View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16283_low_1 (Length: 514)
Name: NF16283_low_1
Description: NF16283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16283_low_1 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 429; Significance: 0; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 5 - 441
Target Start/End: Original strand, 2865283 - 2865719
Alignment:
| Q |
5 |
ccaattcttgtttatctttccctgccaccagttgagctttctcaccctttttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaat |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2865283 |
ccaattcttgtttatctttccctgccaccagttgagctttctcaccctttttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaat |
2865382 |
T |
 |
| Q |
105 |
caaattcttcaagcaagcctcaacatcttcggtggtcgactttggcatcaaattctcggcaacatcagcaggtgacatattagtctctcccaacaacttt |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
2865383 |
caaattcttcaagcaagcctcaacatcttcggtggtcgactttggcatcaaattctcggcaacatcagctggtgacatattagtctctcccaacaacttt |
2865482 |
T |
 |
| Q |
205 |
tcaataattggaaacaaatcaccatgagactcaacatccaagtagttcttagcaagaaccttgaacgcttgatatctacaataggacatttctatgtgtt |
304 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2865483 |
tcaataattggaaacaaatcaccatgagactcaacatccaagtagttcttagcaagaaccttgaatgcttgatatctacaataggacatttctatgtgtt |
2865582 |
T |
 |
| Q |
305 |
tatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaattagttgtgaaaattatgatccgttctcctccacatgatgaccaaattcc |
404 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2865583 |
tatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaattagttgtgaaaattatgatccgttctcctccacatgatgaccaaattcc |
2865682 |
T |
 |
| Q |
405 |
atcaatagaattcaacaaacccgaaagagttacattg |
441 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2865683 |
atcaatagaattcaacaaacccgaaagagttacattg |
2865719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 5 - 437
Target Start/End: Original strand, 2859898 - 2860330
Alignment:
| Q |
5 |
ccaattcttgtttatctttccctgccaccagttgagctttctcaccctttttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaat |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2859898 |
ccaattcttgtttatctttccctgccaccagttgagctttctcaccctttttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaat |
2859997 |
T |
 |
| Q |
105 |
caaattcttcaagcaagcctcaacatcttcggtggtcgactttggcatcaaattctcggcaacatcagcaggtgacatattagtctctcccaacaacttt |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
2859998 |
caaattcttcaagcaagcctcaacatcttcggtggtcgactttggcatcaaattctcggcaacatcagctggtgacatattagtctctcccaacaacttt |
2860097 |
T |
 |
| Q |
205 |
tcaataattggaaacaaatcaccatgagactcaacatccaagtagttcttagcaagaaccttgaacgcttgatatctacaataggacatttctatgtgtt |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
2860098 |
tcaataattggaaacaaatcaccatgagactcaacatccaagtagttcttagcaagaaccttgaacgcttgatagctacaataggacatttctatgtgtt |
2860197 |
T |
 |
| Q |
305 |
tatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaattagttgtgaaaattatgatccgttctcctccacatgatgaccaaattcc |
404 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2860198 |
tatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaattagttgtgaaaattatgatccgttctcctccacatgatgaccaaattcc |
2860297 |
T |
 |
| Q |
405 |
atcaatagaattcaacaaacccgaaagagttac |
437 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
2860298 |
atcaatagaattcaacaaacccgaaagagttac |
2860330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 5 - 441
Target Start/End: Original strand, 2884473 - 2884909
Alignment:
| Q |
5 |
ccaattcttgtttatctttccctgccaccagttgagctttctcaccctttttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaat |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2884473 |
ccaattcttgtttatctttccctgccaccagttgagctttctcaccgtttttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaat |
2884572 |
T |
 |
| Q |
105 |
caaattcttcaagcaagcctcaacatcttcggtggtcgactttggcatcaaattctcggcaacatcagcaggtgacatattagtctctcccaacaacttt |
