View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16281_low_7 (Length: 462)

Name: NF16281_low_7
Description: NF16281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16281_low_7
NF16281_low_7
[»] chr7 (17 HSPs)
chr7 (1-437)||(36463846-36464282)
chr7 (1-71)||(3935069-3935139)
chr7 (1-70)||(3932830-3932899)
chr7 (1-72)||(8731174-8731245)
chr7 (1-71)||(8414489-8414559)
chr7 (1-70)||(16496953-16497022)
chr7 (1-70)||(18395428-18395497)
chr7 (1-70)||(42678571-42678640)
chr7 (1-70)||(19789202-19789272)
chr7 (1-70)||(16535135-16535204)
chr7 (1-70)||(16630458-16630527)
chr7 (1-68)||(19786896-19786964)
chr7 (7-70)||(8733495-8733558)
chr7 (9-73)||(21769066-21769130)
chr7 (16-70)||(42680808-42680862)
chr7 (9-68)||(19093846-19093903)
chr7 (9-70)||(3052328-3052387)
[»] chr5 (9 HSPs)
chr5 (1-71)||(11849916-11849986)
chr5 (1-70)||(11852175-11852244)
chr5 (1-70)||(23164254-23164323)
chr5 (7-71)||(22601024-22601088)
chr5 (7-70)||(37215575-37215638)
chr5 (9-70)||(21743736-21743797)
chr5 (7-70)||(37208007-37208070)
chr5 (9-70)||(15469197-15469258)
chr5 (1-70)||(1779222-1779286)
[»] chr4 (9 HSPs)
chr4 (1-71)||(42468438-42468508)
chr4 (1-70)||(13774267-13774336)
chr4 (1-70)||(42470768-42470837)
chr4 (1-70)||(45162295-45162364)
chr4 (1-70)||(50855771-50855840)
chr4 (1-67)||(13776563-13776630)
chr4 (6-70)||(19429076-19429140)
chr4 (1-68)||(45167187-45167254)
chr4 (9-70)||(8739501-8739562)
[»] chr3 (2 HSPs)
chr3 (1-71)||(4533248-4533318)
chr3 (1-70)||(4530951-4531020)
[»] chr2 (10 HSPs)
chr2 (1-70)||(5164151-5164220)
chr2 (1-70)||(42275556-42275625)
chr2 (1-70)||(42277782-42277851)
chr2 (1-70)||(31486999-31487069)
chr2 (1-72)||(31489283-31489355)
chr2 (1-64)||(8995076-8995139)
chr2 (1-64)||(15730030-15730093)
chr2 (8-70)||(39816089-39816151)
chr2 (9-71)||(23860126-23860188)
chr2 (9-62)||(34576612-34576665)
[»] chr1 (9 HSPs)
chr1 (1-70)||(29833977-29834046)
chr1 (1-71)||(10911466-10911536)
chr1 (1-70)||(13011812-13011881)
chr1 (1-70)||(29833076-29833145)
chr1 (1-70)||(10909222-10909292)
chr1 (1-70)||(8933549-8933618)
chr1 (8-70)||(2403835-2403897)
chr1 (1-70)||(734579-734646)
chr1 (8-70)||(2409957-2410019)
[»] chr8 (6 HSPs)
chr8 (1-72)||(24519151-24519222)
chr8 (1-70)||(4877107-4877176)
chr8 (1-70)||(4879435-4879504)
chr8 (1-70)||(36379465-36379535)
chr8 (1-70)||(21268120-21268190)
chr8 (1-71)||(36377180-36377250)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-70)||(1732-1801)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-70)||(88462-88531)
[»] scaffold1361 (1 HSPs)
scaffold1361 (1-70)||(70-140)
[»] scaffold0098 (1 HSPs)
scaffold0098 (9-70)||(3707-3768)
[»] scaffold0050 (2 HSPs)
scaffold0050 (9-70)||(29453-29514)
scaffold0050 (9-70)||(31768-31829)
[»] chr6 (1 HSPs)
chr6 (9-68)||(20642300-20642359)
[»] scaffold0045 (2 HSPs)
scaffold0045 (9-73)||(64082-64144)
scaffold0045 (9-73)||(71414-71476)


