View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16281_low_44 (Length: 244)
Name: NF16281_low_44
Description: NF16281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16281_low_44 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 44977080 - 44976853
Alignment:
| Q |
1 |
tattttaatagattctgaattttcaattattggtttagtcacatgcactgtattatgtatttacacataattaagtggatcctctgttt-ctcttctacg |
99 |
Q |
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| T |
44977080 |
tattttaatagattctgaattttcaattattggtttagtcacatgcactgtattatgtatttacacataattaagtggatcctctgttttctcttctacg |
44976981 |
T |
|
| Q |
100 |
ttcccattttcatccctaaataagtctcccataaacttatcatttattacacaagagaaatttggaaaagtcgtttagtgttagcaatgatcctggttct |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44976980 |
ttcccattttcatccctaaataagtctcccataaacttatcatttattacacaagagaaatttggaaaagtcgtttagtgttagcaatgatcctggttct |
44976881 |
T |
|
| Q |
200 |
ctataatggtctcacattgtctaatgtt |
227 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
44976880 |
ctataatggtctcacattgtctaatgtt |
44976853 |
T |
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