View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16281_high_37 (Length: 249)
Name: NF16281_high_37
Description: NF16281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16281_high_37 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 40593165 - 40593386
Alignment:
| Q |
14 |
gagaagaagatatatatgcaataagttgtaagttacttttgttctgcacaagctaatgaggtcggtgtagtaccatgaacatgtatattttcactattaa |
113 |
Q |
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| T |
40593165 |
gagaagaagatatatatgcaataagttgtaagttacttttgttctgcacaagctaatgaggtcggtgtagtaccacgaacatgtatattttcactattaa |
40593264 |
T |
|
| Q |
114 |
atcaataagttccagggttggatcaaggaagatataatgatagaaaataagcactatcttatttatccacaatagacttaacctaaacaatgtgtaataa |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
40593265 |
atcaataagttccagggttggatcaaggaagatataatgatagaaaataagcactatcttatttatccacagtagacttaacctaaacaatgtgtaataa |
40593364 |
T |
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| Q |
214 |
ttaactaaacgtgtaataattg |
235 |
Q |
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|||||||||||||||||||||| |
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| T |
40593365 |
ttaactaaacgtgtaataattg |
40593386 |
T |
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