Alignment Details
Target: chr7 (Bit Score: 400; Significance: 0; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 1 - 437
Target Start/End: Complemental strand, 36464282 - 36463846
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaatgattcctcgaaaaatgctttgtgctac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36464282 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaacgattcctcgaaaaatgctttgtgctac 36464183  T
Q  101 attaggatgatacttgnnnnnnnggaatccaaaccagacacacagaacgtgtatacgatgttttatgacttggattcgcatgatttacttccatacttcc 200  Q
    ||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464182 attaggatgatacttgtttttttggaatccaaaccagacacacagaacgtgtatacgatgttttatgacttggattcgcatgatttacttccatacttcc 36464083  T
Q  201 atagcttaataatgaattttattttggtaagtgactacgattccattggagtttttgattggttatcttgtgaacataaacacaacctcaaacataagga 300  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464082 atagcttaataatgaattttattttggaaggtgactacgattccattggagtttttgattggttatcttgtgaacataaacacaacctcaaacataagga 36463983  T
Q  301 tcataggtttctttccctgtctctaaactcctttaacatagacatgatgacttcataaacaagttgttccaagcttggaatcatgttaatagtgacttca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36463982 tcataggtttctttccctgtctctaaactcctttaacatagacatgatgacttcataaacaagtttttccaagcttggaatcatgttaatagtgacttca 36463883  T
Q  401 agttctcccacaattttacgagctcttatgtaaagtc 437  Q
    |||||||||||||||||||||||||||||||||||||    
T  36463882 agttctcccacaattttacgagctcttatgtaaagtc 36463846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3935069 - 3935139
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 71  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3935069 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaa 3935139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3932830 - 3932899
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3932830 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 3932899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8731245 - 8731174
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaa 72  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  8731245 atataacttttctttgagaatattagagtgtttctctattttatctacctttccttttgtccctgagccaaa 8731174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8414559 - 8414489
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 71  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  8414559 atataacttttctttgagaatattagagtgtttttctattttctctacctttccttttgtccctgagccaa 8414489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16497022 - 16496953
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  16497022 atataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccctgagcca 16496953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18395428 - 18395497
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  18395428 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctaagcca 18395497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42678640 - 42678571
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  42678640 atataacttttctttgagaatattagagtgtttctttattttctctacctttccttttgtccctgagcca 42678571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19789202 - 19789272
Alignment:
Q  1 atataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19789202 atataacttttcctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 19789272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16535204 - 16535135
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  16535204 atataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccccgagcca 16535135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16630458 - 16630527
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  16630458 atataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccccgagcca 16630527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19786896 - 19786964
Alignment:
Q  1 atataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagc 68  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19786896 atataacttttcctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagc 19786964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 8733558 - 8733495
Alignment:
Q  7 cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||  |||||||||||||||||    
T  8733558 cttttctttgagaatattagagagtttctctattttctctaccttctcttttgtccctgagcca 8733495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 21769130 - 21769066
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaat 73  Q
    ||||||||||||||||| || ||||||| ||||||||||||||||||||  ||||||||| ||||    
T  21769130 tttctttgagaatattaaagagtttctctattttctctacctttcctttcatccctgagcaaaat 21769066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 42680808 - 42680862
Alignment:
Q  16 gagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||    
T  42680808 gagaatattagagtgtttctctattttctctacctttcattttgttcctcagcca 42680862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 19093903 - 19093846
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagc 68  Q
    |||||||||||||||||||| ||||||  ||||||||||||| |||||||| ||||||||    
T  19093903 tttctttgagaatattagagagtttct--attttctctacctctccttttgaccctgagc 19093846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 3052328 - 3052387
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||| ||||||  ||||  |||||||||||| |||||||||||||| |||||    
T  3052328 tttctttgagaataatagagt--ttctttattttctctaccattccttttgtccctcagcca 3052387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11849986 - 11849916
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 71  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11849986 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaa 11849916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11852244 - 11852175
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11852244 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 11852175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23164323 - 23164254
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  23164323 atataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccctgagcca 23164254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 22601024 - 22601088
Alignment:
Q  7 cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 71  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  22601024 cttttctttgagaatattagagagtttctctattttctctaccttcccttttgtccctgagccaa 22601088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 37215575 - 37215638
Alignment:
Q  7 cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  37215575 cttttctttgagaatattagagagtttctctattttctctaccttcccttttgtccctgagcca 37215638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 21743736 - 21743797
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  21743736 tttctttgagaatattagagagtttctctattttctctacctttccttttgtccctgggcca 21743797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 37208007 - 37208070
Alignment:
Q  7 cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  37208007 cttttcttcgagaatattagagagtttctctattttctctaccttcccttttgtccctgagcca 37208070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 15469197 - 15469258
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||    
T  15469197 tttctttgagaatattagagagtttctctattttttttacctttccttttgtccctgagcca 15469258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1779286 - 1779222
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||| ||| |||||||     |||||||||||||||||||||    
T  1779286 atataacttttctttgagaatattagagtgttcctctattttct-----tttccttttgtccctgagcca 1779222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42468508 - 42468438
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 71  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42468508 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaa 42468438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13774267 - 13774336
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13774267 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 13774336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42470837 - 42470768
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42470837 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 42470768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 45162295 - 45162364
