttgacatatgcatgcaaaagaatccaaagcaaatttaacaaatgcaaagcaatatatactacaaaata |
106 |
Q |
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| T |
7266023 |
aaaagtacaatgaagagaaatttttcagctccttgacatatgcatgcaaaagaatccaaagcaaatttaacaaatggaaagcaatatatactacaaaata |
7266122 |
T |
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| Q |
107 |
gctcaacaaaaagatacatgattttatatactaagaataagaattaattccttatgaaatgaatctannnnnnnctatcaaaagttgttggcaaattaag |
206 |
Q |
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| T |
7266123 |
gctcaacaaaaagatacatgattttatatactaagaataagaattaattccttatgaaatgaatctatttttttctatcaaaagttgttggcaaattaag |
7266222 |
T |
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| Q |
207 |
aaagtgtattcaggaagacttagatacatgattatgatattattttatattttacttgcggtcacaattcttgagattatatcgaagtacgatcaaatgt |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
7266223 |
aaagtgtattcaggaagacttagatacatgattatgatattattttatgttttacttgcggtcacaattcttgatattatatcgaagtacgatcaaatgt |
7266322 |
T |
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| Q |
307 |
gtcc |
310 |
Q |
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|||| |
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| T |
7266323 |
gtcc |
7266326 |
T |
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