204 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2884573 |
caaattcttcaagcaagactcagcatcttcggtggtcgactttggcatcaaattctcggcaacatcagcaggtgacatattagtctctcccaacaacttt |
2884672 |
T |
 |
| Q |
205 |
tcaataattggaaacaaatcaccatgagactcaacatccaagtagttcttagcaagaaccttgaacgcttgatatctacaataggacatttctatgtgtt |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2884673 |
tcaataattggaaacaaatcaccatgagactcaacatccaagtagttcttagcaagaaccttgaacgcttgatatctacaataggacatttctatgtgtt |
2884772 |
T |
 |
| Q |
305 |
tatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaattagttgtgaaaattatgatccgttctcctccacatgatgaccaaattcc |
404 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2884773 |
tatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaattagttgtgaaaattatgatccgttctcctccacatgatgaccaaattcc |
2884872 |
T |
 |
| Q |
405 |
atcaatagaattcaacaaacccgaaagagttacattg |
441 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2884873 |
atcaatagaattcaacaaacccgaaagagttacattg |
2884909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 5 - 429
Target Start/End: Original strand, 2909341 - 2909764
Alignment:
| Q |
5 |
ccaattcttgtttatctttccctgccaccagttgagctttctcaccctttttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaat |
104 |
Q |
| |
|
|||||| |||||||||||| |||| |||||||||||| ||| |||||||||||| ||||||| |||||||| ||||| ||| |||||| ||||||| |
|
|
| T |
2909341 |
ccaattgttgtttatctttatctgctttcagttgagctttttcagtctttttctttgcatcctccttttcctttttctttgaaatctcaagagattgaat |
2909440 |
T |
 |
| Q |
105 |
caaattcttcaagcaagcctcaacatcttcggtggtcgactttggcatcaaattctcggcaacatcagcaggtgacatattagtctctcccaacaacttt |
204 |
Q |
| |
|
||||||||||| ||||| |||||||||||| || ||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
2909441 |
caaattcttcacgcaagtctcaacatcttcaatgatcgtctttggcatcaaattctcagcaacatcagcaggtgtcatattagtctctcccaacaacttt |
2909540 |
T |
 |
| Q |
205 |
tcaataattggaaacaaatcaccatgagactcaacatccaagtagttcttagcaagaaccttgaacgcttgatatctacaataggacatttctatgtgtt |
304 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| | ||||||| ||||||| ||||||||||||||||| ||||| |
|
|
| T |
2909541 |
tcaataattggaaacaaatcatcatgagactcaacatctaagtagttctttgcaagcatcttgaacacttgatagctacaataggacatttcaatgtgca |
2909640 |
T |
 |
| Q |
305 |
tatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaattagttgtgaaaattatgatccgttctcctccacatgatgaccaaattcc |
404 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
2909641 |
tatccatccttcccctccttataagagcaggatcaagtttgtccacaaaattagttgtg-aaattatgatcctttctcctccacatgttgaccaaattcc |
2909739 |
T |
 |
| Q |
405 |
atcaatagaattcaacaaacccgaa |
429 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
2909740 |
atcaataaaattcaacaaacccgaa |
2909764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 51 - 437
Target Start/End: Original strand, 2832680 - 2833066
Alignment:
| Q |
51 |
ctttttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaatcaaattcttcaagcaagcctcaacatcttcggtggtcgactttggc |
150 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||| |||| |||||| ||| | ||||||||| |
|
|
| T |
2832680 |
ctttttctttgcttcctcctcatcctttttctttgcaatctcaagagattgaatcaaattcttcaagcaactttcaaaatcttcagtgattgactttggc |
2832779 |
T |
 |
| Q |
151 |
atcaaattctcggcaacatcagcaggtgacatattagtctctcccaacaacttttcaataattggaaacaaatcaccatgagactcaacatccaagtagt |
250 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |
|
|
| T |
2832780 |
atcaaattctcagcaacatcagcaggtgtcatattagtctctcccaacaacttttcaataattggaaacaaatcatcatgagtctcaacatctaagtagt |
2832879 |
T |
 |
| Q |
251 |
tcttagcaagaaccttgaacgcttgatatctacaataggacatttctatgtgtttatccatccttcccctcctaattagagcaggatcaagtttgtccac |
350 |
Q |
| |
|
| | |||||||||||||| |||||||| |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
2832880 |
ttcttgcaagaaccttgaaagcttgatagctacaataagacatttctatatgcttatccattcttcccctccttataagagcaggatcaagtttgtccac |
2832979 |
T |
 |
| Q |
351 |