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45162295 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 45162364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50855840 - 50855771
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50855840 atataacttttcctcgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 50855771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13776563 - 13776630
Alignment:
Q  1 atataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgag 67  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13776563 atataacttttcgtttgagaatattagagtgtttctctattttctctacctttccttttgtccctgag 13776630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 19429140 - 19429076
Alignment:
Q  6 acttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  19429140 acttttctttgagaatattagagagtttctctattttctctacctttccttttgtccgtgagcca 19429076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 45167187 - 45167254
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagc 68  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||  || |||||||||||||| |||||    
T  45167187 atataacttttttttaagaatattagagtgtttctctattttcggtaactttccttttgtccatgagc 45167254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 8739501 - 8739562
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||| ||||||| ||||||| ||||||  |||||||||  |||||||||| |||||||||||    
T  8739501 tttccttgagaacattagagagtttctttattttctctttctttccttttatccctgagcca 8739562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4533248 - 4533318
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 71  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4533248 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaa 4533318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4530951 - 4531020
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4530951 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 4531020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5164220 - 5164151
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5164220 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 5164151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42275625 - 42275556
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42275625 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 42275556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42277851 - 42277782
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42277851 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 42277782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31486999 - 31487069
Alignment:
Q  1 atataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31486999 atataacttttcctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 31487069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 31489283 - 31489355
Alignment:
Q  1 atataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaa 72  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  31489283 atataacttttcctttgagaatattagagtgtttctctattttctctacctttccttttgtccctaagccaaa 31489355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8995139 - 8995076
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccct 64  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  8995139 atataacttttctttgagaatattagagagtttctctattttctctacctttccttttgtccct 8995076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15730030 - 15730093
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccct 64  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  15730030 atataacttttatttgagaatattagagagtttctctattttctctacctttccttttgtccct 15730093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 39816151 - 39816089
Alignment:
Q  8 ttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  39816151 ttttctttgagaatattagagagtttctctattttctctacctttccttttgtccgtgagcca 39816089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 23860126 - 23860188
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 71  Q
    |||||||||||||||||||| ||||||| ||||||| | | ||||||||||||||||||||||    
T  23860126 tttctttgagaatattagagagtttctctattttctatgcttttccttttgtccctgagccaa 23860188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 34576665 - 34576612
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtcc 62  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  34576665 tttctttgagaatattagagagtttctctattttctctaccttaccttttgtcc 34576612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29833977 - 29834046
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29833977 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 29834046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10911466 - 10911536
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 71  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  10911466 atataacttttctttgagaatattagagtgtttctctattttatctacctttccttttgtccctgagccaa 10911536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13011812 - 13011881
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  13011812 atataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgttcctgagcca 13011881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29833145 - 29833076
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  29833145 atataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccctgagcca 29833076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10909222 - 10909292
Alignment:
Q  1 atataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10909222 atataacttttcgtttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 10909292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8933618 - 8933549
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8933618 atataacttttctttgaaaatattagagtgtttctctattttctctaccttttcttttgtccctgagcca 8933549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 2403897 - 2403835
Alignment:
Q  8 ttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2403897 ttttctttgagaatattagagagtttctctattttctctacctttccttttgtccctgagcca 2403835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 734646 - 734579
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| |||||||||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  734646 atataacttttccttgagaatattag--tgtttctctattttctctacctttccttttgtccctgagcca 734579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 2410019 - 2409957
Alignment:
Q  8 ttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||    
T  2410019 ttttctttgagaatattatagagtttctctattttctctacctttccttttgtccctgagcca 2409957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24519222 - 24519151
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaa 72  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24519222 atataacttttcttagagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaaa 24519151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4877107 - 4877176
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4877107 atataacttttccttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 4877176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4879435 - 4879504
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4879435 atataacttttccttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 4879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36379535 - 36379465
Alignment:
Q  1 atataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36379535 atataacttttcctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 36379465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21268190 - 21268120
Alignment:
Q  1 atataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  21268190 atataacttttcctttgagaatattagagtgtttctctattttctctaccttttcttttgtccctgagcca 21268120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 36377250 - 36377180
Alignment:
Q  1 atataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 71  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  36377250 atataacttttcctttgagaatattagagtgtttctctattttctctacctttcc-tttgtccttgagccaa 36377180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1732 - 1801
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1732 atataacttttctttgaggatattagagtgtttctctattttctctacctttccttttgtccctgagcca 1801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 88462 - 88531
Alignment:
Q  1 atataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  88462 atataacttttctttgagaatattagagtctttctctattttctctacctttccttttgtccctgagcca 88531  T

