View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16284_high_14 (Length: 252)
Name: NF16284_high_14
Description: NF16284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16284_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 11 - 234
Target Start/End: Original strand, 10067216 - 10067439
Alignment:
| Q |
11 |
cagcacagataggaatcatcaaagaatggagtattcttcaaccgtctgcgccaacaccgcaactctgattctattgaaaacaaataccaaaatgctccaa |
110 |
Q |
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| T |
10067216 |
cagctcagataggaatcatcaaagaacggagtattcttcaaccgtctgcgccaacaccgcaactctgattctattgaaaacaaataccaaaatgctccaa |
10067315 |
T |
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| Q |
111 |
caacctaatatcacaaataatttggattttttatcataaaacttagcttatagtaacaaggaacatacataaactaatgcttgtgacagaagtaacaaaa |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10067316 |
caacctaatatcacaaataatttggattttttatcataaaacttagcttatagtaacaaggaacatacataaactaatgcttgtgacagaagtaacaaaa |
10067415 |
T |
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| Q |
211 |
ttacaagcttacatgacttgctag |
234 |
Q |
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|||||||||||||||||||||||| |
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| T |
10067416 |
ttacaagcttacatgacttgctag |
10067439 |
T |
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