aaaattagttgtgaaaattatgatccgttctcctccacatgatgaccaaattccatcaatagaattcaacaaacccgaaagagttac |
437 |
Q |
| |
|
|||||| |||||||||||||| |||| ||| |||||||| |||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
2832980 |
aaaatttgttgtgaaaattattatcctctctgatccacatgctgaccaaattccatcaatgaaattcaacaaaccagaaagagttac |
2833066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 51 - 437
Target Start/End: Complemental strand, 2842940 - 2842554
Alignment:
| Q |
51 |
ctttttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaatcaaattcttcaagcaagcctcaacatcttcggtggtcgactttggc |
150 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||| |||| |||||| ||| | ||||||||| |
|
|
| T |
2842940 |
ctttttctttgcttcctcctcatcctttttctttgcaatctcaagagattgaatcaaattcttcaagcaactttcaaaatcttcagtgattgactttggc |
2842841 |
T |
 |
| Q |
151 |
atcaaattctcggcaacatcagcaggtgacatattagtctctcccaacaacttttcaataattggaaacaaatcaccatgagactcaacatccaagtagt |
250 |
Q |
| |
|
|||||||| || |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||| |
|
|
| T |
2842840 |
atcaaattttcagcaacatcagcaggtgtcatattagtctcttccaacaacttttcaataattggaaataaatcatcatgaaactcaacatctaagtagt |
2842741 |
T |
 |
| Q |
251 |
tcttagcaagaaccttgaacgcttgatatctacaataggacatttctatgtgtttatccatccttcccctcctaattagagcaggatcaagtttgtccac |
350 |
Q |
| |
|
| | ||||||||||| || |||||||| |||||||| ||||||||||| || |||||||| ||||| ||||| || ||||||||||||||||| ||||| |
|
|
| T |
2842740 |
ttcttgcaagaaccttaaaagcttgatagctacaataagacatttctatatgcttatccattcttcctctccttataagagcaggatcaagtttatccac |
2842641 |
T |
 |
| Q |
351 |
aaaattagttgtgaaaattatgatccgttctcctccacatgatgaccaaattccatcaatagaattcaacaaacccgaaagagttac |
437 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
2842640 |
aaaattagttgtgaaaattatgatcctctctgatccacatgctgaccaaattccatcaataaaattcaacaaacccgaaagagttac |
2842554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 51 - 437
Target Start/End: Complemental strand, 2829534 - 2829148
Alignment:
| Q |
51 |
ctttttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaatcaaattcttcaagcaagcctcaacatcttcggtggtcgactttggc |
150 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||| | |||||| ||||||||||| ||||||| |||| |||| |||||| | ||||||||| |
|
|
| T |
2829534 |
ctttttctttgcttcctcctcatcctttttctttgcattctcaagagattgaatcaaactcttcaaacaagtttcaaaatcttcatcaattgactttggc |
2829435 |
T |
 |
| Q |
151 |
atcaaattctcggcaacatcagcaggtgacatattagtctctcccaacaacttttcaataattggaaacaaatcaccatgagactcaacatccaagtagt |
250 |
Q |
| |
|
|||||||| || |||||||||||||||| ||||||||||| | ||||||| ||||||||||||||||| |||||| ||||||||||||||||| | |||| |
|
|
| T |
2829434 |
atcaaattttcagcaacatcagcaggtgtcatattagtcttttccaacaatttttcaataattggaaataaatcatcatgagactcaacatcccaatagt |
2829335 |
T |
 |
| Q |
251 |
tcttagcaagaaccttgaacgcttgatatctacaataggacatttctatgtgtttatccatccttcccctcctaattagagcaggatcaagtttgtccac |
350 |
Q |
| |
|
|||| ||||| |||||||| |||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
2829334 |
tctttgcaagcaccttgaaagcttgatagctacaataagacatttctatatgcttatccatccttcccctcctaattagggcaggatcaagtttgtccac |
2829235 |
T |
 |
| Q |
351 |
aaaattagttgtgaaaattatgatccgttctcctccacatgatgaccaaattccatcaatagaattcaacaaacccgaaagagttac |
437 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
2829234 |
aaaatttgttgtgaaaattatgatcctctctcctccacatgcagaccaaatcccatcaataaaattcaacaaaccagaaagagttac |
2829148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 52 - 437
Target Start/End: Complemental strand, 14578644 - 14578259
Alignment:
| Q |
52 |
tttttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaatcaaattcttcaagcaagcctcaacatcttcggtggtcgactttggca |
151 |
Q |
| |
|
|||| |||||||| ||| | | |||||| ||||||| | |||||| |||||||||||||||||||||||| |||| |||||| | | || ||||||| |
|
|
| T |
14578644 |
ttttcctttgctttctcatgtgcctttttctttgcattctcaagagattgaatcaaattcttcaagcaagtttcaagatcttcagcaattgattttggca |
14578545 |
T |
 |
| Q |
152 |
tcaaattctcggcaacatcagcaggtgacatattagtctctcccaacaacttttcaataattggaaacaaatcaccatgagactcaacatccaagtagtt |