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Target: scaffold1361 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1361
Description:

Target: scaffold1361; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 70 - 140
Alignment:
Q  1 atataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  70 atataacttttcgtttgagaatattaaagtgtttctctattttctctacctttccttttgtccctgagcca 140  T

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Target: scaffold0098 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3768 - 3707
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  3768 tttctttgagaatattagagagttactctattttctctacctttccttttgtccctgagcca 3707  T

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Target: scaffold0050 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 29453 - 29514
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  29453 tttctttgagaacattagagagtttctctattttctctacctttccttttgtccctgagcca 29514  T

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Target: scaffold0050; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 31768 - 31829
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 70  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  31768 tttctttgagaacattagagagtttctctattttctctacctttccttttgtccttgagcca 31829  T

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Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 20642300 - 20642359
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagc 68  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| ||||||||||||||    
T  20642300 tttctttgagaatattagagaatttctctattttctctacctttcattttgtccctgagc 20642359  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 64082 - 64144
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaat 73  Q
    ||||||||||||||||  || ||||||| ||||||| |||||||| ||||||| |||| ||||||    
T  64082 tttctttgagaatatt--agggtttctctattttctttacctttcattttgtctctgatccaaat 64144  T

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Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 71414 - 71476
Alignment:
Q  9 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaat 73  Q
    ||||||||||||||||  || ||||||| ||||||| |||||||| ||||||| |||| ||||||    
T  71414 tttctttgagaatatt--agggtttctctattttctttacctttcattttgtctctgatccaaat 71476  T

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