View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16281_low_13 (Length: 411)
Name: NF16281_low_13
Description: NF16281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16281_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 36464768 - 36465119
Alignment:
| Q |
1 |
tttaggttcgcttagctaattctgttgattttaagattgttgataaggaagcacaagtagataggttcctctcaagagaatatggtcattttcattgggt |
100 |
Q |
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| T |
36464768 |
tttaggttcgcttagctaattctgttgattttaagattgttgataaggaagcacaagtagataggttcctctcaagagaatatggtcattttcattgggt |
36464867 |
T |
|
| Q |
101 |
atttgattgtgtgaatgaatgattaatttttccaacaaaagcttatatggtgggaagggaaggtaacttctaattctcttgtgttagtgaacttccttat |
200 |
Q |
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| T |
36464868 |
atttgattgtgtgaatgaatgattaatttttccaacaaaagcttatatggtgggaagggaaggtaacttctaattctcttgtgttagtgaacttccttat |
36464967 |
T |
|
| Q |
201 |
ctatgttgaaatcgctataacccttatctatgtagacattgtaagtaatgatttacgtcggatttgcatcataaaaatctgctttaaaatcaatatgtat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36464968 |
ctatgttgaaatcgctataacccttatctatgtagacattgtaagtaatgatttacgtcggatttgcatcataaaaatctgctttaaaatcaatatgtat |
36465067 |
T |
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| Q |
301 |
tagtattatagtcttgtacaaggcaatcatgtagctagtaatatactataaa |
352 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36465068 |
tagtattatagtcttgtacaaggcaatcatgtagctagtaatatactataaa |
36465119 |
T |
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