251 |
Q |
| |
|
||||||| || |||||||| ||||||| |||||||||||||| | |||||||||||||||||||||||| || ||||||||||||||||| | || || |
|
|
| T |
14578544 |
tcaaattttcagcaacatctgcaggtgttatattagtctctcctattaacttttcaataattggaaacaaaccatcatgagactcaacatcccaataatt |
14578445 |
T |
 |
| Q |
252 |
cttagcaagaaccttgaacgcttgatatctacaataggacatttctatgtgtttatccatccttcccctcctaattagagcaggatcaagtttgtccaca |
351 |
Q |
| |
|
||| ||||| || ||||| |||| ||| |||||||| |||||||| || || |||||||||||||||||||||| |||||| |||||||||| |||||| |
|
|
| T |
14578444 |
ctttgcaagcactttgaatgcttcatagctacaatatgacatttcaatatgcatatccatccttcccctcctaataagagcatgatcaagtttatccaca |
14578345 |
T |
 |
| Q |
352 |
aaattagttgtgaaaattatgatccgttctcctccacatgatgaccaaattccatcaatagaattcaacaaacccgaaagagttac |
437 |
Q |
| |
|
|| || ||||||||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||| |
|
|
| T |
14578344 |
aagttggttgtgaaaattatgatcctttctcctccacatgccgaccaaattccatcgataaaattcaacaaaccagaaagagttac |
14578259 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 99 - 425
Target Start/End: Complemental strand, 1801475 - 1801152
Alignment:
| Q |
99 |
ttgaatcaaattcttcaagcaagcctcaacatcttcggtggtcgactttggcatcaaattctcggcaacatcagcaggtgacatattagtctctcccaac |
198 |
Q |
| |
|
|||||||||||||||||| | || ||| |||||||| | ||||| |||||||||||||| |||||||||||||||| ||||||| | || ||||| |
|
|
| T |
1801475 |
ttgaatcaaattcttcaaactagtctcgacatcttcattcacagacttaggcatcaaattctcagcaacatcagcaggtgtcatattaataacttccaac |
1801376 |
T |
 |
| Q |
199 |
aacttttcaataattggaaacaaatcaccatgagactcaacatccaagtagttcttagcaagaaccttgaacgcttgatatctacaataggacatttcta |
298 |
Q |
| |
|
|| | |||| |||||||| | || ||||||| |||||| || |||||| |||||||||| || |||| | | | |||||| || | || | |
|
|
| T |
1801375 |
aaatcaccaatttcatcaaacaaataa---tgtgactcaatatccaaataattcttaacaagaaccttaaaagcttcaaaacaacaataagataactcaa |
1801279 |
T |
 |
| Q |
299 |
tgtgtttatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaattagttgtgaaaattatgatccgttctcctccacatgatgacca |
398 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||| ||||||||||| ||||||||||| || ||||||||||| |||| || |||||||| | ||||| |
|
|
| T |
1801278 |
cgtgtttatccatccttcctgtcctaataagagctggatcaagtttctccacaaaattcgtcgtgaaaattataatcctctcccctccacacgcggacca |
1801179 |
T |
 |
| Q |
399 |
aattccatcaatagaattcaacaaacc |
425 |
Q |
| |
|
||||||||||||| ||||||| ||||| |
|
|
| T |
1801178 |
aattccatcaataaaattcaataaacc |
1801152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 6318587 - 6318517
Alignment:
| Q |
271 |
gcttgatatctacaataggacatttctatgtgtttatccatccttcccctcctaattagagcaggatcaag |
341 |
Q |
| |
|
|||||||| |||||||| ||||||||||||| |||||||||||||||||||| || |||||||||||||| |
|
|
| T |
6318587 |
gcttgatagctacaataagacatttctatgttcttatccatccttcccctcctgatgagagcaggatcaag |
6318517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 419
Target Start/End: Complemental strand, 44396558 - 44396419
Alignment:
| Q |
280 |
ctacaataggacatttctatgtgtttatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaattagttgtgaaaattatgatccgtt |
379 |
Q |
| |
|
|||||||| || | ||| || ||||| ||||| || |||||||| || || ||||||||||| || |||||| |||| |||||||||| || | || || |
|
|
| T |
44396558 |
ctacaataagaaagttcaatatgtttgtccattctacccctccttataagtgcaggatcaagcttctccacataatttgttgtgaaaacaattaaccttt |
44396459 |
T |
 |
| Q |
380 |
ctcctccacatgatgaccaaattccatcaatagaattcaa |
419 |
Q |
| |
|
| |||||||| | |||||| || |||||||| ||||||| |
|
|
| T |
44396458 |
cacctccacaagctgaccatataccatcaatgaaattcaa |
44396419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 2178251 - 2178195
Alignment:
| Q |
144 |
ctttggcatcaaattctcggcaacatcagcaggtgacatattagtctctcccaacaa |
200 |
Q |
| |
|
||||||||||||||| || ||||||||||| |||| ||||||||||||| ||||||| |
|
|
| T |
2178251 |
ctttggcatcaaattttcagcaacatcagctggtgtcatattagtctctaccaacaa |
2178195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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