View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16286_low_2 (Length: 330)
Name: NF16286_low_2
Description: NF16286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16286_low_2 |
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Alignment Details
Target: chr4 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 19 - 318
Target Start/End: Complemental strand, 11016553 - 11016254
Alignment:
| Q |
19 |
atttagcaatagtgtgaacaacaaaaggcaaaacacgaggagcaatatcattagagtaaggatccataggtttagatttagcttctttgatcattttaac |
118 |
Q |
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| T |
11016553 |
atttagcaatagtatgaacaacaaaaggcaaaacacgaggagcaatatcattagagtaaggatccataggtttagacttagcttctttgatcattttaac |
11016454 |
T |
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| Q |
119 |
catatctctaatatctccaaccatgagtctatatgaatttcctttcagaccttgttgtttgagacgtttctctatcctttttggtgtgaaccaaatccaa |
218 |
Q |
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| T |
11016453 |
catatctctaatatctccaaccatgagtctatatgaatttccttttagaccttgttgtttgagacgtttctctatcctttttggtgtgaaccaaatccaa |
11016354 |
T |
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| Q |
219 |
tccagtgcactccaaatccaccatatcaacactgaactaatcacagtgatgattgcaacttttgttggctgcaaatttaatgatgataataatgttccta |
318 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11016353 |
tccagtgcactccaaatccaccatatcaacactgaagtaatcacagtgatgattgcaacttttgttggctgcaaatttaatgatgataataatgttccta |
11016254 |
T |
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